Miyakogusa Predicted Gene
- Lj1g3v2703880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2703880.1 Non Chatacterized Hit- tr|J3N9Q0|J3N9Q0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,36.6,3e-19,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,NULL;
R,CUFF.29425.1
(190 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 203 5e-53
AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 203 5e-53
AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-... 192 1e-49
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 149 1e-36
AT5G15790.2 | Symbols: | RING/U-box superfamily protein | chr5:... 100 9e-22
AT5G15790.1 | Symbols: | RING/U-box superfamily protein | chr5:... 100 9e-22
AT3G02290.1 | Symbols: | RING/U-box superfamily protein | chr3:... 95 3e-20
AT5G38895.3 | Symbols: | RING/U-box superfamily protein | chr5:... 92 1e-19
AT5G38895.2 | Symbols: | RING/U-box superfamily protein | chr5:... 92 2e-19
AT5G38895.1 | Symbols: | RING/U-box superfamily protein | chr5:... 92 2e-19
AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 85 3e-17
AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 85 3e-17
AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 84 5e-17
AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A | chr4:8196012-... 62 3e-10
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 61 5e-10
AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 61 6e-10
AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-... 61 6e-10
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 2e-08
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 3e-08
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 54 7e-08
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 8e-08
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 9e-08
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 4e-07
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 4e-07
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 5e-07
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 6e-07
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 7e-07
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 8e-07
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 1e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 1e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 1e-06
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 1e-06
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 1e-06
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 49 2e-06
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 3e-06
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 4e-06
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 48 4e-06
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 4e-06
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 48 4e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 4e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 48 4e-06
AT5G05910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 4e-06
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 5e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 47 5e-06
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 5e-06
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 47 5e-06
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 6e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 6e-06
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 47 7e-06
AT4G12140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 7e-06
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 7e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 8e-06
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 47 8e-06
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 47 8e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 8e-06
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 47 9e-06
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 1e-05
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 47 1e-05
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 1e-05
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 1e-05
>AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147962 FORWARD LENGTH=190
Length = 190
Score = 203 bits (517), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 125/191 (65%), Gaps = 4/191 (2%)
Query: 1 MGGCCCSARKPHLHGTPVYYYCPPTLEE---RQYLTSNDXXXXXXXXXXXXXESSTPDTY 57
MGGCC S+RK HL GTPVYYYCP + EE E+S PDT+
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60
Query: 58 RAPPAPLPYDIVLGGPASTDSESGRETVSASSFETLITCEDLEESDGKAQVKFAPISPRN 117
