Miyakogusa Predicted Gene

Lj1g3v2628750.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.3 tr|B9ICB1|B9ICB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1098219 PE=3
SV=1,76.25,0,seg,NULL; no description,NULL; ACETYL-COENZYME A
CARBOXYLASE CARBOXYL TRANSFERASE ALPHA,Acetyl-CoA c,CUFF.29363.3
         (261 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   253   7e-68
AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   253   7e-68

>AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  253 bits (647), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/265 (52%), Positives = 176/265 (66%), Gaps = 10/265 (3%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEELGQGEAIA+NLRTMFGLKVPI            ALAI C NKM MLEN+ FYVAS
Sbjct: 259 LKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGGALAIGCANKMLMLENAVFYVAS 318

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            LRIT++E  +L +ADGIIPEP+GGAHADP+WTSQQIK+A
Sbjct: 319 PEACAAILWKTSKAAPEAAEKLRITSKELVKLNVADGIIPEPLGGAHADPSWTSQQIKIA 378

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESE 180
           I + M E  KM  EELL HR  K+R IG F EG+P+EP RK  MK  E   S+   ++ E
Sbjct: 379 INENMNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEPSRKINMKKREAVFSDSRKLQGE 438

Query: 181 LQGLKKIILEAK------GPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKEL 234
           +  LK+ IL+AK       PS  +  E I+KL +E+D E T+A I++GL E++ + M+E 
Sbjct: 439 VDKLKEQILKAKETSTEAEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERL-TAMREE 497

Query: 235 SSKASNDSPNQQPLDGNLKEKVDKI 259
            SKAS++     P+   L EK++K+
Sbjct: 498 FSKASSEEHLMHPV---LIEKIEKL 519


>AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  253 bits (647), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/265 (52%), Positives = 176/265 (66%), Gaps = 10/265 (3%)

Query: 1   MKSEELGQGEAIAHNLRTMFGLKVPIXXXXXXXXXXXXALAIACPNKMFMLENSAFYVAS 60
           +KSEELGQGEAIA+NLRTMFGLKVPI            ALAI C NKM MLEN+ FYVAS
Sbjct: 259 LKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGGALAIGCANKMLMLENAVFYVAS 318

Query: 61  PDACAAILWXXXXXXXXXXXXLRITAQEHYRLGIADGIIPEPVGGAHADPTWTSQQIKLA 120
           P+ACAAILW            LRIT++E  +L +ADGIIPEP+GGAHADP+WTSQQIK+A
Sbjct: 319 PEACAAILWKTSKAAPEAAEKLRITSKELVKLNVADGIIPEPLGGAHADPSWTSQQIKIA 378

Query: 121 ITQAMEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESE 180
           I + M E  KM  EELL HR  K+R IG F EG+P+EP RK  MK  E   S+   ++ E
Sbjct: 379 INENMNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEPSRKINMKKREAVFSDSRKLQGE 438

Query: 181 LQGLKKIILEAK------GPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKEL 234
           +  LK+ IL+AK       PS  +  E I+KL +E+D E T+A I++GL E++ + M+E 
Sbjct: 439 VDKLKEQILKAKETSTEAEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERL-TAMREE 497

Query: 235 SSKASNDSPNQQPLDGNLKEKVDKI 259
            SKAS++     P+   L EK++K+
Sbjct: 498 FSKASSEEHLMHPV---LIEKIEKL 519