Miyakogusa Predicted Gene
- Lj1g3v2682530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2682530.1 Non Chatacterized Hit- tr|I1N3S1|I1N3S1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7776
PE=,80.35,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.29462.1
(1204 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 1492 0.0
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 1479 0.0
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 389 e-107
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 382 e-106
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 377 e-104
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 376 e-104
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 376 e-104
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 293 4e-79
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 284 3e-76
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 284 3e-76
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 284 3e-76
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 284 3e-76
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 283 4e-76
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 263 4e-70
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 248 2e-65
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 247 3e-65
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 246 7e-65
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 246 8e-65
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 236 1e-61
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 235 2e-61
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 186 8e-47
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 182 2e-45
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 173 7e-43
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 171 3e-42
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 171 3e-42
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 169 1e-41
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 168 2e-41
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 167 3e-41
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 164 3e-40
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 161 2e-39
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 129 1e-29
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 94 6e-19
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 92 2e-18
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 92 2e-18
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 91 4e-18
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 91 5e-18
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 87 8e-17
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 84 8e-16
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 82 2e-15
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 81 6e-15
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 80 7e-15
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 78 4e-14
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 73 1e-12
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 71 4e-12
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 70 1e-11
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 69 2e-11
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 69 2e-11
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 69 2e-11
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 69 2e-11
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 60 1e-08
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 60 1e-08
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 59 2e-08
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 57 7e-08
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 56 1e-07
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 55 3e-07
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 55 4e-07
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 53 2e-06
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 1492 bits (3862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/1220 (63%), Positives = 910/1220 (74%), Gaps = 59/1220 (4%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
MALIAYLMEFKGNYGPHLIIVPNAV+VNWKSELHTWLPSVSCI+YVG+KD RSKLFSQEV
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV 1076
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
AMKFNVLVTTYEFIMYDRSKLSK+DWKYIIIDEAQRMKDR+SVLARDLDRYRC RRLLL
Sbjct: 1077 CAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLL 1136
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQND PDVFDN+KAF+DWF++PFQKEGP+ N EDDWLETEKKVI+
Sbjct: 1137 TGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIV 1196
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
IHRLHQILEPFMLRRRVEDVEGSLP KVS+VLRC+MSAIQSA+YDW+K+TG+LR+DP+DE
Sbjct: 1197 IHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDE 1256
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRI 300
K + QKNP YQ K Y+TL+NRCMELRK CNHPLLNYP+F+D SK+F+V+SCGKLWILDRI
Sbjct: 1257 KLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRI 1316
Query: 301 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSD 360
LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN PD+D
Sbjct: 1317 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTD 1376
Query: 361 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 420
CFIFLLSIRAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REVKVIYMEAVV
Sbjct: 1377 CFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVV 1436
Query: 421 DKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFD 480
+K+SSH+KEDELRSG +VD+ED++ GKDRYIGSIE LIRNNIQQYKIDMADEVINAGRFD
Sbjct: 1437 EKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFD 1496
Query: 481 QXXXXXXXXXXXXXXXXXXXXYQETLHNVPSLQEVNRMIARNEEEVELFDQMDEEEDWVE 540
Q YQET+H+VPSL EVNRMIAR+EEEVELFDQMDEE DW E
Sbjct: 1497 QRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTE 1556
Query: 541 EMTQYDQVPRWLRATTKEFNAAIAALSKRPSKK-------TVLGGGTGLESSEISEKRRG 593
EMT ++QVP+WLRA+T+E NA +A LSK+PSK V GG G E++RG
Sbjct: 1557 EMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLSSSNLIVQPGGPG------GERKRG 1610
Query: 594 RPKGKNHPSYKELEDE-NEYSEASSEDRNGYSAH--EGEIAESEDDGFIGADGSQPMDKA 650
RPK K +YKE+ED+ YSE SSE+RN S + EG+I + +DD GA G +K
Sbjct: 1611 RPKSKKI-NYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKG 1669
Query: 651 QLEENGAPFDAVYEFPRSSEGARNNHEIEEAGSSGSALNSQRLKQIGSPPVSAQKFGSLS 710
+ + G Y++P S + N ++AGSSGS+ S R K++ S PVS+QKFGSLS
Sbjct: 1670 EFD--GENPVCGYDYPPGSGSYKKNPPRDDAGSSGSSPESHRSKEMAS-PVSSQKFGSLS 1726
Query: 711 ALDSRPSSTSKRMGDDLEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQQPKIKRKR 770
ALD+RP S SKR+ DDLEEGEIA SGDSH+D Q+SGSW HDRDEG++EQVL QP IKRKR
Sbjct: 1727 ALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGSWAHDRDEGDEEQVL-QPTIKRKR 1785
Query: 771 SLRVRPRHTMERPEDKSGSEIVSLQRGESSILSDYKYQLQTRTDPESKPLGNPNASKHDK 830
S+R+RPR T ER + GSE+ + Q + D Y+ + RT +S S
Sbjct: 1786 SIRLRPRQTAERVD---GSEMPAAQ----PLQVDRSYRSKLRTVVDSH-------SSRQD 1831
Query: 831 NESSLKNKRNLPLRKVANTSKLH-GSPKSSRLNCMSIPSEDGSKDTRENREG-KPINLSG 888
S R++P +KVA+TSKLH SPKS RLN + ED ++ +RE +G PI+ S
Sbjct: 1832 QSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDNAEASRETWDGTSPISSSN 1891
Query: 889 SSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLD 948
+ R M+ IIQ+ CK VISKLQRRIDK+GQQ+VP+LT KRI+N GY AG LL+
Sbjct: 1892 AGAR---MSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLWKRIQN-GYAAGGVNNLLE 1947
Query: 949 LRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFP 1008
LR+ID R++RLEY GVMEL SDVQ MLR AM YG+S EV +EA +VHNLFFD+LK++FP
Sbjct: 1948 LREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEAKKVHNLFFDLLKMSFP 2007
Query: 1009 NVDFREARNGLXXXXXXXXXXXXXXXXXT-VGPSKRNRVMNDVETDPTLPQKPLQRGSAS 1067
+ DFREARN L + KR +++N+ ET+P+ PQ+ QR
Sbjct: 2008 DTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNEPETEPSSPQRSQQR---- 2063
Query: 1068 AGDSSRIKVQLPQKESRTGGGSGSAREQHQQDNPSLPTHPGELVVCKKKRNDREKSLVKT 1127
++SRI+VQ+PQKE++ GG + H ++P L HPGELV+CKKKR DREKS KT
Sbjct: 2064 --ENSRIRVQIPQKETKLGGTTS-----HTDESPIL-AHPGELVICKKKRKDREKSGPKT 2115
Query: 1128 RTGSAGPVSPPS---MGPAIKSPRSGSNPRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1184
RTG + P +G ++SP SG PR++
Sbjct: 2116 RTGGSSSPVSPPPAMIGRGLRSPVSGGVPRET--RLAQQQRWPNQPTHPNNSGAAGDSVG 2173
Query: 1185 WANPVKRLRSDSGKRRPSHM 1204
WANPVKRLR+DSGKRRPSH+
Sbjct: 2174 WANPVKRLRTDSGKRRPSHL 2193
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 1479 bits (3829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/1220 (63%), Positives = 907/1220 (74%), Gaps = 60/1220 (4%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
MALIAYLMEFKGNYGPHLIIVPNAV+VNWKSELHTWLPSVSCI+YVG+KD RSKLFSQ V
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQ-V 1075
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
KFNVLVTTYEFIMYDRSKLSK+DWKYIIIDEAQRMKDR+SVLARDLDRYRC RRLLL
Sbjct: 1076 KFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLL 1135
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQND PDVFDN+KAF+DWF++PFQKEGP+ N EDDWLETEKKVI+
Sbjct: 1136 TGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIV 1195
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
IHRLHQILEPFMLRRRVEDVEGSLP KVS+VLRC+MSAIQSA+YDW+K+TG+LR+DP+DE
Sbjct: 1196 IHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDE 1255
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRI 300
K + QKNP YQ K Y+TL+NRCMELRK CNHPLLNYP+F+D SK+F+V+SCGKLWILDRI
Sbjct: 1256 KLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRI 1315
Query: 301 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSD 360
LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN PD+D
Sbjct: 1316 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTD 1375
Query: 361 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 420
CFIFLLSIRAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REVKVIYMEAVV
Sbjct: 1376 CFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVV 1435
Query: 421 DKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFD 480
+K+SSH+KEDELRSG +VD+ED++ GKDRYIGSIE LIRNNIQQYKIDMADEVINAGRFD
Sbjct: 1436 EKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFD 1495
Query: 481 QXXXXXXXXXXXXXXXXXXXXYQETLHNVPSLQEVNRMIARNEEEVELFDQMDEEEDWVE 540
Q YQET+H+VPSL EVNRMIAR+EEEVELFDQMDEE DW E
Sbjct: 1496 QRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTE 1555
Query: 541 EMTQYDQVPRWLRATTKEFNAAIAALSKRPSKK-------TVLGGGTGLESSEISEKRRG 593
EMT ++QVP+WLRA+T+E NA +A LSK+PSK V GG G E++RG
Sbjct: 1556 EMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLSSSNLIVQPGGPG------GERKRG 1609
Query: 594 RPKGKNHPSYKELEDE-NEYSEASSEDRNGYSAH--EGEIAESEDDGFIGADGSQPMDKA 650
RPK K +YKE+ED+ YSE SSE+RN S + EG+I + +DD GA G +K
Sbjct: 1610 RPKSKKI-NYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKG 1668
Query: 651 QLEENGAPFDAVYEFPRSSEGARNNHEIEEAGSSGSALNSQRLKQIGSPPVSAQKFGSLS 710
+ + G Y++P S + N ++AGSSGS+ S R K++ S PVS+QKFGSLS
Sbjct: 1669 EFD--GENPVCGYDYPPGSGSYKKNPPRDDAGSSGSSPESHRSKEMAS-PVSSQKFGSLS 1725
Query: 711 ALDSRPSSTSKRMGDDLEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQQPKIKRKR 770
ALD+RP S SKR+ DDLEEGEIA SGDSH+D Q+SGSW HDRDEG++EQVL QP IKRKR
Sbjct: 1726 ALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRSGSWAHDRDEGDEEQVL-QPTIKRKR 1784
Query: 771 SLRVRPRHTMERPEDKSGSEIVSLQRGESSILSDYKYQLQTRTDPESKPLGNPNASKHDK 830
S+R+RPR T ER + GSE+ + Q + D Y+ + RT +S S
Sbjct: 1785 SIRLRPRQTAERVD---GSEMPAAQ----PLQVDRSYRSKLRTVVDSH-------SSRQD 1830
Query: 831 NESSLKNKRNLPLRKVANTSKLH-GSPKSSRLNCMSIPSEDGSKDTRENREG-KPINLSG 888
S R++P +KVA+TSKLH SPKS RLN + ED ++ +RE +G PI+ S
Sbjct: 1831 QSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVEDNAEASRETWDGTSPISSSN 1890
Query: 889 SSTRTTKMTEIIQRGCKNVISKLQRRIDKDGQQVVPLLTAFLKRIENSGYTAGSGKTLLD 948
+ R M+ IIQ+ CK VISKLQRRIDK+GQQ+VP+LT KRI+N GY AG LL+
Sbjct: 1891 AGAR---MSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLWKRIQN-GYAAGGVNNLLE 1946
