Miyakogusa Predicted Gene
- Lj1g3v2581180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2581180.1 Non Chatacterized Hit- tr|I1NFB8|I1NFB8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,29.31,1e-18,PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.29212.1
(414 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-129
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 230 1e-60
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 7e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 82 5e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 5e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 3e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 75 6e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 75 8e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 4e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 73 4e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 71 1e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 71 1e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 4e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 69 9e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 66 5e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 64 2e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 4e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 5e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 5e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 61 2e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 2e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 59 6e-09
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 59 7e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 57 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 57 2e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 56 4e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 56 5e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 55 6e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 54 2e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 53 5e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 52 6e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 52 7e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 52 7e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 1e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 51 2e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 49 7e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 9e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 49 9e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 49 9e-06
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 49 9e-06
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 457 bits (1175), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/377 (59%), Positives = 289/377 (76%), Gaps = 7/377 (1%)
Query: 39 QKPSNLDLHRHRFDS----ALVGIGMEEIVKEEVKDENHRRFRWTEIGHNITHEQNEAIS 94
+ P ++ H +R S A + IG E+V++E E R F W ++G N+T EQ+EAI+
Sbjct: 32 RNPLLVESHLNRLCSCKCNASLAIG--EVVEKE-DAEQSRSFNWADVGLNLTEEQDEAIT 88
Query: 95 KLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLY 154
++P KM+KRC+ALMRQIICFS EKG+ DLL AW++ M PIRA+WLS+LKEL+ ++ P Y
Sbjct: 89 RIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFY 148
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
++VAE +LL++SFE N RDYT IIHY GK NQ+E+AE L +MK RGF+ DQV LT MV
Sbjct: 149 IKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQ 208
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+YSKAG AEE F EI+LLGEPLD RSYGSMI AYIRAG+PE+GESLL EMD++EI A
Sbjct: 209 LYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICA 268
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
G EVYKALLR YS G+AEGA+RVFDA+Q+AGI PD K+CGL+I AY ++GQS+ AR+AF
Sbjct: 269 GREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAF 328
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRKX 394
ENM++AGI+ TD+C+ VL AYEKE KLN AL FL++LEK+ IM+G+EASA+LA WF+K
Sbjct: 329 ENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKL 388
Query: 395 XXXXXXXXXXRDFSTTR 411
R+FS+++
Sbjct: 389 GVVEEVELLLREFSSSQ 405
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 190/315 (60%), Gaps = 2/315 (0%)
Query: 77 RWTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIR 136
+W E+ I + EA + P +T +CK +M ++ E + S LL W ++++P R
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQ-EGDDPSGLLAEWAELLEPNR 349
Query: 137 AEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTA 196
+W++++ +L YL+VAE L E+SF +I DY+ +IH K N +E+ E IL
Sbjct: 350 VDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKK 409
Query: 197 MKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGM 256
M Q G D + T +VH+YSK+G+ +RA E FE ++ G D++ Y +MI Y+ AG
Sbjct: 410 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 469
Query: 257 PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP-DDKICG 315
P+ GE L++EM A+E+ A EVY ALLRAY+++G+A GA + ++Q A P +
Sbjct: 470 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 529
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
L ++AYG AGQ +KA+ F+ M++ G +P D+CI +++ AY+ E+ L+ AL L+ LEK+
Sbjct: 530 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 589
Query: 376 GIMVGEEASAILAGW 390
GI +G +L W
Sbjct: 590 GIEIGVITYTVLVDW 604
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
E N+ Y +I GK + E+A N++ M+ RG + + +T++ I+ KAG LDRA
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
F+++R G +D+ Y +MI AY R G+ + LL E+ + L +A
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA-- 514
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
G E A VF +G + D + G +I Y + FE M+ AG P
Sbjct: 515 --GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
I VL AY K+ + A ++++EG + +E
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N Y+ ++ ++++ EA ++ MK+ D M+ +Y + + A+ F
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+R + + SY +++ Y A + L M ++I Y +++ Y +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
E A + +Q GI P+ +I +G AG+ ++A F+ ++ +G+E
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388
+++VAYE+ + A L +L+ + E A ILA
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%)
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
+A D A F+E+R D+ +Y ++IT++ + GM + S L++M+ +
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
+Y L+ R+ + A +F ++ +GI PD +I YG A +AR+ + M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 338 KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
AG+ P ++L Y + K AL ++++
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++I+ GK EA ++ M + G + + V +T++ +Y + A F E++
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ LD + MI Y + M + + L + +I Y +LR Y G AE
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY---GEAE 379
Query: 294 ---GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
A +F +Q I + +IK YG + EKA + M+ GIEP
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 351 SVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
+++ + K KL+ A L G+ + +
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 5/227 (2%)
Query: 151 HPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT 210
H L+ E+ + AL + + Y+ +I GK + A + L M+Q D V+ +
Sbjct: 175 HGLFDEMRQRALAPDRYT-----YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYS 229
Query: 211 TMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR 270
++ + + +A F ++ G D +Y SMI Y +A + L++EM+
Sbjct: 230 NLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289
Query: 271 EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
+ + Y LL Y A VF ++ D C ++I YG ++A
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEA 349
Query: 331 RIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
F ++++ IEP ++L Y + A+ ++++ I
Sbjct: 350 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 21/318 (6%)
Query: 68 VKDENHRRFRWTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNA 127
+K + +R RW E G T N++ + ++ K+L R N +++A
Sbjct: 246 LKTKAEQRVRWVEEGEEDTKMSNKSSWHQEREGSR--KSLQR---ILDTNGDNWQAVISA 300
Query: 128 WVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFE--------VNIRDYTNIIH 179
+ KI KP R E+ ++K Y + E+FE R YT++IH
Sbjct: 301 FEKISKPSRTEFGLMVK--------FYGRRGDMHRARETFERMRARGITPTSRIYTSLIH 352
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPL 239
++EA + + MK+ G V + +V +SKAGH + A+ +F+E + + + L
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 240 DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
+ YG +I A+ + ER E+L+ EM+ I A +Y ++ Y+ + + + VF
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
++ G P G +I Y G+ KA MK G++ + ++ + K
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 360 SKLNTALEFLIDLEKEGI 377
A D+ KEG+
Sbjct: 533 KDWANAFAVFEDMVKEGM 550
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 19/257 (7%)
Query: 140 LSVLKELETMEH--------PLYLEVAEHALLEESFEV-----------NIRDYTNIIHY 180
+ +KE++ + H P+ A+ + S EV + + +I+
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
+ Q+E+A IL M G ++ T ++ Y+ G +A EYF ++ G +D
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 241 KRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300
+Y +++ A ++G + ++ +EM AR I S VY L+ ++R G+ A +
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 301 AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKES 360
++ G+ PD I A AG +A E M+ G++P + +++ + + S
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 361 KLNTALEFLIDLEKEGI 377
AL +++ GI
Sbjct: 814 LPEKALSCYEEMKAMGI 830
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
E++ + SF NI +I + + EA +++ MK+ G D T+ +
Sbjct: 719 EMSARNIPRNSFVYNI-----LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
SKAG ++RA + EE+ LG + ++Y ++I + RA +PE+ S EEM A I
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 276 SEVYKALLRA-YSRIGNAE-----GAQRVFDAIQLAGIIPD 310
VY LL + SR AE G + + AG+I D
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L E +V+I Y ++ C K +++ A + M R + + ++ +++ G
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ A + ++++ G D +Y S I+A +AG R +EEM+A + + Y
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKI 313
L++ ++R E A ++ ++ GI PD +
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 88/218 (40%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L E F + Y +I+ K ++ +A + MK+ G + + M++ + K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A FE++ G D Y ++I+A+ G +R ++EM + +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ Y++ G+ + VFD ++ G +P +I Q EKA + M AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMV 379
+ + ++ Y A E+ L+ EG+ V
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI 252
+ +K+ GF V ++++Y+K G + +A E ++ G + ++Y MI ++
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 253 RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
+ ++ E+M + +Y ++ A+ +GN + A + +Q P +
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
+I Y +G ++ F+ M+R G PT ++ ++ ++ A+E L ++
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 373 EKEGIMVGEEA-SAILAGW 390
G+ E + I+ G+
Sbjct: 651 TLAGVSANEHTYTKIMQGY 669
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 82/201 (40%)
Query: 169 VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+N Y II+ + +E AE ++ M++ G I TM+ Y+ +
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
F+ ++ G +YG +I Y + G + + M + + Y ++ + +
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
+ + A VF+ + G+ PD + +I A+ G ++A + M++ PT R
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 349 IGSVLVAYEKESKLNTALEFL 369
++ Y K + +LE
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVF 612
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
N + Q V A + P GL++K YG G +AR FE M+ GI PT R
Sbjct: 290 NGDNWQAVISAFEKISK-PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 351 SVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
S++ AY ++ AL + +++EGI + +++ G F K
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK 391
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + + N Y +IH G+ N L EA N+ M++ G D+V T++ I++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR----------- 270
LD A + ++ ++ G D +Y +I +AG L EM +
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 271 --EIYAGSEVYKALLRAYSRIGNA----------------------EGAQRVFDAIQLAG 306
+++A + Y+ L+ Y + NA E A+ VF +Q
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
IPD+ + GL++ +G AG EKA ++ M AG+ P S+L + + +K+ A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 367 EFLIDLEKEGI 377
E L ++ G+
Sbjct: 630 ELLQNMLALGL 640
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ F+ + YT ++ G+ Q +L M + G + V ++H Y +A +L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A F +++ G D+ +Y ++I + +AG + + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ G+ A ++F + G P+ +++ + A + A + +M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 344 PTDRCIGSVLV 354
P D+ S+++
Sbjct: 537 P-DKVTYSIVM 546
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
FE + Y+ ++ G LEEAE + T M+Q+ +I D+ + +V ++ KAG++++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
++++ + G + + S+++ ++R LL+ M A + + Y LL
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%)
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI 252
+L M+ +G D+ +T++ ++ G L A+E+F E++ G +Y +++ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 253 RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
+AG+ S+L+EM+ A S Y L+ AY R G ++ A V + + G++P+
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
VI AYG AG+ ++A F +MK AG P +VL K+S+ N ++ L D+
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 373 EKEG 376
+ G
Sbjct: 448 KSNG 451
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
+ ++ C + L EA+ +K G+ V ++ ++ KAG A +E+
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
P D +Y ++ AY+RAG + ++E M + + + Y ++ AY + G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A ++F +++ AG +P+ V+ G +S + +MK G P
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K L +E T K+ G+ D VI +M+ I+++ D+AE E IR G D
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+Y S++ Y+R G + E +L+ ++ ++ Y +++ + R G + A R+ +
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
GI P + Y G + E M + P + V+ Y + K
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKY 787
Query: 363 NTALEFL 369
+ A++F+
Sbjct: 788 SEAMDFV 794
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 111/279 (39%), Gaps = 20/279 (7%)
Query: 117 EKGNVSDLLNAWVKIMKP--IRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDY 174
E G V+ NA +++ + E LSVLKE+E E S + Y
Sbjct: 313 EPGTVT--YNALLQVFGKAGVYTEALSVLKEME----------------ENSCPADSVTY 354
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
++ + +EA ++ M ++G + + + TT++ Y KAG D A + F ++
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
G + +Y ++++ + +L +M + + +L G +
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
RVF ++ G PD +I AYG G A + M RAG ++L
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 355 AYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
A ++ + + D++ +G E + +++ + K
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N Y ++ GK ++ E +L MK G ++ TM+ + G F
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E++ G D+ ++ ++I+AY R G + EM A Y ALL A +R
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
G+ + V ++ G P + L+++ Y G
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ +++ ++N ++AE IL ++++ G D V +++ +Y + G +AEE + +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D SY ++I + R G+ + +L EM R I Y + Y+ +G
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
+ V + + P++ +V+ Y AG+ +A
Sbjct: 754 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 1/171 (0%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D ++ V I + A + ++I L LD R+Y +++ AY R G E+ L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNA-EGAQRVFDAIQLAGIIPDDKICGLVIKAYGM 323
E M Y +L + ++G + V D ++ G+ D+ C V+ A
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 324 AGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
G +A+ F +K G EP ++L + K AL L ++E+
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + + N Y +IH G+ N L EA N+ M++ G D+V T++ I++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR----------- 270
LD A + ++ ++ G D +Y +I +AG L EM +
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 271 --EIYAGSEVYKALLRAYSRIGNA----------------------EGAQRVFDAIQLAG 306
+++A + Y+ L+ Y + NA E A+ VF +Q
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
IPD+ + GL++ +G AG EKA ++ M AG+ P S+L + + +K+ A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 367 EFLIDLEKEGI 377
E L ++ G+
Sbjct: 630 ELLQNMLALGL 640
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ F+ + YT ++ G+ Q +L M + G + V ++H Y +A +L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A F +++ G D+ +Y ++I + +AG + + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ G+ A ++F + G P+ +++ + A + A + +M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 344 PTDRCIGSVLV 354
P D+ S+++
Sbjct: 537 P-DKVTYSIVM 546
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
FE + Y+ ++ G LEEAE + T M+Q+ +I D+ + +V ++ KAG++++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
++++ + G + + S+++ ++R LL+ M A + + Y LL
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + + N Y +IH G+ N L EA N+ M++ G D+V T++ I++KAG
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR----------- 270
LD A + ++ ++ G D +Y +I +AG L EM +
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 271 --EIYAGSEVYKALLRAYSRIGNA----------------------EGAQRVFDAIQLAG 306
+++A + Y+ L+ Y + NA E A+ VF +Q
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
IPD+ + GL++ +G AG EKA ++ M AG+ P S+L + + +K+ A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 367 EFLIDLEKEGI 377
E L ++ G+
Sbjct: 630 ELLQNMLALGL 640
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ F+ + YT ++ G+ Q +L M + G + V ++H Y +A +L+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A F +++ G D+ +Y ++I + +AG + + + M A + + Y ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ G+ A ++F + G P+ +++ + A + A + +M+ AG E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 344 PTDRCIGSVLV 354
P D+ S+++
Sbjct: 537 P-DKVTYSIVM 546
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
