Miyakogusa Predicted Gene

Lj1g3v2628750.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628750.2 tr|Q9LLR0|Q9LLR0_SOYBN Carboxyl transferase alpha
subunit OS=Glycine max GN=accA-1 PE=3 SV=1,33.33,2e-18,seg,NULL;
coiled-coil,NULL,CUFF.29363.2
         (347 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   129   3e-30
AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   129   3e-30

>AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 189/353 (53%), Gaps = 38/353 (10%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESELQGL 60
           M E  KM  EELL HR  K+R IG F EG+P+EP RK  MK  E   S+   ++ E+  L
Sbjct: 383 MNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEPSRKINMKKREAVFSDSRKLQGEVDKL 442

Query: 61  KKIILEAK------GPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSKA 114
           K+ IL+AK       PS  +  E I+KL +E+D E T+A I++GL E++ + M+E  SKA
Sbjct: 443 KEQILKAKETSTEAEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERL-TAMREEFSKA 501

Query: 115 SNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQKLQKLDTVNRLMEVKSQQEK 174
           S++     P+   L EK++K+ +E  ++++    Y  LK KL  L   +R  +  S+   
Sbjct: 502 SSEEHLMHPV---LIEKIEKLKEEFNTRLTDAPNYESLKSKLNMLRDFSR-AKAASEATS 557

Query: 175 LRQELNQKLSDDT-KAKIATLMQAQEQGRTQEMISNGESTDKE----LEEKAV----EVY 225
           L++E+N++  +   + +I   ++A +     E+ S+G S+  E    L+EK +    EV 
Sbjct: 558 LKKEINKRFQEAVDRPEIREKVEAIK----AEVASSGASSFDELPDALKEKVLKTKGEVE 613

Query: 226 KELEGVFQSANLEVVGVRNRSVDG-----PLPPEIEQKIADLNNEIISEIDRVVNAEGLK 280
            E+ GV +S  LE+  V+    D           +++K+  LN EI S+I+ VV    +K
Sbjct: 614 AEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIK 673

Query: 281 GQIKKLESEIAQGSKD---------VEKMEAGIKERILAALDVTALNEKIERL 324
             ++ L+ E A+ SK          +E +E  IK++I  AL+ + L EK + L
Sbjct: 674 SMVELLKVETAKASKTPGVTEAYQKIEALEQQIKQKIAEALNTSGLQEKQDEL 726


>AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 189/353 (53%), Gaps = 38/353 (10%)

Query: 1   MEELTKMDEEELLHHRHLKFRSIGGFQEGKPVEPERKRRMKPSEVNSSNITDVESELQGL 60
           M E  KM  EELL HR  K+R IG F EG+P+EP RK  MK  E   S+   ++ E+  L
Sbjct: 383 MNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEPSRKINMKKREAVFSDSRKLQGEVDKL 442

Query: 61  KKIILEAK------GPSDPISKEPIQKLVNEVDQEITKALISMGLTEKVQSVMKELSSKA 114
           K+ IL+AK       PS  +  E I+KL +E+D E T+A I++GL E++ + M+E  SKA
Sbjct: 443 KEQILKAKETSTEAEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERL-TAMREEFSKA 501

Query: 115 SNDSPNQQPLDGNLKEKVDKIMQEIKSKMSQPGAYLGLKQKLQKLDTVNRLMEVKSQQEK 174
           S++     P+   L EK++K+ +E  ++++    Y  LK KL  L   +R  +  S+   
Sbjct: 502 SSEEHLMHPV---LIEKIEKLKEEFNTRLTDAPNYESLKSKLNMLRDFSR-AKAASEATS 557

Query: 175 LRQELNQKLSDDT-KAKIATLMQAQEQGRTQEMISNGESTDKE----LEEKAV----EVY 225
           L++E+N++  +   + +I   ++A +     E+ S+G S+  E    L+EK +    EV 
Sbjct: 558 LKKEINKRFQEAVDRPEIREKVEAIK----AEVASSGASSFDELPDALKEKVLKTKGEVE 613

Query: 226 KELEGVFQSANLEVVGVRNRSVDG-----PLPPEIEQKIADLNNEIISEIDRVVNAEGLK 280
            E+ GV +S  LE+  V+    D           +++K+  LN EI S+I+ VV    +K
Sbjct: 614 AEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIK 673

Query: 281 GQIKKLESEIAQGSKD---------VEKMEAGIKERILAALDVTALNEKIERL 324
             ++ L+ E A+ SK          +E +E  IK++I  AL+ + L EK + L
Sbjct: 674 SMVELLKVETAKASKTPGVTEAYQKIEALEQQIKQKIAEALNTSGLQEKQDEL 726