Miyakogusa Predicted Gene
- Lj1g3v2671470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2671470.1 Non Chatacterized Hit- tr|I3T9K2|I3T9K2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.26,0,HAD-like,HAD-like domain; seg,NULL,CUFF.29411.1
(270 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45990.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 404 e-113
AT2G45990.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 404 e-113
AT2G45990.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 385 e-107
AT2G45990.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 311 4e-85
>AT2G45990.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 312 Blast hits to 312 proteins in 90
species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114
(source: NCBI BLink). | chr2:18919402-18921043 FORWARD
LENGTH=268
Length = 268
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/268 (72%), Positives = 223/268 (83%)
Query: 3 MGHLYALDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMITVRPVVET 62
MG LYALDFDGV+CDSCGE+++SA+KAAK+RWP LF VDSA E+WIV+QM VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 63 GYXXXXXXXXXXXXXXPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENREDLIELFG 122
GY PSIRKSSVA+GLTV+ ILE+W K KPVIME W+E+R+ L++LFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 123 KVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELAGVTLPP 182
KVRDDW+ KD WIGANR YPG +DAL+FASS++YIVTTKQGRFA+ALLRE+AGV +P
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 183 ERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLVDWGF 242
ERIYGLG+GPKVEVLK LQ PEHQGLTLHFVEDRLATLKNVIKEPELD W+LYL WG+
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 243 NTQKEREEAAANPRIQVLGLSDFSNKLK 270
NT+KER EAA PRIQV+ LS FSNKLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
>AT2G45990.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 312 Blast hits
to 312 proteins in 90 species: Archae - 0; Bacteria -
131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0;
Other Eukaryotes - 114 (source: NCBI BLink). |
chr2:18919402-18921043 FORWARD LENGTH=268
Length = 268
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/268 (72%), Positives = 223/268 (83%)
Query: 3 MGHLYALDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMITVRPVVET 62
MG LYALDFDGV+CDSCGE+++SA+KAAK+RWP LF VDSA E+WIV+QM VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 63 GYXXXXXXXXXXXXXXPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENREDLIELFG 122
GY PSIRKSSVA+GLTV+ ILE+W K KPVIME W+E+R+ L++LFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 123 KVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELAGVTLPP 182
KVRDDW+ KD WIGANR YPG +DAL+FASS++YIVTTKQGRFA+ALLRE+AGV +P
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 183 ERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLVDWGF 242
ERIYGLG+GPKVEVLK LQ PEHQGLTLHFVEDRLATLKNVIKEPELD W+LYL WG+
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 243 NTQKEREEAAANPRIQVLGLSDFSNKLK 270
NT+KER EAA PRIQV+ LS FSNKLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
>AT2G45990.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr2:18919402-18921043 FORWARD LENGTH=263
Length = 263
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/268 (70%), Positives = 217/268 (80%), Gaps = 5/268 (1%)
Query: 3 MGHLYALDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMITVRPVVET 62
MG LYALDFDGV+CDSCGE+++SA+KAAK+RWP LF VDSA E+WIV+QM VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 63 GYXXXXXXXXXXXXXXPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENREDLIELFG 122
GY PSIRKSSVA+GLTV+ ILE+W K KPVIME W+E+R+ L++LFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 123 KVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELAGVTLPP 182
KVRDDW+ KD WIGANR YPG +DAL+FASS++YIVTTKQGRFA+ALLRE+AGV +P
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 183 ERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLVDWGF 242
ERIYGLG+GPKVEVLK LQ PEHQGLTL LATLKNVIKEPELD W+LYL WG+
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLQ-----LATLKNVIKEPELDKWSLYLGTWGY 235
Query: 243 NTQKEREEAAANPRIQVLGLSDFSNKLK 270
NT+KER EAA PRIQV+ LS FSNKLK
Sbjct: 236 NTEKERAEAAGIPRIQVIELSTFSNKLK 263
>AT2G45990.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr2:18919402-18920690 FORWARD LENGTH=210
Length = 210
Score = 311 bits (796), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%)
Query: 3 MGHLYALDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMITVRPVVET 62
MG LYALDFDGV+CDSCGE+++SA+KAAK+RWP LF VDSA E+WIV+QM VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 63 GYXXXXXXXXXXXXXXPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENREDLIELFG 122
GY PSIRKSSVA+GLTV+ ILE+W K KPVIME W+E+R+ L++LFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 123 KVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELAGVTLPP 182
KVRDDW+ KD WIGANR YPG +DAL+FASS++YIVTTKQGRFA+ALLRE+AGV +P
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 183 ERIYGLGTGPKVEVLKKLQKMPEHQGLTLH 212
ERIYGLG+GPKVEVLK LQ PEHQGLTL
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLQ 210