AP APLPYD++LG P TDSES + +S SSFETL TCEDL ESD K +SPR
Sbjct: 61 CAP-APLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRK 119
Query: 118 AELSKSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
++ SK LV EEED CPIC E+YD ENP++ TKCEH FHLSC+LEW+ERSD CPIC
Sbjct: 120 SDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPIC 179
Query: 178 DQEMMFDQTLN 188
D+E++FD LN
Sbjct: 180 DKEVVFDDRLN 190
>AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147962 FORWARD LENGTH=190
Length = 190
Score = 203 bits (517), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 125/191 (65%), Gaps = 4/191 (2%)
Query: 1 MGGCCCSARKPHLHGTPVYYYCPPTLEE---RQYLTSNDXXXXXXXXXXXXXESSTPDTY 57
MGGCC S+RK HL GTPVYYYCP + EE E+S PDT+
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60
Query: 58 RAPPAPLPYDIVLGGPASTDSESGRETVSASSFETLITCEDLEESDGKAQVKFAPISPRN 117
AP APLPYD++LG P TDSES + +S SSFETL TCEDL ESD K +SPR
Sbjct: 61 CAP-APLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRK 119
Query: 118 AELSKSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
++ SK LV EEED CPIC E+YD ENP++ TKCEH FHLSC+LEW+ERSD CPIC
Sbjct: 120 SDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPIC 179
Query: 178 DQEMMFDQTLN 188
D+E++FD LN
Sbjct: 180 DKEVVFDDRLN 190
>AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A |
chr4:146866-147957 FORWARD LENGTH=189
Length = 189
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 118/182 (64%), Gaps = 4/182 (2%)
Query: 1 MGGCCCSARKPHLHGTPVYYYCPPTLEE---RQYLTSNDXXXXXXXXXXXXXESSTPDTY 57
MGGCC S+RK HL GTPVYYYCP + EE E+S PDT+
Sbjct: 1 MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60
Query: 58 RAPPAPLPYDIVLGGPASTDSESGRETVSASSFETLITCEDLEESDGKAQVKFAPISPRN 117
AP APLPYD++LG P TDSES + +S SSFETL TCEDL ESD K +SPR
Sbjct: 61 CAP-APLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRK 119
Query: 118 AELSKSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
++ SK LV EEED CPIC E+YD ENP++ TKCEH FHLSC+LEW+ERSD CPIC
Sbjct: 120 SDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPIC 179
Query: 178 DQ 179
D+
Sbjct: 180 DK 181
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 119/214 (55%), Gaps = 28/214 (13%)
Query: 1 MGGCCC--SARKPHLHGTPVYYYCPPTLEERQYLTS-----NDXXXXXXXXXXXXXESST 53
MGGCCC S+R+ + P YYY P EER L+S + E+S+
Sbjct: 1 MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSS 60
Query: 54 PDTYRAPPAPLPYDIVLGGPA-------------------STDSESGRETVSASSFETLI 94
PD Y PP P P+D+ +G P S ++ES +ETV +
Sbjct: 61 PDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVDGITLGVPT 120
Query: 95 TCEDLEESDGKAQVKFAPISPRNAELSKSNKSHTLVAEEEDGCPICLEEYDGENPKILTK 154
TC +E+D K Q + S + K +K+ + EEE+ CPICLEEYD ENPK++ K
Sbjct: 121 TCSH-KETDSKIQTEIDLESTEEID-PKLSKAVFIPIEEEEDCPICLEEYDIENPKLVAK 178
Query: 155 CEHHFHLSCILEWMERSDSCPICDQEMMFDQTLN 188
C+HHFHL+CILEWMERS++CP+C++EM+FD TL+
Sbjct: 179 CDHHFHLACILEWMERSETCPVCNKEMVFDSTLD 212
>AT5G15790.2 | Symbols: | RING/U-box superfamily protein |
chr5:5149800-5150964 FORWARD LENGTH=232
Length = 232
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 32/160 (20%)
Query: 55 DTYRAPPAPLPYDIV----------------------------LGGPASTDSESGRETVS 86
+T+ + P PLPYD L A DSES S
Sbjct: 76 NTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLRSDADVDSESFSVEGS 135
Query: 87 ASSFETLITCEDLEESDGKAQVKFAPISPRNAELSKSNKSHTLVAEEEDGCPICLEEYDG 146
+ + +I+ ED +E ++ + ++ +S SN+ + +++ED CP CLEEY
Sbjct: 136 KWANKLIISGEDSKEEFSRSSRRIL----QSRTMSTSNEGLYITSDDEDVCPTCLEEYIS 191
Query: 147 ENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
ENPKI+TKC HHFHLSCI EWMERS++CP+C + M F +T
Sbjct: 192 ENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
>AT5G15790.1 | Symbols: | RING/U-box superfamily protein |
chr5:5149800-5150964 FORWARD LENGTH=232
Length = 232
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 32/160 (20%)
Query: 55 DTYRAPPAPLPYDIV----------------------------LGGPASTDSESGRETVS 86
+T+ + P PLPYD L A DSES S
Sbjct: 76 NTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLRSDADVDSESFSVEGS 135
Query: 87 ASSFETLITCEDLEESDGKAQVKFAPISPRNAELSKSNKSHTLVAEEEDGCPICLEEYDG 146
+ + +I+ ED +E ++ + ++ +S SN+ + +++ED CP CLEEY
Sbjct: 136 KWANKLIISGEDSKEEFSRSSRRIL----QSRTMSTSNEGLYITSDDEDVCPTCLEEYIS 191
Query: 147 ENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
ENPKI+TKC HHFHLSCI EWMERS++CP+C + M F +T
Sbjct: 192 ENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
>AT3G02290.1 | Symbols: | RING/U-box superfamily protein |
chr3:459385-460688 FORWARD LENGTH=231
Length = 231
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 30/159 (18%)
