Miyakogusa Predicted Gene
- Lj1g3v2671420.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2671420.4 tr|C0Z2X2|C0Z2X2_ARATH AT2G45950 protein
OS=Arabidopsis thaliana GN=AT2G45950 PE=2 SV=1,75,4e-17,no
description,BTB/POZ fold; Found in Skp1 protein family,SKP1 component;
Skp1,SKP1 component, dimer,CUFF.29409.4
(159 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45950.1 | Symbols: ASK20, SK20 | SKP1-like 20 | chr2:1890461... 246 4e-66
AT2G45950.2 | Symbols: ASK20, SK20 | SKP1-like 20 | chr2:1890467... 246 6e-66
AT3G61415.2 | Symbols: ASK21, SK21 | SKP1-like 21 | chr3:2272305... 246 7e-66
AT3G61415.1 | Symbols: ASK21, SK21 | SKP1-like 21 | chr3:2272296... 246 7e-66
AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 | chr3:7697089-76... 94 3e-20
AT2G25700.1 | Symbols: ASK3, SK3 | SKP1-like 3 | chr2:10948914-1... 77 5e-15
AT1G20140.1 | Symbols: ASK4, SK4 | SKP1-like 4 | chr1:6986430-69... 76 7e-15
AT5G42190.1 | Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF com... 75 3e-14
AT2G03170.1 | Symbols: ASK14, SK14 | SKP1-like 14 | chr2:961322-... 74 5e-14
AT1G75950.1 | Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase... 74 5e-14
AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 | chr3:7699777... 74 6e-14
AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 | chr3:7693481-76... 72 2e-13
AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 | chr4:1637900... 69 1e-12
AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 | chr4:1648002... 68 2e-12
AT3G60020.1 | Symbols: ASK5, SK5 | SKP1-like 5 | chr3:22164844-2... 62 1e-10
AT2G20160.1 | Symbols: MEO, ASK17 | E3 ubiquitin ligase SCF comp... 61 3e-10
AT1G10230.1 | Symbols: ASK18, SK18 | SKP1-like 18 | chr1:3355600... 61 4e-10
AT3G25650.1 | Symbols: ASK15, SK15 | SKP1-like 15 | chr3:9335876... 59 2e-09
AT3G60010.1 | Symbols: ASK13, SK13 | SKP1-like 13 | chr3:2216309... 57 7e-09
AT2G03190.1 | Symbols: ASK16, SK16 | SKP1-like 16 | chr2:964232-... 52 2e-07
AT3G21840.1 | Symbols: ASK7, SK7 | SKP1-like 7 | chr3:7695490-76... 52 2e-07
AT2G03160.1 | Symbols: ASK19, SK19 | SKP1-like 19 | chr2:959645-... 50 8e-07
>AT2G45950.1 | Symbols: ASK20, SK20 | SKP1-like 20 |
chr2:18904611-18906967 REVERSE LENGTH=342
Length = 342
Score = 246 bits (629), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 134/159 (84%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E D V+KPE +K Y+WLQT+DGSIQQVE EVA CP+ICQE+I KG GSSKN AISL
Sbjct: 1 MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ V+PAM SLILDYCRFHQ GRSNKE+K+YDE+FI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLK 159
>AT2G45950.2 | Symbols: ASK20, SK20 | SKP1-like 20 |
chr2:18904673-18906967 REVERSE LENGTH=352
Length = 352
Score = 246 bits (627), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 134/159 (84%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E D V+KPE +K Y+WLQT+DGSIQQVE EVA CP+ICQE+I KG GSSKN AISL
Sbjct: 1 MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ V+PAM SLILDYCRFHQ GRSNKE+K+YDE+FI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLK 159
>AT3G61415.2 | Symbols: ASK21, SK21 | SKP1-like 21 |
chr3:22723052-22725577 REVERSE LENGTH=349
Length = 349