FE + Y+ ++ G LEEAE + T M+Q+ +I D+ + +V ++ KAG++++A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
++++ + G + + S+++ ++R LL+ M A + + Y LL
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
E ++ Y ++ K Q++ A IL M + + + V +T++ ++KAG D A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
F E+R LG LD+ SY ++++ Y + G E +L EM + I Y ALL Y
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ G + ++VF ++ ++P+ +I Y G ++A F K AG+
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ A K + +A+ + ++ KEGI
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y+ +I K + +EA N+ M+ G D+V T++ IY+K G + A +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ +G D +Y +++ Y + G + + + EM + Y L+ YS+
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G + A +F + AG+ D + +I A G A + M + GI P
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 350 GSVLVAYEKESKLNTALEF 368
S++ A+ + + ++ + ++
Sbjct: 588 NSIIDAFGRSATMDRSADY 606
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHN-QLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
+++ E N+ Y +I CGK + ++ M++ G D++ +++ + S+
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G + A F+E+ D SY +++ A + G + +L +M + I
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
Y ++ +++ G + A +F ++ GI D ++ Y G+SE+A M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
GI+ ++L Y K+ K + + ++++E ++
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
EEA ++ MK+ M+++Y KA + + + E+R + +Y ++
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
+ A+ R G+ E+ E + E++ + VY AL+ +YSR G GA +F +Q G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
PD +++ AYG AG A FE MKR GI PT + +L AY K +
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 368 FLIDLEKEGI 377
+ ++ + G+
Sbjct: 448 IVKEMSENGV 457
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 149 MEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVI 208
M LY E+ H + NI YT +++ + E+AE I +++ G D +
Sbjct: 304 MSWKLYCEMRSHQC-----KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
++ YS+AG+ A E F ++ +G D+ SY M+ AY RAG+ E++ EEM
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
I + + LL AYS+ + + + + G+ PD + ++ YG GQ
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 329 K 329
K
Sbjct: 479 K 479
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L E+ E ++ Y ++ + A I + M+ G D+ MV Y +AG
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
AE FEE++ LG +S+ +++AY +A + E++++EM + + V +
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+L Y R+G +++ ++ D ++I YG AG E+ F +K
Sbjct: 467 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 526
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
P S + AY ++ LE ++ G
Sbjct: 527 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 41/277 (14%)
Query: 157 VAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
V E L + SF+ ++ + +I G+ Q +EAE++ + + ++ + ++ Y
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 217 SKAGHLDRAEEYFEEI-------RLLG--------EPLDKR------------------- 242
AG ++RAE E+ + +G E L KR
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 243 -----SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQR 297
+Y MI Y +A L EM + + Y AL+ A++R G E A+
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 298 VFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV-AY 356
+F+ +Q G+ PD + ++++Y AG A F M+ G EP DR +++V AY
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP-DRASYNIMVDAY 401
Query: 357 EKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+ + A ++++ GI ++ +L + K
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
EEA I T M+++G + ++ T++ Y+K+ H++ E F E+R G +Y +
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGN-AEGAQRVFDAIQLAG 306
+ AY R P+ E+LL EM+ + + Y L+ AY R ++ A F ++ G
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG 480
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
+ P +I AY ++G EKA +FE M + GI+P+ SVL A+ + +
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 367 E 367
E
Sbjct: 541 E 541
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR-AEEY 228
++R Y I + ++A + AM + D V ++ KAG + E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
FE++ G + +G ++ ++ G+ E + EM+ + I + + VY L+ AY++
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
+ E + +F ++ G+ P +++ AY Q + M+ G+EP +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 349 IGSVLVAYEKESKL-NTALEFLIDLEKEGIMVGEEASAIL------AGWFRK 393
++ AY + K+ + A + + ++K G+ + L +GW K
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 124 LLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGK 183
L++A+ + M+P E ++L+E+E + E N++ YT +I G+
Sbjct: 420 LMDAYARRMQPDIVE--TLLREMEDL----------------GLEPNVKSYTCLISAYGR 461
Query: 184 HNQLEE-AENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
++ + A + MK+ G T ++H YS +G ++A FEE+ G
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 243 SYGSMITAYIRAGMPERGESLLE--EMDAREIYAGSEV-YKALLRAYSRIGNAEGAQRVF 299
+Y S++ A+ R+G + G+ L+E ++ RE G+ + Y LL +++ G A+ V
Sbjct: 522 TYTSVLDAFRRSG--DTGK-LMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
G+ P +++ AY GQ K + M ++P +++ A+
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
EEA ++ MK+ M+++Y KA + + + E+R + +Y ++
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
+ A+ R G+ E+ E + E++ + VY AL+ +YSR G GA +F +Q G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
PD +++ AYG AG A FE MKR GI PT + +L AY K +
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 368 FLIDLEKEGI 377
+ ++ + G+
Sbjct: 426 IVKEMSENGV 435
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 149 MEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVI 208
M LY E+ H + NI YT +++ + E+AE I +++ G D +
Sbjct: 282 MSWKLYCEMRSHQC-----KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
++ YS+AG+ A E F ++ +G D+ SY M+ AY RAG+ E++ EEM
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
I + + LL AYS+ + + + + G+ PD + ++ YG GQ
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 329 K 329
K
Sbjct: 457 K 457
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L E+ E ++ Y ++ + A I + M+ G D+ MV Y +AG
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
AE FEE++ LG +S+ +++AY +A + E++++EM + + V +
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+L Y R+G +++ ++ D ++I YG AG E+ F +K
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
P S + AY ++ LE ++ G
Sbjct: 505 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 41/277 (14%)
Query: 157 VAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
V E L + SF+ ++ + +I G+ Q +EAE++ + + ++ + ++ Y
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 217 SKAGHLDRAEEYFEEI-------RLLG--------EPLDKR------------------- 242
AG ++RAE E+ + +G E L KR
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 243 -----SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQR 297
+Y MI Y +A L EM + + Y AL+ A++R G E A+
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 298 VFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV-AY 356
+F+ +Q G+ PD + ++++Y AG A F M+ G EP DR +++V AY
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP-DRASYNIMVDAY 379
Query: 357 EKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+ + A ++++ GI ++ +L + K
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 144/343 (41%), Gaps = 51/343 (14%)
Query: 74 RRFRWTEIGHNITHEQNEAISKLPFKMTK-RCKALMRQIICFSAEKGNVSDLLNAWVKIM 132
RRF+W H EA+ F+M + +++Q+ ++ G W+K
Sbjct: 305 RRFKWG-------HAAEEALHNFGFRMDAYQANQVLKQMDNYANALG-----FFYWLKRQ 352
Query: 133 KPIRAE---WLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEE 189
+ + + +++ L + + ++ + + N Y +IH G+ N L+E
Sbjct: 353 PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 190 AENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMIT 249
A N+ M++ G D+V T++ I++KAG LD A + ++ ++ G D +Y +I
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 250 AYIRAGMPERGESLLEEMDAR-------------EIYAGSEVYKALLRAYSRIGNA---- 292
+AG L EM + ++A + Y+ L+ Y + NA
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 293 ------------------EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
E A+ VF +Q +PD+ + GL++ +G AG +KA +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ M +AG+ P S+L + + +++ A L + G+
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
+Y + E L ++F Y+ II+ GK L A + M +G + V M
Sbjct: 451 MYQRMQEAGLSPDTFT-----YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ +++KA + + A + + +++ G DK +Y ++ G E E + EM +
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
VY L+ + + GN + A + + A+ AG+ P+ C ++ + + +A
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
Query: 333 AFENMKRAGIEPT 345
++M G+ P+
Sbjct: 626 LLQSMLALGLHPS 638
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 62/117 (52%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F+ + Y+ ++ G LEEAE + M+++ ++ D+ + +V ++ KAG++D+A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
++++ + G + + S+++ ++R +LL+ M A ++ + Y LL
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L++ + N+ Y ++I+ ++ EA ++ M G + + +++ + K
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L A + F ++ G R Y +I AY + G + G +L EEM+ I Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ R GN E A+++FD + G +PD ++++ Y G+S KA + + M + G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEAS--AILAGWFRK 393
++P V+ Y KE L A +EKE + AS +L G+ +K
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K N+ + E + M +R + +++ K G +++A + E++++ G +
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 243 SYGSMITAYIR---AGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
SY ++I Y + G + +++L+EM ++ + L+ + + N G+ +VF
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
+ + P+ +I G+ +A + M AG++P +++ + K
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 360 SKLNTALEFLIDLEKEG 376
L AL+ ++ +G
Sbjct: 380 DMLKEALDMFGSVKGQG 396
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 171 IRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL--DRAEEY 228
++ Y ++ + + +A+ ++ AM+QRG + D + T+++ K+G L + A E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
+ +R G D +Y ++++A R + + E+M+A Y A++ Y R
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G A A+R+F ++L G PD ++ A+ +EK + ++ M++ G +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 349 IGSVLVAYEKESKLNTALEFLIDLE 373
+++ Y K+ +L+ AL+ D++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 8/279 (2%)
Query: 102 KRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHA 161
+R K L +I+ + + V+D+L+A + M P ++ V+K + LEV E
Sbjct: 125 ERVKFLTDKILSLKSNQF-VADILDARLVQMTP--TDYCFVVKSVGQESWQRALEVFEWL 181
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQV-ILTTMVHIYSKAG 220
L N R I+ G+ NQ A I T + + D+V + M+ +YS++G
Sbjct: 182 NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSG 239
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAG--MPERGESLLEEMDAREIYAGSEV 278
+A+E + +R G D S+ ++I A +++G P LL+ + + +
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAIT 299
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
Y LL A SR N +GA +VF+ ++ PD +I YG G + +A F ++
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G P S+L A+ +E E ++K G
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
IR Y +I K ++ +AE +++ M++ F + I +M+ +Y+ + + +
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ I+ G D+ +Y ++I Y R PE G L+++M + + YK+L+ A+ +
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
E A+++F+ + G+ D ++K +G KA + MK AGIEPT +
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATM 1070
Query: 350 GSVLVAYEKESKLNTALEFLIDLE 373
++V+Y A + L +L+
Sbjct: 1071 HLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++++ + E+ + + M++ GF D++ T++H+Y K G LD A + +++++
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 234 -LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
L G D +Y +I + +A +L+ EM I + Y AL+ Y++ G
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
E A+ F + +G PD+ +++ ++ KA + +M G P+ +
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 353 LVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
++ KE++ + + + D+E+ M E S++L
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL 584
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%)
Query: 190 AENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMIT 249
A +L ++ G D + T++ S+ +LD A + FE++ D +Y +MI+
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 250 AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
Y R G+ E L E++ + + + Y +LL A++R N E + V+ +Q G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
D+ +I YG GQ + A +++MK D +VL+
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 211 TMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR 270
T++H H A + F ++RL G + SM+ Y + G PE ++ + + +
Sbjct: 686 TLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETK 745
Query: 271 EI-YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEK 329
+A S +Y ++ AY + + A+ V ++ +G PD K ++ AY G E+
Sbjct: 746 GFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYER 805
Query: 330 ARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
AR F M R G PT I +L A + +L + +L+ G + + + ++
Sbjct: 806 ARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLD 865
Query: 390 WFRK 393
F +
Sbjct: 866 AFAR 869
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 91/201 (45%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
++H +LEE ++ ++ GF + + M+ +++AG++ ++ + ++ G
Sbjct: 828 LLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAG 887
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
R Y MI + E ++ EM+ ++ ++L+ Y+ I + +
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 297 RVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
+V+ I+ G+ PD+ +I Y + E+ + + M+ G++P S++ A+
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 357 EKESKLNTALEFLIDLEKEGI 377
K+ L A + +L +G+
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGL 1028
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++H C + EA + + ++ G + + +MV +Y K G + A + +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 234 LLG-----EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
G P+ Y +I AY + + ++ ES++ + + + +L+ AY++
Sbjct: 744 TKGFHFACSPM----YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ 799
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G E A+ +F+ + G P + +++ A + G+ E+ + E ++ G + +
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 349 IGSVLVAYEK 358
I +L A+ +
Sbjct: 860 ILLMLDAFAR 869
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT+II GK ++AE+++ ++Q G D +++ Y++ G +RA F +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G S ++ A G E ++EE+ +L A++R GN
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++++ +++ AG +P ++ ++I+ + A I M+ A +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK 924
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L++ +++ Y I+H K L EA+ + M +R D LT ++ + K G+
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L A E F++++ LD +Y +++ + + G + + + +M ++EI Y
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A G+ A RV+D + I P IC +IK Y +G + E M G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE-GIMVGE--EASAILAGWFRK 393
P +++ + +E ++ A + +E+E G +V + ++IL G+ R+
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ +I Y +I +EEA ++ AM +GF T+++ K G +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
RA+E F E+ G D +Y S++ + G E + +M +R++ + +++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
++R GN + A F++++ AG+IPD+ I ++I+ Y G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L + Y +++ K + E E + + M+ R + D V ++M+ +++++G+
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD+A YF ++ G D Y +I Y R GM +L EM + Y
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+L + A ++F+ + + PD ++I + G + A F+ MK
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388
I ++L + K ++TA E D+ + I+ + +IL
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 169 VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+N+ +++ K ++E+ L+ ++++G D V T++ YS G ++ A E
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
+ G +Y ++I + G ER + + EM + S Y++LL +
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G+ ++VF ++ ++PD ++ + +G +KA + F ++K AG+ P D
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP-DNV 411
Query: 349 IGSVLV-AYEKESKLNTALEFLIDLEKEG 376
I ++L+ Y ++ ++ A+ ++ ++G
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ F++ IR Y + +L EA T ++ +GF ++ + G ++
Sbjct: 165 DSVFDLLIRTYV-------QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A ++EI G ++ + M+ A + G E+ + L ++ + +Y Y L+
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
AYS G E A + +A+ G P VI G+ E+A+ F M R+G+
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 344 PTDRCIGSVLV 354
P S+L+
Sbjct: 338 PDSTTYRSLLM 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 2/206 (0%)
Query: 174 YTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
YT +I YC K + A N+ M Q+G D V T++H K L A++ F E+
Sbjct: 413 YTILIQGYCRK-GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
D + +I + + G + L ++M + I Y LL + ++G+
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
+ A+ ++ + I+P +++ A G +A ++ M I+PT S+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 353 LVAYEKESKLNTALEFLIDLEKEGIM 378
+ Y + + FL + EG +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFV 617
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ FE +I +T++I+ N++EEA +++ M + G D V+ TT++ K GH
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A F+++ G D Y S++ +G +SLL M R+I + A
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A+ +++ + I P+ +I + M G ++AR F M+ G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
P S++ + K K++ A++ ++ ++G+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ S NI YT++I+ ++EA + M+ +G D V T++++ + K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D A + F E+ G + +Y ++I + + G P + + M +R + Y
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 282 LLRAYSRIGNAEGAQRVFDAIQ---LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
LL G + A +F+ +Q + G+ P+ +++ G+ EKA + FE+M+
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFR 392
+ ++ ++ K K+ A+ L +G+ + +++G FR