Query: 55 DTYRAPPAPLPYDIVLGGPASTDS-ESGRETVSASSFET---LITCEDLE-ESDGKAQVK 109
+ +R+ P PLPYD P S S RE S+ S E L + D + ES G K
Sbjct: 75 EAFRSTPRPLPYD---ADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGGCK 131
Query: 110 FAP----------------------ISPRNAELSKSNKSHTLVAEEEDGCPICLEEYDGE 147
+A + R+ + +++ +++E+ED CP CLEEY E
Sbjct: 132 WANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYTSE 191
Query: 148 NPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
NPKI+TKC HHFHLSCI EWMERS++CP+C + M F++T
Sbjct: 192 NPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
>AT5G38895.3 | Symbols: | RING/U-box superfamily protein |
chr5:15571302-15573315 FORWARD LENGTH=326
Length = 326
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 28/156 (17%)
Query: 50 ESSTPDTYRAPPAPLPYD-------IVLGGPASTDSESGRETVSASSFETLITCEDLEES 102
+ S Y +PP PLPYD V G S SG E+ +T ++ E L
Sbjct: 175 DDSLSSVYHSPPTPLPYDADPRYFRFVKGS-----SHSGEESEPLRG-DTEMSSEAL--G 226
Query: 103 DGKAQVKFAPISPRNAEL-----SKSNKSHTL--------VAEEEDGCPICLEEYDGENP 149
DG A+ + + E+ S KS T+ +++ED CP CL++Y ENP
Sbjct: 227 DGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDDYTLENP 286
Query: 150 KILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
KI+TKC HHFHLSCI EWMERS++CP+C + M FD+
Sbjct: 287 KIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322
>AT5G38895.2 | Symbols: | RING/U-box superfamily protein |
chr5:15571321-15573315 FORWARD LENGTH=296
Length = 296
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 28/156 (17%)
Query: 50 ESSTPDTYRAPPAPLPYD-------IVLGGPASTDSESGRETVSASSFETLITCEDLEES 102
+ S Y +PP PLPYD V G S SG E+ +T ++ E L
Sbjct: 145 DDSLSSVYHSPPTPLPYDADPRYFRFVKGS-----SHSGEESEPLRG-DTEMSSEAL--G 196
Query: 103 DGKAQVKFAPISPRNAEL-----SKSNKSHTL--------VAEEEDGCPICLEEYDGENP 149
DG A+ + + E+ S KS T+ +++ED CP CL++Y ENP
Sbjct: 197 DGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDDYTLENP 256
Query: 150 KILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
KI+TKC HHFHLSCI EWMERS++CP+C + M FD+
Sbjct: 257 KIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 292
>AT5G38895.1 | Symbols: | RING/U-box superfamily protein |
chr5:15572084-15573315 FORWARD LENGTH=221
Length = 221
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 28/156 (17%)
Query: 50 ESSTPDTYRAPPAPLPYD-------IVLGGPASTDSESGRETVSASSFETLITCEDLEES 102
+ S Y +PP PLPYD V G S SG E+ +T ++ E L
Sbjct: 70 DDSLSSVYHSPPTPLPYDADPRYFRFVKGS-----SHSGEESEPLRG-DTEMSSEAL--G 121
Query: 103 DGKAQVKFAPISPRNAEL-----SKSNKSHTL--------VAEEEDGCPICLEEYDGENP 149
DG A+ + + E+ S KS T+ +++ED CP CL++Y ENP
Sbjct: 122 DGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDDYTLENP 181
Query: 150 KILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
KI+TKC HHFHLSCI EWMERS++CP+C + M FD+
Sbjct: 182 KIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 217
>AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 132 EEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
E D CPICLEEY+ +NPK+LTKC H FHL+CIL WMERS++CP+CD+E++ ++
Sbjct: 154 EAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 208
>AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 132 EEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
E D CPICLEEY+ +NPK+LTKC H FHL+CIL WMERS++CP+CD+E++ ++
Sbjct: 154 EAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 208
>AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12241837 REVERSE LENGTH=153
Length = 153
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 132 EEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
E D CPICLEEY+ +NPK+LTKC H FHL+CIL WMERS++CP+CD+E++ ++
Sbjct: 99 EAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 153
>AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A |
chr4:8196012-8198240 FORWARD LENGTH=371
Length = 371
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 134 EDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMF 183
+D C ICLE + ++P +T C+H +HL CI+EW +RS CPIC Q +
Sbjct: 43 DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVL 92
>AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 134 EDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
+D C ICLE + +P LT C+H +HL CILEW +RS CP+C Q +
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSI 77
>AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 134 EDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
+D C ICLE + +P LT C+H +HL CILEW +RS CP+C Q +
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSI 77
>AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A |
