Miyakogusa Predicted Gene

Lj1g3v2776600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2776600.1 Non Chatacterized Hit- tr|I1LM70|I1LM70_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29466
PE,83.4,0,SPT16,FACT complex subunit Spt16p/Cdc68p;
Peptidase_M24,Peptidase M24, structural domain;
Creatinase,CUFF.29594.1
         (790 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10710.1 | Symbols: SPT16 | global transcription factor C | c...  1071   0.0  
AT4G10670.1 | Symbols: GTC2 | GTC2 | chr4:6584727-6585758 FORWAR...   291   1e-78

>AT4G10710.1 | Symbols: SPT16 | global transcription factor C |
           chr4:6602226-6605450 REVERSE LENGTH=1074
          Length = 1074

 Score = 1071 bits (2769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/785 (65%), Positives = 628/785 (80%), Gaps = 15/785 (1%)

Query: 1   MTDRRNGKSQTP-IGKSSAAGTLYSIDLNAFQSRLRTLYSHWDEHRTDLWGSSDAIAIAC 59
           M D RNG ++ P  G    AG  YSID+  F SR R LY HW +H  DLWGS+DA+AIA 
Sbjct: 1   MADSRNGNARAPPSGVPPKAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAIAT 60

Query: 60  PPPSEDLRYLKSTALNLWLLGFEFPETIMVFMKKQIHMLCSQKKASILESVKKPAREAVG 119
           PP S+DLRYLKS+ALN+WLLG+EFP+TIMVF KKQIH LCS+ KAS+LE VKKPA + + 
Sbjct: 61  PPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDEL- 119

Query: 120 VELEVVLHVKPKNEDGTALMDAIFLAIRAQSKSDGRDASTIGYISREAPEGKLLKAWAEK 179
            +L+V++HVKPK +DGT LMDAIF AIR  S+ DG D+  +G+I+REAPEGKLL+ W E+
Sbjct: 120 -KLDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTER 178

Query: 180 LKNSNFHLIDVANGLSTLFAVKSNEELTSIKRAAYLTTSVMKNFVVSKLENVIDEEKKVS 239
           LKN+NF  +D+  GLS LFAVK + E+ S+K+AAYL  SVMKN VV  LE+ IDEEK V+
Sbjct: 179 LKNANFQFVDITGGLSDLFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVT 238

Query: 240 HSTLMEETEKVVLEPSKVNCKLKAENVDICYPPIFQSEVGFDLRPSAVSNDDLLHYDTAS 299
           HS LM+ TEK +LEP+K + KLK ENVDICYPPIFQS   FDL+PSA SND+LL YD AS
Sbjct: 239 HSALMDLTEKAILEPTKASVKLKPENVDICYPPIFQSGGKFDLKPSAASNDELLTYDPAS 298

Query: 300 VIICAVGARYKSYCSNIARTFLIDADPLQSKAYEVLLKAQEAVICSLKPGNKLSVAYQAA 359
           +IICAVGARY SYCSN+ART+LIDA  LQSKAYEVLLKA EA I +L+ G K++  YQAA
Sbjct: 299 IIICAVGARYNSYCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINTVYQAA 358

Query: 360 VSVVEKDAPELISNLTKSAGTSIGIEFRESGLNLNAKNEQIIKEGMVFNVSLGMQNLQND 419
           +SVVEK+APE +  LTKSAGT IG+EFRESGLN+NAKN+++++  M FNVSLG QNL+ +
Sbjct: 359 LSVVEKNAPEFVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRPKMAFNVSLGFQNLECE 418

Query: 420 N-----SKLFSLLLADTIIINKDRTEVLTTMSSKALKDVAYSFKEDEEEEKQSTKADTNG 474
           +     +K FSLLLADT+++   + E+LT   SK++KDVAYSFKEDEEEEK   KA T+G
Sbjct: 419 SESRSKNKKFSLLLADTVLVTDQKPELLTK-CSKSVKDVAYSFKEDEEEEKPRKKARTSG 477