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K LE++E + M +RG D TT++ + G RA E+FE++ G D
Sbjct: 187 KSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNV 246
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+ +MI AY RAG + SL + + + + L+R Y GN +G +++ +
Sbjct: 247 TMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
+ G+ P+ I +I + G A + +A+I ++++ G P +++ AY +
Sbjct: 307 KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYG 366
Query: 363 NTALEFLIDLEKEGI 377
+ AL +++++G+
Sbjct: 367 DDALAIYREMKEKGL 381
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 119 GNVSDLLNAWVKI----MKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDY 174
GN LN + ++ +KP + ++ + + P ++ L+ F N Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
++ G+ ++A I MK++G ++ T++ + + ++D A E F++++
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 235 L--GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
+P D ++ S+IT Y +G E+ L +M V ++++ Y +
Sbjct: 414 CETCDP-DSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
+ R FD + GI PDD+ CG ++ E ++
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKL 512
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 192 NILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAY 251
N+L MK + ++ + ++ K+ L+++E+ F+E+ G D ++ ++I+
Sbjct: 164 NLLETMKPSREV---ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
+ G+P+R E+M + + A++ AY R GN + A ++D + D
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 312 KICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+I+ YG++G + +E MK G++P
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
+I G+ ++ A ++ + + D V +T++ IY +G+ D +EE++ LG
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
+ Y +I + RA P + + + +++ Y AL+RAY R + A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 297 RVFDAIQLAGII------------------------------------PDDKICGLVIKA 320
++ ++ G+ PD +I
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 321 YGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLN 363
Y +G+ +A A M+ AG EPT + SV+ Y K +++
Sbjct: 431 YACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
H ++EE+ E ++ Y II CGK E+A IL M + T ++ + +A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
+ A F + +G ++ S++ ++ R G+ + E++L + I + +
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
A + AY + G E A + + ++ + PD++ V+ Y A ++ R FE MK
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
+ I P+ C +L Y K + + E L
Sbjct: 591 SDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y ++ K ++EA + M+ G + + +++++ ++G D + F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E++ D +Y +I + G + +L +M I E Y+ ++ A +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E A+++ + I+P K VI+A+G A E+A +AF M G P+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGI 377
S+L ++ + + + L L GI
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
E + +I Y ++ C +EAE + M G + D + +V + K L++
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
+ E+ G D SY ++ AY ++G + + +M A + Y LL
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+ + G + +++F ++ + PD ++I+ +G G ++ F +M IEP
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 116/287 (40%), Gaps = 28/287 (9%)
Query: 113 CFSAEKGNVSDLLNAWVKIMKPI--RAEWLSVLKELETMEHPLYLEVAEH---------- 160
C K +S LN + + K R +W L+ + M+ ++ + EH
Sbjct: 95 CLDIFKNKLS--LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLG 152
Query: 161 --ALLEESFEV-----------NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQV 207
LL++ EV ++ YT +I+ G++ + E + +L MK +
Sbjct: 153 REGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSIL 212
Query: 208 ILTTMVHIYSKAG-HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE 266
T+++ ++ G + F E+R G D +Y ++++A G+ + E +
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 267 MDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
M+ I Y L+ + ++ E + + G +PD ++++AY +G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 327 SEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLE 373
++A F M+ AG P +L + + + + + ++++
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
H +LE N+ ++ K+ +EEAE + M++ G +C+ ++M+ IY++
Sbjct: 234 HMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIYTRL 292
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
D+AEE + ++ L ++ M+ AY + G E ES+L M+A Y
Sbjct: 293 RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAY 352
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ Y +I E AQ +F + G+ PD+ +I+ +G A E+A+ ++ +KR
Sbjct: 353 NTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR 412
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388
G +P + +++ K + A++ + D+ +G + S+IL
Sbjct: 413 CGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG----IGCQYSSILG 457
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F+ + + + +I+ C K ++ A M + G + + ++ +Y K +++ AE
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAE 265
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
F +R G + + +Y SMIT Y R + ++ E +++ M + E + +L AY
Sbjct: 266 FAFSHMRKFG-IVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAY 324
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
S+ G E A+ + +++ AG P+ +I YG + E A+ F + G+EP +
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
S++ + + A + +L++ G
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 3/228 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ +FE ++ Y +I C + QL +A I + + I +TM+ IY+ G
Sbjct: 518 DSAFESHL--YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFS 575
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD-AREIYAGSEVYKAL 282
AE+ + ++ G LD+ + ++ Y++AG E S+LE MD ++I +++ +
Sbjct: 576 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 635
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
LR Y + + Q ++ I+ +GI + ++ VI A ++ FE M R G
Sbjct: 636 LRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGF 695
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGW 390
P +L Y K E + ++ G++ + I+A +
Sbjct: 696 TPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAY 743
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ F V++ Y ++ GK Q+E+ +IL MK+ D M++IY + G +D
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDE 821
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
+ +E++ G D SY ++I AY GM E L++EM R I Y L+
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 285 AYSR 288
A R
Sbjct: 882 ALRR 885
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
++ + + ++ +++ + ++E AE+IL +M+ GF + + T++ Y K ++
Sbjct: 307 QDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKME 366
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A+ F + +G D+ SY SMI + RA E + +E+ S L+
Sbjct: 367 AAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++ G+ +GA + + + G I G++++AY G+ + + I
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGC-QYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIR 485
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFL 369
S+++AY K ++ L L
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLL 511
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ F N + ++ GK ++ + K+ G + D + T++ Y K
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKD 748
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ ++ G + +Y +++ AY + E+ S+L+ M Y
Sbjct: 749 YTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ Y G + V ++ +G+ PD +IKAYG+ G E+A + M+
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I P +++ A + + A+++ + +++ GI
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E ++ + +I K +L EAE + M R D V +M++ + K
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D A+ F+ L+ P D ++ ++I Y RA + G LL E+ R + A + Y
Sbjct: 417 FDDAKHMFD---LMASP-DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + N AQ +F + G+ PD C +++ + + E+A FE ++ +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I+ ++ K SK++ A + L G+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 90/208 (43%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ + II + +++E +L + +RG + + T++H + + +L+ A++ F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+ G D + ++ + E L E + +I + Y ++ +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ A +F ++ + G+ PD + ++I + A + F MK G EP +
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ K +++ ++E + ++ G
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+ ++ + +++ Y I++ K + A N+L+ M++ D VI + ++ K
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
GH A+ F E+ G + +Y MI + G + LL +M REI +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
AL+ A + G A+++ D + I PD +I + + + A+ F+ M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 428
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
P +++ Y + +++ ++ L ++ + G++ L F
Sbjct: 429 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++I+ KHN+ ++A+++ M D V T++ +Y +A +D + EI
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y ++I + + L +EM + + + LL + E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A +F+ IQ++ I D ++I + ++A F ++ G+EP + ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 354 VAYEKESKLNTA 365
+ +S ++ A
Sbjct: 580 SGFCGKSAISDA 591
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ E N+ Y +I+ + +++E +LT M +RG+ D+V T++ Y K G+ +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A E+ G +Y S+I + +AG R L++M R + Y L+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+S+ G A RV + G P +I + + G+ E A E+MK G+ P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+VL + + ++ AL ++ ++GI
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 160 HA-LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
HA +L ++ YT++IH K + A L M+ RG ++ TT+V +S+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G+++ A E+ G +Y ++I + G E ++LE+M + +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
Y +L + R + + A RV + GI PD +I+ + ++++A +E M
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
R G+ P + +++ AY E L AL+ ++ ++G++ ++L K
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N R YT ++ + + EA +L M GF V +++ + G ++ A
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+++ G D SY ++++ + R+ + + EM + I + Y +L++ +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ A +++ + G+ PD+ +I AY M G EKA M G+ P D
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP-DVVT 557
Query: 350 GSVLV-AYEKESKLNTALEFLIDL 372
SVL+ K+S+ A L+ L
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKL 581
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 2/217 (0%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+LE N+ Y +I +C N ++ A + M+ +G + + V T++ Y K
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGN-IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+D + + L G + SY +I R G + +L EM+ R Y
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
L++ Y + GN A + + G+ P +I + AG +A + M+
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G+ P +R +++ + ++ +N A L ++ G
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 80/204 (39%)
Query: 190 AENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMIT 249
AEN+ M + + ++ + AG++D A F+++ G + +Y ++I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 250 AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
Y + + G LL M + + Y ++ R G + V + G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
D+ +IK Y G +A + M R G+ P+ S++ + K +N A+EFL
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 370 IDLEKEGIMVGEEASAILAGWFRK 393
+ G+ E L F +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQ 392
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+++ FE ++ +T++++ YC N++E+A + + GF + V TT++ K
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYC-HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
HL+ A E F ++ G + +Y +++T G LL +M R I +
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
AL+ A+ ++G A+ +++ + + PD G +I M G ++AR F M+R
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
G P + +++ + K ++ ++ ++ ++G++ +L
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +IH K ++E+ I M Q+G + + + T ++ Y G D A+E F ++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
P D R+Y ++ G E+ + E M RE+ Y +++ ++G E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
A +F ++ G+ P+ +I + G +A F+ MK G P +
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 99/224 (44%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+ +++ S ++ Y ++I+ + L+EA + M++ G ++VI TT++H + K+
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
++ + F E+ G + +Y +I Y G P+ + + +M +R Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
LL G E A +F+ ++ + + ++I+ G+ E A F ++
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
G++P +++ + + ++ A ++++G + E
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 72/178 (40%)
Query: 189 EAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMI 248
+A +L M +R + + T ++ + K G L A+E + + + D +YGS+I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 249 TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGII 308
G+ + + M+ Y +Y L+ + + E ++F + G++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 309 PDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
+ ++I+ Y + G+ + A+ F M P R +L K+ AL
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E ++ + +I K +L EAE + M R D V +M++ + K
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D A+ F+ L+ P D ++ ++I Y RA + G LL E+ R + A + Y
Sbjct: 417 FDDAKHMFD---LMASP-DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + N AQ +F + G+ PD C +++ + + E+A FE ++ +
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I+ ++ K SK++ A + L G+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 90/208 (43%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ + II + +++E +L + +RG + + T++H + + +L+ A++ F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+ G D + ++ + E L E + +I + Y ++ +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ A +F ++ + G+ PD + ++I + A + F MK G EP +
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ K +++ ++E + ++ G
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + +++ Y I++ K + A N+L+ M++ D VI + ++ K GH
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A+ F E+ G + +Y MI + G + LL +M REI + A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A + G A+++ D + I PD +I + + + A+ F+ M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--- 428
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
P +++ Y + +++ ++ L ++ + G++ L F
Sbjct: 429 -SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++I+ KHN+ ++A+++ M D V T++ +Y +A +D + EI
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y ++I + + L +EM + + + LL + E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A +F+ IQ++ I D ++I + ++A F ++ G+EP + ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 354 VAYEKESKLNTA 365
+ +S ++ A
Sbjct: 580 SGFCGKSAISDA 591
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 4/217 (1%)
Query: 160 HALLEESFEVNIRD----YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
H+L EE + I ++ C K + L EAE + +K+RGF D L +MV I
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
Y + + +A + ++ G +Y S++ + R+ + E +L E+ A+ I
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
Y ++ AY R A R+F ++ +GI+PD I +Y E+A
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 336 NMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
M + G P S++ Y K ++ + A F+ DL
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I C + + +EA + MK GF D+V ++ +Y K+ A + E+
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
L G +Y S+I+AY R GM + L +M + Y LL + R G E
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A +F+ ++ AG P+ IK YG G+ + F+ + G+ P
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 18/242 (7%)
Query: 114 FSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRD 173
FS +K + LL+ + K +P E + VL E+ + F +I
Sbjct: 310 FSYDKVTYNALLDVYGKSHRP--KEAMKVLNEM----------------VLNGFSPSIVT 351
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++I + L+EA + M ++G D TT++ + +AG ++ A FEE+R
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + ++ + I Y G + +E++ + + LL + + G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
VF ++ AG +P+ + +I AY G E+A + M AG+ P +VL
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 354 VA 355
A
Sbjct: 532 AA 533
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I + ++ G++ E + MK+ GF+ ++ T++ YS+ G ++A +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD--------------------- 268
+ G D +Y +++ A R GM E+ E +L EM+
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 269 ---------AREIYAG-----SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
A E+Y+G + + K L+ S+ A+R F ++ G PD
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
++ YG KA + MK G P+ S++ + + + + E L ++
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 375 EGI 377
+GI
Sbjct: 693 KGI 695
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 36/254 (14%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRG----FICDQVIL------ 209
+ L E+ F +++ YT++I + EA N+ M++ G I VIL
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 210 -------TTMV------------HIYS------KAGHLDR-AEEYFEEIRLLGEPLDKRS 243
T++V + Y+ K G L + A + FEE++ G DK +
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT 316
Query: 244 YGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQ 303
Y +++ Y ++ P+ +L EM Y +L+ AY+R G + A + + +
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 304 LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLN 363
G PD ++ + AG+ E A FE M+ AG +P + + Y K
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 364 TALEFLIDLEKEGI 377
++ ++ G+
Sbjct: 437 EMMKIFDEINVCGL 450
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 207 VILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE 266
V+L T+V + SK L AE F E++ G D + SM++ Y R M + +L+
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 267 MDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
M R Y +L+ +SR + ++ + I GI PD VI AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 327 SEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SA 385
A F M+ +GI P + + +Y +S A+ + + K G + ++
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 386 ILAGW 390
I+ G+
Sbjct: 775 IVDGY 779