chr5:7277436-7279553 FORWARD LENGTH=375
Length = 375
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 134 EDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
+D C ICLE + +P LT C+H +HL CILEW +RS CP+C Q +
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSI 77
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
C ICL ++ DGE ++L KC H FH+ CI W+ SCP C Q ++ +Q
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 72 GPASTDSESGRETVSASSFETLITCEDLEESDGKAQVKFAPISPRNAELSKSNKSHTLVA 131
GPA + + S+FE L + D S G + + ++ + K++ +
Sbjct: 130 GPAMLSAVQSQMGAVDSTFEELSSIFDTGGSKGLT----GDLVDKIPKIKITGKNNLDAS 185
Query: 132 EEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
+D C +CL+++ GE + L C H FHL CI W+ R SCP+C +++
Sbjct: 186 GNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 119 ELSKSNKSHTLVAEEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
+++ + ++T +E D C +CL+++ GE + L C H FHL CI W+ R SCP+C
Sbjct: 178 KMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMC 237
Query: 178 DQEM 181
+++
Sbjct: 238 RRDI 241
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 132 EEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
+ + C ICL++++ GE + L +C H FH++CI EW+ R ++CPIC + + T
Sbjct: 166 QTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICRDHLSHNTT 221
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 130 VAEEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
+A E C ICL E++ GE+ ++L KC+H FH+ CI +W+ SCP C + +F Q
Sbjct: 100 LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC-RTSIFSQ 155
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 132 EEEDGCPICLEEYD---GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
EEE C ICLE++ +N +L C H FH SCI EW++R SCP+C
Sbjct: 148 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLC 196
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 122 KSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
K+ K + V E D C ICLEE+D + C H F C+LEW RS CP+C E+
Sbjct: 262 KTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCRLEL 321
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 126 SHTLVAEEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
S +V + C ICL++ GE + L KC+H FHL C+ +W+ R SCPIC Q +
Sbjct: 165 SSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
C ICL ++ +GE ++L KC H FH+ CI W+ SCP C Q ++ QT
Sbjct: 113 CLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT 163
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 132 EEEDGCPICLEEYD---GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
EEE C ICLE++ +N +L C H FH +CI EW++R SCP+C
Sbjct: 132 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLC 180
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 122 KSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQ 179
K + SHTLV + C IC +EY+ E+ C H FH+ C+ +W+ R ++CP+C +
Sbjct: 308 KPSVSHTLVDRK---CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKK 362
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 123 SNKSHTLVAEEEDG-CPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
S + L EE+D C +CLE+++ + +LT C+H FH CI+ W++ CP+C
Sbjct: 157 SRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVC 212
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 123 SNKSHTLVAEEEDG-CPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
S + L EE+D C +CLE+++ + +LT C+H FH CI+ W++ CP+C
Sbjct: 129 SRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVC 184
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 105 KAQVKFAPISPRNAELSKSN-KSHTLVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLS 162
K +V P R+ + N K V E C +CL E DG+ ++L C+H FH+
Sbjct: 59 KERVGIKPYVLRSIPIVDFNTKDFKYVLE----CVVCLSELADGDKARVLPSCDHWFHVE 114
Query: 163 CILEWMERSDSCPICDQEMMFDQT 186
CI W++ + +CPIC + + Q+
Sbjct: 115 CIDSWLQSNSTCPICRKRVCLKQS 138
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 132 EEEDGCPICLEEYD---GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
EEE C IC+E++ +N +L C H FH SCI +W++R SCP+C
Sbjct: 148 EEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLC 196
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 125 KSHTLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFD 184
+ T VA+ + C IC +EY+ ++ +C H FH+ C+ +W+ R +SCP+C + M ++
Sbjct: 309 RQDTTVADRK--CIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVC-KTMAYN 365
Query: 185 QT 186
++
Sbjct: 366 KS 367
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMM 182
C ICL E+ DGE ++L C H FH+SCI W+ SCP C ++
Sbjct: 105 CAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLI 151
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 133 EEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
