Miyakogusa Predicted Gene

Lj1g3v2657190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2657190.1 tr|B9I6K5|B9I6K5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807148 PE=4
SV=1,50.83,3e-18,seg,NULL,CUFF.29395.1
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06920.1 | Symbols: FLA21 | FASCICLIN-like arabinogalactan pr...    62   7e-11

>AT5G06920.1 | Symbols: FLA21 | FASCICLIN-like arabinogalactan
           protein 21 precursor | chr5:2142858-2143919 FORWARD
           LENGTH=353
          Length = 353

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   ASSCWCWFSVYFAASITLGVIAITATIHPSSKNSSPSQEI--TPLTQSLSRNASRALRKA 59
           +S C+    VYF  SI L  +AI+ T+  S  +S P+  I  +  + SLS NAS  LR++
Sbjct: 5   SSDCF----VYFILSIALAFMAISTTLR-SPPDSEPTIPIAFSSSSPSLSLNASNTLRQS 59

Query: 60  GYTHMADLLHRSXXX-XXXXQNTTFFAIKDSAFRNTS-LPRWFLKSLLLYHTTTTKASMK 117
            +  +A LLH S         NTT FAI+D++F NTS L   FLK LL YHT     SM 
Sbjct: 60  NFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMD 119

Query: 118 DL 119
           DL
Sbjct: 120 DL 121