Score = 246 bits (627), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 134/159 (84%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E + +IKPEM+K Y+WL+T+DGSIQQVE EVA CP+ICQE+I KG GSSKN AISL
Sbjct: 1 MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ V+PAMLSLI DYCRFHQ GRSNKE+K YDEKFI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159
>AT3G61415.1 | Symbols: ASK21, SK21 | SKP1-like 21 |
chr3:22722962-22725577 REVERSE LENGTH=351
Length = 351
Score = 246 bits (627), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 134/159 (84%)
Query: 1 MAEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISL 60
M+E + +IKPEM+K Y+WL+T+DGSIQQVE EVA CP+ICQE+I KG GSSKN AISL
Sbjct: 1 MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60
Query: 61 PQEVSPAMLSLILDYCRFHQRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLV 120
PQ V+PAMLSLI DYCRFHQ GRSNKE+K YDEKFI+ DT +L L AADSLQLK LV
Sbjct: 61 PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLEPFK 159
DLTS A+AR++EGK+PE IRE+FHLPDDLTEEEKLEP K
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLK 159
>AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 |
chr3:7697089-7697550 REVERSE LENGTH=153
Length = 153
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE E A C +I I H + I LP V+ +L+++++YC H
Sbjct: 8 LKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLPN-VTGKILAMVIEYCNKH 63
Query: 80 QRQGR---SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSP 136
S+ + K +D++F++KDT+ +F L+KAA+ L +KSL DL +A +++G +P
Sbjct: 64 HVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTP 123
Query: 137 EVIREMFHLPDDLTEEEK 154
E IRE F++ +DLT EE+
Sbjct: 124 EQIREFFNIENDLTPEEE 141
>AT2G25700.1 | Symbols: ASK3, SK3 | SKP1-like 3 |
chr2:10948914-10949551 REVERSE LENGTH=163
Length = 163
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 15 KPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILD 74
K + L++SDG +VE VA + Q I H + I LP V+ A+L+ +++
Sbjct: 5 KKMIILKSSDGESFEVEEAVA----VESQTIKHMIEDDCVDNGIPLPN-VTGAILAKVIE 59
Query: 75 YCRFHQRQG------------RSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDL 122
YC+ H N E K++D F+K D LF L++AA+ L + L+DL
Sbjct: 60 YCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDL 119
Query: 123 TSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
T A+A M GK+P +RE F++ +D T EE+ E
Sbjct: 120 TCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAE 153
>AT1G20140.1 | Symbols: ASK4, SK4 | SKP1-like 4 |
chr1:6986430-6987079 FORWARD LENGTH=163
Length = 163
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 15 KPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILD 74
K + L++SDG ++E VA + Q I H + I LP V+ A+L+ +++
Sbjct: 5 KKMIILKSSDGESFEIEEAVA----VKSQTIKHMIEDDCADNGIPLPN-VTGAILAKVIE 59
Query: 75 YCRFHQRQGRS------------NKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDL 122
YC+ H N E K++D +F+K D LF L+ AA+ L + L+DL
Sbjct: 60 YCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDL 119
Query: 123 TSCAIARVMEGKSPEVIREMFHLPDDLTEEEKLE 156
T A+A M GK+PE +R F++ +D T EE+ E
Sbjct: 120 TCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAE 153
>AT5G42190.1 | Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 family protein |
chr5:16854495-16855516 REVERSE LENGTH=171
Length = 171