E CP+CL E++ E+ ++L KC H FH+SCI W+ +CP+C
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLC 218
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQTLNLV 190
C +CL ++ D E ++L KC H FH+ CI +W+E+ +CP+C + + L+++
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVL 178
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 133 EEDGCPICLEEY-DGENPKILTK--CEHHFHLSCILEWMERSDSCPICDQEM 181
E + C ICLE G P+ +T+ C H FH C+LEW++R ++CP+C E+
Sbjct: 153 ETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 98 DLEESDGKAQVKFAPISPRNAELSKSNKSHTLVAEEEDGCPICLEEYDGENPKILTKCEH 157
D ++SDG + + P +A L+ E+ D C ICL Y+ + C H
Sbjct: 259 DEKQSDGGGK-----MIPVDAASENLGNERVLLPEDADCC-ICLSSYEDGAELVSLPCNH 312
Query: 158 HFHLSCILEWMERSDSCPICDQEMM 182
HFH +CI++W++ + +CP+C ++
Sbjct: 313 HFHSTCIVKWLKMNATCPLCKFNIL 337
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 137 CPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
C +CL+++ GE + L C H FHL CI +W+ R SCP+C + +
Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 102 SDGKAQVKFAPISPRNAELSKSNKSHTLVAEEEDGCPICLEEY-DGENPKILTK--CEHH 158
S+ K ++ + AE KS K E + C ICLE G P LT+ C H
Sbjct: 124 SNNKKSLRIVLLGRIKAEELKSLKM------ETESCSICLENLVSGPKPSDLTRMTCSHV 177
Query: 159 FHLSCILEWMERSDSCPICDQEM 181
FH C+LEW R ++CP+C E+
Sbjct: 178 FHNPCLLEWFMRKNTCPLCRTEL 200
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 137 CPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
C +CL+++ GE + L C H FHL CI +W+ R SCP+C + +
Sbjct: 200 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 127 HTLVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMM 182
TL+AE+ D C ICL Y DG L C HHFH +CI++W++ +CP+C ++
Sbjct: 298 RTLLAEDADCC-ICLSSYEDGAELHAL-PCNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 130 VAEEEDG--CPICLEEYDGENP-KILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
+ EE+ G C ICL E+DG++ ++LT C H FH CI W E +CP+C +++
Sbjct: 101 LREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDL 155
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 128 TLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
T+ E C ICL+++D + C+H FH+ CI+ W+E SCP+C E+
Sbjct: 232 TVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 128 TLVAEEEDGCPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
T+ E C ICL+++D + C+H FH+ CI+ W+E SCP+C E+
Sbjct: 232 TVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 133 EEDGCPICLEEY-DGENPKILTK--CEHHFHLSCILEWMERSDSCPICDQEM 181
E + C ICLE G P+ +T+ C H FH C+LEW++R ++CP+C E+
Sbjct: 18 ETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
C ICL E+ D E ++L KC+H FH CI W+E +CP+C +
Sbjct: 128 CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
CPICL EY E + + +C+H FH+ CI EW++ SCP+C
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 294
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 134 EDG--CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMM 182
+DG C ICL E G+ ++L KC H FH+ CI W + +CPIC ++
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVL 173
>AT5G05910.1 | Symbols: | RING/U-box superfamily protein |
chr5:1776858-1777313 FORWARD LENGTH=151
Length = 151
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 129 LVAEEEDGCPICLEEYDGENPKI------LTKCEHHFHLSCILEWMERSDSCPIC 177
+V + E CPICLE+ + L+KC H FH++CI W+ S CPIC
Sbjct: 84 IVVDVELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQDCPIC 138
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 129 LVAEEEDGCPICLEEYDGENPKILTK--CEHHFHLSCILEWMERSDSCPICDQEM 181
+ EE+GC IC+E+Y E I+ K C+H FH CI +W++ + CP+C +
Sbjct: 175 VATTEENGCAICMEDYI-EGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 129 LVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
++ E + C +C++E+ DG + K + C+H FH C+L W+E +SCP+C E+
Sbjct: 208 MLKSEMNQCAVCMDEFEDGSDVKQM-PCKHVFHQDCLLPWLELHNSCPVCRFEL 260
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 131 AEEEDGCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
AE+ C ICL E+ G+ ++L +C H FH+SCI W+ SCP C Q ++ +
Sbjct: 98 AEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTR 153
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 133 EEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQTLNLV 190
E C +CL E+ + E+ ++L KC H FH+ CI W++ +CP+C ++ + +V
Sbjct: 155 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIV 213
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 115 PRNAELSKSNKSHTLVAEEEDG--CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERS 171
PR+ + + + AEE D C ICL ++ DGE ++L C H FH+ CI +W+
Sbjct: 79 PRST-FTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSR 137
