Miyakogusa Predicted Gene

Lj1g3v2627520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2627520.1 tr|B9I7N6|B9I7N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571524 PE=4 SV=1,46.67,4e-17,
,gene.g33423.t1.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32120.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    74   8e-14
AT4G16050.1 | Symbols:  | Aminotransferase-like, plant mobile do...    57   1e-08
AT1G50830.1 | Symbols:  | Aminotransferase-like, plant mobile do...    55   7e-08
AT1G50750.1 | Symbols:  | Plant mobile domain protein family | c...    52   6e-07
AT1G51538.1 | Symbols:  | Aminotransferase-like, plant mobile do...    50   1e-06
AT5G18510.1 | Symbols:  | Aminotransferase-like, plant mobile do...    50   2e-06

>AT1G32120.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
           DURING: 4 anthesis, C globular stage, F mature embryo
           stage, petal differentiation and expansion stage, E
           expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
           Aminotransferase-like, plant mobile domain
           (InterPro:IPR019557), Protein of unknown function DUF716
           (InterPro:IPR006904); BEST Arabidopsis thaliana protein
           match is: Aminotransferase-like, plant mobile domain
           family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
           to 9656 proteins in 576 species: Archae - 4; Bacteria -
           1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
           Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
           BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
          Length = 1206

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 45/71 (63%)

Query: 1   MQFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSVL 60
           +QF  +QDVPG VP    T  +AW++Y RPI+D  LY P+RL EADVT  Y  WWK SV 
Sbjct: 406 LQFGYDQDVPGVVPARIETPELAWKDYIRPIADGMLYFPARLHEADVTVGYIRWWKLSVA 465

Query: 61  HHQDFAKNIVR 71
             Q  A+ I +
Sbjct: 466 VLQLGAEKIFK 476


>AT4G16050.1 | Symbols:  | Aminotransferase-like, plant mobile
           domain family protein | chr4:9092243-9094243 FORWARD
           LENGTH=666
          Length = 666

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 1   MQFRMNQDVP--GHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQS 58
           MQF + QDVP  G     N T+  AW++Y +P+    LY PSR+  A VTTRY  WW +S
Sbjct: 386 MQFGLAQDVPVLGTNHRRNFTEEEAWDDYNKPLVGLKLYFPSRVATASVTTRYRDWWAKS 445

Query: 59  V 59
           V
Sbjct: 446 V 446


>AT1G50830.1 | Symbols:  | Aminotransferase-like, plant mobile
           domain family protein | chr1:18835559-18837865 REVERSE
           LENGTH=768
          Length = 768

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 2   QFRMNQDVPGHVPV-FNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSV 59
           QF ++QD+PG      N T+  AW +Y + +   NLY+PSRL +  VT RY  WW +SV
Sbjct: 396 QFGLDQDLPGLATCQRNSTEKEAWNDYNKSLIGLNLYMPSRLDQGSVTARYRVWWLKSV 454


>AT1G50750.1 | Symbols:  | Plant mobile domain protein family |
           chr1:18809184-18812050 REVERSE LENGTH=816
          Length = 816

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%)

Query: 2   QFRMNQDVPGHVPVFNGTKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSVLH 61
           QF M QDVP  V   N ++  AW +Y +PI+D  L++PSR     VT  +  WW++S   
Sbjct: 310 QFGMLQDVPCAVNQNNLSQEAAWNDYNKPINDLALFIPSRSAIPRVTPTFCEWWRRSFPE 369

Query: 62  HQDFAKN 68
            Q  +K+
Sbjct: 370 FQTSSKD 376


>AT1G51538.1 | Symbols:  | Aminotransferase-like, plant mobile
           domain family protein | chr1:19113183-19115273 FORWARD
           LENGTH=696
          Length = 696

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1   MQFRMNQDVPGHVPVFNG-TKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSV 59
           MQF + QD+PG V   +  T+  AW+ Y + +    LY+PSR+    VT RY  WW +S+
Sbjct: 370 MQFGLAQDLPGLVTDHSSFTEKEAWDGYNKSLDGLMLYIPSRVATTSVTERYRDWWLKSI 429


>AT5G18510.1 | Symbols:  | Aminotransferase-like, plant mobile
           domain family protein | chr5:6141778-6143886 REVERSE
           LENGTH=702
          Length = 702

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 2   QFRMNQDVPGHVPVFNG-TKAIAWENYCRPISDRNLYLPSRLFEADVTTRYASWWKQSVL 60
           QF ++QD+PG V      T+  AW++Y   +   NLYLPS+L    VT RY  WW +S  
Sbjct: 372 QFGLSQDLPGLVTRRRKITEKDAWDDYSNSLEGLNLYLPSQLDRGYVTARYQDWWFKSAS 431

Query: 61  HH 62
            +
Sbjct: 432 EY 433