Miyakogusa Predicted Gene

Lj1g3v2807700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2807700.1 tr|A4S6K9|A4S6K9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_36640,32.02,2e-17,coiled-coil,NULL; seg,NULL,CUFF.29501.1
         (520 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61570.1 | Symbols: GC3, GDAP1 | GRIP-related ARF-binding dom...   446   e-125
AT2G46180.1 | Symbols: GC4 | golgin candidate 4 | chr2:18967482-...   432   e-121

>AT3G61570.1 | Symbols: GC3, GDAP1 | GRIP-related ARF-binding
           domain-containing protein 1 | chr3:22779637-22783642
           REVERSE LENGTH=712
          Length = 712

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/502 (52%), Positives = 350/502 (69%), Gaps = 12/502 (2%)

Query: 16  NSNSQAKDKELADLAEGKNSLTAAVQVQHAHEIXXXXXXXXXXRDKLASIQLNFHEEQKL 75
           +++S  K+K+LAD+ E +    AAVQ   A E+          R+KL   QL+  EE+K 
Sbjct: 172 DTDSFIKEKDLADMLEDRTKSMAAVQ---ATELAKE-------REKLRDFQLSLQEERKR 221

Query: 76  NKSTQXXXXXXXXXRDKTTNEMKKLHNVLNEKVSEIKRLQLELTRREDEAAGDAVDSSKR 135
           ++S +         ++KT+ E+ K+ + L+ K+ EIK LQ++LT +E  A G  ++  K 
Sbjct: 222 SESFKEELESMRLDKNKTSMEISKMRSELDAKLLEIKHLQMKLTGQESHAIGPGMEHLKE 281

Query: 136 LIETLEKENTALKMEKNELEAALKASRMSFSQKMSPSASQIQNKEXXXXXXXXXXXXXFP 195
           + + LEKEN  LK++++ELEAAL+ SR   + K+ P A++   +              FP
Sbjct: 282 VNKALEKENNELKLKRSELEAALEESRKLTNSKVFPDATESLTRHPSTLDKEKPES--FP 339

Query: 196 GKEEMEISLQKLSKDLKETQREKDKAVQELTRLKQHXXXXXXXXXXXMDEDTKIIEELRD 255
           GKEEME SLQ+L  DLKETQRE+DKA QEL RLKQH           MDED+++IEELR 
Sbjct: 340 GKEEMEQSLQRLEMDLKETQRERDKARQELKRLKQHLLEKETEESEKMDEDSRLIEELRQ 399

Query: 256 RNNYLKDQISNLERALKQSTANQEKLKMENSNEILKSREIIDDLNKKLTNCMNTIDAKNT 315
            N Y + QIS+LE++LKQ+ +NQE  ++ N N+I K ++ +DDLN+KLTNC+ TI++KN 
Sbjct: 400 TNEYQRSQISHLEKSLKQAISNQEDNRLSNDNQIRKLKDTVDDLNQKLTNCLRTIESKNV 459

Query: 316 ELLNLQTALGQYYAEIEAKEYLEGELARAREETAKLSQLLKDADGRADVFRSEKEEIFAK 375
           ELLNLQTALGQYYAEIEAKE+ E ELA A++E  KLS  LKD+D R +    EKE++ +K
Sbjct: 460 ELLNLQTALGQYYAEIEAKEHFERELAMAKDELMKLSARLKDSDERLESSNKEKEDVTSK 519

Query: 376 LSQSEKVQSEWRSRVSKLEEENSRLRRALEQNMTRLNRMSVDSDFLVDRRIVIKLLVTYF 435
           L  +EKV +EW++RV+K+EE+N+++RR LEQ+MTRLNRMS++SD+LVDRRIVIKLLVTYF
Sbjct: 520 LLHAEKVAAEWKNRVTKVEEDNAKVRRVLEQSMTRLNRMSMESDYLVDRRIVIKLLVTYF 579

Query: 436 QRNHSKEVLDLMVRMLGFSNEDKERIGHAQQGPGKGVVRGVFGLPGRLVGGILXXXXXXX 495
           Q+NH+KEVLDLMVRMLGFS EDKERIG A+QG GKGVVRGV G PGR VGGIL       
Sbjct: 580 QKNHNKEVLDLMVRMLGFSEEDKERIGAAKQGGGKGVVRGVLGFPGRFVGGILGGKSAEL 639