Query: 949 LRKIDQRIDRLEYNGVMELVSDVQFMLRSAMHSYGYSEEVNNEADRVHNLFFDILKIAFP 1008
LR+ID R++RLEY GVMEL SDVQ MLR AM YG+S EV +EA +VHNLFFD+LK++FP
Sbjct: 1947 LREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEAKKVHNLFFDLLKMSFP 2006
Query: 1009 NVDFREARNGLXXXXXXXXXXXXXXXXXT-VGPSKRNRVMNDVETDPTLPQKPLQRGSAS 1067
+ DFREARN L + KR +++N+ ET+P+ PQ+ QR
Sbjct: 2007 DTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNEPETEPSSPQRSQQR---- 2062
Query: 1068 AGDSSRIKVQLPQKESRTGGGSGSAREQHQQDNPSLPTHPGELVVCKKKRNDREKSLVKT 1127
++SRI+VQ+PQKE++ GG + H ++P L HPGELV+CKKKR DREKS KT
Sbjct: 2063 --ENSRIRVQIPQKETKLGGTTS-----HTDESPIL-AHPGELVICKKKRKDREKSGPKT 2114
Query: 1128 RTGSAGPVSPPS---MGPAIKSPRSGSNPRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1184
RTG + P +G ++SP SG PR++
Sbjct: 2115 RTGGSSSPVSPPPAMIGRGLRSPVSGGVPRET--RLAQQQRWPNQPTHPNNSGAAGDSVG 2172
Query: 1185 WANPVKRLRSDSGKRRPSHM 1204
WANPVKRLR+DSGKRRPSH+
Sbjct: 2173 WANPVKRLRTDSGKRRPSHL 2192
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 315/557 (56%), Gaps = 61/557 (10%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
+ALIAYL+E K +GPHLI+ P AV+ NW++E W PS+S Y GSK+ R+++ ++ +
Sbjct: 422 IALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRAR-I 480
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDR-YRCHRRLL 119
KFNVL+T Y+ IM D++ L KIDW Y+I+DE R+K+ + LA+ L YR RRLL
Sbjct: 481 AGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLL 540
Query: 120 LTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVI 179
LTGTP+QN P +F++ F +WF+ PF + G + L E++++
Sbjct: 541 LTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSAS------LTDEEELL 594
Query: 180 IIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPED 239
II+RLH ++ PF+LRR+ +VE LP K ++L+C MSA Q Y V G + L +
Sbjct: 595 IINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGN 654
Query: 240 EKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKE-FIVKSCGKLWILD 298
K K +L N M+LRK CNHP L ++ K+ IV++ GK +LD
Sbjct: 655 GKSK-------------SLQNLTMQLRKCCNHPYLFVGADYNMCKKPEIVRASGKFELLD 701
Query: 299 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPD 358
R+L KL++ GHR+LLFS MT+L+D+LE YL +Y R+DG+T + R + FN PD
Sbjct: 702 RLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPD 761
Query: 359 SDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA 418
S F+FLLS RA G GLNLQ+ADT++I+D D NP+ ++QA RAHRIGQK+EV+V + +
Sbjct: 762 SPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVS 821
Query: 419 VVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVINAGR 478
IGSIE +I +Q K+ + +VI AG
Sbjct: 822 --------------------------------IGSIEEVILERAKQ-KMGIDAKVIQAGL 848
Query: 479 FDQXXXXXXXXXXXXXXXXXXXXYQETLHNVPSLQEVNRMIARNEEEVELFDQMDEE--- 535
F+ +VPS +E+NR+ AR EEE +F+QMDEE
Sbjct: 849 FNTTSTAQDRREMLEEIMSKGTS--SLGEDVPSEREINRLAARTEEEFWMFEQMDEERRK 906
Query: 536 -EDWVEEMTQYDQVPRW 551
E++ + + +VP W
Sbjct: 907 KENYKTRLMEEKEVPEW 923
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/564 (38%), Positives = 312/564 (55%), Gaps = 66/564 (11%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++LIAYL+E KG GP+LI+ P AV+ NW +E TW+PS++ Y G + R + +
Sbjct: 439 ISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIA 498
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDL-DRYRCHRRLL 119
KFNVL+T Y+ IM D++ L KI+W Y+I+DE R+K+ +S LA+ L YR RRLL
Sbjct: 499 GEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLL 558
Query: 120 LTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVI 179
LTGTP+QN P +F++ + F +WF+ PF G L E++++
Sbjct: 559 LTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVS------LTDEEELL 612
Query: 180 IIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPED 239
IIHRLH ++ PF+LRR+ ++VE LP K ++L+C MSA Q Y V G + L
Sbjct: 613 IIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGS 672
Query: 240 EKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPF----FSDLSKEFIVKSCGKLW 295
K K +L N M+LRK CNHP Y F ++ K IV++ GK
Sbjct: 673 GKSK-------------SLQNLTMQLRKCCNHP---YLFVGGDYNMWKKPEIVRASGKFE 716
Query: 296 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN 355
+LDR+L KL++ GHR+LLFS MT+L+D+LE YL Y R+DGTT + R + FN
Sbjct: 717 LLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFN 776
Query: 356 SPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 415
PDS F+FLLS RA G GLNLQ+ADTV+I+D D NP+ ++QA RAHRIGQK+EV+V
Sbjct: 777 EPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFV 836
Query: 416 MEAVVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVIN 475
+ +V GS+E +I +Q K+ + +VI
Sbjct: 837 LVSV--------------------------------GSVEEVILERAKQ-KMGIDAKVIQ 863
Query: 476 AGRFDQXXXXXXXXXXXXXXXXXXXXYQETLHNVPSLQEVNRMIARNEEEVELFDQMDEE 535
AG F+ T +VPS +E+NR+ AR+E+E +F++MDEE
Sbjct: 864 AGLFNTTSTAQDRREMLEEIMRKGTSSLGT--DVPSEREINRLAARSEDEFWMFERMDEE 921
Query: 536 ----EDWVEEMTQYDQVPRWLRAT 555
E++ + Q +VP W T
Sbjct: 922 RRRKENYRARLMQEQEVPEWAYTT 945
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 312/553 (56%), Gaps = 79/553 (14%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++LI YLME K + GP L++VP++V+ W+SE++ W PS+ I Y G+ D R KLF +++
Sbjct: 790 ISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQI 849
Query: 61 LAMKFNVLVTTYEFIM--YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRL 118
+ KFNVL+TTYE++M +DR KLSKI W YIIIDE R+K+ L DL Y RL
Sbjct: 850 VHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRL 909
Query: 119 LLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKV 178
LLTGTPLQN+ P++F++ + F+ WF+KPFQ G +AE+ L E+ +
Sbjct: 910 LLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNG-ESSAEEALLSEEENL 968
Query: 179 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPE 238
+II+RLHQ+L PF+LRR VE LP K+ ++RC+ SA Q + V E
Sbjct: 969 LIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV----------E 1018
Query: 239 DEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLS----KEF---IVKSC 291
D I + + N MELR CNHP L+ +++ K F IV+ C
Sbjct: 1019 DNLGSIGN------AKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLC 1072
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAI 351
GKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL + Y R+DG TS DR + I
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 352 VDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV 411
FN S FIFLLSIRA G G+NLQ+ADTV+++D D NP+ + QA ARAHRIGQK++V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 412 KVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMAD 471
V+ E V S+E +R + ++K+ +A+
Sbjct: 1193 LVLRFETV--------------------------------NSVEEQVRASA-EHKLGVAN 1219
Query: 472 EVINAGRFDQXXXXXXXXXXXXXXXXXXXXYQETL-------HNVPSLQE--VNRMIARN 522
+ I AG FD Y E+L + P L + +N +IAR
Sbjct: 1220 QSITAGFFDN-----------NTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARR 1268
Query: 523 EEEVELFDQMDEE 535
E E+++F+ +D++
Sbjct: 1269 ESEIDIFESIDKQ 1281
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 312/553 (56%), Gaps = 79/553 (14%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++LI YLME K + GP L++VP++V+ W+SE++ W PS+ I Y G+ D R KLF +++
Sbjct: 790 ISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQI 849
Query: 61 LAMKFNVLVTTYEFIM--YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRL 118
+ KFNVL+TTYE++M +DR KLSKI W YIIIDE R+K+ L DL Y RL
Sbjct: 850 VHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRL 909
Query: 119 LLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKV 178
LLTGTPLQN+ P++F++ + F+ WF+KPFQ G +AE+ L E+ +
Sbjct: 910 LLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNG-ESSAEEALLSEEENL 968
Query: 179 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPE 238
+II+RLHQ+L PF+LRR VE LP K+ ++RC+ SA Q + V E
Sbjct: 969 LIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV----------E 1018
Query: 239 DEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLS----KEF---IVKSC 291
D I + + N MELR CNHP L+ +++ K F IV+ C
Sbjct: 1019 DNLGSIGN------AKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLC 1072
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAI 351
GKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL + Y R+DG TS DR + I
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 352 VDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV 411
FN S FIFLLSIRA G G+NLQ+ADTV+++D D NP+ + QA ARAHRIGQK++V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 412 KVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMAD 471
V+ E V S+E +R + ++K+ +A+
Sbjct: 1193 LVLRFETV--------------------------------NSVEEQVRASA-EHKLGVAN 1219
Query: 472 EVINAGRFDQXXXXXXXXXXXXXXXXXXXXYQETL-------HNVPSLQE--VNRMIARN 522
+ I AG FD Y E+L + P L + +N +IAR
Sbjct: 1220 QSITAGFFDN-----------NTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARR 1268
Query: 523 EEEVELFDQMDEE 535
E E+++F+ +D++
Sbjct: 1269 ESEIDIFESIDKQ 1281
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 312/553 (56%), Gaps = 79/553 (14%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++LI YLME K + GP L++VP++V+ W+SE++ W PS+ I Y G+ D R KLF +++
Sbjct: 790 ISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQI 849
Query: 61 LAMKFNVLVTTYEFIM--YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRL 118
+ KFNVL+TTYE++M +DR KLSKI W YIIIDE R+K+ L DL Y RL
Sbjct: 850 VHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRL 909
Query: 119 LLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKV 178
LLTGTPLQN+ P++F++ + F+ WF+KPFQ G +AE+ L E+ +
Sbjct: 910 LLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNG-ESSAEEALLSEEENL 968
Query: 179 IIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPE 238
+II+RLHQ+L PF+LRR VE LP K+ ++RC+ SA Q + V E
Sbjct: 969 LIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRV----------E 1018
Query: 239 DEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLS----KEF---IVKSC 291
D I + + N MELR CNHP L+ +++ K F IV+ C
Sbjct: 1019 DNLGSIGN------AKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLC 1072
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAI 351
GKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL + Y R+DG TS DR + I
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 352 VDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV 411
FN S FIFLLSIRA G G+NLQ+ADTV+++D D NP+ + QA ARAHRIGQK++V
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 412 KVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMAD 471
V+ E V S+E +R + ++K+ +A+
Sbjct: 1193 LVLRFETV--------------------------------NSVEEQVRASA-EHKLGVAN 1219
Query: 472 EVINAGRFDQXXXXXXXXXXXXXXXXXXXXYQETL-------HNVPSLQE--VNRMIARN 522
+ I AG FD Y E+L + P L + +N +IAR
Sbjct: 1220 QSITAGFFDN-----------NTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARR 1268
Query: 523 EEEVELFDQMDEE 535
E E+++F+ +D++
Sbjct: 1269 ESEIDIFESIDKQ 1281
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 293 bits (751), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 250/430 (58%), Gaps = 44/430 (10%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRS-----KL 55
++++ +L + GP L++VP + + NW E WLP ++ I YVG++ R +
Sbjct: 661 VSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEF 720
Query: 56 FSQEVLA--MKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYR 113
++++ + +KFN L+TTYE ++ D++ LSKI W Y+++DEA R+K+ ++ L L +
Sbjct: 721 YNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFS 780
Query: 114 CHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLE 173
+LL+TGTPLQN P F NK D F + ++ +E
Sbjct: 781 TKNKLLITGTPLQNSVEELWALLHFLDPGKFKNK----DEFVENYKNLSSFNESE----- 831
Query: 174 TEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSL 233
+ LH L P +LRR ++DVE SLPPK+ +LR +MS +Q Y W+ L
Sbjct: 832 -------LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWI-----L 879
Query: 234 RLDPEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL----NYPFFSDLSK----E 285
+ D + ++ N +L N +EL+K CNHP L ++ + D++ +
Sbjct: 880 ERNFHDLNKGVRGNQ-------VSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLD 932
