Miyakogusa Predicted Gene

Lj1g3v2740260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2740260.1 tr|D7KSP1|D7KSP1_ARALL Glycosyl transferase
family 1 protein OS=Arabidopsis lyrata subsp. lyrata
GN=,58.54,4e-19,seg,NULL; GLYCOSYLTRANSFERASE,NULL,CUFF.29726.1
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75420.1 | Symbols:  | UDP-Glycosyltransferase superfamily pr...    90   6e-19
AT1G19710.1 | Symbols:  | UDP-Glycosyltransferase superfamily pr...    80   7e-16

>AT1G75420.1 | Symbols:  | UDP-Glycosyltransferase superfamily
           protein | chr1:28305469-28307317 FORWARD LENGTH=463
          Length = 463

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 77/100 (77%), Gaps = 5/100 (5%)

Query: 35  FIRTTSDSCNASQPHPELHVPPSPEPS-----LEFMKSKRVLMVSHELSLSGGPLLLMEL 89
            +R++ ++C+ S    E     S         L+FMKSK VL+VSHELSLSGGPLLLMEL
Sbjct: 29  LVRSSFETCSISSQFVEEKNGESSAAKFQSNPLDFMKSKLVLLVSHELSLSGGPLLLMEL 88

Query: 90  AFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQV 129
           AFLLRGVG+DVVWITNQKPL+ D++VYSLE+KMLDRGVQV
Sbjct: 89  AFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGVQV 128


>AT1G19710.1 | Symbols:  | UDP-Glycosyltransferase superfamily
           protein | chr1:6814920-6816716 FORWARD LENGTH=479
          Length = 479

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 75/106 (70%), Gaps = 12/106 (11%)

Query: 35  FIRTTSDSCNASQPHPELH-----------VPPSPEPSLEFMKSKRVLMVSHELSLSGGP 83
            +R+T DSC+ S                  V  S  P LEFMKSK VL+VSHELSLSGGP
Sbjct: 34  LVRSTFDSCSVSGKRCSREKEDNSDIKIQSVSGSLNP-LEFMKSKLVLLVSHELSLSGGP 92

Query: 84  LLLMELAFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQV 129
           LLLMELAFLLRGV S+VVWITNQKP++ D+++  LE+KMLDRGVQV
Sbjct: 93  LLLMELAFLLRGVESEVVWITNQKPVEEDEVIKVLEHKMLDRGVQV 138