Miyakogusa Predicted Gene
- Lj1g3v2671450.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2671450.2 Non Chatacterized Hit- tr|I3SD61|I3SD61_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.25,0,HAD-like,HAD-like domain; seg,NULL; no
description,HAD-like domain,CUFF.29413.2
(268 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45990.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 445 e-125
AT2G45990.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 445 e-125
AT2G45990.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 426 e-119
AT2G45990.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 347 4e-96
>AT2G45990.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 312 Blast hits to 312 proteins in 90
species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114
(source: NCBI BLink). | chr2:18919402-18921043 FORWARD
LENGTH=268
Length = 268
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/268 (79%), Positives = 236/268 (88%)
Query: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
MG+LYALDFDGV+CDSCGESSLSA+KAAKVRWP LF+GV+SA ++WIVDQMH VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENXXXXXXXXETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
GYEN ET+ PSIRKSSVAEGLTVDGILE W+K KPVIME W E+RDAL+DLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
KVRD+W+ ++ TWIGANR YPGVSDALKFASS++YIVTTKQ RFA+A+LRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
ERIYGLGSGPKVEVLK LQ KPEHQGLTLHFVEDRLATLKNVIKEPELD+W+LYLG WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 241 NTRKEKEEAAAISRIQVLELSDFSKKLK 268
NT KE+ EAA I RIQV+ELS FS KLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
>AT2G45990.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 312 Blast hits
to 312 proteins in 90 species: Archae - 0; Bacteria -
131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0;
Other Eukaryotes - 114 (source: NCBI BLink). |
chr2:18919402-18921043 FORWARD LENGTH=268
Length = 268
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/268 (79%), Positives = 236/268 (88%)
Query: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
MG+LYALDFDGV+CDSCGESSLSA+KAAKVRWP LF+GV+SA ++WIVDQMH VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENXXXXXXXXETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
GYEN ET+ PSIRKSSVAEGLTVDGILE W+K KPVIME W E+RDAL+DLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
KVRD+W+ ++ TWIGANR YPGVSDALKFASS++YIVTTKQ RFA+A+LRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
ERIYGLGSGPKVEVLK LQ KPEHQGLTLHFVEDRLATLKNVIKEPELD+W+LYLG WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 241 NTRKEKEEAAAISRIQVLELSDFSKKLK 268
NT KE+ EAA I RIQV+ELS FS KLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
>AT2G45990.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr2:18919402-18921043 FORWARD LENGTH=263
Length = 263
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 230/268 (85%), Gaps = 5/268 (1%)
Query: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
MG+LYALDFDGV+CDSCGESSLSA+KAAKVRWP LF+GV+SA ++WIVDQMH VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENXXXXXXXXETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
GYEN ET+ PSIRKSSVAEGLTVDGILE W+K KPVIME W E+RDAL+DLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
KVRD+W+ ++ TWIGANR YPGVSDALKFASS++YIVTTKQ RFA+A+LRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
ERIYGLGSGPKVEVLK LQ KPEHQGLTL LATLKNVIKEPELD+W+LYLG WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLQ-----LATLKNVIKEPELDKWSLYLGTWGY 235
Query: 241 NTRKEKEEAAAISRIQVLELSDFSKKLK 268
NT KE+ EAA I RIQV+ELS FS KLK
Sbjct: 236 NTEKERAEAAGIPRIQVIELSTFSNKLK 263
>AT2G45990.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink). |
chr2:18919402-18920690 FORWARD LENGTH=210
Length = 210
Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 164/210 (78%), Positives = 184/210 (87%)
Query: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
MG+LYALDFDGV+CDSCGESSLSA+KAAKVRWP LF+GV+SA ++WIVDQMH VRPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENXXXXXXXXETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
GYEN ET+ PSIRKSSVAEGLTVDGILE W+K KPVIME W E+RDAL+DLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
KVRD+W+ ++ TWIGANR YPGVSDALKFASS++YIVTTKQ RFA+A+LRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGLTLH 210
ERIYGLGSGPKVEVLK LQ KPEHQGLTL
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLQ 210