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +++ VA L Q I H + I LP V+ +LS +++YC+ H
Sbjct: 9 LKSSDGENFEIDEAVA----LESQTIKHMIEDDCTDNGIPLPN-VTSKILSKVIEYCKRH 63
Query: 80 ---------------------QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKS 118
G S+++ K++D +FIK D LF L+ AA+ L +K
Sbjct: 64 VEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKG 123
Query: 119 LVDLTSCAIARVMEGKSPEVIREMFHLPDDLT 150
L+DLT +A +++GK+PE IR+ F++ +D T
Sbjct: 124 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 155
>AT2G03170.1 | Symbols: ASK14, SK14 | SKP1-like 14 |
chr2:961322-961771 FORWARD LENGTH=149
Length = 149
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 84/138 (60%), Gaps = 11/138 (7%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAIS-LP-QEVSPAMLSLILDYCR 77
L +SDG +VE VA ++ I +C ++ +P Q V+ +LS++++YC+
Sbjct: 8 LSSSDGESFEVEEAVARKLKIVEHMI-------EDDCVVTEVPLQNVTGKILSIVVEYCK 60
Query: 78 FHQRQGRSNKEKKSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSP 136
H S+ E K++DE+F+KK D +F L+ AA+ L +K L+DL++ +A ++ K+P
Sbjct: 61 KHVVDEESD-EFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTP 119
Query: 137 EVIREMFHLPDDLTEEEK 154
E IRE+F++ +D T EE+
Sbjct: 120 EEIREIFNIENDFTPEEE 137
>AT1G75950.1 | Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase
kinase-associated protein 1 | chr1:28516715-28517454
FORWARD LENGTH=160
Length = 160
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE VA L Q I H + + LP V+ +L+ +++YC+ H
Sbjct: 8 LKSSDGESFEVEEAVA----LESQTIAHMVEDDCVDNGVPLPN-VTSKILAKVIEYCKRH 62
Query: 80 QRQGRSNKEK-----------KSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIA 128
S E K++D F+K D LF L+ AA+ L +K+L+DLT +A
Sbjct: 63 VEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVA 122
Query: 129 RVMEGKSPEVIREMFHLPDDLT 150
+++GK+PE IR F++ +D T
Sbjct: 123 DMIKGKTPEEIRTTFNIKNDFT 144
>AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 |
chr3:7699777-7700235 REVERSE LENGTH=152
Length = 152
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L++SDG +VE E A C CQ I H + I LP EV+ +L ++++YC H
Sbjct: 8 LKSSDGHSFEVEEEAA--CQ--CQTIAHMSEDDCTDNGIPLP-EVTGKILEMVIEYCNKH 62
Query: 80 QRQGR---SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSP 136
S+++ K +D++F++K + +F L+ AA+ L +KSL+DL +A +++ +
Sbjct: 63 HVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTV 122
Query: 137 EVIREMFHLPDDLTEEEK 154
E R+ F++ +D T EE+
Sbjct: 123 EHTRKFFNIENDYTHEEE 140
>AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 |
chr3:7693481-7693939 REVERSE LENGTH=152
Length = 152
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR 77
+ L++S+G ++E E A C I I + T + + L +++ +L ++++YC
Sbjct: 6 IMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDN-----VILVLKMTSEILEMVIEYCN 60
Query: 78 FHQRQGR---SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGK 134
H S+ + + +D++F++KD + +F L AA+ L KSL+ L +A +++G
Sbjct: 61 KHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGN 120
Query: 135 SPEVIREMFHLPDDLTEEEK 154
+P+ +RE F++ +DLT EE+
Sbjct: 121 TPKQMREFFNIENDLTPEEE 140
>AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 |
chr4:16379003-16379461 FORWARD LENGTH=152
Length = 152
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 13 MLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLI 72