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 94/188 (50%)
Query: 158 AEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
A +++++ + + YT +++ K++++++AE I M+ +G D +++ +S
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
K G++ +A F+E+ G + Y ++ + R+G E+ + LL+EM + ++ +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
Y ++ Y + G+ A R+FD ++L G++PD + ++ E+A F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 338 KRAGIEPT 345
K+ T
Sbjct: 759 KKGCASST 766
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
I YC K ++ EA + +M +G + D T +++ K +D AEE F E+R G
Sbjct: 564 INEYC-KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
D SYG +I + + G ++ S+ +EM + +Y LL + R G E A+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 297 RVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
+ D + + G+ P+ +I Y +G +A F+ MK G+ P D + + LV
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLV 739
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 98/217 (45%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E + N Y I + ++ A+ + M++ G + ++V+ T +++ Y K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ A + + G D ++Y ++ + + E + EM + I Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ +S++GN + A +FD + G+ P+ I +++ + +G+ EKA+ + M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+ P +++ Y K L A +++ +G++
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 155 LEVAEHALLE-ESFEVNIRD--YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTT 211
LE A+ L+E +S V++ + Y+ +I K + A+ ++ M G +
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
+ + SK G +++A+ F+ + G ++Y S+I Y R +G LL EM R
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
I Y +++ G+ +GA + + +G P+ I +IK + + A
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 332 IAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ MK GI P C S+++ K +++ A FL+++ + G+
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ +I Y ++I K +++EA + L M + G + + Y +A
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A++Y +E+R G +K +I Y + G S M + I ++ Y L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ + A+ +F ++ GI PD G++I + G +KA F+ M G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
P +L + + ++ A E L ++ +G+
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 93/222 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT +I ++++ +A +L MK++G D +++ SKA +D A +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G + +YG+ I+ YI A + ++EM + + L+ Y +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A + ++ GI+ D K +++ + + A F M+ GI P
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
G ++ + K + A ++ +EG+ +L G F
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 87/220 (39%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ L+ A NI+ M G + VI TT++ + + A +E++
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D Y S+I +A + S L EM + + Y A + Y
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A + ++ G++P+ +C +I Y G+ +A A+ +M GI + ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
K K++ A E ++ +GI + +L F K
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 162 LLEESFE----VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
L++ SF+ N Y +I Y K LE A+ + M+ + + T++++ Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 218 KAGHLDRAEEY--FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE-IYA 274
K G RAE + F+E G D Y +I A+++ GM + L+++M A+ +
Sbjct: 852 KMGR--RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 275 GSEVY----KALLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
G ++ +ALL ++++G E A++V + + IPD
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 12/190 (6%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L+ E+ L+ +SF YT ++ C + N +E A I ++G +
Sbjct: 719 LFDEMKLKGLVPDSFV-----YTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNAL 772
Query: 213 VHIYSKAGHLDRAEEYFEEIR-----LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM 267
++ K G + E + G+P D +Y MI + G E + L +M
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 268 DAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQS 327
+ Y +LL Y ++G VFD AGI PD + ++I A+ G +
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 328 EKARIAFENM 337
KA + + M
Sbjct: 892 TKALVLVDQM 901
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 8/218 (3%)
Query: 166 SFEVNIRDYTNIIHYC--GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
S +NI+ Y C K +E+A+ + M G I +++ Y + ++
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+ E E++ + +YG+++ +G + ++++EM A +Y L+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 284 RAY---SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
+ + SR G+ A RV ++ GI PD +I A + ++AR M
Sbjct: 460 KTFLQNSRFGD---AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
G++P G+ + Y + S+ +A +++ ++ + G++
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 41/249 (16%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++EE N+ Y ++ + ++E+A+ +L M +G + V T++ Y K+G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPER---------------------- 259
L A F+E++L G D Y +++ R ER
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 260 -------GESLLEEMDAREIYAGS---------EVYKALLRAYSRIGNAEGAQRVFDAIQ 303
G++ L+ + GS Y ++ + GN E A+ +F +Q
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 304 LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV-AYEKESKL 362
A ++P ++ Y G+ + F+ AGIEP D + SV++ A+ KE
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP-DHIMYSVIINAFLKEGMT 891
Query: 363 NTALEFLID 371
AL L+D
Sbjct: 892 TKAL-VLVD 899
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 159 EHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
+H + + ++ Y+ +I+ K N+++ A + M +RG I + VI TT++H +S+
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G +D +E ++++ G D Y +++ + + G ++++ M R +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA--GQSEKARIAFEN 336
Y L+ + R G+ E A + + GI D G GM G+ A A
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDR--VGFSALVCGMCKEGRVIDAERALRE 475
Query: 337 MKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
M RAGI+P D ++ A+ K+ T + L +++ +G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 90/199 (45%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L + + +I Y +++ K+ L A NI+ M +RG D++ TT++ + + G
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A E +E+ G LD+ + +++ + G E L EM I Y
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ A+ + G+A+ ++ +Q G +P +++ GQ + A + + M G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 342 IEPTDRCIGSVLVAYEKES 360
+ P D ++L + + +
Sbjct: 551 VVPDDITYNTLLEGHHRHA 569
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F+V IR N++ K N + GF + + +++ + K G++ A+
Sbjct: 201 FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQ 260
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
+ F+EI S+ ++I Y + G + G L +M+ Y AL+ A
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ +GA +FD + G+IP+D I +I + G+ + + +++ M G++P
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ + K L A + + + G+
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L+ F +N+ + +++ K + +A+ + + +R V T+++ Y K G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 222 LD---RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
LD R + E+ R P D +Y ++I A + + L +EM R + +
Sbjct: 291 LDEGFRLKHQMEKSRT--RP-DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
+ L+ +SR G + + + + G+ PD + ++ + G AR + M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAG 389
R G+ P +++ + + + TALE ++++ GI + SA++ G
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +I + +E A I M Q G D+V + +V K G + AE E+
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y M+ A+ + G + G LL+EM + Y LL ++G +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
A + DA+ G++PDD +++ + S K I
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI 576
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 37/256 (14%)
Query: 159 EHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
E LL + + Y +I C ++N +E+A N++ M+Q G+ D V + ++ ++
Sbjct: 185 EAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTR 244
Query: 219 AGHLDRAE--EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPER----------------- 259
+ +D ++EI LD + +I + ++G P +
Sbjct: 245 SNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKT 304
Query: 260 ------------------GESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
E+L EE+ I + Y ALL+ Y + G + A+ +
Sbjct: 305 ATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESK 361
++ G+ PD+ L+I AY AG+ E ARI + M+ ++P +L + +
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 362 LNTALEFLIDLEKEGI 377
+ L +++ G+
Sbjct: 425 WQKTFQVLKEMKSIGV 440
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ E++++ +II K +A +L + G L +++ + +G
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
AE FEE+R G R+Y +++ Y++ G + ES++ EM+ R + Y L+
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
AY G E A+ V ++ + P+ + ++ + G+ +K + MK G++P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ V+ + K + L+ A+ + EGI
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
+II + EAE + ++Q G ++ Y K G L AE E+
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
G D+ +Y +I AY+ AG E +L+EM+A ++ S V+ LL + G +
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
+V ++ G+ PD + +VI +G + A F+ M GIEP DR + L+
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP-DRVTWNTLI 486
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 160 HALLEESFEVNIR--------DYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTT 211
H + EE FE R Y +I+ G + ++ + +L MK +G + + V TT
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
+V +Y K+G + A E EE++ +G Y ++I AY + G+ E+ + M +
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
+ +L+ A+ A V ++ G+ PD ++KA + +K
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Query: 332 IAFENMKRAGIEPTDRCIGSVL 353
+ +E M +G +P DR S+L
Sbjct: 675 VVYEEMIMSGCKP-DRKARSML 695
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 14/281 (4%)
Query: 107 LMRQIICFSAEKGNVSDLLN----AWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHAL 162
L+ II A+ G+ S L A + A +S++ L L E L
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
+ + R Y ++ K L++AE++++ M++RG D+ + ++ Y AG
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGE-----SLLEEMDAREIYAGSE 277
+ A +E+ E D + S + + + AG +RGE +L+EM + + +
Sbjct: 391 ESARIVLKEM----EAGDVQP-NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
Y ++ + + + A FD + GI PD +I + G+ A FE M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 338 KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+R G P ++ +Y + + + L ++ +GI+
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L E E + + +I KH + AE + AM++RG + M++ Y
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D + +++ G + ++ +++ Y ++G LEEM + + S +Y A
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ AY++ G +E A F + G+ P +I A+G + +A + MK G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 342 IEP---TDRCIGSVLVAYEKESKLNTALEFLI 370
++P T + L+ +K K+ E +I
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%)
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI 252
+L MK G D+ ++ + K LD A F+ + G D+ ++ ++I +
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 253 RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
+ G E + E M+ R + Y ++ +Y + +R+ ++ GI+P+
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEK 358
++ YG +G+ A E MK G++P+ +++ AY +
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ N+ ++ +I K +L EAE + M RG D + T+++ + K H
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD+A + + + G + R++ +I Y +A + G L +M R + A + Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L++ + +G A+ +F + + P+ +++ G+SEKA FE ++++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+E ++ SK++ A + L +G+ G + I+ G K
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 4/205 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT--TMVHIYSKAGHLDRAEEYFEE 231
YT++I K N L++A ++ M +G CD I T +++ Y KA +D E F +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKG--CDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 232 IRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGN 291
+ L G D +Y ++I + G + L +EM +R++ YK LL G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 292 AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGS 351
+E A +F+ I+ + + D I ++I A + + A F ++ G++P +
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 352 VLVAYEKESKLNTALEFLIDLEKEG 376
++ K+ L+ A +E++G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E + N Y +++ K Q A +L M++R D V + ++ K G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A F E+ + G + +Y +I + AG + G LL +M R+I +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ ++ + G A+ + + GI PD +I + +KA + M G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+P R ++ Y K ++++ LE + G++
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
+E I M++ D V ++ Y +A + A FEE+ G ++Y +
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
+ A+ +GM E+ +++ + M I+ Y +L AY + EGA++ F I++ G
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
P+ G +IK Y A EK +E M+ +GI+ + +++ A + +AL
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 482
Query: 368 FLIDLEKEGIMVGEEASAIL 387
+ ++E G+ ++A +L
Sbjct: 483 WYKEMESCGVPPDQKAKNVL 502
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAM---KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
Y I+ + ++ +EAE + + K+ DQ + M+++Y KAG+ ++A + F
Sbjct: 219 YQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS 278
Query: 231 EIRLLGEPLDKRSYGSMI---TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+ G P +Y S++ T+Y + + ++M +I Y L++AY
Sbjct: 279 SMVGKGVPQSTVTYNSLMSFETSY------KEVSKIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
R E A VF+ + AG+ P K +++ A+ ++G E+A+ F++M+R I P
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++L AY S + A +F ++ +G
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 161 ALLEESFEVNIRD----YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
++ EE + +R Y ++ +E+A+ + +M++ D TTM+ Y
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 401
Query: 217 SKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS 276
A ++ AE++F+ I++ G + +YG++I Y +A E+ + E+M I A
Sbjct: 402 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 461
Query: 277 EVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
+ ++ A R N A + ++ G+ PD K +++ + E+A+
Sbjct: 462 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 516
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
++ Y K G+ + AE + +G + SY +++ +Y R G E++ M +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAI---QLAGIIPDDKICGLVIKAYGMAGQSE 328
+ Y+ +L+ + + A+ VF+ + + + + PD K+ ++I Y AG E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESK 361
KAR F +M G+ P + L+++E K
Sbjct: 272 KARKVFSSMVGKGV-PQSTVTYNSLMSFETSYK 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 173 DYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
D+ +I GK AE +L+ + + G + + T ++ Y + G + AE F +
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 207
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM---DAREIYAGSEVYKALLRAYSRI 289
+ G +Y ++ ++ + E + E + + ++Y ++ Y +
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
GN E A++VF ++ G+ P + + ++ + + E ++I ++ M+R+ I+P
Sbjct: 268 GNYEKARKVFSSMVGKGV-PQSTVTYNSLMSFETSYK-EVSKI-YDQMQRSDIQPDVVSY 324
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
++ AY + + AL ++ G+ +A IL F
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E NI Y +I + +L EA ++ MK G + + T++ + G L
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+A +++ G +Y +++ + R G +++EM+ R I Y L+
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++R N E A ++ +++ G++PD ++I + + GQ +A F++M E
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
P + ++++ Y KE AL+ L ++E++
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 169 VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+++ + +I C + ++E++ ++L + + GF + VI TT++ K G +++A++
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
F E+ LG ++R+Y +I + G+ ++G + E+M ++ Y ++ +
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G + A +VFD ++ G+ + +I + +A + MK GI P
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL-AGWFRK 393
+++ + KL AL DL+ G+ IL +G+ RK
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 101/232 (43%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L E F N+ YT +I C K ++E+A+++ M + G + ++ T +++ K G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ E +E+++ G + +Y ++ + G + + +EM R + Y
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ R A +V D ++ GI P+ +I + G+ KA ++K G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+ P+ ++ + ++ + A + + ++E+ GI + IL F +
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +I + + +E+A + +M++ G + D + ++H + G ++ A F+ +
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
++ Y +MI Y + G R LL+EM+ +E+ Y+ ++ + ++
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKA 320
A+R+ + + +GI P I L+ +A
Sbjct: 531 EAERLVEKMIDSGIDPSTSILSLISRA 557
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 158 AEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQ---RGFICDQVILTTMVH 214
E LL + F + R YT ++ K+ ++ + +L AM++ R D+V TT+V
Sbjct: 401 GEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM--DAREI 272
+ AG +DRA + E+ +G P ++ +Y ++ Y + +R E LL EM DA I
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA-GI 519
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
Y ++ I ++ GA F+ ++ GI P ++KA+ M+GQ + A
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 333 AFENM 337
F+ M
Sbjct: 580 VFDEM 584
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 202 FICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGE----PLDKRSYGSMITAYIRAGMP 257
F D I TT++ Y K G + E +R + P D+ +Y ++++A++ AG+
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHP-DEVTYTTVVSAFVNAGLM 468
Query: 258 ERGESLLEEMDAREIYAGSEVYKALLRAYSR---IGNAEGAQRVFDAIQLAGIIPDDKIC 314
+R +L EM + A Y LL+ Y + I AE R + + AGI PD
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLR--EMTEDAGIEPDVVSY 526
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