Query: 286 FIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLE 345
I+ S GKL ILD++L++L+ T HRVL+FS M ++LDIL EYL R ++R+DG+T E
Sbjct: 933 KIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 992
Query: 346 DRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRI 405
R+ A+ FN+P SD F FLLS RA G G+NL +ADTVVI+D D NP+N+ QA++RAHRI
Sbjct: 993 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRI 1052
Query: 406 GQKREVKVIY 415
GQ+ EV IY
Sbjct: 1053 GQQ-EVVNIY 1061
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 32/417 (7%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++L+AYL E++G GPH+++ P + + NW +E+ + P + + ++G+ + R + +
Sbjct: 225 ISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLL 284
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
+A KF++ VT++E + +++ L + W+YIIIDEA R+K+ +S+L++ + + + RLL+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQN+ P++F + + F++WF Q G + E +
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWF----QISGENDQQE-----------V 389
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
+ +LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E
Sbjct: 390 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGE 449
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---NYPFFSDLSKEFIVKSCGKLWIL 297
+++ L N M+LRK CNHP L P + + ++ + GK+ +L
Sbjct: 450 RKR--------------LLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLL 495
Query: 298 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
D++L KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T ++R+++I +N P
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKP 555
Query: 358 DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 556 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 32/417 (7%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++L+AYL E++G GPH+++ P + + NW +E+ + P + + ++G+ + R + +
Sbjct: 225 ISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLL 284
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
+A KF++ VT++E + +++ L + W+YIIIDEA R+K+ +S+L++ + + + RLL+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQN+ P++F + + F++WF Q G + E +
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWF----QISGENDQQE-----------V 389
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
+ +LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E
Sbjct: 390 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGE 449
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---NYPFFSDLSKEFIVKSCGKLWIL 297
+++ L N M+LRK CNHP L P + + ++ + GK+ +L
Sbjct: 450 RKR--------------LLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLL 495
Query: 298 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
D++L KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T ++R+++I +N P
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKP 555
Query: 358 DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 556 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 32/417 (7%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++L+AYL E++G GPH+++ P + + NW +E+ + P + + ++G+ + R + +
Sbjct: 225 ISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLL 284
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
+A KF++ VT++E + +++ L + W+YIIIDEA R+K+ +S+L++ + + + RLL+
Sbjct: 285 VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 344
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQN+ P++F + + F++WF Q G + E +
Sbjct: 345 TGTPLQNNLHELWALLNFLLPEIFSSAETFDEWF----QISGENDQQE-----------V 389
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
+ +LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E
Sbjct: 390 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGE 449
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---NYPFFSDLSKEFIVKSCGKLWIL 297
+++ L N M+LRK CNHP L P + + ++ + GK+ +L
Sbjct: 450 RKR--------------LLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLL 495
Query: 298 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
D++L KL+ RVL+FS MT+LLDILE+YL +R +Y RIDG T ++R+++I +N P
Sbjct: 496 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKP 555
Query: 358 DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 556 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 284 bits (726), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 249/417 (59%), Gaps = 32/417 (7%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++L+AYL E++G GPH+++ P + + NW +E+ + P + + ++G+ + R + + +
Sbjct: 230 ISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELL 289
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
+A KF++ VT++E + +++ L + W+YIIIDEA R+K+ +S+L++ + + + RLL+
Sbjct: 290 VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 349
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQN+ P+VF + + F++WF Q G + E +
Sbjct: 350 TGTPLQNNLHELWALLNFLLPEVFSSAETFDEWF----QISGENDQQE-----------V 394
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
+ +LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E
Sbjct: 395 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGE 454
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---NYPFFSDLSKEFIVKSCGKLWIL 297
+++ L N M+LRK CNHP L P + + +V + GK+ +L
Sbjct: 455 RKR--------------LLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLL 500
Query: 298 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
D++L KL+ RVL+FS MT+LLDILE+YL +R Y RIDG T ++R+++I +N P
Sbjct: 501 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKP 560
Query: 358 DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 617
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 283 bits (725), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 249/417 (59%), Gaps = 32/417 (7%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
++L+AYL E++G GPH+++ P + + NW +E+ + P + + ++G+ + R + + +
Sbjct: 230 ISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELL 289
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLL 120
+A KF++ VT++E + +++ L + W+YIIIDEA R+K+ +S+L++ + + + RLL+
Sbjct: 290 VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLI 349
Query: 121 TGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVII 180
TGTPLQN+ P+VF + + F++WF Q G + E +
Sbjct: 350 TGTPLQNNLHELWALLNFLLPEVFSSAETFDEWF----QISGENDQQE-----------V 394
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDE 240
+ +LH++L PF+LRR DVE LPPK +L+ MS +Q Y + ++ E
Sbjct: 395 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGE 454
Query: 241 KRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---NYPFFSDLSKEFIVKSCGKLWIL 297
+++ L N M+LRK CNHP L P + + +V + GK+ +L
Sbjct: 455 RKR--------------LLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLL 500
Query: 298 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
D++L KL+ RVL+FS MT+LLDILE+YL +R Y RIDG T ++R+++I +N P
Sbjct: 501 DKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKP 560
Query: 358 DSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
S+ F+FLLS RA G G+NL +AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 561 GSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 617
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 263 bits (673), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 168/501 (33%), Positives = 259/501 (51%), Gaps = 84/501 (16%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
+AL+A L F+ N PHL+I P + + NW+ E TW P ++ + Y G+ R+ + E
Sbjct: 309 IALLASL--FEENLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEF 366
Query: 61 LA-----------------------MKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQR 97
+KF+VL+T+YE I D + L I W+ +I+DE R
Sbjct: 367 YLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHR 426
Query: 98 MKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKP 157
+K++DS L L +Y + R+LLTGTPLQN+ F + + F + F
Sbjct: 427 LKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI 486
Query: 158 FQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMS 217
Q+E I RLH++L P +LRR +DV +PPK ++LR +S
Sbjct: 487 NQEEQ------------------ISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLS 528
Query: 218 AIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYK-----TLSNRCMELRKTCNHP 272
++Q Y + + NYQ + K +L+N MELRK C HP
Sbjct: 529 SLQKEYYKAIFTR------------------NYQVLTKKGGAQISLNNIMMELRKVCCHP 570
Query: 273 LL---NYPFFSDLSKEF--IVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEY 327
+ P D ++ F +++SCGKL +LD++++KL+ GHRVL+++ +LD+LE+Y
Sbjct: 571 YMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDY 630
Query: 328 LQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYD 387
++ Y RIDG +R+ I FN+ +S+ F FLLS RA G G+NL +ADTV+IYD
Sbjct: 631 CTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYD 690
Query: 388 PDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGK 447
D NP + QA+ARAHR+GQ +V +IY ++++ + E+ +L V +E +VGK
Sbjct: 691 SDWNPHADLQAMARAHRLGQTNKV-MIY--RLINRGTIEERMMQLTKKKMV-LEHLVVGK 746
Query: 448 DRYIGSIESLIRNNIQQYKID 468
L NI Q ++D
Sbjct: 747 ---------LKTQNINQEELD 758
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/459 (35%), Positives = 243/459 (52%), Gaps = 59/459 (12%)
Query: 4 IAYLME-FKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEVL- 61
IA+L F+ N PHL++ P + + NW+ E TW P ++ + Y G + R ++ E
Sbjct: 261 IAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF 320
Query: 62 ----AMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRR 117
KF+VL+TTYE + S LS I W +IIDE R+K++ S L L ++
Sbjct: 321 SEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHI 380
Query: 118 LLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKK 177
+LLTGTPLQN+ D F + + F D N E+
Sbjct: 381 VLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDI------------NKEEQ------- 421
Query: 178 VIIIHRLHQILEPFMLRRRVEDV-EGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLD 236
I RLHQ+L P +LRR +DV + +PPK ++LR MS+ Q +Y V +
Sbjct: 422 ---ISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITN------ 472
Query: 237 PEDEKRKIQKNPNYQEKSYK---TLSNRCMELRKTCNHPLL---NYPFFSDLSKEF--IV 288
NYQ + K +SN M+LR+ C+HP L P F D ++ F ++
Sbjct: 473 ------------NYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLL 520
Query: 289 KSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRE 348
++ GKL +LD++++KL+ GHRVL+++ L +LE+Y ++ Y RIDG S +R+
Sbjct: 521 EASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQ 580
Query: 349 SAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQK 408
I FN+ +S+ F FLLS RA G G+NL +ADTV+IYD D NP + QA+AR HR+GQ
Sbjct: 581 VRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQT 640
Query: 409 REVKVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGK 447
+V +IY ++ K + E+ E+ + +E +VGK
Sbjct: 641 NKV-MIY--RLIHKGTVEERMMEITKNKML-LEHLVVGK 675
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 247 bits (631), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 226/425 (53%), Gaps = 55/425 (12%)
Query: 4 IAYLME-FKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEVL- 61
IA+L F+ N PHL++ P + + NW+ E TW P ++ + Y G + R ++ E
Sbjct: 220 IAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF 279
Query: 62 ----AMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRR 117
KF+VL+TTYE + S LS I W +IIDE R+K++ S L L ++
Sbjct: 280 SEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHI 339
Query: 118 LLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKK 177
+LLTGTPLQN+ D F + + F D N E+
Sbjct: 340 VLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDI------------NKEEQ------- 380
Query: 178 VIIIHRLHQILEPFMLRRRVEDV-EGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLD 236
I RLHQ+L P +LRR +DV + +PPK ++LR MS+ Q +Y V +
Sbjct: 381 ---ISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITN------ 431
Query: 237 PEDEKRKIQKNPNYQEKSYK---TLSNRCMELRKTCNHPLL---NYPFFSDLSKEF--IV 288
NYQ + K +SN M+LR+ C+HP L P F D ++ F ++
Sbjct: 432 ------------NYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLL 479
