Miyakogusa Predicted Gene

Lj1g3v2595920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2595920.1 tr|O64632|O64632_ARATH Expressed protein
OS=Arabidopsis thaliana GN=At2g45520 PE=2 SV=1,44.92,7e-19,seg,NULL;
coiled-coil,NULL,CUFF.29388.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45520.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    83   1e-16

>AT2G45520.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 260
           Blast hits to 238 proteins in 75 species: Archae - 0;
           Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
           Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
           | chr2:18755209-18756268 REVERSE LENGTH=205
          Length = 205

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 88/188 (46%), Gaps = 29/188 (15%)

Query: 1   MGGKGQRRREKNYKAAHGGYSGLPPPPVLSQLDALPSKLRQLISITRHQNGATAASELKK 60
           MGGKG++RREKNY AAHGG + LPPPP  S+ D +PS LR L++ T              
Sbjct: 1   MGGKGKKRREKNYLAAHGGPARLPPPPDRSKQDDVPSTLRILMNYT-------------- 46

Query: 61  KDDGHAQNVDTSGQLKATQHSENGHEQLIPSSAND-------XXXXXXXXXEVKDLRF-- 111
                    D++ Q+   +      E ++P++ +D                ++ DLRF  
Sbjct: 47  ----SPSPHDSTKQVVEKKEKLKKAEVVVPATESDGDDSVVEKKKKKRKRNQMTDLRFEN 102

Query: 112 -LAEMDKTRSQLXXXXXXXXXXXXXXXXXXXXXXXXXLDFPGHEKIKFGDVVQAPPKLAA 170
            LAE+D    +                           +FP HE+I+FGDVVQAP KLA 
Sbjct: 103 ELAEIDGRSKRKERKKKYWEAKKQKKNKGKTEDTLRE-NFPKHEQIRFGDVVQAPLKLAV 161

Query: 171 IPRAFKNT 178
           +P+A K+T
Sbjct: 162 VPKARKST 169