++I + S A F M+ GI PT +++ A+
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y II K +L+ A + MK+R + +++V KAG LD + + + E++
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + S+I +Y +AG + L +EM +Y ++ ++++ G E
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A VF ++ AG +P +++ + +GQ + A + +M AG+ P S+L
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
+ ++ A + L++++ G V AS +L
Sbjct: 496 TLLANKRLVDVAGKILLEMKAMGYSVDVCASDVL 529
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
+++ Y +I Y K +LE A ++ G D ++ ++ G +A E
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+E + LD +Y +I + ++G + L ++M R++ V+ +L+ +
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ G + + +V+ +Q G P + +I +Y AG+ + A ++ MK++G P
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
++ ++ K KL A+ D+EK G +
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I+ K ++E+ + M QRG + + V T++ + +AG +D+A+E+F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
++ G D +Y ++ G E+ + E+M RE+ Y ++R +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
G E A +F ++ L G+ PD ++ G + + MK+ G+ D
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 98/216 (45%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++++ N+ Y+ ++ K+ ++ EA+ + M + D V +++++
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D A + F+ + G D SY ++I + +A E G L EM R + + + Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L++ + + G+ + AQ F + GI PD +++ G+ EKA + FE+M++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++ +V+ K K+ A L +G+
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 171 IRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
I+ ++++IH + +++A+ +L M +G + +VH SK G LD A+E +
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 231 EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
+ G D +Y +I+ Y + GM + + +L E + Y AL+R Y +I
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGM-AGQSEKARIAFENMKRAGI 342
+ A ++ + + G+ P+ +I+++ + A EKA + FE MK+ G+
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
+E I M++ D V ++ Y +A + A FEE+ G ++Y +
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
+ A+ +GM E+ +++ + M I+ Y +L AY + EGA++ F I++ G
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
P+ G +IK Y A EK +E M+ +GI+ + +++ A + +AL
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 368 FLIDLEKEGIMVGEEASAIL 387
+ ++E G+ ++A +L
Sbjct: 476 WYKEMESCGVPPDQKAKNVL 495
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAM---KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
Y I+ + ++ +EAE + + K+ DQ + M+++Y KAG+ ++A + F
Sbjct: 212 YQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS 271
Query: 231 EIRLLGEPLDKRSYGSMI---TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+ G P +Y S++ T+Y + ++M +I Y L++AY
Sbjct: 272 SMVGKGVPQSTVTYNSLMSFETSYKEVS------KIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
R E A VF+ + AG+ P K +++ A+ ++G E+A+ F++M+R I P
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++L AY S + A +F ++ +G
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 161 ALLEESFEVNIRD----YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
++ EE + +R Y ++ +E+A+ + +M++ D TTM+ Y
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 394
Query: 217 SKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS 276
A ++ AE++F+ I++ G + +YG++I Y +A E+ + E+M I A
Sbjct: 395 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 454
Query: 277 EVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
+ ++ A R N A + ++ G+ PD K +++ + E+A+
Sbjct: 455 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 509
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
++ Y K G+ + AE + +G + SY +++ +Y R G E++ M +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAI---QLAGIIPDDKICGLVIKAYGMAGQSE 328
+ Y+ +L+ + + A+ VF+ + + + + PD K+ ++I Y AG E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESK 361
KAR F +M G+ P + L+++E K
Sbjct: 265 KARKVFSSMVGKGV-PQSTVTYNSLMSFETSYK 296
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 173 DYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
D+ +I GK AE +L+ + + G + + T ++ Y + G + AE F +
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 200
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM---DAREIYAGSEVYKALLRAYSRI 289
+ G +Y ++ ++ + E + E + + ++Y ++ Y +
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
GN E A++VF ++ G+ P + + ++ + + E ++I ++ M+R+ I+P
Sbjct: 261 GNYEKARKVFSSMVGKGV-PQSTVTYNSLMSFETSYK-EVSKI-YDQMQRSDIQPDVVSY 317
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
++ AY + + AL ++ G+ +A IL F
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR----- 224
N+ Y +IH+ + +++EA ++L M+ +G+ D + +T+V+ Y + G LD+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 225 ------------------------------AEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254
AEE F E+ G D Y ++I + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 255 GMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
G EM +R+I Y A++ + +IG+ A ++F + G+ PD
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
+I Y AG + A +M +AG P +++ KE L++A E L ++ K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 375 EGI 377
G+
Sbjct: 485 IGL 487
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 2/219 (0%)
Query: 160 HALLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
H + + E + +T +I+ YC K +++A + M Q G + V TT++ K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYC-KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G LD A E E+ +G + +Y S++ ++G E L+ E +A + A +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
Y L+ AY + G + AQ + + G+ P +++ + + G E M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
GI P S++ Y + L A D+ G+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +II + +L EAE + M ++G + D V+ TT++ + K G + A ++F E+
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 234 LLGEPLDKRSYGSMITAYIRAG-MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
D +Y ++I+ + + G M E G+ L EM + + S + L+ Y + G+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
+ A RV + + AG P+ +I G + A M + G++P S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 353 LVAYEKESKLNTALEFLIDLEKEGI 377
+ K + A++ + + E G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGL 522
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR----- 224
N+ Y +IH+ + +++EA ++L M+ +G+ D + +T+V+ Y + G LD+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 225 ------------------------------AEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254
AEE F E+ G D Y ++I + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 255 GMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
G EM +R+I Y A++ + +IG+ A ++F + G+ PD
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
+I Y AG + A +M +AG P +++ KE L++A E L ++ K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 375 EGI 377
G+
Sbjct: 485 IGL 487
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 2/219 (0%)
Query: 160 HALLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
H + + E + +T +I+ YC K +++A + M Q G + V TT++ K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYC-KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G LD A E E+ +G + +Y S++ ++G E L+ E +A + A +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
Y L+ AY + G + AQ + + G+ P +++ + + G E M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
GI P S++ Y + L A D+ G+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +II + +L EAE + M ++G + D V+ TT++ + K G + A ++F E+
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 234 LLGEPLDKRSYGSMITAYIRAG-MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
D +Y ++I+ + + G M E G+ L EM + + S + L+ Y + G+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGK-LFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
+ A RV + + AG P+ +I G + A M + G++P S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 353 LVAYEKESKLNTALEFLIDLEKEGI 377
+ K + A++ + + E G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGL 522
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I C +L+EA L M +RG D + ++ ++ A +++++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y MI +A E G+ +EM ++ + + VY L+RAY R G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
A + + ++ GI P+ +IK + + E+A++ FE M+ G+EP
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 173 DYTNIIHYCG--KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
+YT I CG N++EEA K+ G + D + M+ KA + +E+F+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 231 EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
E+ + Y +I AY R+G L E+M + I S Y +L++ S I
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
E A+ +F+ +++ G+ P+ +I YG GQ K M + P
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 351 SVLVAYEKESKLNTALEFLIDLEKEGIM 378
++ Y ++ + A L ++ ++GI+
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
T +I KH + +A + +GF+ D ++H +AG LD A +EI
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
G +D+ SY ++I+ + L+EM R + + Y L+ + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
A + +D + G++PD ++I A ++E+ + F+ M ++P ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 355 AYEKESKLNTALEFLIDLEKEGI 377
AY + +L+ ALE D++ +GI
Sbjct: 654 AYCRSGRLSMALELREDMKHKGI 676
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ ++ + N Y ++I + +L A + MK +G + T+++ S
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A+ FEE+R+ G + Y ++I Y + G + E LL EM ++ ++ Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
++ Y+R GN A R+ + ++ GI+PD
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 84/216 (38%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L + F V+ R ++H + +L+EA I + RG + D+V T++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A + +E+ G D +Y +I E ++ + Y
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + E Q FD + + P+ + +I+AY +G+ A E+MK G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I P S++ S++ A ++ EG+
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I C +L+EA L M +RG D + ++ ++ A +++++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y MI +A E G+ +EM ++ + + VY L+RAY R G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
A + + ++ GI P+ +IK + + E+A++ FE M+ G+EP
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 173 DYTNIIHYCG--KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
+YT I CG N++EEA K+ G + D + M+ KA + +E+F+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 231 EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
E+ + Y +I AY R+G L E+M + I S Y +L++ S I
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
E A+ +F+ +++ G+ P+ +I YG GQ K M + P
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 351 SVLVAYEKESKLNTALEFLIDLEKEGIM 378
++ Y ++ + A L ++ ++GI+
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
T +I KH + +A + +GF+ D ++H +AG LD A +EI
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
G +D+ SY ++I+ + L+EM R + + Y L+ + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
A + +D + G++PD ++I A ++E+ + F+ M ++P ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 355 AYEKESKLNTALEFLIDLEKEGI 377
AY + +L+ ALE D++ +GI
Sbjct: 654 AYCRSGRLSMALELREDMKHKGI 676
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ ++ + N Y ++I + +L A + MK +G + T+++ S
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A+ FEE+R+ G + Y ++I Y + G + E LL EM ++ ++ Y
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
++ Y+R GN A R+ + ++ GI+PD
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 84/216 (38%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L + F V+ R ++H + +L+EA I + RG + D+V T++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A + +E+ G D +Y +I E ++ + Y
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + E Q FD + + P+ + +I+AY +G+ A E+MK G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I P S++ S++ A ++ EG+
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L + F ++ + +I++ + L A +IL M Q G + + ++H + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+DRA EY E + G D +Y +M+TA + G E +L ++ ++ Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ ++ G A ++ D ++ + PD ++ G+ ++A F +R G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
I P S+++ K + + A++FL+ + G E + IL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%)
Query: 189 EAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMI 248
+AE +L M ++GF V +++ + G L RA + E++ G + SY ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 249 TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGII 308
+ + +R LE M +R Y Y +L A + G E A + + + G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 309 PDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
P VI AG++ KA + M+ ++P S++ +E K++ A++F
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 369 LIDLEKEGI 377
+ E+ GI
Sbjct: 507 FHEFERMGI 515
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
+ N Y ++H K +++ A L M RG D V TM+ K G ++ A E
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
++ G +Y ++I +AG + LL+EM A+++ + Y +L+ S
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
R G + A + F + GI P+ ++ + Q+++A M G +P +
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAI 386
++ E ALE L +L +G+M A +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 158 AEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
++ + SF + + N + + +LEE L M G + D + TT++ +
Sbjct: 89 GHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFC 148
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
+ G +A + E + G D +Y MI+ Y +AG S+L+ M +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVV 205
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
Y +LR+ G + A V D + PD ++I+A A + M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 338 KRAGIEPTDRCIGSVLV-AYEKESKLNTALEFLIDLEKEG 376
+ G P D +VLV KE +L+ A++FL D+ G
Sbjct: 266 RDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
LL +++ + Y +I K ++A ++ M+ RGFI D V +++H Y
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 727
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
H+ +A + + G + +Y ++I AG+ + + L EM +R + Y
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
AL+ ++IGN +G+ ++ + G++P ++I + G+ +AR + M +
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 341 GIEP 344
G+ P
Sbjct: 848 GVSP 851
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 95/218 (43%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E S N YT ++ K N A + + M RG D V+ T ++ KAG L
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 346
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
AE+ F+ + + + +Y +++ +AG E ++ +M + + Y +++
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
Y + G E A + ++ ++P+ G VI AG+ E A + M+ G+E
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
+ + +++ ++ ++ + D+ +G+ + +
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 15/275 (5%)
Query: 124 LLNAWVKIMKPIRAEWL-SVLKELETMEHPLYL---------EVAEHALLEESFEVNIRD 173
L++ + K+ +RA+ L + EL + H + L E A ++ F+ ++
Sbjct: 202 LIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+++II+ K ++ E +L M++ + V TT+V KA A + ++
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ G P+D Y ++ +AG E + + Y AL+ + G+
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+ + + +IP+ +I Y G E+A M+ + P G+V+
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVG-EEASAIL 387
K K A+E L KE ++G EE + IL
Sbjct: 442 DGLFKAGKEEMAIE----LSKEMRLIGVEENNYIL 472
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
LLE++ N+ YT ++ K L AE I+T M ++ I + V ++M++ Y K G
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ A ++ + +YG++I +AG E L +EM + + + A
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ RIG + + + + G+ D +I + G E A E M+ G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 342 IEPTDRCIGSVLVA 355
+ P D +VL++
Sbjct: 535 M-PWDVVSYNVLIS 547
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 36/268 (13%)
Query: 114 FSAEKGNVSDLLNAWVKIMKPIRAE--WLSVLKELETMEHPLYLEVAEHALLEES----- 166
F+ + LLN W ++ I A W ++ +H L ++ H ++ E
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI------DHGLKPDIVAHNVMLEGLLRSM 346
Query: 167 --------FEV--------NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT 210
F V N+R YT +I K + +E A M G D + T
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 211 TMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR 270
++ + LD E +E++ G P D ++Y ++I MPE G + +M
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 271 EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
EI + ++++Y N E + V+D + GI PDD ++I+ G+S +A
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 331 RIAFENMKRAGIEPTDRCIGSVLVAYEK 358
E M D+ + + L+ Y K
Sbjct: 527 CRYLEEM-------LDKGMKTPLIDYNK 547
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 163 LEESFEVNIRDYTNIIH-YCGKHNQLEEA----------------------ENILTAMKQ 199
L+E F N+ YT +++ +C N +E A E +L +MK+
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 200 RGFI-----------CDQV-ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
I C V T M+ + K ++ A EYF+++ G D Y +
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
IT + + LL+EM + + Y AL++ + E R+++ + I
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
P +++K+Y +A E R ++ M + GI P D ++ E K A
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 528
Query: 368 FLIDLEKEGI 377
+L ++ +G+
Sbjct: 529 YLEEMLDKGM 538
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 36/268 (13%)
Query: 114 FSAEKGNVSDLLNAWVKIMKPIRAE--WLSVLKELETMEHPLYLEVAEHALLEES----- 166
F+ + LLN W ++ I A W ++ +H L ++ H ++ E
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI------DHGLKPDIVAHNVMLEGLLRSM 347
Query: 167 --------FEV--------NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT 210
F V N+R YT +I K + +E A M G D + T
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 211 TMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR 270
++ + LD E +E++ G P D ++Y ++I MPE G + +M
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 271 EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
EI + ++++Y N E + V+D + GI PDD ++I+ G+S +A
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 331 RIAFENMKRAGIEPTDRCIGSVLVAYEK 358
E M D+ + + L+ Y K