Query: 496 XXXXXXXXQSFADLWVDFLLKE 517
                   QSFADLWVDFLLK+
Sbjct: 640 HANAASDNQSFADLWVDFLLKD 661


>AT2G46180.1 | Symbols: GC4 | golgin candidate 4 |
           chr2:18967482-18971260 REVERSE LENGTH=725
          Length = 725

 Score =  432 bits (1112), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/505 (50%), Positives = 348/505 (68%), Gaps = 15/505 (2%)

Query: 15  SNSNSQAKDKELADLAEGKNSLTAAVQVQHAHEIXXXXXXXXXXRDKLASIQLNFHEEQK 74
           ++S S  K+KE A++ E +    A+ Q   A E+          R+K A++Q+   EE+K
Sbjct: 176 NDSESHKKEKEFAEMLEERTRSMASAQ---ARELEKE-------REKSANLQILLQEERK 225

Query: 75  LNKSTQXXXXXXXXXRDKTTNEMKKLHNVLNEKVSEIKRLQLELTRREDEAAGDAVDSSK 134
            N++ +         ++KT  E  K+   L+ K++EI++LQ++L   E  A G + ++ K
Sbjct: 226 QNETFKEELQSLRLDKEKTLMESNKVRRELDAKLAEIRQLQMKLNGGEQHAFGISRENLK 285

Query: 135 RLIETLEKENTALKMEKNELEAALKASRMSFSQKMSPSASQIQNKEXXXXXXXXXXXXXF 194
            + + LEKEN  LK++++ELEAAL+AS+ S S+K+ P +++  ++              F
Sbjct: 286 EVNKALEKENNELKLKRSELEAALEASQKSTSRKLFPKSTEDLSRHLSSLDEEKAGT--F 343

Query: 195 PGKEEMEISLQKLSKDLKETQREKDKAVQELTRLKQHXXXXXXXXXXXMDEDTKIIEELR 254
           PGKE+ME SLQ+L K+L+E +REKDKA QEL RLKQH           MDED+++I+ELR
Sbjct: 344 PGKEDMEKSLQRLEKELEEARREKDKARQELKRLKQHLLEKETEESEKMDEDSRLIDELR 403

Query: 255 DRNNYLKDQISNLERALKQSTANQEKLKMENSNEILKSREIIDDLNKKLTNCMNTIDAKN 314
             N Y + QI  LE+AL+Q+ ANQE++K  +  EI KS+ II+DLN+KL NC+ TID+KN
Sbjct: 404 QTNEYQRSQILGLEKALRQTMANQEEIKSSSDLEIRKSKGIIEDLNQKLANCLRTIDSKN 463

Query: 315 TELLNLQTALGQYYAEIEAKEYLEGELARAREETAKLSQLLKDADGRADVFRSEKEEIFA 374
            ELLNLQTALGQYYAEIEAKE+ E ELA A+E+  KLS  LKD D + +  + EKEEI +
Sbjct: 464 VELLNLQTALGQYYAEIEAKEHFERELAVAKEDAMKLSARLKDVDEQLESSKKEKEEITS 523

Query: 375 KLSQSEKVQSEWRSRVSKLEEENSRLRRALEQNMTRLNRMSVDSDFLVDRRIVIKLLVTY 434
           K+  +E + +EW++RVSK+E++N+++RR LEQ+MTRLNRMS+DSDFLVDRRIVIKLLVTY
Sbjct: 524 KVLHAENIAAEWKNRVSKVEDDNAKVRRVLEQSMTRLNRMSMDSDFLVDRRIVIKLLVTY 583

Query: 435 FQRNHSKEVLDLMVRMLGFSNEDKERIGHAQQG-PGKGVVRGVFGLPGRLVGGILXXXXX 493
           FQRNHS+EVLDLMVRMLGFS E+K+RIG AQQG  GKGVVRGV G PGRLVGGIL     
Sbjct: 584 FQRNHSREVLDLMVRMLGFSEEEKQRIGLAQQGAAGKGVVRGVLGFPGRLVGGILGGGGG 643

Query: 494 XXXXXXXXXX--QSFADLWVDFLLK 516
                       QSFAD+WV+FLLK
Sbjct: 644 SPDSHPNMASDNQSFADMWVEFLLK 668