Miyakogusa Predicted Gene

Lj1g3v2584560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2584560.1 Non Chatacterized Hit- tr|D7T912|D7T912_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.48,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,TC69242.path2.1
         (113 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein ...   176   2e-45
AT1G68410.2 | Symbols:  | Protein phosphatase 2C family protein ...    97   3e-21
AT1G68410.1 | Symbols:  | Protein phosphatase 2C family protein ...    97   3e-21
AT1G09160.1 | Symbols:  | Protein phosphatase 2C family protein ...    68   1e-12
AT1G09160.2 | Symbols:  | Protein phosphatase 2C family protein ...    68   1e-12

>AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:17373004-17375305 REVERSE LENGTH=428
          Length = 428

 Score =  176 bits (447), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/116 (74%), Positives = 103/116 (88%), Gaps = 3/116 (2%)

Query: 1   MLKAIFRKKSSDSS--MDKEYMEPDEVRELYEEGSAMLSERLETKYPLCNMFKLFICAVC 58
           MLK++F++K+SDSS  ++KEY EPD V EL+EEGSAMLSERL+TKYPLCNMFKLF+CAVC
Sbjct: 313 MLKSMFKRKTSDSSSNIEKEYAEPDVVEELFEEGSAMLSERLDTKYPLCNMFKLFMCAVC 372

Query: 59  QVEIKPGEGISIHEGAPNPLKLRPWDGPFLCSSCQEKKEAMEGKGAS-DRLSSGSD 113
           QVE+KPGEG+SIH G+ N  KLRPWDGPFLC+SCQ+KK+AMEGK +S DR SS SD
Sbjct: 373 QVEVKPGEGVSIHAGSDNCRKLRPWDGPFLCASCQDKKDAMEGKRSSGDRHSSESD 428


>AT1G68410.2 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:25650262-25652255 REVERSE LENGTH=436
          Length = 436

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)

Query: 5   IFRKKSSDSS-MDKEYMEPDEVRELYEEGSAMLSERL---ETKYPLCNMFKLFICAVCQV 60
           +FRKKS+ S+ + K+      V EL+EEGSAML+ERL   +          +F CA+CQ+
Sbjct: 327 LFRKKSNSSNKLSKKLSTVGIVEELFEEGSAMLAERLGSGDCSKESTTGGGIFTCAICQL 386

Query: 61  EIKPGEGISIHEGAPNPLKLRPWDGPFLCSSCQEKKEAMEGK 102
           ++ P EGIS+H G+     L+PW GPFLC+ C++KK+AMEGK
Sbjct: 387 DLAPSEGISVHAGSIFSTSLKPWQGPFLCTDCRDKKDAMEGK 428


>AT1G68410.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:25650262-25652255 REVERSE LENGTH=436
          Length = 436

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)

Query: 5   IFRKKSSDSS-MDKEYMEPDEVRELYEEGSAMLSERL---ETKYPLCNMFKLFICAVCQV 60
           +FRKKS+ S+ + K+      V EL+EEGSAML+ERL   +          +F CA+CQ+
Sbjct: 327 LFRKKSNSSNKLSKKLSTVGIVEELFEEGSAMLAERLGSGDCSKESTTGGGIFTCAICQL 386

Query: 61  EIKPGEGISIHEGAPNPLKLRPWDGPFLCSSCQEKKEAMEGK 102
           ++ P EGIS+H G+     L+PW GPFLC+ C++KK+AMEGK
Sbjct: 387 DLAPSEGISVHAGSIFSTSLKPWQGPFLCTDCRDKKDAMEGK 428


>AT1G09160.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:2953199-2955059 REVERSE LENGTH=428
          Length = 428

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 25  VRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGAPNPLKLRPWD 84
           V EL+EEGSA+L++RL           L  CAVCQ++  P E +S + G+      + W+
Sbjct: 342 VEELFEEGSAVLADRLGKDLLSNTETGLLKCAVCQIDESPSEDLSSNGGSIISSASKRWE 401

Query: 85  GPFLCSSCQEKKEAMEGKGASDRLSSGS 112
           GPFLC+ C++KK+AMEGK    R S GS
Sbjct: 402 GPFLCTICKKKKDAMEGK----RPSKGS 425


>AT1G09160.2 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:2953199-2955059 REVERSE LENGTH=428
          Length = 428

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 25  VRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGAPNPLKLRPWD 84
           V EL+EEGSA+L++RL           L  CAVCQ++  P E +S + G+      + W+
Sbjct: 342 VEELFEEGSAVLADRLGKDLLSNTETGLLKCAVCQIDESPSEDLSSNGGSIISSASKRWE 401

Query: 85  GPFLCSSCQEKKEAMEGKGASDRLSSGS 112
           GPFLC+ C++KK+AMEGK    R S GS
Sbjct: 402 GPFLCTICKKKKDAMEGK----RPSKGS 425