Query: 289 KSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRE 348
++ GKL +LD++++KL+ GHRVL+++ L +LE+Y ++ Y RIDG S +R+
Sbjct: 480 EASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQ 539
Query: 349 SAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQK 408
I FN+ +S+ F FLLS RA G G+NL +ADTV+IYD D NP + QA+AR HR+GQ
Sbjct: 540 VRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQT 599
Query: 409 REVKV 413
+V +
Sbjct: 600 NKVMI 604
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 246 bits (628), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 246/462 (53%), Gaps = 36/462 (7%)
Query: 4 IAYLMEFKGNY--GPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV- 60
I +L KGN GP+L+I P + + NW +E+ + PS++ I Y G K+ R +L + +
Sbjct: 238 IGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMP 297
Query: 61 --LAMKFNVLVTTYEFIMYDRSK-LSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRR 117
+ KF +++T+YE M D + L WKY++IDE R+K+ L R+L + +
Sbjct: 298 KTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNK 357
Query: 118 LLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKK 177
LLLTGTPLQN+ PD+F + F WF F ++ ++ +++ E +++
Sbjct: 358 LLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFD--FSEKNKNEATKEE--EEKRR 413
Query: 178 VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDP 237
++ +LH IL PF+LRR DVE SLP K I++ M+ Q + L
Sbjct: 414 AQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQE--------HLVN 465
Query: 238 EDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHP-LLN--------YPFFSDLSKEFIV 288
+ + +N + L+N ++LRK CNHP LL YP E IV
Sbjct: 466 NTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYP-----PVEEIV 520
Query: 289 KSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRE 348
CGK +L+R+L++L H+VL+FS TKLLDI++ Y + RIDG+ L++R
Sbjct: 521 GQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERR 580
Query: 349 SAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQK 408
I DF+ S C IFLLS RA G G+NL +ADT ++YD D NP+ + QA+ R HRIGQ
Sbjct: 581 RQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT 640
Query: 409 REVKVIYMEAVVDKISSHEKEDELRSGSTVDMEDELVGKDRY 450
+ V V + S E R+ S + +E ++G+ ++
Sbjct: 641 KPVHVYRLSTA----QSIETRVLKRAYSKLKLEHVVIGQGQF 678
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 246 bits (627), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 260/479 (54%), Gaps = 52/479 (10%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSK----DYRSKLF 56
++ ++YL +G GP L++ P +V W SE++ + P++ + YVG K D R ++
Sbjct: 88 ISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY 147
Query: 57 SQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDL-DRYRCH 115
+ F+VL+TTY+ + D+ LS+I W+Y IIDEAQR+K+ +SVL L +++
Sbjct: 148 DHGHF-LPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIP 206
Query: 116 RRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETE 175
RRLL+TGTP+QN+ P VF D F F++ G + +D ET
Sbjct: 207 RRLLITGTPIQNNLTELWALMHFCMPLVFGTL----DQFLSAFKETGDGLDVSND-KETY 261
Query: 176 KKVIIIHRLHQILEPFMLRRR----VEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTG 231
K L IL FMLRR +E LPP + + + ++Q IY T
Sbjct: 262 KS------LKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIY-----TS 310
Query: 232 SLRLDPEDEKRKIQKNPNYQEKS-----YKTLSNRCMELRKTCNHPLLN-----YPFFSD 281
LR ++ P E S + +L N ++LRK C+HP L PF
Sbjct: 311 ILR----------KELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEG 360
Query: 282 LSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGT 341
E +V++ GKL +LD++L +L +GHRVLLFS MT LDIL+++++ RR Y R+DG+
Sbjct: 361 ---EHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGS 417
Query: 342 TSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVAR 401
E+R +AI +F+ S+ F+F++S RA G GLNL +ADTV+ Y+ D NP+ ++QA+ R
Sbjct: 418 VRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 477
Query: 402 AHRIGQKREVKVIYM--EAVVDKISSHEKEDELRSGSTVDMEDELVGKDRYIGSIESLI 458
AHRIGQ V I + E V+++ E +L+ V + D + K+ G + SL+
Sbjct: 478 AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNV-VGDNMEEKEEDGGDLRSLV 535
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 263/494 (53%), Gaps = 63/494 (12%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSK----DYRSKLF 56
++ ++YL +G GP L++ P +V W SE++ + P++ + YVG K D R ++
Sbjct: 88 ISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMY 147
Query: 57 -----SQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDL-D 110
S + + F+VL+TTY+ + D+ LS+I W+Y IIDEAQR+K+ +SVL L +
Sbjct: 148 DHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLE 207
Query: 111 RYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDD 170
++ RRLL+TGTP+QN+ P VF D F F++ G + D
Sbjct: 208 QFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTL----DQFLSAFKETGDGLSGLD- 262
Query: 171 WLETEKKVIIIHRLHQILEPFMLRRR----VEDVEGSLPPKVSIVLRCKMSAIQSAIYDW 226
+ +K+ L IL FMLRR +E LPP + + + ++Q IY
Sbjct: 263 -VSNDKETY--KSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIY-- 317
Query: 227 VKSTGSLRLDPEDEKRKIQKNPNYQEKS-----YKTLSNRCMELRKTCNHPLLN-----Y 276
T LR ++ P E S + +L N ++LRK C+HP L
Sbjct: 318 ---TSILR----------KELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPE 364
Query: 277 PFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYR 336
PF E +V++ GKL +LD++L +L +GHRVLLFS MT LDIL+++++ RR Y
Sbjct: 365 PFEEG---EHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYE 421
Query: 337 RIDGTTSLEDRESAIVDFNSPD----------SDCFIFLLSIRAAGRGLNLQSADTVVIY 386
R+DG+ E+R +AI +F++ S+ F+F++S RA G GLNL +ADTV+ Y
Sbjct: 422 RLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFY 481
Query: 387 DPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSHEKEDELRSGSTVDMEDEL 444
+ D NP+ ++QA+ RAHRIGQ V I + E V+++ E +L+ V + D +
Sbjct: 482 EQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNV-VGDNM 540
Query: 445 VGKDRYIGSIESLI 458
K+ G + SL+
Sbjct: 541 EEKEEDGGDLRSLV 554
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 249/476 (52%), Gaps = 70/476 (14%)
Query: 5 AYLMEFKGNYG---PHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGS-------KDYR-- 52
A+L +G P L++VP + M NW SE W P ++ + Y GS +DY
Sbjct: 726 AFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWH 785
Query: 53 ---SKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDL 109
S +++ + KFNVL+TTYE ++ D S L + W+ +++DE R+K+ +S L L
Sbjct: 786 AKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLL 845
Query: 110 DRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAED 169
+ + R+LLTGTPLQN+ P F + +F + F
Sbjct: 846 NTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFH-------------- 891
Query: 170 DWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKS 229
D EK + L +++ P MLRR +D ++PPK ++ ++++IQ+ Y + +
Sbjct: 892 DLTSAEK----VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLT 947
Query: 230 TGSLRLDPEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL---------NYPFFS 280
L R I K Q ++ N M+LRK CNHP L + F
Sbjct: 948 KNYQIL------RNIGKGVAQQ-----SMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLH 996
Query: 281 DLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL--QWRRLVYRRI 338
D+ +K+ KL +L +L L + GHRVL+FS MTKLLDILE+YL ++ + R+
Sbjct: 997 DMR----IKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERV 1052
Query: 339 DGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA 398
DG+ ++ DR++AI FN D + F+FLLS RA G G+NL +ADTV+IYD D NP + QA
Sbjct: 1053 DGSVAVADRQAAIARFNQ-DKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQA 1111
Query: 399 VARAHRIGQKREV---KVIYMEAVVDKISSHEKE----DEL---RSGSTVDMEDEL 444
+ RAHRIGQ + + +++ +V ++I K+ D+L +SGS + ED L
Sbjct: 1112 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDIL 1167
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 186 bits (472), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 221/492 (44%), Gaps = 106/492 (21%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
+ + L + GPHL++ P +V+ NW+ EL W PS + + Y G+ +S+E+
Sbjct: 250 ITYLTLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAA---RAAYSREL 306
Query: 61 LAMK-------FNVLVTTYEFIMY-------DRSKLSKIDWKYIIIDEAQRMKDRDSVLA 106
++ FNVL+ Y DR L + W +++DEA +KD++S
Sbjct: 307 NSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRW 366
Query: 107 RDLDRY--RCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVF-----DNKKAFNDWFSKPFQ 159
++L ++RL+LTGTPLQND PD+F D KK N
Sbjct: 367 KNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLN-------- 418
Query: 160 KEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAI 219
AED TE +I R+ IL PF+LRR DV L PK+ V M
Sbjct: 419 -------AED----TE----LITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERK 463
Query: 220 QSAIYDWVKSTGSLRLDPEDEKRKIQ-KNPNYQEKSY--KTLSNRCMELRKTCNHPLLNY 276
Q Y ++ R + K+ K+ N K+ + +SN + RK NHPLL
Sbjct: 464 QEDAYK--EAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIR 521
Query: 277 PFFSD----------------------------------------------------LSK 284
+SD LS
Sbjct: 522 RIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSD 581
Query: 285 EFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSL 344
+ ++ S K L +L ++++GHRVL+FS T +LDILE L + YRR+DG+T +
Sbjct: 582 KHVMLS-AKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQV 640
Query: 345 EDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHR 404
DR++ + FN+ D F LLS RA G+GLNL ADTV+I+D D NP+ + QA R HR
Sbjct: 641 TDRQTIVDTFNN-DKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHR 699
Query: 405 IGQKREVKVIYM 416
IGQ + V + +
Sbjct: 700 IGQTKPVTIFRL 711
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 221/476 (46%), Gaps = 67/476 (14%)
Query: 18 LIIVPNAVMVNWKSELHTWLPS-VSCIFYVGSK--DYRSKLFSQEVLAMKFNVLVTTYEF 74
+I+ P +++ NW++E+ W+ + I S D S + S VL+ +YE
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYET 302
Query: 75 IMYDRSKLSKID-WKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXX 133
SK + + +I DEA R+K+ ++ R L C RR+LL+GTP+QND
Sbjct: 303 FRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFF 362
Query: 134 XXXXXXXPDVFDNKKAFNDWFSKPF-QKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFM 192
P + F ++ P P+ E+ L ++ + +++Q F+
Sbjct: 363 AMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ----FI 418
Query: 193 LRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQE 252
LRR + LPPK+ V+ CKM+ +QS +Y+ S+ +L KR + N
Sbjct: 419 LRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNL-------KRALADNA---- 467
Query: 253 KSYKTLSNRCMELRKTCNHPLLNY----------------------PFFSDLSKEFI--- 287
K K L+ L+K CNHP L Y FS S +
Sbjct: 468 KQTKVLA-YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGD 526
Query: 288 ---VKSCGKLWILDRILIKLQR-TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTS 343
V+ GK+ +L R+L L+R T R++L S T+ LD+ + + RR + R+DG+T+
Sbjct: 527 GAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTT 586
Query: 344 LEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAH 403
+ R+ + N P D F FLLS +A G GLNL A+ +V++DPD NP N++QA AR
Sbjct: 587 ISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVW 646
Query: 404 RIGQKREVKV------------IYMEAV----VDKISSHEKED-ELRSGSTVDMED 442
R GQK+ V V +Y + + K+ HE+ D R G+ + ED
Sbjct: 647 RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTED 702
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 217/476 (45%), Gaps = 69/476 (14%)
Query: 18 LIIVPNAVMVNWKSELHTWLPS-VSCIFYVGSK--DYRSKLFSQEVLAMKFNVLVTTYEF 74
+I+ P +++ NW++E+ W+ + I S D S + S VL+ +YE
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYET 302
Query: 75 IMYDRSKLSKID-WKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXX 133
SK + + +I DEA R+K+ ++ R L C RR+LL+GTP+QND
Sbjct: 303 FRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFF 362
Query: 134 XXXXXXXPDVFDNKKAFNDWFSKPF-QKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFM 192
P + F ++ P P+ E+ L ++ + +++Q F+
Sbjct: 363 AMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQ----FI 418
Query: 193 LRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQE 252
LRR + LPPK+ V+ CKM+ +Q+ G L + KR + N
