Miyakogusa Predicted Gene

Lj1g3v2624810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2624810.1 Non Chatacterized Hit- tr|D7U7K5|D7U7K5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.62,5e-19,seg,NULL,CUFF.29304.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01840.1 | Symbols:  | unknown protein; Has 23 Blast hits to ...    59   8e-10

>AT1G01840.1 | Symbols:  | unknown protein; Has 23 Blast hits to 23
           proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:303650-304108 FORWARD LENGTH=152
          Length = 152

 Score = 58.9 bits (141), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 11  LAELIESLEQATFMAKQLXXXXXTNPTNLHQIXXXXXXXXXXXXVFLSTLHPPPAPENSV 70
           +AELI SLEQAT MA+Q+      N   L QI             FL+++ P    E S 
Sbjct: 7   VAELISSLEQATLMAQQIGTTVGQN--QLLQISSLRIAHQRLS-AFLASI-PTAEAEKSF 62

Query: 71  SSAN-GAATQPXXXXXXXXEETSKCAIENVEQKMKDCFIKNKRPKRRLSP 119
           SS       +         EE    AIE VE+KM++CFI+NKR KR LSP
Sbjct: 63  SSVEPMQLGEEEKGEAEPAEEERYSAIEKVEEKMRECFIRNKRLKRPLSP 112