Miyakogusa Predicted Gene

Lj1g3v2627530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627530.1 Non Chatacterized Hit- tr|I3S582|I3S582_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,91.43,0,no
description,HAD-like domain; PMM,Eukaryotic phosphomannomutase;
HAD-like,HAD-like domain;
HAD-SF-,NODE_58623_length_1103_cov_76.969177.path2.1
         (247 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45790.1 | Symbols: ATPMM, PMM | phosphomannomutase | chr2:18...   426   e-120

>AT2G45790.1 | Symbols: ATPMM, PMM | phosphomannomutase |
           chr2:18855876-18857753 FORWARD LENGTH=246
          Length = 246

 Score =  426 bits (1096), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/245 (82%), Positives = 225/245 (91%)

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGVIALFDVDGTLTAPRK A  E+L F++ELRKVVT+GVVGGSDL KISEQLG T
Sbjct: 1   MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKT 60

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120
           VT+DYDY FSENGLVAHK GK IG +SLK  LGD+KLKE INFTLHYIADLDIPIKRGTF
Sbjct: 61  VTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTF 120

Query: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFR+GMLNVSPIGRNCSQEERDEFE+YDKVQNIRPKMV+ LRE+FAHLNLTFSIGGQIS
Sbjct: 121 IEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQIS 180

Query: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 240
           FDVFP+GWDKTYCL+YL+ F+EIHFFGDKTY+GGND+EIYES +TIGH+VTSP+DT+ +C
Sbjct: 181 FDVFPKGWDKTYCLQYLEDFSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKC 240

Query: 241 KSLFL 245
           K+LF+
Sbjct: 241 KALFM 245