Query: 475 AEPIISKTTQRSDNHEISKEQLRRKHQAELARQKNEETARRLAGGGNATGDNRFSVRTTA 534
           +E  I+KT  RSD+H +SKE+LR++HQAELARQKNEETARRLAG  +  GD+R + +T+A
Sbjct: 478 SENYITKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTSA 537

Query: 535 DQVAYKNISELPLPPRERMIQIDQKNEAVLLPINGSMCPFHVAFIRTVSSKQDTNHNCCI 594
           D VAYKN+++  +P +E MIQ+D +NEAVLLPI GS+ PFHVA IRTVS  QDTN NC I
Sbjct: 538 DVVAYKNVND--MPHKELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYI 595

Query: 595 RILFNVPGT---PQDAISMKYPGSIYLKEASFRSEDSRHISEVLQSINKLRRQVVARESE 651
           RI+FNVPGT   P D+ S+K  G+IYLKE SFR++DSRH SEV Q I  LRRQV+ARESE
Sbjct: 596 RIIFNVPGTPFNPHDSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESE 655

Query: 652 RADRATLVTQEKLQLANNRFKPIRLPNLWIRPPFGGRGRKISGALEAHVNGFRYSTTRQD 711
           RA+RATLVTQEKLQLA N+FKP+RL  LWIRPPF GR +KI G LEAH NGFRYSTTR D
Sbjct: 656 RAERATLVTQEKLQLAGNKFKPLRLSELWIRPPFSGR-KKIPGTLEAHANGFRYSTTRPD 714

Query: 712 ERVDIMFSNIKHAFFQPAENEMITLVHFHLHNHIMVGSKKAKDVQFYVEVMDMVQNVGGG 771
           ERVD++F+NIKHAFFQPAE EMITL+HFHLHNHIMVG+KK KDVQFYVEVMD+VQ++GGG
Sbjct: 715 ERVDVLFANIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGG 774

Query: 772 ILCEY 776
               Y
Sbjct: 775 RRSAY 779


>AT4G10670.1 | Symbols: GTC2 | GTC2 | chr4:6584727-6585758 FORWARD
           LENGTH=343
          Length = 343

 Score =  291 bits (745), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 142/219 (64%), Positives = 173/219 (78%), Gaps = 9/219 (4%)

Query: 553 MIQIDQKNEAVLLPINGSMCPFHVAFIRTVSSKQDTNHNCCIRILFNVPGTPQDA-ISMK 611
           MI +D K++ VLLPI G M PF+V  IRTV   Q+T     IR++FNVPGTP +   S+K
Sbjct: 1   MITVDHKSDTVLLPIYGRMVPFNVTTIRTVLGNQNT-----IRVIFNVPGTPLNPNDSLK 55

Query: 612 YPGSIYLKEASFRSEDSRHISEVLQSINKLRRQVVARESERADRATLVTQEKLQLANNRF 671
              +IYLKE SFR++DSRH S+V+Q +  LRR+V+ARESERA+R +LV QEKLQ+  N  
Sbjct: 56  NKDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRNNS 115

Query: 672 KPIRLPNLWIRPPFGGRGRKISGALEAHVNGFRYSTTRQDERVDIMFSNIKHAFFQPAEN 731
           KP+ L NLWIRPPF GR +K  G LEAHVNGFRYSTT  +ERVD++F+NIKHAFFQPAE 
Sbjct: 116 KPLSLSNLWIRPPFSGR-KKNRGTLEAHVNGFRYSTT--NERVDVLFANIKHAFFQPAEK 172

Query: 732 EMITLVHFHLHNHIMVGSKKAKDVQFYVEVMDMVQNVGG 770
           EM TL+HFHLHNHIMVG+KK KDVQFYVEVMD+VQ++GG
Sbjct: 173 EMTTLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGG 211