Sbjct: 528 CRYLEEM-------LDKGMKTPLIDYNK 548
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 163 LEESFEVNIRDYTNIIH-YCGKHNQLEEA----------------------ENILTAMKQ 199
L+E F N+ YT +++ +C N +E A E +L +MK+
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 200 RGFI-----------CDQV-ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
I C V T M+ + K ++ A EYF+++ G D Y +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
IT + + LL+EM + + Y AL++ + E R+++ + I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
P +++K+Y +A E R ++ M + GI P D ++ E K A
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 529
Query: 368 FLIDLEKEGI 377
+L ++ +G+
Sbjct: 530 YLEEMLDKGM 539
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 170 NIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
++ YT++I YC K ++ EA ++L M + G V +V Y+KAG + AEE
Sbjct: 276 DVVTYTSMISGYC-KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
++ G D ++ S+I Y R G +G L EEM+AR ++ + Y L+ A
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
A+ + + IIP + VI + AG+ +A + E M++ +P D+
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP-DKI 453
Query: 349 IGSVLV 354
++L+
Sbjct: 454 TFTILI 459
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 188 EEAENILTAMKQRGFICDQVILT--TMVHIYSKAGHLDRAEEYFEEIRL--LGEPLDKRS 243
E+A +L M GF C+ I+T T++ + K+ L++A E F++++ + P D +
Sbjct: 223 EKALELLGVMS--GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP-DVVT 279
Query: 244 YGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQ 303
Y SMI+ Y +AG SLL++M IY + + L+ Y++ G A+ + +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 304 LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLN 363
G PD +I Y GQ + +E M G+ P ++ A E++L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 364 TALEFLIDLEKEGIM 378
A E L L + I+
Sbjct: 400 KARELLGQLASKDII 414
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC--DQVILTTMVHIYSKAGHLDRA 225
E +I Y +I K N+L +A + +K G +C D V T+M+ Y KAG + A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
+++ LG ++ ++ Y +AG E + +M + + + +L+
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
Y R+G R+++ + G+ P+ ++I A + KAR + I P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 346 DRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
V+ + K K+N A + ++EK+
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 170 NIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
++ YT++I YC K ++ EA ++L M + G V +V Y+KAG + AEE
Sbjct: 276 DVVTYTSMISGYC-KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
++ G D ++ S+I Y R G +G L EEM+AR ++ + Y L+ A
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
A+ + + IIP + VI + AG+ +A + E M++ +P D+
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP-DKI 453
Query: 349 IGSVLV 354
++L+
Sbjct: 454 TFTILI 459
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 188 EEAENILTAMKQRGFICDQVILT--TMVHIYSKAGHLDRAEEYFEEIRL--LGEPLDKRS 243
E+A +L M GF C+ I+T T++ + K+ L++A E F++++ + P D +
Sbjct: 223 EKALELLGVMS--GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP-DVVT 279
Query: 244 YGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQ 303
Y SMI+ Y +AG SLL++M IY + + L+ Y++ G A+ + +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 304 LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLN 363
G PD +I Y GQ + +E M G+ P ++ A E++L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 364 TALEFLIDLEKEGIM 378
A E L L + I+
Sbjct: 400 KARELLGQLASKDII 414
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC--DQVILTTMVHIYSKAGHLDRA 225
E +I Y +I K N+L +A + +K G +C D V T+M+ Y KAG + A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
+++ LG ++ ++ Y +AG E + +M + + + +L+
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
Y R+G R+++ + G+ P+ ++I A + KAR + I P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 346 DRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
V+ + K K+N A + ++EK+
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I K+ ++EE + M QRG + + V ++ +AG D A+E F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+ G P + +Y +++ + G E+ + E + ++ Y ++ +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E +F + L G+ PD +I + G E+A F+ MK G P C
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ A ++ + E + ++ G
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + NI Y ++ K+ +LE+A + +++ M+ KAG
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ + F + L G D +Y +MI+ + R G E ++L +EM S Y
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV 317
L+RA R G+ E + + ++ G D GLV
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 3/221 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +++ K + A N+L M+Q +I T++ K H+D A F+E+
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y S+I+ G LL +M R+I + AL+ A+ + G
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A++++D + I P +I + M + ++A+ FE M P +++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEAS--AILAGWFR 392
+ K ++ +E ++ + G +VG + ++ G F+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYNILIQGLFQ 443
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 177 IIHYCGKHNQLEEAENILTAM-KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL 235
I+H K ++E+A N + M Q GF DQ T+V+ KAGH+ A E + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 236 GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
G D +Y S+I+ + G + +L++M R+ + Y L+ + E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+ + GI+PD +I+ + A FE M+ G EP + ++ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 356 YEKESKLNTALEFLIDLEKEG 376
+ KL+ AL L +E G
Sbjct: 445 LCSKGKLDEALNMLKQMELSG 465
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 1/205 (0%)
Query: 190 AENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMIT 249
A + M+ +G D+ ++ G LD A +++ L G +Y ++I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 250 AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
+ +A E + +EM+ + S Y L+ + E A ++ D + + G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
D ++ + G +KA + M G EP G+++ K ++ A + L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 370 IDLEKEGIMVGEEA-SAILAGWFRK 393
++ +GI + A + ++ G FRK
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRK 623
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I +L+EA N+L M+ G + T++ + KA AEE F+E+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ G + +Y ++I ++ E L+++M Y +LL + R G+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A + A+ G PD G +I AG+ E A +++ GI T V+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 354 VAYEKESKLNTALEFL 369
++ K A+
Sbjct: 618 QGLFRKRKTTEAINLF 633
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ + +I + +QL A +L M G + D+ TT++ Y + G LD A
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE-IYAGSEVYKALLRAYSR 288
E++ G S ++ + + G E + ++EM ++ + + L+ +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G+ + A + D + G PD VI G+ ++A + M P
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+++ KE+++ A E L +GI+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGIL 397
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + F + Y+ +++Y +++E A + MK+ G + D T MV + KAG
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+++A ++F E+R +G + +Y ++I AY++A L E M + Y A
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKI----------------CGLVIKAYGMAG 325
L+ + + G E A ++F+ + + +PD + G ++ + +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 326 QSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ E+AR + M G EP +++ K KL+ A E ++ + G
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
++N+ +T + GK+ E+A +++ M +GFI D + +++ A ++ A
Sbjct: 448 KINVSSFTRCLCSAGKY---EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV--YKALLRA 285
FEE++ G D +Y M+ ++ +AG+ E+ EM RE+ V Y AL+ A
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHA 562
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
Y + A +F+ + G +P+ +I + AGQ EKA FE M
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y ++ K +++EEA +L AM G +Q++ ++ K G LD A+E
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G P +Y S+I Y + + +L +M +Y ++ ++
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
G + A ++ ++ G P+ +I +GM G+ E E M G+ P
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ F Y ++I+ GK + E A + +K+ + M+ + K G L
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A + F E++ G D +Y ++++ ++AGM SLL +M+ A + +L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++R G A +F+ I+ +GI PD ++ + AG E+A MK G E
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 344 PTDRCIGSVLVA 355
S+L A
Sbjct: 617 YDAITYSSILDA 628
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 208 ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM 267
+L+ +V +A + +A F + + +Y S+I ++ G E+ + EM
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 268 -DAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
+ + + + Y AL+ +Y ++G + A R+FD ++ + P +KI ++ Y G+
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 327 SEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
EKA FE MKRAG PT ++ K +++ A F D+ ++G+
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
+ ++ G+ + +A ++ K R +++ + + G ++ E + E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 235 LGEPL-DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G+ D +Y ++I++Y + G + L +EM + ++Y LL Y ++G E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A +F+ ++ AG P +IK G AG+ ++A +++M R G+ P
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 1/198 (0%)
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPL 239
YC K N++E+A +L M ++GF ++++ KA + A E F+E++ +
Sbjct: 419 YC-KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 240 DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
R Y MI + + G L EM + Y AL+ + G A +
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
++ G D +++ + G +A FE +K +GI+P ++L +
Sbjct: 538 RKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 360 SKLNTALEFLIDLEKEGI 377
A + +++ +G
Sbjct: 598 GMFEEAARMMREMKDKGF 615
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 6/291 (2%)
Query: 89 QNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSV-LKELE 147
+N +S P +++ KAL R + A +S A + KP + + SV L ++
Sbjct: 154 RNTYVSVSPAVLSELVKALGRAKMVSKA----LSVFYQAKGRKCKPTSSTYNSVILMLMQ 209
Query: 148 TMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQV 207
+H EV E + Y+ +I K + + A + MK +
Sbjct: 210 EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269
Query: 208 ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM 267
I TT++ IY K G +++A + FEE++ G +Y +I +AG + ++M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 268 DAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKA-YGMAGQ 326
+ L+ ++G E VF + + P VIKA +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 327 SEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ F+ MK + P++ ++ Y K +++ AL L +++++G
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 163 LEESF-EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L+E+F V+ R Y +I + GK +L EA ++ MK +G D ++ KAG
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A ++ G D S+ ++ + R G+P R + E + I Y
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 282 LLRAYSRIGNAEGAQRV----------FDAIQLAGII 308
LL ++ G E A R+ +DAI + I+
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 93/204 (45%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT ++ K+ ++ +AE + M++RG D + T+++ + G++ RA F+E+
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G +YG++I + G E L+ EM ++ + V+ L+ Y R G +
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A ++D ++ G D C + + + ++A+ M G++ + +++
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLI 476
Query: 354 VAYEKESKLNTALEFLIDLEKEGI 377
Y KE + A +++ +G+
Sbjct: 477 DVYCKEGNVEEAKRLFVEMSSKGV 500
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y II+ K E +L MK+ G + ++V T ++ + K G + AE+ F+E+R
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D Y S+I+ R G +R L +E+ + + S Y AL+ ++G
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+ + + +Q G+ + +I Y G ++A + ++ M++ G + ++
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 354 VAYEKESKLNTALEFLIDLEKEGI 377
+ + + + A ++L + + G+
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
T I YC K ++EA I M+Q+GF D T+ +++ D A+++ +
Sbjct: 404 TLIDGYCRK-GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
G L SY ++I Y + G E + L EM ++ + + Y ++ AY + G +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
A+++ ++ G+ PD +I +A ++A F M G++ ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 355 AYEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
K K + A +++++G + + L G
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
++ F+ ++ I + + +EA+ L M + G V T ++ +Y K G+++
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A+ F E+ G + +Y MI AY + G + L M+A + S Y +L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
N + A R+F + L G+ + ++I AG+S++A ++ MKR G
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L+ E+ E L S+ Y +I K ++ AE ++ M+ +G QV+ T+
Sbjct: 351 LFDELTEKGLSPSSYT-----YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ Y + G +D A ++ + G D + ++ + + R + + L M +
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
+ Y L+ Y + GN E A+R+F + G+ P+ ++I AY G+ ++AR
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 333 AFENMKRAGIEP 344
NM+ G++P
Sbjct: 526 LRANMEANGMDP 537
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 96/232 (41%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ ++ + T ++ + ++E+++ ++ +G + T+++ Y K
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
E + ++ G +K +Y ++ ++ G E L +EM R I + VY +
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ R GN + A +FD + G+ P G +I G+ A I M+ G
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+ T +++ Y ++ ++ A +E++G +A F +
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E +++ YTN+I K +EEA+ + M +G + + M++ Y K G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ A + + G D +Y S+I A + L EM + + S Y
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKI 313
++ S+ G ++ A ++D ++ G D+K+
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 88/214 (41%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E E ++ YT++I + + ++ A + + ++G ++ K G +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
AE E++ G + + + ++I Y R GM + + + M+ + A +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++R+ + A++ + G+ +I Y G E+A+ F M G++
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
P ++ AY K+ K+ A + ++E G+
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F + R Y+ +IH K E + +MK++G + D ++ + K G +++A
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
+ EE++ G +YGS+I + + L EE ++ I +Y +L+ +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
++G + A + + + G+ P+ ++ A A + +A + F++MK P
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G ++ K K N A F +++K+G+
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 100/247 (40%), Gaps = 1/247 (0%)
Query: 132 MKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAE 191
+P + + +++ + H + + E +E + +T +I K +++ A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 192 NILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAY 251
++L MK D V+ + + K G +D A ++F EI G D+ +Y SMI
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
+A + + E ++ + Y ++ Y G + A + + + G IP
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 312 KICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLID 371
++ G+ ++A FE MK+ P ++ + KL+TA E
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 372 LEKEGIM 378
++K G+
Sbjct: 403 MQKAGLF 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 87/189 (46%)
Query: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
C K N+L E +++ M++ F TT++ +S H D F++++ LG
Sbjct: 143 CVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPT 202
Query: 241 KRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300
+ ++I + + G + SLL+EM + + A +Y + ++ ++G + A + F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 301 AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKES 360
I+ G+ PD+ +I A + ++A FE++++ P ++++ Y
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 361 KLNTALEFL 369
K + A L
Sbjct: 323 KFDEAYSLL 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 161 ALLEE----SFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
+LL+E S + +I Y I GK +++ A ++ G D+V T+M+ +
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 217 SKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS 276
KA LD A E FE + +Y +MI Y AG + SLLE A+
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 277 EVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFEN 336
Y +L ++G + A +VF+ ++ P+ ++I AG+ + A ++
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 337 MKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
M++AG+ P R + ++ K KL+ A
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K + E+ + +K R F+ D + ++H KAG + E F ++ G LD R
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+Y +I + + G + LLEEM + Y +++ ++I + A +F+
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
+ I + I +I +G G+ ++A + E + + G+ P S+L A K ++
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 363 NTAL 366
N AL
Sbjct: 709 NEAL 712
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L+ N YT++I H + E+ I M + D +L T + KAG
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ FEEI+ D RSY +I I+AG L M + + Y
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + + G A ++ + ++ G P G VI + ++A + FE K
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
IE S++ + K +++ A L +L ++G+
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I + +L+ A + +M++ G + + MV K+ LD A F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
EE+ D+ ++ S+I + G + + E+M + S VY +L++ +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E +++ + PD ++ + AG+ EK R FE +K P R
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
++ K N E ++++G ++ A I+ F K
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 160 HALLEES----FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
+ L EE+ E+N+ Y+++I GK +++EA IL + Q+G + +++
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