M + L +SDG +VE VA + Q I H I L V +L +
Sbjct: 1 MSSKMIVLMSSDGQSFEVEEAVA----IQSQTIAHMVEDDCVADGIPLAN-VESKILVKV 55
Query: 73 LDYCRFH---QRQGRSNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIAR 129
++YC+ H + S ++ ++DEKF+ + + +F L+ AA+ L +KSL+DLT +A
Sbjct: 56 IEYCKKHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVAD 115
Query: 130 VMEGKSPEVIREMFHLPDDLTEEEK 154
+++GK+PE IR F++ +D T EE+
Sbjct: 116 MIKGKTPEEIRSTFNIENDFTPEEE 140
>AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 |
chr4:16480022-16480480 REVERSE LENGTH=152
Length = 152
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR-F 78
L +SDG +VE VA + Q I H I L V +L +++YC+ +
Sbjct: 8 LMSSDGQSFEVEEAVA----IQSQTIAHMVEDDCVADGIPLAN-VESKILVKVIEYCKKY 62
Query: 79 HQRQGR--SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSP 136
H + S ++ +DEKF+ + + +F L+ AA+ L +KSL DLT +A +++GK+P
Sbjct: 63 HVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTP 122
Query: 137 EVIREMFHLPDDLTEEEK 154
E IR F++ +D T EE+
Sbjct: 123 EEIRSTFNIENDFTPEEE 140
>AT3G60020.1 | Symbols: ASK5, SK5 | SKP1-like 5 |
chr3:22164844-22165305 REVERSE LENGTH=153
Length = 153
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 16/144 (11%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLP--QEVSPAMLSLILDY 75
+ L++SDG +++ +VA I ++ G CA + + V+ +L +++DY
Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAI-NHMVEDG------CATDVIPLRNVTSKILKIVIDY 57
Query: 76 CRFHQRQGRSNKEKKSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAI-----AR 129
C H + + ++ K +D F+K +T LF ++ AA+ L ++SL+DLT + A
Sbjct: 58 CEKHVK-SKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQAD 116
Query: 130 VMEGKSPEVIREMFHLPDDLTEEE 153
++ GK+P+ IR F++ +DLT EE
Sbjct: 117 LLSGKTPDEIRAHFNIENDLTAEE 140
>AT2G20160.1 | Symbols: MEO, ASK17 | E3 ubiquitin ligase SCF complex
subunit SKP1/ASK1 family protein | chr2:8699672-8700124
REVERSE LENGTH=150
Length = 150
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L +SD +++ VA ++ H + AI L Q V+ +L++I++YC+ H
Sbjct: 8 LTSSDDECFEIDEAVARKMQMVA----HMIDDDCADKAIRL-QNVTGKILAIIIEYCKKH 62
Query: 80 QRQGRSNKEKKSYDEKFIKK-DTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEV 138
+ E ++D +F+K D + LF L+ AAD L + L +L + AIA K+
Sbjct: 63 VDDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNE 122
Query: 139 IREMFHLPDDLTEEEKLE 156
IRE+F++ +D T EE+ E
Sbjct: 123 IRELFNIENDYTPEEEEE 140
>AT1G10230.1 | Symbols: ASK18, SK18 | SKP1-like 18 |
chr1:3355600-3356151 FORWARD LENGTH=183
Length = 183
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 2 AEIDKGVIKPEMLKPYVWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAI-SL 60
+EI++ V M + L +SDG +++ VA +I + NCA ++
Sbjct: 15 SEIEEAVASLTMSSNKILLTSSDGESFEIDEAVARKFLIIVHMM-------EDNCAGEAI 67
Query: 61 PQE-VSPAMLSLILDYCRFHQRQ-------GRSNKEKKSYDEKFIKK-DTNQLFGLVKAA 111
P E V+ +LS I++Y + H + + K S+D KF++K D +F ++ AA
Sbjct: 68 PLENVTGDILSKIIEYAKMHVNEPSEEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAA 127
Query: 112 DSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLT 150
+ L + L+ S +A ++ K+PE +RE+F++ +D T
Sbjct: 128 NYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFT 166
>AT3G25650.1 | Symbols: ASK15, SK15 | SKP1-like 15 |
chr3:9335876-9336459 REVERSE LENGTH=177
Length = 177