Query: 172 DSCPICDQ 179
SCP C +
Sbjct: 138 SSCPSCRR 145
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 130 VAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERS-DSCPICDQEMM 182
+A E C ICL E+ DG+ ++L +C+H FH+ CI +W+ S SCP C +
Sbjct: 95 LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIF 149
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 137 CPICLEEYDG-ENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
C +CL +++ E ++L KC H FH+ CI +W+E+ +CP+C
Sbjct: 123 CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC 164
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 137 CPICLEEYDGE-NPKILTKCEHHFHLSCILEWMERSDSCPIC 177
CPICL EY E K L +CEH FH CI W++ +SCP+C
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVC 305
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 32/103 (31%)
Query: 77 DSESGRE-TVSASSFETLITCEDLEESDGKAQVKFAPISPRNAELSKSNKSHTLVAEEED 135
D E+G ++ ++ ET+I ED+EE D E
Sbjct: 47 DIETGHIPAINKTTVETIIKVEDVEEGD------------------------------EG 76
Query: 136 GCPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
C ICLEE+ G + KC H FH C+L W++ + +CPIC
Sbjct: 77 CCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPIC 119
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 133 EEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
+E GC ICLEE DG + KC H FH SCI W++++ SCP C
Sbjct: 113 DEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNC 158
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 128 TLVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
T+ E+ C +CL E+ D + ++L C H FHL CI W+ + +CP+C + +
Sbjct: 198 TISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>AT4G12140.1 | Symbols: | RING/U-box superfamily protein |
chr4:7266546-7267154 REVERSE LENGTH=202
Length = 202
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 133 EEDGCPICLEEYDGENPKILTK--CEHHFHLSCILEWMERSDSCPICDQEMMFDQ 185
E D C ICL+ + T+ C H FH SC++EW++R ++CP+C + +++D+
Sbjct: 149 ETDSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMC-RTVLYDR 202
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 114 SPRNAELSKSNKSHTLVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSD 172
S + EL +S + T + CPICL EY E + L +CEH FH CI W++
Sbjct: 306 SYKKVELGESRRLPT--GSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHS 363
Query: 173 SCPIC 177
SCP+C
Sbjct: 364 SCPVC 368
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 125 KSHTLVAEEEDGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
KS+T ++ + C +C EEY +GE+ L +C H FH CI EW+++ + CPIC
Sbjct: 625 KSNTKSPQDAEPCCVCQEEYTEGEDMGTL-ECGHEFHSQCIKEWLKQKNLCPIC 677
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 137 CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
C ICL E+ D E ++L KC+H FH CI W++ +CP+C +
Sbjct: 124 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 135 DGCPICLEEY-DGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEM 181
D C ICL E+ D + ++++ C H FH CI W E +CP+C +E+
Sbjct: 152 DQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRREL 199
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 20/83 (24%)
Query: 112 PISPRNAELSKSNKSHTL----------------VAEEEDGCPICLEEY-DGENPKILTK 154
P +PR++ ++K K L V EE C ICL ++ GE ++L K
Sbjct: 92 PSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEE---CVICLSDFVAGEQLRVLPK 148
Query: 155 CEHHFHLSCILEWMERSDSCPIC 177
C H FHL CI +W+ + +CP C
Sbjct: 149 CNHGFHLRCIDKWLTQHMTCPKC 171
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 137 CPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFDQT 186
C ICL E++ E+ ++L KC H FH+ CI W++ +CP+C +++ T
Sbjct: 155 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTT 205
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 116 RNAELSKSNKSHTLVAEEEDG---CPICLEEY-DGENPKILTKCEHHFHLSCILEWMERS 171
R + + AEE+ C ICLE+ +GE + +T C H FH+ CI W+ +
Sbjct: 46 RTFTVQHRRRWRKTAAEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKK 105
Query: 172 DSCPICDQEM 181
+CP+C E+
Sbjct: 106 STCPLCRAEI 115
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 137 CPICLEEYDGENP-KILTKCEHHFHLSCILEWMERSDSCPICDQEMM 182
CP+CL E++ E+ ++L KC H FH+ CI W+ +CP+C ++
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 137 CPICLEEYD-GENPKILTKCEHHFHLSCILEWMERSDSCPIC 177
C +CL E++ E+ ++L KC H FHL CI W++ +CP+C
Sbjct: 142 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLC 183
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 137 CPICLEEYDGENPKILTKCEHHFHLSCILEWMERSDSCPICDQEMMFD 184
C ICLEE+ E C+H FH CI +W+ SCP+C EM D
Sbjct: 113 CVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160