Miyakogusa Predicted Gene

Lj1g3v2765520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2765520.1 Non Chatacterized Hit- tr|I3SAI5|I3SAI5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,41.52,3e-19,HMA,Heavy metal-associated domain, HMA;
UNCHARACTERIZED,NULL; COPPER TRANSPORT PROTEIN
ATOX1-RELATED,CUFF.29478.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01490.2 | Symbols:  | Heavy metal transport/detoxification s...    86   1e-17
AT1G01490.1 | Symbols:  | Heavy metal transport/detoxification s...    86   1e-17

>AT1G01490.2 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr1:180401-182066 REVERSE
          LENGTH=177
          Length = 177

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 51/69 (73%), Gaps = 1/69 (1%)

Query: 1  MKKFVLKLDLPDDKAKQKALKTVSTLPGIDAISMDMKEKKLXXXXXXXXXXXXSKLRKYW 60
          MKK VLKLDL DD+AKQKALKTVSTLPGID+I+MDMKEKKL            SKLRKYW
Sbjct: 1  MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 60

Query: 61 -QADLVSVG 68
             D+V VG
Sbjct: 61 PMTDIVLVG 69



 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/36 (77%), Positives = 32/36 (88%)

Query: 133 DPVLEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 168
           D VLE VKAY+ YNPH+TTYY+ QS+EENPNACVIC
Sbjct: 142 DHVLELVKAYKAYNPHLTTYYYAQSIEENPNACVIC 177


>AT1G01490.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr1:180401-182066 REVERSE
          LENGTH=177
          Length = 177

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 51/69 (73%), Gaps = 1/69 (1%)

Query: 1  MKKFVLKLDLPDDKAKQKALKTVSTLPGIDAISMDMKEKKLXXXXXXXXXXXXSKLRKYW 60
          MKK VLKLDL DD+AKQKALKTVSTLPGID+I+MDMKEKKL            SKLRKYW
Sbjct: 1  MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 60

Query: 61 -QADLVSVG 68
             D+V VG
Sbjct: 61 PMTDIVLVG 69



 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/36 (77%), Positives = 32/36 (88%)

Query: 133 DPVLEWVKAYRQYNPHMTTYYHVQSMEENPNACVIC 168
           D VLE VKAY+ YNPH+TTYY+ QS+EENPNACVIC
Sbjct: 142 DHVLELVKAYKAYNPHLTTYYYAQSIEENPNACVIC 177