KA ++ A F+ ++ L ++ +YG +I + + +EM + +
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
+ Y ++ ++ GN A +FD + G +PD +I+ ++ A FE
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 336 NMKRAGI 342
+R G+
Sbjct: 822 ETRRRGL 828
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+++ E+ ++ R Y +I K ++ +A +L MK +GF V +++ +K
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
LD A FEE + L+ Y S+I + + G + +LEE+ + + +
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
+LL A + A F +++ P+ G++I + KA + ++ M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 340 AGIEPT 345
G++P+
Sbjct: 756 QGMKPS 761
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 90/232 (38%), Gaps = 4/232 (1%)
Query: 160 HALLEE----SFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
+ LLEE FE + Y ++I K ++L+EA + K + + VI ++++
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
+ K G +D A EE+ G + ++ S++ A ++A + M +
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
Y L+ ++ A + +Q G+ P +I AG +A F+
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 336 NMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
K G P C +++ ++ A + + G+ + + +L
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 110/267 (41%), Gaps = 36/267 (13%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L+ ++ + +IH CG H L EAE++L M+++G D ++ +++ AG
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A EY+ +IR +G D ++ +++ + M E+++ EMD I
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV------------------------ 317
+++ Y G A+ +F+ QL ++ + ++
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 318 -----------IKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
IKAYG A EKA F+ MK G P + S+ ++ A
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 367 EFLIDLEKEGIMVG-EEASAILAGWFR 392
L ++ G G + +A++A + R
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVR 597
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
T++ +Y KAG L+ A F E+ G P+D ++ +MI G ESLL++M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
+ I ++ Y LL ++ G+ E A + I+ G+ PD
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD 409
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 203 ICDQVILTTMVHIYSKAGHLDRAEEYFEEIR-LLGEPLDKRSYGSMITAYIRAGMPERGE 261
+ L ++ +Y++ G AE F R + G+ D Y MI AY +A + E+
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 262 SLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAY 321
SL + M + + Y +L + + + + AQR+ + +G P K +I +Y
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 322 GMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G A +E M++ G++P + GS++ + + + A+++ +E+ G+
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D + M+ Y KA ++A F+ ++ G D+ +Y S+ + + + +L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA 324
EM G + Y A++ +Y R+G A +++A++ G+ P++ + G +I + +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 325 GQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEK 358
G E+A F M+ G++ + S++ AY K
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ + ++EA+ IL M G M+ Y + G L A + +E +
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G ++ YGS+I + +GM E M+ + + V +L++AYS++G E
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+RV+D ++ + PD ++ G +A F ++ G +++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDV-ISFATMM 731
Query: 354 VAYEKESKLNTALEFLIDLEKEGIM 378
Y+ L+ A+E ++ + G++
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLL 756
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 15/287 (5%)
Query: 116 AEKGNVSDLLNAWVKI----MKPIRAEWLSVLKELETMEHP-LYLEVAEHALLEESFEV- 169
+E GN+ D + A +K+ + P + + +++K P E+ + L E + +V
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 170 -NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
NIR + ++ K ++EEA ++ M++ G D V T+ Y + G RAE
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 229 FEEIRLLGEPL--DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
E ++ E + R+ G ++ Y R G G + M + A V+ +L+ +
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ + +G V ++ + D V+ A+ AG EKA F+ M +AG++P
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 347 RCIGSVLVAY---EKESKLNTALEFLIDLEKEGIMVGEEASAILAGW 390
+ Y ++ K LE LI + +++ + +++GW
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVI---FTTVISGW 409
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 191 ENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITA 250
+ +LT MK+ D + +T+++ +S AG++++A + F+E+ G D +Y +
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374
Query: 251 YIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
Y+RA P++ E LLE + E ++ ++ + G+ + A RVF+ + G+ P+
Sbjct: 375 YVRAKEPKKAEELLETLIV-ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 311 DKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
K ++ Y Q KA + M+ G++P +
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 469
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 170 NIRDYTNIIHYCGKHNQ--LEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
N Y ++ K N +E E L M+ GF D+ LT ++ +Y G +RA
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
F EI G LD+ ++ ++ + G ++ L+E ++ R+I + Y L+ +
Sbjct: 236 VFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFV 294
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ + A ++F+ ++ G+ D + ++I E A + +KR+GI P
Sbjct: 295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRG 354
Query: 348 CIGSVLVAYEKESKLNTALEFLI-DLEKEGIMV 379
+G +L ++ +ES+L+ E +I D++K+ +M+
Sbjct: 355 ILGKLLCSFSEESELSRITEVIIGDIDKKSVML 387
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I G + L EA I M+Q G + V + T++ S++ +
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G L+ +Y S I +YI A E+ +L + M +++ A S + L+ R+
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
A ++ I ++ V+ AY GQ +A F MK AG EP
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
S+L AY K A E +++E GI A + L F K
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 3/211 (1%)
Query: 176 NIIHYC-GKHNQLEEAENILTAMKQRGFIC--DQVILTTMVHIYSKAGHLDRAEEYFEEI 232
NII YC K Q +A ++ +M+++ C D V T+++H+YS G ++ FE +
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
G + SY +++ AY GM S+L ++ I Y LL +Y R
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
A+ VF ++ P+ +I AYG G +A F M++ GI+P + ++
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 353 LVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
L A + K L + GI + A
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 132 MKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAE 191
+KP ++L + + ++ A +N Y + I +LE+A
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 192 NILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAY 251
+ +M+++ D V T ++ + A Y +E+ L PL K Y S++ AY
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
+ G ES+ +M Y ++L AY+ A +F ++ GI PD
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 312 KICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF--L 369
C +++A+ GQ + + M+ I T G+V +E S NT E+
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT----GAVF--FEIFSACNTLQEWKRA 557
Query: 370 IDL 372
IDL
Sbjct: 558 IDL 560
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 2/204 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y N+I+ CG EA + M G D V ++ Y +A YFE ++
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV--YKALLRAYSRIGN 291
D ++ +I + G + L M + +V + +++ YS G
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Query: 292 AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGS 351
E + VF+A+ G+ P+ ++ AY + G S A ++K+ GI P
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 352 VLVAYEKESKLNTALEFLIDLEKE 375
+L +Y + + A E + + KE
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKE 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%)
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
Q+ + I M+ ++++ +D+A F E++ D +Y ++I A+ RAG
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVI 318
+L+++M I Y L+ A GN A V + G+ PD +V+
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 123
Query: 319 KAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
AY Q KA FE MK A + P ++ K + + AL+
Sbjct: 124 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 98/223 (43%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
ALL+ ++ T +I C + + +AE++ MK G D V ++H Y K
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
L++ E +E+R G D +Y +I + + G + ++ E+ R + +
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
++ +S+ G+ + A ++ + + PD C ++ Y A + EKA + F + A
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
G++P +++ Y + A E + + + G++ E
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 5/224 (2%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
NI Y++ + + A I + + G + D V TTM+ Y G D+A +YF
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G P + +I A R G ES+ M + Y L+ Y +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ D ++ AGI PD ++I + + G ++A + R G P+
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 350 GSVLVAYEKESKLNTAL---EFLIDLEKEGIMVGEEASAILAGW 390
V+ + K A ++ DL + +V SA+L G+
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV--TCSALLHGY 593
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 11/248 (4%)
Query: 134 PIRAEWLSVLKELETMEHPLYL--EVAEHALLEESFEVNIRDYTNIIH-YCGKHNQLEEA 190
P R +S+LKE+ + H L L E EH +L +N + I YC ++
Sbjct: 234 PSRGVCISLLKEILRV-HGLELAREFVEH-MLSRGRHLNAAVLSLFIRKYCSD-GYFDKG 290
Query: 191 ENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITA 250
+L MK G D V T + KAG L A +++L G D S S+I
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 251 YIRAGMPERGESLLEEMDAR-EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
+ + G PE L+ R I+ VY + L G+ A +F I G++P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRPNIF----VYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
D +I Y G+++KA F + ++G P+ ++ A + ++ A
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 370 IDLEKEGI 377
+++ EG+
Sbjct: 467 RNMKTEGL 474
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
E ++++ Y N++H GK +QL + ++ M+ G D ++H G++D
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A E E+ G ++ +I + + G + L M + ALL
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
Y + E A +F+ + AG+ PD + +I Y G EKA M + G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGW 390
+ ++++ E + +N+ E M+ EE I+A W
Sbjct: 652 NESTHHALVLGLEGKRFVNS--------ETHASMLLEE--IIVAKW 687
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 98/223 (43%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
ALL+ ++ T +I C + + +AE++ MK G D V ++H Y K
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
L++ E +E+R G D +Y +I + + G + ++ E+ R + +
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
++ +S+ G+ + A ++ + + PD C ++ Y A + EKA + F + A
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
G++P +++ Y + A E + + + G++ E
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 5/224 (2%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
NI Y++ + + A I + + G + D V TTM+ Y G D+A +YF
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G P + +I A R G ES+ M + Y L+ Y +
Sbjct: 432 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 491
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ D ++ AGI PD ++I + + G ++A + R G P+
Sbjct: 492 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 350 GSVLVAYEKESKLNTAL---EFLIDLEKEGIMVGEEASAILAGW 390
V+ + K A ++ DL + +V SA+L G+
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV--TCSALLHGY 593
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 11/248 (4%)
Query: 134 PIRAEWLSVLKELETMEHPLYL--EVAEHALLEESFEVNIRDYTNIIH-YCGKHNQLEEA 190
P R +S+LKE+ + H L L E EH +L +N + I YC ++
Sbjct: 234 PSRGVCISLLKEILRV-HGLELAREFVEH-MLSRGRHLNAAVLSLFIRKYCSD-GYFDKG 290
Query: 191 ENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITA 250
+L MK G D V T + KAG L A +++L G D S S+I
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 251 YIRAGMPERGESLLEEMDAR-EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
+ + G PE L+ R I+ VY + L G+ A +F I G++P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRPNIF----VYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
D +I Y G+++KA F + ++G P+ ++ A + ++ A
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 370 IDLEKEGI 377
+++ EG+
Sbjct: 467 RNMKTEGL 474
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
E ++++ Y N++H GK +QL + ++ M+ G D ++H G++D
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A E E+ G ++ +I + + G + L M + ALL
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
Y + E A +F+ + AG+ PD + +I Y G EKA M + G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGW 390
+ ++++ E + +N+ E M+ EE I+A W
Sbjct: 652 NESTHHALVLGLEGKRFVNS--------ETHASMLLEE--IIVAKW 687
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
+Y + E L+EES I ++ K ++EE IL M++ D T M
Sbjct: 250 VYEDFKEDGLVEESTTFMI-----LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ G+LD + ++E+R D +YG+++ + G ERG L EM ++I
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
E+Y+ L+ + G A +++ + +G I D I VIK Q +KA
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 333 AFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFR 392
F+ +EP + ++VAY ++L+ +F LE+ G + G S L +F+
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAYVVMNRLS---DFSNVLERIGEL-GYPVSDYLTQFFK 480
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I G + L EA I M+Q G + V + T++ S++ +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G L+ +Y S I +YI A E+ +L + M +++ A S + L+ R+
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
A ++ I ++ V+ AY GQ +A F MK AG EP
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
S+L AY K A E +++E GI A + L F K
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 3/211 (1%)
Query: 176 NIIHYC-GKHNQLEEAENILTAMKQRGFIC--DQVILTTMVHIYSKAGHLDRAEEYFEEI 232
NII YC K Q +A ++ +M+++ C D V T+++H+YS G ++ FE +
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
G + SY +++ AY GM S+L ++ I Y LL +Y R
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
A+ VF ++ P+ +I AYG G +A F M++ GI+P + ++
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 353 LVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
L A + K L + GI + A
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 1/199 (0%)
Query: 172 RDYTNIIHYCGKHNQLEEAENILTAMK-QRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
+++ +I + +E N+ MK Q+ + I M+ ++++ +D+A F
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167
Query: 231 EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
E++ D +Y ++I A+ RAG +L+++M I Y L+ A G
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
N A V + G+ PD +V+ AY Q KA FE MK A + P
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 351 SVLVAYEKESKLNTALEFL 369
++ K + + AL+
Sbjct: 288 IIIYCLSKLGQSSQALDLF 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 132 MKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAE 191
+KP ++L + + ++ A +N Y + I +LE+A
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 192 NILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAY 251
+ +M+++ D V T ++ + A Y +E+ L PL K Y S++ AY
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
+ G ES+ +M Y ++L AY+ A +F ++ GI PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 312 KICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF--L 369
C +++A+ GQ + + M+ I T G+V +E S NT E+
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT----GAVF--FEIFSACNTLQEWKRA 689
Query: 370 IDL 372
IDL
Sbjct: 690 IDL 692
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L LEV H + + + N+ YT ++ K +++EA N+L M G + V +
Sbjct: 407 LALEVL-HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ + K + A E F E+ G D ++ S+I+ + LL +M + +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
A + Y L+ A+ R G + A+++ + + G D+ +IK AG+ +KAR
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 333 AFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAI 386
FE M R G P++ ++ + + A+EF +KE ++ G +
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF----QKEMVLRGSTPDIV 635
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 5/210 (2%)
Query: 185 NQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY 244
N+++ A ++L M + G + + VI T++H SK ++ A + EE+ L+G D ++
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 245 GSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
+I + ++ M R Y L+ +IG + A+ +F I
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 305 AGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA-GIEPTDRCIGSVLVAYEKESKLN 363
I+ I +I + G+ + A+ +M + GI P S++ Y KE +
Sbjct: 351 PEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 364 TALEFLIDLEKEGIMVGEEASAILAGWFRK 393
ALE L D+ +G + IL F K
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 140 LSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQ 199
+S L E++ ++H L+L ++ E N Y +I+ + +++EA ++ M
Sbjct: 501 ISGLCEVDEIKHALWLL---RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 200 RGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPER 259
+G D++ +++ +AG +D+A FE++ G S +I R+GM E
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 260 GESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
+EM R + +L+ R G E +F +Q GI PD
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 44/310 (14%)
Query: 92 AISKLPFKMTKRCKALMRQIICFSA-------------------EKGNVSDLLNAWVKIM 132
A SKL +++R ++L R IC+ A E G +D N W K++
Sbjct: 5 ARSKLALDVSRRSQSLQR--ICYYASLSSRFSGGGGDDGGGSSPEIGG-TDSANEWEKLL 61
Query: 133 KPIRAEWL-------SVLKELETMEHPLYLEVAEHAL--------LEESFEVNIRDYTNI 177
KP + L + + + +E PL + + SF+V Y +
Sbjct: 62 KPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDV----YQVL 117
Query: 178 IHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL-- 235
I G + + + + +L MK G + + + +++ Y KAG + E+R +
Sbjct: 118 IGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 177
Query: 236 GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
EP K SY ++ + + ++ +M +R+I + +++A+ + + A
Sbjct: 178 CEPTFK-SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+ + G +P+ I +I + + +A E M G P V++
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 356 YEKESKLNTA 365
K ++N A
Sbjct: 297 LCKFDRINEA 306