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 26/150 (17%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAIS-LP-QEVSPAMLSLILDYCR 77
L +SDG QVE VA ++ + +C I+ +P Q V+ +LS++L+YC+
Sbjct: 8 LTSSDGESFQVEEVVARKLQIVKHLL-------EDDCVINEIPLQNVTGNILSIVLEYCK 60
Query: 78 FHQ------------RQGRSNKEKK----SYDEKFIKK-DTNQLFGLVKAADSLQLKSLV 120
H ++ + + E K ++D +F+K D +F L+ AA+ L ++ L+
Sbjct: 61 KHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLL 120
Query: 121 DLTSCAIARVMEGKSPEVIREMFHLPDDLT 150
LT +A ++ K+PE +RE+F++ +D T
Sbjct: 121 GLTCQTVADYIKDKTPEEVRELFNIENDFT 150
>AT3G60010.1 | Symbols: ASK13, SK13 | SKP1-like 13 |
chr3:22163094-22163558 REVERSE LENGTH=154
Length = 154
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 14 LKPYVWLQTSDGSIQQVEHEVA----TVCPLICQEIIHKGTGSSKNCAISLPQEVSPAML 69
+ V L +SDG QVE VA T+ +I + + G + V+ +L
Sbjct: 1 MSKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIAN---------VTGVIL 51
Query: 70 SLILDYCRFHQRQG----RSNKEKKSYDEKFIK--KDTNQLFGLVKAADSLQLKSLVDLT 123
S +++YC+ H S E K +D +F+K + ++ LF ++ AA+ L +K L+DL
Sbjct: 52 SKVIEYCKKHVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLG 111
Query: 124 SCAIARVMEGKSPEVIREMFHLPDDLT 150
+A ++ GK P+ IR + + +D T
Sbjct: 112 CQTVADMITGKKPDEIRALLGIENDFT 138
>AT2G03190.1 | Symbols: ASK16, SK16 | SKP1-like 16 |
chr2:964232-964744 FORWARD LENGTH=170
Length = 170
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 27/155 (17%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAI-SLPQE-VSPAMLSLILDYCR 77
L +SD +VE VA +I I +CA ++P E V+ +L+L+++YC+
Sbjct: 8 LTSSDDESFEVEEAVARKLKVIAHMI-------DDDCADKAIPLENVTGNILALVIEYCK 60
Query: 78 FH-----------------QRQGRSNKEKKSYDEKFIKK-DTNQLFGLVKAADSLQLKSL 119
H + E +++D +F+K+ D + L+ A + L ++ L
Sbjct: 61 KHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDL 120
Query: 120 VDLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEK 154
+ LT +A M+ SPE +RE+F++ +D T EE+
Sbjct: 121 LGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEE 155
>AT3G21840.1 | Symbols: ASK7, SK7 | SKP1-like 7 |
chr3:7695490-7695867 REVERSE LENGTH=125
Length = 125
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 18 VWLQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCR 77
+ L++SDG + ++E E A C Q I H + I + V+ +L ++++YC
Sbjct: 6 IMLKSSDGKMFEIEEETARQC----QTIAHMIEAECTDNVIPVSN-VTSEILEMVIEYCN 60
Query: 78 FHQRQGR---SNKEKKSYDEKFIKKDTNQLFGLVKAADSLQLKSLVDLTSCAIARVM 131
H S+++ K +D++F++KD +F L+ AA L +KSL+ L +A ++
Sbjct: 61 KHHVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117
>AT2G03160.1 | Symbols: ASK19, SK19 | SKP1-like 19 |
chr2:959645-960247 FORWARD LENGTH=200
Length = 200
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 46/176 (26%)
Query: 20 LQTSDGSIQQVEHEVATVCPLICQEIIHKGTGSSKNCAISLPQEVSPAMLSLILDYCRFH 79
L +SDG +VE VA ++ II ++K I +P V+ +L+ +++YC+ H
Sbjct: 8 LTSSDGESFKVEEVVARKLQIVGH-IIEDDCATNK---IPIPN-VTGEILAKVIEYCKKH 62
Query: 80 ---------------------------------------QRQGRSNKEK-KSYDEKFIKK 99
+ KEK +D KF+K
Sbjct: 63 VEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKD 122
Query: 100 -DTNQLFGLVKAADSLQLKSLVDLTSCAIARVMEGKSPEVIREMFHLPDDLTEEEK 154
D +F ++ AA+ L ++ L DL S IA ++ +PE +RE+F++ +D T EE+
Sbjct: 123 FDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEE 178