Miyakogusa Predicted Gene

Lj1g3v2809160.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2809160.2 Non Chatacterized Hit- tr|I3SMN6|I3SMN6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.57,0,UPF0016,Uncharacterised protein family UPF0016;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised ,CUFF.29528.2
         (279 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G36290.2 | Symbols:  | Uncharacterized protein family (UPF001...   347   6e-96
AT5G36290.1 | Symbols:  | Uncharacterized protein family (UPF001...   347   6e-96
AT1G68650.1 | Symbols:  | Uncharacterized protein family (UPF001...   162   3e-40
AT1G25520.1 | Symbols:  | Uncharacterized protein family (UPF001...   159   2e-39
AT4G13590.1 | Symbols:  | Uncharacterized protein family (UPF001...   134   6e-32
AT4G13590.2 | Symbols:  | Uncharacterized protein family (UPF001...   134   8e-32
AT1G64150.1 | Symbols:  | Uncharacterized protein family (UPF001...    88   5e-18

>AT5G36290.2 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr5:14302977-14304972 FORWARD LENGTH=293
          Length = 293

 Score =  347 bits (890), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 186/286 (65%), Positives = 212/286 (74%), Gaps = 17/286 (5%)

Query: 11  TALAILLCFLFHLSPTLAQDSLAQ-------IGGSVDLGRRGKVMLHH---NASVISIG- 59
           T L ++    F +S    QDS+ +        G   +LGRRG V       +  V +IG 
Sbjct: 8   TRLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGTERIGVDTVVDNIGA 67

Query: 60  ------LDSTGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALII 113
                 LD+T   +FDA F+S SMILV+EIGDETFIIAALMAMRHPK+ VLSGALSAL +
Sbjct: 68  LGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFV 127

Query: 114 MTVLSTGLGRIVPNLISKKHTNSAATVLYAFFGLRLLYIAWRSSDSKTSQXXXXXXXXXX 173
           MT+LSTGLGRIVPNLIS+KHTNSAATVLYAFFGLRLLYIAWRS+DSK++Q          
Sbjct: 128 MTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEK 187

Query: 174 XXXXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATI 233
                  T         CTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GVA+GA+I
Sbjct: 188 LESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASI 247

Query: 234 GHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYPPL 279
           GHT+CTS+AVVGGSMLAS+ISQRTVATVGGLLFLGFSVSSY+YPPL
Sbjct: 248 GHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYPPL 293


>AT5G36290.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr5:14302977-14304972 FORWARD LENGTH=293
          Length = 293

 Score =  347 bits (890), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 186/286 (65%), Positives = 212/286 (74%), Gaps = 17/286 (5%)

Query: 11  TALAILLCFLFHLSPTLAQDSLAQ-------IGGSVDLGRRGKVMLHH---NASVISIG- 59
           T L ++    F +S    QDS+ +        G   +LGRRG V       +  V +IG 
Sbjct: 8   TRLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGTERIGVDTVVDNIGA 67

Query: 60  ------LDSTGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALII 113
                 LD+T   +FDA F+S SMILV+EIGDETFIIAALMAMRHPK+ VLSGALSAL +
Sbjct: 68  LGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFV 127

Query: 114 MTVLSTGLGRIVPNLISKKHTNSAATVLYAFFGLRLLYIAWRSSDSKTSQXXXXXXXXXX 173
           MT+LSTGLGRIVPNLIS+KHTNSAATVLYAFFGLRLLYIAWRS+DSK++Q          
Sbjct: 128 MTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEK 187

Query: 174 XXXXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATI 233
                  T         CTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GVA+GA+I
Sbjct: 188 LESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASI 247

Query: 234 GHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYPPL 279
           GHT+CTS+AVVGGSMLAS+ISQRTVATVGGLLFLGFSVSSY+YPPL
Sbjct: 248 GHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYPPL 293


>AT1G68650.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:25775825-25777683 FORWARD LENGTH=228
          Length = 228

 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 127/226 (56%), Gaps = 19/226 (8%)

Query: 67  LFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVP 126
           L   F  SL+M  +SEIGD+TF  AA++AMR+P+ +VL+G LSALI+MT+LS  LG   P
Sbjct: 4   LLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 127 NLISKKHTNSAATVLYAFFGLRLLYIAWRS---------------SDSKTSQXXXXXXXX 171
           NLIS+K T+   T L+  FGL  L+  ++                SD K +         
Sbjct: 64  NLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKNSKI 123