Sbjct: 419 LRRTNALLSNHLPPKIIEVVCCKMTTLQTTY------NGCLCMQL---KRALADNA---- 465
Query: 253 KSYKTLSNRCMELRKTCNHPLLNY----------------------PFFSDLSKEFI--- 287
K K L+ L+K CNHP L Y FS S +
Sbjct: 466 KQTKVLA-YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGD 524
Query: 288 ---VKSCGKLWILDRILIKLQR-TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTS 343
V+ GK+ +L R+L L+R T R++L S T+ LD+ + + RR + R+DG+T+
Sbjct: 525 GAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTT 584
Query: 344 LEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAH 403
+ R+ + N P D F FLLS +A G GLNL A+ +V++DPD NP N++QA AR
Sbjct: 585 ISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVW 644
Query: 404 RIGQKREVKV------------IYMEAV----VDKISSHEKED-ELRSGSTVDMED 442
R GQK+ V V +Y + + K+ HE+ D R G+ + ED
Sbjct: 645 RDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTED 700
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 144/278 (51%), Gaps = 29/278 (10%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEV 60
+AL+A+L KG +GPHLI+VP +VM+NW++E W P+ + Y GS R KL Q
Sbjct: 572 IALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER-KLKRQGW 630
Query: 61 LAMK-FNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLL 119
+ + F+V +TTY ++ D + WKY+I+DEA +K+ S + L + RR+L
Sbjct: 631 MKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRIL 690
Query: 120 LTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVI 179
LTGTPLQND P VF + + F DWF P +E ++K+
Sbjct: 691 LTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIA----------GMVEGQEKIN 740
Query: 180 --IIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIY-DWVKSTGSLRLD 236
+I RLH +L PF+LRR DVE LP K V+ C++S Q +Y D++ ST
Sbjct: 741 KEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIAST------ 794
Query: 237 PEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL 274
+ S+ + + M+LRK CNHP L
Sbjct: 795 --------ETQATLTSGSFFGMISIIMQLRKVCNHPDL 824
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 6/167 (3%)
Query: 247 NPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQR 306
+P+Y+EK LS +R + +P + I CGKL L +L KL+
Sbjct: 1035 SPSYKEKVTDLLSPLLSPIRPAIVRRQVYFP-----DRRLIQFDCGKLQELAMLLRKLKF 1089
Query: 307 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLL 366
GHR L+F+ MTK+LD+LE ++ Y R+DG+T E+R++ + FN+ + F+F+L
Sbjct: 1090 GGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKIFLFIL 1148
Query: 367 SIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKV 413
S R+ G G+NL ADTV+ YD D NP ++QA R HRIGQ REV +
Sbjct: 1149 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHI 1195
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 206/449 (45%), Gaps = 55/449 (12%)
Query: 1 MALIAYL--MEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSC-IFYVGSKDY------ 51
+ ++++L + F Y P +II P ++ W+ E W P I + ++D
Sbjct: 418 IQVLSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQ 477
Query: 52 --------------------RSK------LFSQEVLAMKFNVLVTTYEFIMYDRSKLSKI 85
+SK VL + +L+TTYE + KL I
Sbjct: 478 GKASESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNI 537
Query: 86 DWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFD 145
+W Y ++DE R+++ +S + + + R+++TG P+QN P
Sbjct: 538 EWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLG 597
Query: 146 NKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 205
F FS P G + NA + T + ++ L ++ P++LRR DV L
Sbjct: 598 VLPVFEAEFSVPITVGGYA-NASPLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAHLT 654
Query: 206 PKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKTLSNRCMEL 265
K VL C ++ Q + Y ++ + ++ +N Y +
Sbjct: 655 KKTEHVLFCSLTVEQRSTYRAFLASSEV-----EQIFDGNRNSLYG----------IDVM 699
Query: 266 RKTCNHPLLNYPFFSDLSKEF-IVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDIL 324
RK CNHP L S + ++ + GK+ ++ +L ++ GHRVLLFS ++LDIL
Sbjct: 700 RKICNHPDLLEREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDIL 759
Query: 325 EEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVV 384
E +L YRR+DG T ++ R + I +FN+ + D F+F+L+ + G G NL A+ V+
Sbjct: 760 ESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSE-DMFVFVLTTKVGGLGTNLTGANRVI 818
Query: 385 IYDPDPNPKNEEQAVARAHRIGQKREVKV 413
I+DPD NP N+ QA RA RIGQK++V V
Sbjct: 819 IFDPDWNPSNDMQARERAWRIGQKKDVTV 847
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 33/310 (10%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRS------- 53
MA +A+L E K +GP L++ P +V+ NW E+ + P + + Y G R+
Sbjct: 622 MAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNIN 681
Query: 54 --KLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDR 111
+++ ++ F++L+T+Y+ ++ D ++ W+Y+++DEAQ +K S+ + L
Sbjct: 682 PKRMYRRDA---GFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLS 738
Query: 112 YRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDW 171
+ C RLLLTGTP+QN+ P +FDN FN+WFSK G +AE
Sbjct: 739 FNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSK-----GIENHAEHGG 793
Query: 172 LETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTG 231
E + ++RLH IL+PFMLRR +DV L K + + CK+S+ Q A Y +K+
Sbjct: 794 TLNEHQ---LNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKI 850
Query: 232 SLRLDPEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL-------NYPFFSDLSK 284
SL + D R + +K L N ++LRK CNHP L +Y +F S
Sbjct: 851 SL-AELFDSNRG-----QFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVTSN 904
Query: 285 EFIVKSCGKL 294
+ G+L
Sbjct: 905 SLLPHPFGEL 914
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
Query: 287 IVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLED 346
++ GKL LD +L +L+ HRVLLF+ MTK+L+ILE+Y+ +R+ Y R+DG++++ D
Sbjct: 1201 LLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD 1260
Query: 347 RESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIG 406
R + DF SD F+FLLS RA G G+NL +ADTV+ Y+ D NP + QA+ RAHR+G
Sbjct: 1261 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1319
Query: 407 QKREVKV---IYMEAVVDKI 423
Q ++V V I E V +KI
Sbjct: 1320 QTKDVTVYRLICKETVEEKI 1339
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 202/443 (45%), Gaps = 58/443 (13%)
Query: 16 PHLIIVPNAVMVNWKSELHTW--LPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYE 73
P +I+ P+ ++ +W E+ + L +S + YVGS R L Q NV++T+Y+
Sbjct: 1508 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQ---FNNHNVIITSYD 1564
Query: 74 FIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXX 133
+ D L++ W Y I+DE +K+ S + + + + RL+L+GTP+QN+
Sbjct: 1565 VVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELW 1624
Query: 134 XXXXXXXPDVFDNKKAFNDWFSKPF-QKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFM 192
P ++ F + KP P +A+D E V+ + LH+ + PF+
Sbjct: 1625 SLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKD----AEAGVLAMEALHKQVMPFL 1680
Query: 193 LRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGS-------LRLDPEDEKRKIQ 245
LRR E+V LP K+ C +S +Q +Y+ + + +++D +
Sbjct: 1681 LRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNAD 1740
Query: 246 KNPNYQEKSYKTLSNRCMELRKTCNHPLL------NYPFFSDLSKEFIVKSCG------- 292
P K+ + L K C+HPLL P SDL+ ++ C
Sbjct: 1741 VAPT---KASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAA--MINGCSDIITELH 1795
Query: 293 ------KLWILDRILIK-------------LQRTGHRVLLFSTMTKLLDILEEYL---QW 330
KL L IL + L HRVL+F+ LLDI+E+ L
Sbjct: 1796 KVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHM 1855
Query: 331 RRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDP 390
+ + Y R+DG+ E R + FNS D + LL+ G GLNL SADT+V + D
Sbjct: 1856 KSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDW 1914
Query: 391 NPKNEEQAVARAHRIGQKREVKV 413
NP + QA+ RAHR+GQKR V V
Sbjct: 1915 NPMRDHQAMDRAHRLGQKRVVNV 1937
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 202/443 (45%), Gaps = 58/443 (13%)
Query: 16 PHLIIVPNAVMVNWKSELHTW--LPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYE 73
P +I+ P+ ++ +W E+ + L +S + YVGS R L Q NV++T+Y+
Sbjct: 1539 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQ---FNNHNVIITSYD 1595
Query: 74 FIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXX 133
+ D L++ W Y I+DE +K+ S + + + + RL+L+GTP+QN+
Sbjct: 1596 VVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELW 1655
Query: 134 XXXXXXXPDVFDNKKAFNDWFSKPF-QKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFM 192
P ++ F + KP P +A+D E V+ + LH+ + PF+
Sbjct: 1656 SLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKD----AEAGVLAMEALHKQVMPFL 1711
Query: 193 LRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGS-------LRLDPEDEKRKIQ 245
LRR E+V LP K+ C +S +Q +Y+ + + +++D +
Sbjct: 1712 LRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNAD 1771
Query: 246 KNPNYQEKSYKTLSNRCMELRKTCNHPLL------NYPFFSDLSKEFIVKSCG------- 292
P K+ + L K C+HPLL P SDL+ ++ C
Sbjct: 1772 VAPT---KASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAA--MINGCSDIITELH 1826
Query: 293 ------KLWILDRILIK-------------LQRTGHRVLLFSTMTKLLDILEEYL---QW 330
KL L IL + L HRVL+F+ LLDI+E+ L
Sbjct: 1827 KVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHM 1886
Query: 331 RRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDP 390
+ + Y R+DG+ E R + FNS D + LL+ G GLNL SADT+V + D
Sbjct: 1887 KSVTYMRLDGSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDW 1945
Query: 391 NPKNEEQAVARAHRIGQKREVKV 413
NP + QA+ RAHR+GQKR V V
Sbjct: 1946 NPMRDHQAMDRAHRLGQKRVVNV 1968
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 212/460 (46%), Gaps = 65/460 (14%)
Query: 15 GPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEF 74
GP LII P++++ NW+SE W Y GS + +++ A VLVT+++
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSN---RDMILEKLKARGVEVLVTSFDT 255
Query: 75 IMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXX 134
LS I+W+ +I DEA R+K+ S L + +R+ LTGT +QN
Sbjct: 256 FRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFN 315
Query: 135 XXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLR 194
P ++ F D++ +P K G A + +++ K L +L +MLR
Sbjct: 316 LFEWVAPGSLGTREHFRDFYDEPL-KLGQRATAPERFVQIADKR--KQHLGSLLRKYMLR 372
Query: 195 RRVEDVEGSL-PPKVSIVLRCKMSAIQSAIY---------------DWVKSTGSLRLDPE 238
R E+ G L K V+ C+MS +Q +Y D + GS E
Sbjct: 373 RTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSE 432
Query: 239 DEKRKIQKNP--NYQEKSYKTLSNRC---------MELRKTCNHPLLNYP---------- 277
+R + +Y + + C M+L++ NH L P
Sbjct: 433 CCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKPNPKDEPEKQK 492
Query: 278 ---------FFSDL--------SKEFI----VKSCGKLWILDRILIKLQRTGHRVLLFST 316
F +D+ SK F+ VK CGK+ L++++ G ++LLFS
Sbjct: 493 KDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWISKGDKILLFSY 552
Query: 317 MTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLN 376
++LDILE++L + + R+DG+T R+S + DFN+ S +FL+S +A G GLN
Sbjct: 553 SVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ-VFLISTKAGGLGLN 611
Query: 377 LQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 416
L SA+ VVI+DP+ NP ++ QA R+ R GQKR V V +
Sbjct: 612 LVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRL 651
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 60/340 (17%)
Query: 1 MALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKL----- 55
MA +A+L E K +GP L++ P +V+ NW E+ + P + + Y G R+ L
Sbjct: 622 MAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNIN 681
Query: 56 ------FSQEVLAMK----------------------------FNVLVTTYEFIMYDRSK 81
FS +++ F++L+T+Y+ ++ D
Sbjct: 682 PKRVMFFSTWIISFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKY 741
Query: 82 LSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXP 141
++ W+Y+++DEAQ +K S+ + L + C RLLLTGTP+QN+ P
Sbjct: 742 FRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMP 801
Query: 142 DVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVE 201
+FDN FN+WFSK G +AE E + ++RLH IL+PFMLRR +DV
Sbjct: 802 MLFDNHDQFNEWFSK-----GIENHAEHGGTLNEHQ---LNRLHAILKPFMLRRVKKDVV 853
Query: 202 GSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKTLSNR 261
L K + + CK+S+ Q A Y +K+ SL + D R + +K L N
