Miyakogusa Predicted Gene

Lj1g3v2809400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2809400.1 Non Chatacterized Hit- tr|G7KQL6|G7KQL6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.43,0,seg,NULL,CUFF.29534.1
         (613 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16520.1 | Symbols:  | unknown protein; Has 25 Blast hits to ...   714   0.0  

>AT5G16520.1 | Symbols:  | unknown protein; Has 25 Blast hits to 25
           proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr5:5394740-5397371 REVERSE LENGTH=608
          Length = 608

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/608 (58%), Positives = 436/608 (71%), Gaps = 21/608 (3%)

Query: 3   SCPANSITYNGTLCACAPGFVLDAVARRCTLFVANSTITTDSGVDYYAFKLPKTLAEFDT 62
           +CP NSITYN T CAC  G +L+  +  C +F   STI+TD  V+Y      +TL  FD 
Sbjct: 2   ACPRNSITYNATRCACGIGQLLNRSSGSCEIFGWPSTISTDKDVNYSVISFAETLFAFDR 61

Query: 63  IKKFTQSQAVFLEATLVMLLSWLVFCLFLRFMKLGDGRGLWFNIRWCISRLDVCFATRHW 122
           I+KFTQSQA+FLEATLVMLLSWLVFC FLRF KLGDGR +WFN+RW I+RLDV F+TRHW
Sbjct: 62  IRKFTQSQAIFLEATLVMLLSWLVFCFFLRFTKLGDGRNVWFNLRWWITRLDVFFSTRHW 121

Query: 123 LDDQKVVTKRKTELGGAFSIASWILFIGLFAALLYQIISKRSIEVHNVRATNGLELTSFI 182
           LDDQ++V KRKTELGG FS+ASWI+FIGLFAALLYQII+KR+IEVHNVRAT   +L SF 
Sbjct: 122 LDDQQIVKKRKTELGGTFSVASWIVFIGLFAALLYQIITKRTIEVHNVRATGSPDLISFE 181

Query: 183 NDMEFNITTVSSMSCANLRDLGNLVVGNPGFIDERVVSLSTFGNYSCHNSSKGPTIALKC 242
           ND+EFNIT VS MSC+NLR +GN+V+GNPGF + +V +LS+ G+Y+C N++ GPT+  KC
Sbjct: 182 NDLEFNITAVSDMSCSNLRGIGNVVMGNPGFSEFKVAALSSLGSYTCKNTTSGPTVNFKC 241

Query: 243 QNCKAIHDHMYISWKFVDLPNSPATAVGFEFNLTSMDNA-KKHMSFVNGTLKNGSAFDDG 301
             C+  +D++YISW FVDLP+SPA AVGF+FN TS +   +KHMSFV+GTL+NGS  D+ 
Sbjct: 242 TKCRLTNDYIYISWHFVDLPDSPAAAVGFQFNFTSKNGPNEKHMSFVSGTLRNGSILDES 301

Query: 302 LVTFRGRETNIMKFNLFPRIYRNLHDLKLIQPLFHEFLPGSVSRDTKQLQASLENSVDGL 361
            VTFRG E NI+KFNLFPRIY +LHDLKLIQPLFHEF+PGSV RDT QLQAS+  S DG+
Sbjct: 302 PVTFRGTEGNILKFNLFPRIYHHLHDLKLIQPLFHEFIPGSVYRDTTQLQASMGRSTDGI 361

Query: 362 VNTTLYINFLSDYVVEVEKENILGPVSFLADLGGLYCISIGIFFYLLVQCEYRIKKLRNE 421
           +NTTL+IN+LS Y+VE++ ENILGPVSFLADLGGLYCISIGIFFYLLVQCEYRIKKLRNE
Sbjct: 362 LNTTLFINYLSAYIVEIDHENILGPVSFLADLGGLYCISIGIFFYLLVQCEYRIKKLRNE 421

Query: 422 DSILRAIRNRRKAQDHWDKLRKYVMYTYGCPT-IDDNNNESRNESCCGGIMLHSVHXXXX 480
           D++ R IRNRRKA DHWDKLR+YV YT+ C   +DD    ++    CG            
Sbjct: 422 DTVFRKIRNRRKALDHWDKLRRYVAYTWDCSILVDDAIKTTKVSGMCG--------LTRP 473

Query: 481 XXXXXXXXXXXXLNLHKKPSVPASKSLSCKPLGSTNDLKPQHEQMEKQKNVGPHKDL--P 538
                       +  +KKP++   K++  +P             +    N    K +  P
Sbjct: 474 PTSSNSSEHGESIMANKKPNLGIEKNVISQPASLELSSFDSASSLAHGDNFSNKKSITHP 533

Query: 539 QSQHQESSIIDDNFIPPPPSLE---CKSGSEMDISDIQKNLKNLYEYNAMLREKLLATQS 595
            S  ++ S      IPPPP +E     SGSE+D  DI+   + LY+YN +LREKLL TQS
Sbjct: 534 ISHSEDVS------IPPPPPMEFIDGSSGSEVDAMDIKNKFQLLYDYNVLLREKLLETQS 587

Query: 596 QLRSSSSK 603
            L + + K
Sbjct: 588 LLNTLAPK 595