Miyakogusa Predicted Gene

Lj1g3v2628710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2628710.1 tr|G8A207|G8A207_MEDTR Remorin OS=Medicago
truncatula GN=MTR_128s0001 PE=2 SV=1,60,5e-19,FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Remorin_C,Remorin, C-terminal; Remorin_N,Remorin,
N-termina,CUFF.29379.1
         (141 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61260.1 | Symbols:  | Remorin family protein | chr3:22675403...   110   2e-25
AT2G45820.1 | Symbols:  | Remorin family protein | chr2:18863147...   101   2e-22
AT3G48940.1 | Symbols:  | Remorin family protein | chr3:18142863...    93   6e-20
AT5G23750.2 | Symbols:  | Remorin family protein | chr5:8010004-...    87   5e-18
AT5G23750.1 | Symbols:  | Remorin family protein | chr5:8010004-...    82   1e-16
AT1G63295.1 | Symbols:  | Remorin family protein | chr1:23474129...    59   1e-09

>AT3G61260.1 | Symbols:  | Remorin family protein |
           chr3:22675403-22676701 REVERSE LENGTH=212
          Length = 212

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 4/94 (4%)

Query: 33  PEVAADDSKALVVV--PEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKS 90
           PE   DDSKAL VV  P + P P  KP+S  SLDRDV LA+L KEKRLS+V+AWEESEKS
Sbjct: 59  PEQIFDDSKALTVVEKPVEEPAP-AKPAS-ASLDRDVKLADLSKEKRLSFVRAWEESEKS 116

Query: 91  KTENKAQKNLSDVVEWENSKKAALEAQLRKIEEM 124
           K ENKA+K ++DV  WENSKKAA+EAQL+KIEE 
Sbjct: 117 KAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQ 150


>AT2G45820.1 | Symbols:  | Remorin family protein |
           chr2:18863147-18864576 REVERSE LENGTH=190
          Length = 190

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 4/83 (4%)

Query: 39  DSKALVVVPEKTPVPENKP--SSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKA 96
           +SKAL VV  + P+ E+ P  +S GS DRDV LA+LEKEK+ S++KAWEESEKSK EN+A
Sbjct: 43  ESKALAVV--EKPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRA 100

Query: 97  QKNLSDVVEWENSKKAALEAQLR 119
           QK +SDV  WENSKKAA+EAQLR
Sbjct: 101 QKKISDVHAWENSKKAAVEAQLR 123


>AT3G48940.1 | Symbols:  | Remorin family protein |
           chr3:18142863-18144163 REVERSE LENGTH=175
          Length = 175

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 4/88 (4%)

Query: 37  ADDSKALV-VVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENK 95
           +DDSKA+V VV  K P  + K    GS+ RD  L  LE++KR+S +KAWEE+EKSK ENK
Sbjct: 28  SDDSKAIVLVVAAKEPTEDKKV---GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENK 84

Query: 96  AQKNLSDVVEWENSKKAALEAQLRKIEE 123
           AQK +S V  WENSKKA++EA+L+KIEE
Sbjct: 85  AQKKISSVGAWENSKKASVEAELKKIEE 112


>AT5G23750.2 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=201
          Length = 201

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 6/87 (6%)

Query: 38  DDSKALV-VVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKA 96
           +DSKA+V VVP+   V E K   +GS++RD  LA +E EKR+S +KAWEE+EK K ENKA
Sbjct: 57  EDSKAIVPVVPK---VEEEK--KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKA 111

Query: 97  QKNLSDVVEWENSKKAALEAQLRKIEE 123
           +K LS +  WEN+KKAA+EA+L+K+EE
Sbjct: 112 EKKLSSIGSWENNKKAAVEAELKKMEE 138


>AT5G23750.1 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=202
          Length = 202

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 52/63 (82%)

Query: 61  GSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRK 120
           GS++RD  LA +E EKR+S +KAWEE+EK K ENKA+K LS +  WEN+KKAA+EA+L+K
Sbjct: 77  GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKK 136

Query: 121 IEE 123
           +EE
Sbjct: 137 MEE 139


>AT1G63295.1 | Symbols:  | Remorin family protein |
           chr1:23474129-23475300 REVERSE LENGTH=151
          Length = 151

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 40/55 (72%)

Query: 69  LAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVEWENSKKAALEAQLRKIEE 123
           L E+EKEKRL+ + AWEE+EK+K + KA K L  +  WEN+ K ALE  L+K+EE
Sbjct: 31  LVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKMEE 85