Miyakogusa Predicted Gene

Lj1g3v2809360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2809360.1 tr|H2CJV5|H2CJV5_9LEPT HAD-superfamily hydrolase,
subfamily IA, variant 3 OS=Leptonema illini DSM
21,31.71,0.0000000000002,HAD-SF-IA-v3: HAD hydrolase, family IA,
variant 3,HAD-superfamily hydrolase, subfamily IA, variant
3,CUFF.29529.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79790.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   298   2e-81
AT1G79790.2 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   229   2e-60

>AT1G79790.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr1:30016987-30018186
           REVERSE LENGTH=245
          Length = 245

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 132/201 (65%), Positives = 166/201 (82%)

Query: 52  TTNRKLPILLFDIMDTLVRDPFYEDVPAFFGMSFKELIDCKHPTAWLEFEKGSIDEMELA 111
           +  RKLPILLFD+MDT+VRDPFY+DVPAFFGM  K+L++CKHP  W+EFEKG IDE ELA
Sbjct: 42  SRKRKLPILLFDVMDTIVRDPFYQDVPAFFGMPMKQLLECKHPMVWIEFEKGLIDEEELA 101

Query: 112 RIFFKDGRDFDLEGLKTCMRNGYSYIDGIEQLLFTLKQNNFEMHAFTNYPTWYQLIEDKL 171
           R FF DGRDFDLEGLK CMR+GYSY+DG+++LL TL  ++FE+HAFTNYP WY +IEDKL
Sbjct: 102 RNFFIDGRDFDLEGLKECMRSGYSYLDGMQELLQTLAADDFEIHAFTNYPIWYNIIEDKL 161

Query: 172 KLSTYLSWTFCSCTHGKRKPDTEFYMEALRHLKVDPASCIFVDDRKRNVEAATEVGIRGV 231
           KLS YLSWTFCSC  GKRKPD EFY+E + HL V+P  CIF+DDR  NV+ A E+G+ G+
Sbjct: 162 KLSAYLSWTFCSCIAGKRKPDPEFYLEVVGHLGVEPCDCIFIDDRPTNVKCAIEIGMGGL 221

Query: 232 QFKNVNLLREELSLMGVDISI 252
            F+N + L ++LS +G+++S+
Sbjct: 222 CFENADSLAKDLSDLGINVSV 242


>AT1G79790.2 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr1:30016987-30017904
           REVERSE LENGTH=198
          Length = 198

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 107/195 (54%), Positives = 137/195 (70%), Gaps = 25/195 (12%)

Query: 83  MSFKELIDCKHPTAWLEFEKGSIDEMELARIFFKDGRDFDLEGLKTCMRNGYSYIDGIEQ 142
           M  K+L++CKHP  W+EFEKG IDE ELAR FF DGRDFDLEGLK CMR+GYSY+DG+++
Sbjct: 1   MPMKQLLECKHPMVWIEFEKGLIDEEELARNFFIDGRDFDLEGLKECMRSGYSYLDGMQE 60

Query: 143 LLFTLKQNNFEMHAFTNYPTW-------------------------YQLIEDKLKLSTYL 177
           LL TL  ++FE+HAFTNYP W                         Y +IEDKLKLS YL
Sbjct: 61  LLQTLAADDFEIHAFTNYPIWFPSLAFHSLKRSFMSLCLLLSCFHRYNIIEDKLKLSAYL 120

Query: 178 SWTFCSCTHGKRKPDTEFYMEALRHLKVDPASCIFVDDRKRNVEAATEVGIRGVQFKNVN 237
           SWTFCSC  GKRKPD EFY+E + HL V+P  CIF+DDR  NV+ A E+G+ G+ F+N +
Sbjct: 121 SWTFCSCIAGKRKPDPEFYLEVVGHLGVEPCDCIFIDDRPTNVKCAIEIGMGGLCFENAD 180

Query: 238 LLREELSLMGVDISI 252
            L ++LS +G+++S+
Sbjct: 181 SLAKDLSDLGINVSV 195