Sbjct: 854 SELTTKTEVTVHCKLSSRQQAFYQAIKNKISL-AELFDSNRG-----QFTDKKVLNLMNI 907
Query: 262 CMELRKTCNHPLL-------NYPFFSDLSKEFIVKSCGKL 294
++LRK CNHP L +Y +F S + G+L
Sbjct: 908 VIQLRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGEL 947
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
Query: 287 IVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLED 346
++ GKL LD +L +L+ HRVLLF+ MTK+L+ILE+Y+ +R+ Y R+DG++++ D
Sbjct: 1234 LLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD 1293
Query: 347 RESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIG 406
R + DF SD F+FLLS RA G G+NL +ADTV+ Y+ D NP + QA+ RAHR+G
Sbjct: 1294 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1352
Query: 407 QKREVKV---IYMEAVVDKI 423
Q ++V V I E V +KI
Sbjct: 1353 QTKDVTVYRLICKETVEEKI 1372
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 196/452 (43%), Gaps = 81/452 (17%)
Query: 18 LIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEFIMY 77
L++ P ++ +W EL T S Y G+ + +L K +L+TTY+ +
Sbjct: 429 LVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK-GILLTTYDIVRN 487
Query: 78 DRSKLSKID------------WKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPL 125
+ L D W Y+I+DE +K+ ++ A+ L R++++GTP+
Sbjct: 488 NTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPI 547
Query: 126 QNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQK---EGPSQNAEDDWLETEKKVIIIH 182
QN+ P + +K +WF + ++ G +NA D E +
Sbjct: 548 QNNLKELWALFNFSCPGLLGDK----NWFKQNYEHYILRGTDKNATDR--EQRIGSTVAK 601
Query: 183 RLHQILEPFMLRRRVEDVEG------SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLD 236
L + ++PF LRR +V G L K IV+ +++A Q +Y+ L+
Sbjct: 602 NLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAF-------LN 654
Query: 237 PEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYP---------FFSDLSKE-- 285
E +P L+ + L+K C+HPLL S L++E
Sbjct: 655 SEIVLSAFDGSP---------LAALTI-LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEA 704
Query: 286 ------------------FIVK----SCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDI 323
F K SC KL + +L L GHRVL+FS K+L++
Sbjct: 705 GVAERLAMHIADNVDTDDFQTKNDSISC-KLSFIMSLLENLIPEGHRVLIFSQTRKMLNL 763
Query: 324 LEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTV 383
+++ L + RIDGTT DR + +F IFLL+ + G GL L AD V
Sbjct: 764 IQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHV-APIFLLTSQVGGLGLTLTKADRV 822
Query: 384 VIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 415
++ DP NP + Q+V RA+RIGQ ++V ++Y
Sbjct: 823 IVVDPAWNPSTDNQSVDRAYRIGQTKDV-IVY 853
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 207/500 (41%), Gaps = 89/500 (17%)
Query: 15 GPHLIIVPNAVMVNWKSELH--TWLPSVSCIFYVGSKDYRS--KLFSQEVLAMKFNVLVT 70
G L++VP + W E+ T S + Y G K ++ KL + + + ++
Sbjct: 190 GHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVEN 249
Query: 71 TY---EFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQN 127
Y E + S L I W II+DEA +K+R S A+ + R L+GTPLQN
Sbjct: 250 EYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQN 309
Query: 128 DXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQI 187
D + F ++ + S F+ + + V + +
Sbjct: 310 DVDELYSLVSYSFLNFF-----YSTYASFAFRHTH---------ITFARNVTVKFLIGGN 355
Query: 188 LEPFMLRRRVEDVEGSLPPKVSIVL----RCKMSAIQSAIYDWVKSTGSLRLDPEDEKRK 243
+ P + R+E+V L +++ L R +S +++ Y+ + D +
Sbjct: 356 ILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGT 415
Query: 244 IQKNPNYQEKSYKTLSNRCMELRKTCNHP-LLNYP--------------------FFSDL 282
+ N Y + + LR+ +HP L++Y F D
Sbjct: 416 LMNN-------YAHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDP 468
Query: 283 SKEFIVKSC------GKL------WILDRILIKLQRTGHRV------------------- 311
SK++ V S KL IL+RI + +T ++
Sbjct: 469 SKDYFVTSSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKA 528
Query: 312 LLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAA 371
++FS T LD++ L + ++ G+ S +++A+ +F + DC + L+S++A
Sbjct: 529 IVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKE-EPDCRVLLMSLQAG 587
Query: 372 GRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI--YMEAVVDK--ISSHE 427
G LNL +A V + DP NP E QA R HRIGQ + V+V+ ME V++ ++ +
Sbjct: 588 GVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQK 647
Query: 428 KEDELRSGSTVDMEDELVGK 447
K+++L + D E+ +V K
Sbjct: 648 KKEDLFESTLGDSEEAVVQK 667
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 307 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNS-PDSDCFIFL 365
G + ++F+ TK+LD+LE L+ + YRR DG ++ R++A+ DFN+ PD + +
Sbjct: 1070 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS--VMI 1127
Query: 366 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
+S++AA GLN+ +A V++ D NP E+QA+ RAHRIGQ R VKV+
Sbjct: 1128 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVV 1176
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 46/274 (16%)
Query: 18 LIIVPNAVMVNWKSELH---TWLPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEF 74
LI+ P ++M W EL T +S + Y G S+ LA K++V++TTY
Sbjct: 636 LIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGC----SRTKDPHELA-KYDVVITTYSL 690
Query: 75 IM-----------YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGT 123
+ + L+++ W +++DEAQ +K+ + + RR L+GT
Sbjct: 691 VSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGT 750
Query: 124 PLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHR 183
P+QN D + + + F + P P + +
Sbjct: 751 PIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSY-PGEGYK--------------T 795
Query: 184 LHQILEPFMLRRRVED-VEG----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPE 238
L IL+ MLRR + ++G SLPPK + R + + Y L D
Sbjct: 796 LQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFY------SKLECDSR 849
Query: 239 DEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHP 272
D+ ++ + ++ +Y + + LR+ C HP
Sbjct: 850 DQFKEYAEAGTVKQ-NYVNILLMLLRLRQACGHP 882
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 307 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNS-PDSDCFIFL 365
G + ++F+ TK+LD+LE L+ + YRR DG ++ R++A+ DFN+ PD + +
Sbjct: 1113 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS--VMI 1170
Query: 366 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 414
+S++AA GLN+ +A V++ D NP E+QA+ RAHRIGQ R VKV+
Sbjct: 1171 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVV 1219
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 302 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDC 361
+ ++ G + ++FS TK+L++LE L + YRR+DGT S+ R+ A+ DFN+ +
Sbjct: 959 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEV 1017
Query: 362 FIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM---EA 418
+ ++S++AA GLN+ +A V++ D NP E+QA+ RAHRIGQ R V V+ +
Sbjct: 1018 TVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDT 1077
Query: 419 VVDKISSHEKEDELRSGSTVDMEDE 443
V D+I + +++ + S EDE
Sbjct: 1078 VEDRILALQQKKRMMVASAFG-EDE 1101
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 116/317 (36%), Gaps = 87/317 (27%)
Query: 18 LIIVPNAVMVNWKSELHTWLPS---VSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEF 74
L++ P +VM W ELH + S +S + Y GS S+ LA K++V+VTT+
Sbjct: 510 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGS----SRTKDPHELA-KYDVVVTTFSI 564
Query: 75 IMYDRSK----------------------------------------------------L 82
+ + K L
Sbjct: 565 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 624
Query: 83 SKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPD 142
+K+ W +++DEAQ +K+ + +AR R RR L+GTP+QN D
Sbjct: 625 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 684
Query: 143 VFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRR-RVEDVE 201
+ + F P T V +L IL+ MLRR + ++
Sbjct: 685 PYSSYVLFCSTIKNPI---------------TRNPVKGYQKLQAILKTVMLRRTKGSLLD 729
Query: 202 G----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKT 257
G SLPPK + + + + Y +++ + E +++N Y
Sbjct: 730 GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQN-------YVN 782
Query: 258 LSNRCMELRKTCNHPLL 274
+ + LR+ C+HPLL
Sbjct: 783 ILLMLLRLRQACDHPLL 799
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 302 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDC 361
+ ++ G + ++FS TK+L++LE L + YRR+DGT S+ R+ A+ DFN+ +
Sbjct: 1117 VPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEV 1175
Query: 362 FIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM---EA 418
+ ++S++AA GLN+ +A V++ D NP E+QA+ RAHRIGQ R V V+ +
Sbjct: 1176 TVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDT 1235
Query: 419 VVDKISSHEKEDELRSGSTVDMEDE 443
V D+I + +++ + S EDE
Sbjct: 1236 VEDRILALQQKKRMMVASAFG-EDE 1259
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 116/317 (36%), Gaps = 87/317 (27%)
Query: 18 LIIVPNAVMVNWKSELHTWLPS---VSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEF 74
L++ P +VM W ELH + S +S + Y GS S+ LA K++V+VTT+
Sbjct: 668 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGS----SRTKDPHELA-KYDVVVTTFSI 722
Query: 75 IMYDRSK----------------------------------------------------L 82
+ + K L
Sbjct: 723 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 782
Query: 83 SKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPD 142
+K+ W +++DEAQ +K+ + +AR R RR L+GTP+QN D
Sbjct: 783 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 842
Query: 143 VFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRR-RVEDVE 201
+ + F P T V +L IL+ MLRR + ++
Sbjct: 843 PYSSYVLFCSTIKNPI---------------TRNPVKGYQKLQAILKTVMLRRTKGSLLD 887
Query: 202 G----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKT 257
G SLPPK + + + + Y +++ + E +++N Y
Sbjct: 888 GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQN-------YVN 940
Query: 258 LSNRCMELRKTCNHPLL 274
+ + LR+ C+HPLL
Sbjct: 941 ILLMLLRLRQACDHPLL 957
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 259 SNRCMELRKTCN-HPLLNYP----FFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLL 313
S C R T + L+ P F D+ K ++ S K+ L L L+ +G + +L
Sbjct: 827 SGLCPVCRNTVSKQELITAPTESRFQVDVEKNWVESS--KITALLEELEGLRSSGSKSIL 884
Query: 314 FSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGR 373
FS T LD+L+ L + R+DGT S + RE + +F S D + L+S++A G
Sbjct: 885 FSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEF-SEDGSILVLLMSLKAGGV 943
Query: 374 GLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKV 413
G+NL +A + DP NP EEQAV R HRIGQ +EVK+
Sbjct: 944 GINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKI 983
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 53/298 (17%)
Query: 15 GPHLIIVPNAVMVNWKSE--LHTWLPSVSCIFYVG-SKDYRSKLFSQEVLAMKFNVLVTT 71
G +LI+ P ++ WK+E +H S+S + G S+ +KL SQ +V++TT
Sbjct: 490 GGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQS------DVVITT 543
Query: 72 YEFIM--------YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGT 123
Y + D + + W I++DEA +K+ S ++ RR LTGT
Sbjct: 544 YGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGT 603
Query: 124 PLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHR 183
P+QN+ + + +N KPF+ EG + +
Sbjct: 604 PIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE-EGDERG--------------LKL 648
Query: 184 LHQILEPFMLRRR--VEDVEG----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDP 237
+ IL+P MLRR D EG LPP + V+ C++S + YD + ++ D
Sbjct: 649 VQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQ 708
Query: 238 EDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLL--------NYPFFSDLSKEFI 287
E+ K+ N Y ++ + LR+ C+HP L Y + LSK F+
Sbjct: 709 FVEQGKVLHN-------YASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFL 759
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 15 GPHLIIVPNAVMVNWKSEL--HTWLPSVSC-IFYVGSKDYRSK-LFSQEVLAMKFNVLVT 70
G LII P A++ WK EL H+ +VS ++Y G + + +K + S +V+ + VL +
Sbjct: 741 GGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTS 800
Query: 71 TYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXX 130
Y+ M + S +IDW I++DEA +K + A+ H R LTGTPLQN
Sbjct: 801 AYKQDMAN-SIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLE 859
Query: 131 XXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEP 190