Query: 172 XXXXXXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGA 231
                               +PIFL++F + F  EWGD+SQ+ATI LA  +N LGV +G 
Sbjct: 124 EDEQKKQKRPFLTAFF----SPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGG 179

Query: 232 TIGHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYP 277
            +  T+CT+ AV+GG  LAS+IS+R VA  GG+LF+ F + S   P
Sbjct: 180 IVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTP 225


>AT1G25520.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:8962324-8964173 FORWARD LENGTH=230
          Length = 230

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 13/219 (5%)

Query: 69  DAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNL 128
             F  SL+M  VSEIGD+TF  AA++AMR+P+ +VL+G LSALI+MT+LS  LG   PNL
Sbjct: 6   QGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNL 65

Query: 129 ISKKHTNSAATVLYAFFGLRLLYIAWRSSDSKTS-------------QXXXXXXXXXXXX 175
           IS+K T+   T+L+  FGL  L+  ++     +              +            
Sbjct: 66  ISRKWTHHITTLLFFGFGLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPKDSSKR 125

Query: 176 XXXXXTXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGH 235
                           +PIFL++F + F  EWGD+SQ+ATI LA  +N  GV +G  +  
Sbjct: 126 EDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLGGVVAQ 185

Query: 236 TICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSY 274
            +CT+ AV+GG  LAS+IS+R VA  GG+LF+ F + SY
Sbjct: 186 FLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224


>AT4G13590.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr4:7901369-7903792 REVERSE LENGTH=359
          Length = 359

 Score =  134 bits (337), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 71  FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLIS 130
           F A+ S+I VSEIGD+TF IAAL+AM++ K++VL G++ AL +MT+LS  +G+I  ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205

Query: 131 KKHT-----NSAATVLYAFFGLRLLYIAWR--SSDSKTSQXXXXXXXXXXXXXXXXXTXX 183
           +  T       AA  L  FFGL+ +  AW     ++K  +                    
Sbjct: 206 QFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEELVKEKA 265

Query: 184 XXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSVAV 243
                     I  +SF L F AEWGDRS +AT+AL   ++ LGVA GA  GH + T +A+
Sbjct: 266 SKKLTNPLE-ILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAI 324

Query: 244 VGGSMLASKISQRTVATVGGLLFLGFSVSSYY 275
           +GG+ LA+ IS++ V  VGG LFL F+ ++++
Sbjct: 325 MGGAFLANYISEKLVGYVGGALFLVFAAATFF 356


>AT4G13590.2 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr4:7901369-7903792 REVERSE LENGTH=359
          Length = 359

 Score =  134 bits (337), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 71  FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLIS 130
           F A+ S+I VSEIGD+TF IAAL+AM++ K++VL G++ AL +MT+LS  +G+I  ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205

Query: 131 KKHT-----NSAATVLYAFFGLRLLYIAWR--SSDSKTSQXXXXXXXXXXXXXXXXXTXX 183
           +  T       AA  L  FFGL+ +  AW     ++K  +                    
Sbjct: 206 QFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEELVKEKA 265

Query: 184 XXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSVAV 243
                     I  +SF L F AEWGDRS +AT+AL   ++ LGVA GA  GH + T +A+
Sbjct: 266 SKKLTNPLE-ILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAI 324

Query: 244 VGGSMLASKISQRTVATVGGLLFLGFSVSSYY 275
           +GG+ LA+ IS++ V  VGG LFL F+ ++++
Sbjct: 325 MGGAFLANYISEKLVGYVGGALFLVFAAATFF 356


>AT1G64150.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:23809047-23812579 REVERSE LENGTH=370
          Length = 370

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 104/210 (49%), Gaps = 17/210 (8%)

Query: 71  FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGR------- 123
           F ++  +I  SE+GD+TF IAAL+A R+  + V  G   AL IMT++S  LGR       
Sbjct: 159 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDE 218

Query: 124 IVPNLISKKH---TNSAATVLYAFFGLRLLYIAWRSSDSKTSQXXXXXXXXXXXXXXXXX 180
           ++P           + AA  L  +FG+  L  A  S + K  +                 
Sbjct: 219 VLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAV-SDEGKADEEQKEAELAVSELSGNGA 277

Query: 181 TXXXXXXXXXCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTS 240
                      T      F L F+AEWGD+S  +TIALA   + LGV  GA  GH   T 
Sbjct: 278 GIVAAANTIIST------FALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATL 331

Query: 241 VAVVGGSMLASKISQRTVATVGGLLFLGFS 270
           +AV+GGS+L + +S++ +A VGG+LFL F+
Sbjct: 332 LAVLGGSLLGNFLSEKAIAYVGGVLFLVFA 361