Miyakogusa Predicted Gene

Lj1g3v2740230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2740230.1 Non Chatacterized Hit- tr|I1MXZ3|I1MXZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6966
PE=,78.67,0,GTP_HflX: GTP-binding protein HflX,GTPase HflX; small_GTP:
small GTP-binding protein domain,Small GT,CUFF.29724.1
         (557 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57960.1 | Symbols:  | GTP-binding protein, HflX | chr5:23463...   736   0.0  
AT3G49725.1 | Symbols:  | GTP-binding protein, HflX | chr3:18442...   153   4e-37
AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family ...    54   2e-07

>AT5G57960.1 | Symbols:  | GTP-binding protein, HflX |
           chr5:23463133-23466481 REVERSE LENGTH=540
          Length = 540

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/446 (82%), Positives = 410/446 (91%), Gaps = 5/446 (1%)

Query: 107 FRKKKEEQQDNGDTFDNRYKLRNGREVLEEKAYLVGVEWKGDDVEDSFGVQESLSELAQL 166
            RKKK +++    + D+R+KLRNG+E+ EEKAYLVGVE KGD  E  F ++ESL EL QL
Sbjct: 90  LRKKKGDEE----SLDDRFKLRNGKEIFEEKAYLVGVERKGDG-ECLFNIEESLEELEQL 144

Query: 167 ADTAGLLVVGSTHQKLASPNPRTYIGSGKVSEIKSAIHGLDVETVIFDDELSAGQLRNLE 226
           ADTAGL VVGST+QKLASPNPRTYIGSGKV+EIKSAI+ LDVETVIFDDELS GQLRNLE
Sbjct: 145 ADTAGLAVVGSTYQKLASPNPRTYIGSGKVAEIKSAINALDVETVIFDDELSPGQLRNLE 204

Query: 227 KIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKV 286
           K FGGDVRVCDRTALILDIFNQRAATHEA+LQV+LAQMEYQLPRLT+MWTHLERQ+GG+V
Sbjct: 205 KAFGGDVRVCDRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTRMWTHLERQSGGQV 264

Query: 287 KGMGEKQIEVDKRILRNQIGVLKKELESVRKHRKQYRNRRFSIPVPVVSLVGYTNAGKST 346
           KGMGEKQIEVDKRILR QIGVLKKELESVRKHRKQYR+RR +IPVPVVSLVGYTNAGKST
Sbjct: 265 KGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRSRRVAIPVPVVSLVGYTNAGKST 324

Query: 347 LLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLE 406
           LLNQLTGA+VLAE++LFATLDPTTRRVQM+NGKEFLLTDTVGFIQKLPTTLVAAFRATLE
Sbjct: 325 LLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKLPTTLVAAFRATLE 384

Query: 407 EISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSPIPRLMVWNKVDKASDPQKIRLDA 466
           EI+ESSLLVHVVDISHPLAEQQI AV+KV+SELDVS IP+L+VWNKVD+  DPQK++L+A
Sbjct: 385 EIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVSSIPKLVVWNKVDRVDDPQKVKLEA 444

Query: 467 EKREDVICISALTGEGLQEFCNAVQDKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTE 526
           E+  D ICISALTGEGL +FCNAV +KLKDSMVWVEALLPF+ GDLLSTIH+VGMV++TE
Sbjct: 445 EETGDTICISALTGEGLDDFCNAVHEKLKDSMVWVEALLPFDKGDLLSTIHKVGMVKETE 504

Query: 527 YTEQGTYIKAHVPLRFARLLTPMRQM 552
           YTE GT I+AHVPLRFA+LL PMR +
Sbjct: 505 YTENGTLIRAHVPLRFAQLLKPMRHL 530


>AT3G49725.1 | Symbols:  | GTP-binding protein, HflX |
           chr3:18442448-18445397 REVERSE LENGTH=620
          Length = 620

 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 170/318 (53%), Gaps = 39/318 (12%)

Query: 173 LVVGSTHQKLASPNPRTYIGSGKVSEIKSAIHGLD----VETVIFDDELSAGQLRNLEKI 228
           +VV +  ++ + P   TY GSG V  IK  ++  D    V+ V  +  L+A Q RNLE+I
Sbjct: 157 VVVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERI 216

Query: 229 FGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGK--- 285
           +   V   DR  LI++IFN  A T EA LQ  LA + Y   RL ++     R   G+   
Sbjct: 217 WAKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGE 274

Query: 286 ---VKGMG----------------EKQIEVDKRILRNQIGVLKKELESVRKHR---KQYR 323
              V   G                E ++++ +R + ++   L  +++  ++ R   +  R
Sbjct: 275 AEVVSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGR 334

Query: 324 NRRFSI---PVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKE 380
            +R  +       +++VGYTNAGKSTL++ LT   +   ++LFATLDPT +   + +G  
Sbjct: 335 KKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNF 394

Query: 381 FLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELD 440
            LL+DTVGFI  LP  LV AF++TLEE+ E+ LL+HVVD + P  E+  + V  VL+++ 
Sbjct: 395 VLLSDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIG 454

Query: 441 VSPIPRLM----VWNKVD 454
           V P  +L     VWNK+D
Sbjct: 455 V-PEEKLQNMIEVWNKID 471


>AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family
           protein | chr5:6171839-6174823 REVERSE LENGTH=681
          Length = 681

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 334 VSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKL 393
           V +VG  NAGKSTLL+ ++ A     +  F TL P    V           D+   +  L
Sbjct: 381 VGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFD-------YDSTMVVADL 433

Query: 394 PTTLVAAFRA------TLEEISESSLLVHVVDISHPLAEQQINAV--DKVLSELDVSPIP 445
           P  L  A R        L      S LVHVVD S P  E +  AV  +  L   +++  P
Sbjct: 434 PGLLEGAHRGFGLGHEFLRHTERCSALVHVVDGSAPQPELEFEAVRLELELFSPEIAEKP 493

Query: 446 RLMVWNKVDKASDPQKIRLDAE----KREDVICISALTGEGLQEFCNAVQDKLK 495
            ++ +NK+D     +K  +  E    +  +  C+SA+  EG  E  ++V + LK
Sbjct: 494 YVVAYNKMDLPDAYEKWPMFQETLRARGIEPFCMSAVQREGTHEVISSVYELLK 547