+ + N W+SK QK P +N + L+ + IL P
Sbjct: 860 DLYSLLCFLHVEPWCNWA----WWSKLIQK--PYENGDPRGLKL---------IKAILRP 904
Query: 191 FMLRRRVE--DVEGS----LPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKI 244
MLRR E D EGS LPP V+ C+ S + Y + ++ D + K+
Sbjct: 905 LMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKV 964
Query: 245 QKNPNYQEKSYKTLSNRCMELRKTCNHPLL 274
N Y + + LR+ CNHP L
Sbjct: 965 LHN-------YANILELLLRLRQCCNHPFL 987
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 302 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDC 361
IK +G + ++FS T LD+LE L+ R + R DG + + RE + +FN
Sbjct: 1121 IKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKT 1180
Query: 362 FIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKV 413
I L+S++A G GLNL +A +V + DP NP EEQA+ R HRIGQKR V V
Sbjct: 1181 -ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFV 1231
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 65/423 (15%)
Query: 16 PHLIIVPNAVMVNWKSELHTWLP---------------SVSCIFYVGSKDYRSKLFSQEV 60
P LII P+++ ++W + +H WL S C F + S + + + V
Sbjct: 216 PVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGV 275
Query: 61 LAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKD----RDSVLARDLDRYRCHR 116
FN++ +Y+ + L +D+K +I DE+ +K+ R S + +
Sbjct: 276 ----FNIV--SYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKK--AQY 327
Query: 117 RLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEK 176
+LL+GTP + PDV+ N + + K G Q A +
Sbjct: 328 AILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKG-GFFGTYQGASNH------ 380
Query: 177 KVIIIHRLHQILEP-FMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRL 235
LH +++ M+RR +DV LP K R + + A D +K +L
Sbjct: 381 -----DELHNLMKATVMIRRLKKDVLTELPSK-----RRQQVFLDLAAKD-MKQINALFH 429
Query: 236 DPEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLW 295
+ + K KI+ E K+L K L+N ++D + + K L
Sbjct: 430 ELKVVKSKIKDC--ISEDDIKSL--------KFIEKNLIN-KIYTDSA---VAKIPAVLD 475
Query: 296 ILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFN 355
L+ ++ G + L+F+ +L+ L ++L+ +++ RIDG+T R++ + DF
Sbjct: 476 YLENVI----EAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQ 531
Query: 356 SPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIY 415
D + +LSIRAAG G+ L +A TV+ + P + QA RAHRIGQ V + Y
Sbjct: 532 DKD-EIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHY 590
Query: 416 MEA 418
+ A
Sbjct: 591 LLA 593
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 312 LLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPD-SDCFIFLLSIRA 370
++FS K+L +LE L+ R+DG +++ R I +F +P+ + + L S++A
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 371 AGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA 418
+G G+NL +A V ++DP NP EEQA+ R HRIGQK+EVK+I M A
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIA 817
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 47/266 (17%)
Query: 18 LIIVPNAVMVNWKSEL--HTWLPSVSCIFYVGSK--DYRSKLFSQEVLAMKFNVLVTTYE 73
LI+ P +V+ W ++L HT + Y G + D ++L MK+++++TTY
Sbjct: 342 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNEL-------MKYDIVLTTYG 394
Query: 74 FIM----YDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDX 129
+ ++ S + K++W II+DEA +K+ ++ +R + + + RR +TGTP+QN
Sbjct: 395 TLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGS 454
Query: 130 XXXXXXXXXXXPDVFDNKKAFNDWFSKPF---QKEGPSQNAEDDWLETEKKVIIIHRLHQ 186
+ F K + +P K+G + RL
Sbjct: 455 FDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKG------------------LSRLQV 496
Query: 187 ILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQK 246
++ LRR E LPPK ++S + +YD ++ + K +Q
Sbjct: 497 LMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEG---------EAKGVVQN 547
Query: 247 --NPNYQEKSYKTLSNRCMELRKTCN 270
N ++Y T+ + + LR+ C+
Sbjct: 548 LINNGSLMRNYSTVLSIILRLRQLCD 573
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 310 RVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIR 369
+ ++FS T +LD++E L + +RR+DGT SL R+ A+ +F S D D + ++S++
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEF-SNDPDVKVMIMSLK 886
Query: 370 AAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM---EAVVDKISSH 426
A GLN+ +A V++ D NP E+QA+ RAHRIGQ R V V + V D+I +
Sbjct: 887 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL 946
Query: 427 EKE 429
++E
Sbjct: 947 QEE 949
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 27/209 (12%)
Query: 78 DRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXX 137
D L+K+ W +++DEAQ +K+ + +AR R RR L+GTP+QN
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 521
Query: 138 XXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRR-R 196
D + K+F P + L+ KK L +L MLRR +
Sbjct: 522 FLKYDPYAVYKSFCHQIKGPISRNS---------LQGYKK------LQAVLRAIMLRRTK 566
Query: 197 VEDVEG----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQE 252
++G +LPPK + + S + + Y ++S + + +N
Sbjct: 567 GTLLDGQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQN----- 621
Query: 253 KSYKTLSNRCMELRKTCNHPLLNYPFFSD 281
Y + + LR+ C+HP L + SD
Sbjct: 622 --YANILLMLLRLRQACDHPQLVKRYNSD 648
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 192/465 (41%), Gaps = 79/465 (16%)
Query: 3 LIAYLMEFKGNYGPH---LIIVPNAVMVNWKSELHTW----LPSVSCIFY---VGSKDYR 52
LI++L F P L+++P ++ +WK E W +P + FY S+ +
Sbjct: 302 LISFLQSFMA-MDPQARPLVVLPKGIIESWKREFTLWEVEKIPLLD--FYSVKAESRKQQ 358
Query: 53 SKLFSQEVLAMKFNVLVTTYE----FIMYDRSKLSKIDWKYI--------IIDEAQRMKD 100
K+ Q + + ++L Y+ I D + + D K I I+DE ++
Sbjct: 359 LKVLGQWI--KERSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRN 416
Query: 101 RDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFD---NKKAFNDWFSKP 157
+++ + L R + R+++LTGT QN+ P ++ + SK
Sbjct: 417 KETYMLSSLARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKA 476
Query: 158 FQKEGPSQNAEDDWLE----------------TEKKVIIIHRLHQILEPFMLRRRVEDVE 201
G N +E K +I L ++ +L D
Sbjct: 477 EIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKASLIKDLREMTRN-ILHYHKADFS 535
Query: 202 GSLPPKVSIVLRCKMSAIQ---------SAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQE 252
G LP + +S+IQ ++ + +L + P+ K +++NP+ E
Sbjct: 536 GLLPGLSEFTVMLNLSSIQRDEVKGLRKMELFKQISLGAALYIHPK-LKSFLEENPSNGE 594
Query: 253 KSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVL 312
K + + M+L K + K+ V+ K+ +L + TG ++L
Sbjct: 595 KGFSDNNTTVMKLDK--------------MLKKINVRDGVKMKFFLNLLALCESTGEKLL 640
Query: 313 LFSTMTKLLDILEEYLQ----WR--RLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLL 366
+FS + LE + WR + ++ I G +S E RE ++ FN+ + +F
Sbjct: 641 VFSQYIVPIKTLERLMSSMKGWRLGKEMFT-ITGDSSNEQREWSMERFNN-SLEAKVFFG 698
Query: 367 SIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV 411
SI+A G G++L A V+I D NP +QAVARA+R GQKR+V
Sbjct: 699 SIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKV 743
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 310 RVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIR 369
+ ++FS T +LD++E + + +RR+DGT SL R+ A+ +F S D + L+S++
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEF-SKKPDVKVMLMSLK 952
Query: 370 AAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM---EAVVDKISSH 426
A GLN+ +A V++ D NP E+QA+ RAHRIGQ R V V + + V D+I
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
Query: 427 EKE 429
++E
Sbjct: 1013 QEE 1015
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 78 DRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXX 137
D L K+ W I++DEAQ +K+ + +AR R RR L+GTP+QN
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 138 XXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRR-R 196
D + K+F P S+N+ + +L +L MLRR +
Sbjct: 593 FLRYDPYAVYKSFYSTIKVPI-----SRNSCQGY----------KKLQAVLRAIMLRRTK 637
Query: 197 VEDVEG----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQE 252
++G +LPPKV + + S + + Y +++ + + + +N
Sbjct: 638 GTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQN----- 692
Query: 253 KSYKTLSNRCMELRKTCNHPLLNYPFFSD 281
Y + + LR+ C+HP L + SD
Sbjct: 693 --YANILLLLLRLRQACDHPQLVKRYNSD 719
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 298 DRILIKLQRTGH-RVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNS 356
+ I ++R G + ++FS T LD++ L + ++ G+ ++ R++AI F
Sbjct: 669 EEIRFMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKE 728
Query: 357 PDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 416
D DC +FL+S++A G LNL A V + DP NP E QA R HRIGQ + ++V+
Sbjct: 729 -DPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRF 787
Query: 417 ---EAVVDKISSHEKEDELRSGSTVDMEDELVGK 447
V ++I +K+ EL TV E +GK
Sbjct: 788 IIENTVEERILRLQKKKELVFEGTVGGSQEAIGK 821
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 182/445 (40%), Gaps = 69/445 (15%)
Query: 15 GPHLIIVPNAVMVNWKSELHTWLPS-----VSCIFYVGSKDYRSKLFSQEVLAMKFNVLV 69
G L++ P + W EL WLPS V +F G +D + L V+V
Sbjct: 247 GSILVVCPAVLRFTWAEELERWLPSCLPSDVHLVF--GHQD------NPAYLPRWPKVVV 298
Query: 70 TTYEFIMYDRSKLSKIDWKYIIIDEAQRM-----KDRDSVLARDLDRY-RCHRRLLLTGT 123
+Y+ + + R+ + + +W +I+DE+ + K + LD + +LL+GT
Sbjct: 299 ISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGT 358
Query: 124 PLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHR 183
P + P + K F+K + + G + + + K +
Sbjct: 359 PSVSRPFDIFHQINMLWPGLLGKDKY---EFAKTYCEVGLVRGIQGKIFQDFSKGTRLLE 415
Query: 184 LHQIL-EPFMLRRRVEDVEGSLPPK----VSIVLRCKMSAIQSAIYDWVKSTGSLRLDPE 238
L+ +L + M+RR + + LPPK V+I+L+ A+ AI E
Sbjct: 416 LNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVS------------E 463
Query: 239 DEKRKIQKNPNYQEKSYKTLSNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKL---- 294
+K+K EKS++ N R + +N + + + CGKL
Sbjct: 464 AKKQKDGAIAEVTEKSHEPDQNA----RGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQ 519
Query: 295 -----------WI-LDRILIKLQ---------RTGHRVLLFSTMTKLLDILEEYLQWRRL 333
W+ L +L L R+ ++++F+ K+LD ++E++ + +
Sbjct: 520 LGIAKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGI 579
Query: 334 VYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPK 393
+ RIDGTT DR+ A+ F S+ I ++ + A G GL+ +A VV + P
Sbjct: 580 GFVRIDGTTLPRDRQLAVQSFQF-SSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPS 638
Query: 394 NEEQAVARAHRIGQKREVKVIYMEA 418
QA RAHR GQ V V A
Sbjct: 639 LLLQAEDRAHRRGQTSAVNVYIFCA 663
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 44/348 (12%)
Query: 90 IIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKA 149
+++DEA +++ S + + L + +R+LL+GTP QN+ P + +
Sbjct: 1008 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTS 1067
Query: 150 FNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVS 209
K G L E I L ++ PF+ + ++ SLP
Sbjct: 1068 TLKKSGMTVTKRGKKN------LGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRE 1121
Query: 210 IVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYK--------TLSNR 261
V+ +Q + + ++ T + +K N E +K +L +R
Sbjct: 1122 CVVVLNPPELQRRVLESIEVTHN------------RKTKNVFETEHKLSLVSVHPSLVSR 1169
Query: 262 CMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKL----QRTGHRVLLFSTM 317
C K ++ + L K V+ + R L++ + +VL+FS
Sbjct: 1170 CKISEK--ERLSIDEALLAQLKK---VRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQY 1224
Query: 318 TKLLDILEEYL----QW---RRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRA 370
L ++ ++L +W ++Y + G + R++ I +FN P S +FL S +A
Sbjct: 1225 IDPLKLIMKHLVSRFKWNPGEEVLY--MHGKLEQKQRQTLINEFNDPKSKAKVFLASTKA 1282
Query: 371 AGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA 418
G++L A V++ D NP E QA++RA+RIGQKR V ++ A
Sbjct: 1283 CSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVA 1330
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 160/395 (40%), Gaps = 69/395 (17%)
Query: 90 IIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKA 149
+++DE +++ S++ + L R +R+ L+GT QN+ P D +
Sbjct: 744 LVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTISS 803
Query: 150 FNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVS 209
SK Q EG ++ + K +I H +H + E +L+ SLP
Sbjct: 804 RIHELSKCSQ-EGEHGRVNEENRIVDLKAMIAHFVH-VHEGTILQE-------SLP---- 850
Query: 210 IVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKTLSNRCMELRKTC 269
+ D V + L+P +++KI + + +++ +L
Sbjct: 851 ------------GLRDCV-----VVLNPPFQQKKILDRIDTSQNTFEFEH----KLSAVS 889
Query: 270 NHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLF------STMTKLLDI 323
HP L Y + KE +V L L R+ +K + L T+ + + +
Sbjct: 890 VHPSL-YLCCNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLV 948
Query: 324 LEEYLQWRRLVYRRI---------------DGTTSLEDRESAIVDFNSPDSDCFIFLLSI 368
+Y+ +L+ ++ G DR+ I +FN PDS + L S
Sbjct: 949 YSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLAST 1008
Query: 369 RAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVD------- 421
+A G++L A VVI D NP E QA++RA RIGQKR V IY V D
Sbjct: 1009 KACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAV-FIYHLMVKDTSEWNKY 1067
Query: 422 -KISSHEKEDELRSGSTVD----MEDELVGKDRYI 451
K S + EL ST + + +E+V KDR +
Sbjct: 1068 CKQSEKHRISELVFSSTNEKDKPINNEVVSKDRIL 1102
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ-----------WRRLV-YRRID 339
GK+ +L IL G + L+FS LD++E YL W++ + RID
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 340 GTTSLEDRESAIVDFNSPDSD-CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA 398
G T +R+ + FN PD+ L+S RA G+NL +A+ V+I D NP + QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 399 VARAHRIGQKREV 411
+ RA R GQK+ V
Sbjct: 1235 IFRAWRYGQKKPV 1247
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 18 LIIVPNAVMVNWKSELHTWLPSVSC---IFYVG--SKDYRSKLFSQ-----EVLAMKFNV 67
LI+ P V+ NW+SE W+PS IF +G S++ R L ++ V M +
Sbjct: 783 LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-- 840
Query: 68 LVTTYEFIMYDR-----------SKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHR 116
T + + R + ++ DEA +K+ + + L + +C R
Sbjct: 841 --TNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQR 898
Query: 117 RLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQK-EGPSQNAEDDWLETE 175
R+ LTG+PLQN+ + F + F P + + + AED + +
Sbjct: 899 RIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQ 958
Query: 176 KKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIY 224
+ H L++ L+ F+ R + V+ LPPK V+ K+S +Q +Y
Sbjct: 959 RS----HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ-----------WRRLV-YRRID 339
GK+ +L IL G + L+FS LD++E YL W++ + RID
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 340 GTTSLEDRESAIVDFNSPDSD-CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA 398
G T +R+ + FN PD+ L+S RA G+NL +A+ V+I D NP + QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 399 VARAHRIGQKREV 411
+ RA R GQK+ V
Sbjct: 1235 IFRAWRYGQKKPV 1247
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 18 LIIVPNAVMVNWKSELHTWLPSVSC---IFYVG--SKDYRSKLFSQ-----EVLAMKFNV 67
LI+ P V+ NW+SE W+PS IF +G S++ R L ++ V M +
Sbjct: 783 LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-- 840
Query: 68 LVTTYEFIMYDR-----------SKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHR 116
T + + R + ++ DEA +K+ + + L + +C R
Sbjct: 841 --TNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQR 898
Query: 117 RLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQK-EGPSQNAEDDWLETE 175
R+ LTG+PLQN+ + F + F P + + + AED + +
Sbjct: 899 RIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQ 958
Query: 176 KKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIY 224
+ H L++ L+ F+ R + V+ LPPK V+ K+S +Q +Y
Sbjct: 959 RS----HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ-----------WRRLV-YRRID 339
GK+ +L IL G + L+FS LD++E YL W++ + RID
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 340 GTTSLEDRESAIVDFNSPDSD-CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA 398
G T +R+ + FN PD+ L+S RA G+NL +A+ V+I D NP + QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 399 VARAHRIGQKREV 411
+ RA R GQK+ V
Sbjct: 1235 IFRAWRYGQKKPV 1247
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 18 LIIVPNAVMVNWKSELHTWLPSVSC---IFYVG--SKDYRSKLFSQ-----EVLAMKFNV 67
LI+ P V+ NW+SE W+PS IF +G S++ R L ++ V M +
Sbjct: 783 LIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGY-- 840
Query: 68 LVTTYEFIMYDR-----------SKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHR 116
T + + R + ++ DEA +K+ + + L + +C R
Sbjct: 841 --TNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQR 898
Query: 117 RLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQK-EGPSQNAEDDWLETE 175
R+ LTG+PLQN+ + F + F P + + + AED + +
Sbjct: 899 RIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQ 958
Query: 176 KKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIY 224
+ H L++ L+ F+ R + V+ LPPK V+ K+S +Q +Y
Sbjct: 959 RS----HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 292 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQ-----------WRRLV-YRRID 339
GK+ +L IL G + L+FS LD++E YL W++ + RID
Sbjct: 1094 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1153
Query: 340 GTTSLEDRESAIVDFNSPDSD-CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQA 398
G T +R+ + FN PD+ L+S RA G+NL +A+ V+I D NP + QA
Sbjct: 1154 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1213
Query: 399 VARAHRIGQKREV 411
+ RA R GQK+ V
Sbjct: 1214 IFRAWRYGQKKPV 1226
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 18 LIIVPNAVMVNWKSELHTWLPSVSCIFYVGSKDYRSKLFSQEVLAMKFNVL--VTTYEFI 75
LI+ P V+ NW+SE W+PS EV ++ +L V+ Y+F
Sbjct: 783 LIVTPVNVLHNWRSEFEKWMPS-------------------EVKPLRIFMLGDVSRYKF- 822
Query: 76 MYDRSKLSKIDWK--------------YIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLT 121
Y+R+ D ++ DEA +K+ + + L + +C RR+ LT
Sbjct: 823 FYERNFWGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALT 882
Query: 122 GTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQK-EGPSQNAEDDWLETEKKVII 180
G+PLQN+ + F + F P + + + AED + ++
Sbjct: 883 GSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRS--- 939
Query: 181 IHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAIQSAIY 224
H L++ L+ F+ R + V+ LPPK V+ K+S +Q +Y
Sbjct: 940 -HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 982
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 265 LRKTCNHP-LLNYPFFSDLSK--------EFIVKSCGKLWILDRILIKLQRTGHRVLLFS 315
+RKTC+HP +++ L+K + +K+ GKL +LD++L +++ G + ++F
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 316 TMTK------LLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIR 369
T+ L +ILE+++ +R + + + SAI +FN +S C + LL R
Sbjct: 583 QATQTPEGLLLGNILEDFV-GQRFGPKSYEHGIYSSKKNSAINNFNK-ESQCCVLLLETR 640
Query: 370 AAGRGLNLQSADTVVIYDPDPNPKNEEQAVAR 401
A + + L AD +++ NP ++ + V +
Sbjct: 641 ACSQTIKLLRADAFILFGSSLNPSHDVKHVEK 672
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 265 LRKTCNHP-LLNYPFFSDLSK--------EFIVKSCGKLWILDRILIKLQRTGHRVLLFS 315
+RKTC+HP +++ L+K + +K+ GKL +LD++L +++ G + ++F
Sbjct: 523 VRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFY 582
Query: 316 TMTK------LLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIR 369
T+ L +ILE+++ +R + + + SAI +FN +S C + LL R
Sbjct: 583 QATQTPEGLLLGNILEDFV-GQRFGPKSYEHGIYSSKKNSAINNFNK-ESQCCVLLLETR 640
Query: 370 AAGRGLNLQSADTVVIYDPDPNPKNEEQAVAR 401
A + + L AD +++ NP ++ + V +
Sbjct: 641 ACSQTIKLLRADAFILFGSSLNPSHDVKHVEK 672
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 116/317 (36%), Gaps = 87/317 (27%)
Query: 18 LIIVPNAVMVNWKSELHTWLPS---VSCIFYVGSKDYRSKLFSQEVLAMKFNVLVTTYEF 74
L++ P +VM W ELH + S +S + Y GS S+ LA K++V+VTT+
Sbjct: 675 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGS----SRTKDPHELA-KYDVVVTTFSI 729
Query: 75 IMYDRSK----------------------------------------------------L 82
+ + K L
Sbjct: 730 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 789
Query: 83 SKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPD 142
+K+ W +++DEAQ +K+ + +AR R RR L+GTP+QN D
Sbjct: 790 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 849
Query: 143 VFDNKKAFNDWFSKPFQKEGPSQNAEDDWLETEKKVIIIHRLHQILEPFMLRR-RVEDVE 201
+ + F P T V +L IL+ MLRR + ++
Sbjct: 850 PYSSYVLFCSTIKNPI---------------TRNPVKGYQKLQAILKTVMLRRTKGSLLD 894
Query: 202 G----SLPPKVSIVLRCKMSAIQSAIYDWVKSTGSLRLDPEDEKRKIQKNPNYQEKSYKT 257
G SLPPK + + + + Y +++ + E +++N Y
Sbjct: 895 GKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQN-------YVN 947
Query: 258 LSNRCMELRKTCNHPLL 274
+ + LR+ C+HPLL
Sbjct: 948 ILLMLLRLRQACDHPLL 964
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 307 TGHRVLLFSTMTKLLDILEEYLQ----WR--RLVYRRIDGTTSLEDRESAIVDFNS-PDS 359
G ++L+FS L LE W+ + V+ + G TS E RE ++ FNS PD+
Sbjct: 709 AGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFV-LTGNTSSEQREWSMETFNSSPDA 767
Query: 360 DCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAV 419
IF SI+A G G++L A ++I D NP QA+ RA R GQK+ V + A
Sbjct: 768 K--IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAG 825
Query: 420 VDKISSHEKED 430
SS E+ED
Sbjct: 826 ----SSPEEED 832
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 294 LWILDRILIKLQRTGHRVLLF----STMTKLLDILEEYLQWRR-LVYRRIDGTTSLEDRE 348
+++L+ + ++R ++L+F + + L++ E +W+R + G L +R
Sbjct: 1060 MFVLNLVFRVVKR--EKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERG 1117
Query: 349 SAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQK 408
I F P + L SI A G++L +A V++ D + NP +QA+ARA R GQ+
Sbjct: 1118 RVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQ 1177
Query: 409 REVKV 413
+ V V
Sbjct: 1178 KVVYV 1182
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 299 RIL-IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSP 357
RIL IK +VL+FS+ +LD+LE + R+ G ++AI F
Sbjct: 1439 RILWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGG---RKSQTAISKFKGS 1495
Query: 358 DSDCF-------------IFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHR 404
+ + + LL ++ GLNL A V++ +P NP E QAV R HR
Sbjct: 1496 EKETQKTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHR 1555
Query: 405 IGQKREVKV 413
IGQ++ V
Sbjct: 1556 IGQEKPTLV 1564
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 110/297 (37%), Gaps = 54/297 (18%)
Query: 15 GPHLIIVPNAVMVNWKSEL--HTWLPSVSCIFYVGSKDYR---------SKLFSQEVLAM 63
G LI+ P ++ W SE+ HT L S+ Y G ++ ++L + +++
Sbjct: 500 GATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLT 559
Query: 64 KFNVLV--TTYEFIMYDRSK---------------LSKIDWKYIIIDEAQRMKDRDSVLA 106
++VL T++F +D + L++I W I +DEAQ ++ +
Sbjct: 560 TYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAAAAT 619
Query: 107 RDLDRYRCHRRLLLTGTPLQNDXXXXXXXXXXXXPDVFDNKKAFNDWFSKPFQKEGPSQN 166
R R +TGTP+Q + FD + + + P+++
Sbjct: 620 EMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYER------ 673
Query: 167 AEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV--EGSLPPKVSIVLRCKMSAIQSAIY 224
+ + H+ + M R V E LPP+ V K SAI+ Y
Sbjct: 674 ---------RDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFY 724
Query: 225 DWVKST--GSLRLDPEDEKRKIQK-------NPNYQEKSYKTLSNRCMELRKTCNHP 272
T R E KR I K NP L N ++LR+ C HP
Sbjct: 725 SRQHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHP 781
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 294 LWILDRILIKLQRTGHRVLLF----STMTKLLDILEEYLQWRR-LVYRRIDGTTSLEDRE 348
+++L+ I ++R ++L+F + + ++ E +W+R + G L +R
Sbjct: 1066 MFVLNLIFRVVKR--EKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERG 1123
Query: 349 SAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQK 408
I F P + + L SI A G++L +A V++ D + NP +QA+ARA R GQ+
Sbjct: 1124 RVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQ 1183
Query: 409 REVKVIYMEAVVDK 422
KV+Y+ ++ +
Sbjct: 1184 ---KVVYVYQLLSR 1194
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 310 RVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIR 369
+VL+FS + + ++E+ L + + ++ ++ A+ F + D+DC L+
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQN-DADCMALLMDGS 1253
Query: 370 AAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKV--IYMEAVVDK----- 422
A GL+L V + +P + EEQ ++RAHR+G KR + V + M +++
Sbjct: 1254 GA-LGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRF 1312
Query: 423 ISSHEKEDELRSGSTVDMEDE 443
+ EK D L SG ++ + E
Sbjct: 1313 LEDAEKSDRLLSGDYIEAKQE 1333