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 162 LLEESFEVNIRDY-TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L+E E +I Y T I YC +L+EAE I +K F + V LT ++H+ K
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+D A F + G + +YG ++ + ++ E L EEM + I Y
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
++ + G + A +F A ++PD ++I+ Y G+ +A + +E+M R
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 341 GIEPTD 346
G++P D
Sbjct: 777 GVKPDD 782
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E F V I ++ +Q+E A +L+ + G + V T+++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+DRA + F+ + G D +Y ++I Y +AGM G L + + + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+ Y + G+ A V+ + GI P+ ++IK G+ +A + + + G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
+EP+ S++ + K L + D+ K G
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + +I+ K +++ A ++ M+QRG D + +T++ Y KAG L + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G LD + S I Y+++G + + M + I Y L++ +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A ++ I G+ P +I + G +E+M + G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFR 392
G ++ K+ + A+ F + + + I + ++++ GW R
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 162 LLEESFEVNIRDY-TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L+E E +I Y T I YC +L+EAE I +K F + V LT ++H+ K
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+D A F + G + +YG ++ + ++ E L EEM + I Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
++ + G + A +F A ++PD ++I+ Y G+ +A + +E+M R
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 341 GIEPTD 346
G++P D
Sbjct: 806 GVKPDD 811
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
V +L + N+ YT +I + ++ EA + + +RG V ++++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
+ K G+L +E++ +G P D YG ++ + G+ +M + I
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
V+ +L+ + R+ + A +VF + + GI PD V++ M G+ E+A F
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 336 NMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
M + G+EP +++ A+ K K L+ L DL
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ-LFDL 591
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E F V I ++ +Q+E A +L+ + G + V T+++ + K G
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+DRA + F+ + G D +Y ++I Y +AGM G L + + + V+ +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+ Y + G+ A V+ + GI P+ ++IK G+ +A + + + G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
+EP+ S++ + K L + D+ K G
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + +I+ K +++ A ++ M+QRG D + +T++ Y KAG L + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G LD + S I Y+++G + + M + I Y L++ +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A ++ I G+ P +I + G +E+M + G P
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFR 392
G ++ K+ + A+ F + + + I + ++++ GW R
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 93/232 (40%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L +S +N+ + ++I + N+ +EA + M G D TT++ + G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ A F + +G D +Y ++I A+ + P G L + M +I A V
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + E A + F+ + + PD +I Y + ++A FE +K
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
P + ++ K + ++ A+ + ++G L WF K
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 93/216 (43%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ + ++ Y+++I + ++ +L M R I D V + ++ ++ K G L
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A+E + E+ G D +Y S+I + + + + M ++ Y L+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+Y + + R+F I G+IP+ ++ + +G+ A+ F+ M G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVG 380
+ G +L +LN ALE ++K + +G
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 92/208 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + E +I Y+ +I+ K ++++ + + +G I + + T+V + ++G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ A+E F+E+ G P +YG ++ G + + E+M + G +Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + A +F ++ G+ PD ++I G +A + F MK G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFL 369
P D ++ A+ S L +++E +
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELI 583
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 2/218 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E F+ + Y +++ K A ++ M++R V + ++ K G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D A F E+ + G D +Y S+I G + G +L EM R I + A
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + G A+ +++ + GI PD +I + +A F+ M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 342 IEPTDRCIGSVLV-AYEKESKLNTALEFLIDLEKEGIM 378
EP D S+L+ +Y K +++ + ++ +G++
Sbjct: 381 CEP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++I K N L EA + M +G D V + +++ Y KA +D F EI
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y +++ + ++G + L +EM +R + Y LL G
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A +F+ +Q + + I ++I A + + A F ++ G++P
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+ L+EE + ++ YT ++ + ++++ +++ G D ++ +++ S++
Sbjct: 343 NTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSES 402
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE-V 278
G+LD+A + FE+++ G ++ ++I Y + G E LL+ M E+ ++
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 462
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR-IAFENM 337
L++A+ E A + +Q G+ PD + KAY G + A + M
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRM 522
Query: 338 KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++P R G+++ Y +E K+ AL F +++ G+
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 105/232 (45%), Gaps = 4/232 (1%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+L + N+R I++ YC + ++EEA MK+ G + + +++ +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYC-EEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+D E + + G D ++ +++ A+ G +R E + +M I +
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM-KR 339
L + Y+R G E A+++ + ++ G+ P+ I +I + AG+ +KA ++ M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA-GW 390
G+ P +++ + + + A E L D+E + ++ + ++A GW
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ E ++ + ++ K +E+AEN+L MK GF+ D + + YS +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A +E G ++ + ++ A + G E+ E +L A+ + +Y ++
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
Y R G+ GA+ +A++ G+ PD +I+ + G+ E A MK G+ P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+ ++ Y ++ + + + L ++E G M
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 7/236 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+LE F + Y I K + + + + MK I ++ K
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 222 LDRAEEYFEEI---RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
++ AE+ F+E+ RLL + +Y ++I Y +AG PE+ + E M A I
Sbjct: 230 MNDAEQLFDEMLARRLLPSLI---TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
+ LL+ + G E A+ V ++ G +PD ++ Y ++E A +E
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFRK 393
+G++ +L A KE K+ A E L +G++ E + ++ G+ RK
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K ++E+AE IL +G + ++VI TM+ Y + G L A E + G D
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+Y +I + G E E + +M + + E Y L+ Y R + + +
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
+ G +P+ G +I + +A+I +M+ G+ P R ++ + K+
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 363 NTALEFLIDLEKEGI 377
A F ++ K+GI
Sbjct: 546 EDAFRFSKEMLKKGI 560
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 171 IRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
+R Y +I C ++E+A M ++G + V T++ S G L AE+
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 231 EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
EI G D +Y S+I+ Y AG +R +L EEM I + Y L+ ++ G
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
E +R+F + L PD + V+ Y + G EKA
Sbjct: 649 -IELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKA 684
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I G+ + ++ +IL M+ G + + V T+++ K L A+
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
++ G R Y +I G E +EM + I Y L+ S
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
G A+ + I G+ PD +I YG AG ++ +E MKR+GI+PT
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT ++H GK Q+ EA + MK+ G + D ++++HI SK G A E F
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS---EVYKALLRAY 286
E++ G D Y +MI+A + E LL+ M+ E + S E Y LL+
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ + + + D L+I+ M+G+ E+A + FE R G+ P D
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 521
Query: 347 RCIGSVLVAYEKES 360
++ EK++
Sbjct: 522 STCKMLVDELEKKN 535
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 3/190 (1%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
L ++ + + R + +IH K + ++A ++ MK F D V T+ V Y K G
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
R E EE+R G + +Y ++ + ++ + E+M ++ Y +L
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+ S+ G + A +F+ + G+ D + +I A A + +A +KR
Sbjct: 385 IHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA---ALHHSRDEMALRLLKRMED 441
Query: 343 EPTDRCIGSV 352
E + C +V
Sbjct: 442 EEGESCSPNV 451
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 1/193 (0%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K N +E A + + D ++H + KA D A + +++ D
Sbjct: 251 KENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVV 309
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+Y S + AY + G R +LEEM Y ++ + + A V++ +
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
+ G +PD K +I G+ + A FE+M G+ +++ A S+
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Query: 363 NTALEFLIDLEKE 375
AL L +E E
Sbjct: 430 EMALRLLKRMEDE 442
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E N+ ++ +I K +L EAE + M +R D +++++ +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A+ FE + + +Y ++I + +A E G L EM R + + Y
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + + + AQ VF + G+ P+ +++ G+ KA + FE ++R+
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFRK 393
+EP ++ K K+ E +L +G+ A + +++G+ RK
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 120/267 (44%), Gaps = 25/267 (9%)
Query: 110 QIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEV 169
++ FSA L++A+VK K + AE LY E +++ S +
Sbjct: 327 NVVTFSA-------LIDAFVKEGKLVEAE-------------KLYDE-----MIKRSIDP 361
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y+++I+ H++L+EA+++ M + + V +T++ + KA ++ E F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G + +Y ++I + +A + + + ++M + ++ Y LL +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A VF+ +Q + + PD ++I+ AG+ E F N+ G+ P
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEG 376
+++ + ++ A L ++++G
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 3/233 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + ++ Y +++ K ++ A ++L M++ D VI T++ K H
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D A F E+ G D +Y S+I+ G LL +M R+I + A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A++++D + I PD +I + M + ++A+ FE M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWFR 392
P +++ + K ++ +E ++ + G +VG + ++ G+F+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVTYTTLIHGFFQ 445
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 2/217 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y+ +I K ++EE + M QRG + + V TT++H + +A D A+ F
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ +G + +Y ++ + G + + E + + Y ++ +
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E +F + L G+ P+ +I + G E+A + MK G P
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAI 386
+++ A ++ + E + ++ G +AS I
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGF--AGDASTI 611
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
NI Y ++ K+ +L +A + +++ D M+ KAG ++ E F
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ L G + +Y +MI+ + R G E +SLL++M S Y L+RA R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLV 317
G+ E + + ++ G D GLV
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTIGLV 614
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
++ +I K +L EAE + M QRG D V T+++ + K LD+A + +
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + R++ +I Y +A + + G L +M R + A + Y L++ + +G E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+ +F + + PD +++ G+ EKA FE ++++ +E ++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
SK++ A + L +G+ + I+ G K
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT++I K NQL++A ++L M +G + +++ Y KA +D E F ++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
L G D +Y ++I + G E + L +EM +R + YK LL G E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A +F+ I+ + + D I ++I A + + A F ++ G++P + ++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 354 VAYEKESKLNTALEFLIDLEKEG 376
K+ L+ A +E++G
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDG 557
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E F+ N Y ++ K Q A +L M++R D V + ++ K G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A F E+ + G D Y ++I + AG + G LL +M R+I + A
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + G A+ + + GI PD +I + Q +KA + M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
P R ++ Y K + ++ LE + G++
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y ++ G+ + A ++ M + G ++ LT +V IY KA A + +
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM-DAREIYAGSEVYKALLRAYSR 288
EE++ P+D Y +++ G+ E E L +M ++ + + Y A+L Y
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G AE A +F+ + AG+ + C +++ G A + + F+ + G++P DR
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Query: 349 IGSVL 353
G +L
Sbjct: 505 CGCLL 509
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++++ E++ Y+ II + N +A M + G + D+V + ++ +YSK+G
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ +E G D ++ + + AG + +L+EM + ++ VY
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL A R G A+ +F+ + AG+ P++K ++K YG A + A +E MK A
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK-AK 390
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
P D + + L+ + L E L + KE +
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I+ K +++E + M QRG + D + T++ Y +AG D A+E F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
R+ P + R+Y ++ E+ L E M EI Y ++ +I
Sbjct: 373 S--RMDSRP-NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
GN E A +F ++ G+ PD +I + Q +K+ + + M+ G+ P
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ +E ++ +++I+ + N++ +A ++++ M++ GF D VI T++ K G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A E F+ + G D +Y S++ +G L+ +M R+I + A
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ + + G A ++++ + + PD +I M G+ ++A+ + M G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEAS--AILAGWFR 392
P +++ + K +++ + ++ + G +VG+ + I+ G+F+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG-LVGDTITYNTIIQGYFQ 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 38/191 (19%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI-RLLGEP-------- 238
+A ++ M R + + + T ++ ++ K G A + +EE+ R +P
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 239 --------------------------LDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
D +Y ++I + ++ + G L EM R +
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
+ Y +++ Y + G + AQ +F + P+ + +++ M + EKA +
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALV 402
Query: 333 AFENMKRAGIE 343
FENM+++ IE
Sbjct: 403 LFENMQKSEIE 413
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L + ++I Y II + +L+EA I+ M++ + D VI TTM++ Y K+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV-YK 280
+ A + ++ G D + +MI G+ + G+ L E + I ++V Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMID-----GIAKNGQ-LHEAIVYFCIEKANDVMYT 407
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD--------KIC------------------ 314
L+ A + G+ +R+F I AG++PD +C
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 315 GLVIK-------AYGMA--GQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
GL++ YG+A G +AR F+ M +GI P ++ AYEKE + A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 366 LEFLIDLEKEGIMVG 380
+ L+D+++ G++
Sbjct: 528 SDLLLDMQRRGLVTA 542
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y+ I K +L+ A +MK+ + V T ++ Y KAG L+ A +
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+R + L+ +Y ++I + + G +R E + M + S VY ++ + +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G+++ A + + G+ D G++I G+ ++A E+M+++ + P
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ AY K ++ A+ L + G
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 76/167 (45%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
+N+ YT +I K +++ AE + + M + + ++ TT++ + + G D A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+ ++ G LD +YG +I+ G + ++E+M+ ++ ++ ++ AY
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
+ G + A ++ + G PD +I GQ +A + F
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVI-------LTTMVHIYS 217
E + NI Y G+ L EAE R FIC Q + M+ Y
Sbjct: 472 EGYSANIDAY-------GERGYLSEAE--------RVFICCQEVNKRTVIEYNVMIKAYG 516
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
+ ++A E FE + G DK +Y +++ A MP +G LE+M +
Sbjct: 517 ISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCI 576
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
Y A++ ++ ++G A+ V+ + I PD + G++I A+ G ++A E M
Sbjct: 577 PYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAM 636
Query: 338 KRAGIEPTDRCIGSVLVAYEKESKLNTA 365
K AGI S++ Y K L+ A
Sbjct: 637 KEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 39/228 (17%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC--DQVILTTMVHIYSKA 219
+LEE + +IH G + QL E +++ MK C D ++ +++K
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH---CAPDTRTYNILISLHTKN 380
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
++RA YF+E++ G D SY +++ A+ M E E L+ EMD +
Sbjct: 381 NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ 440
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK---------------------IC---- 314
AL R Y E + F +AG + + IC
Sbjct: 441 SALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEV 500
Query: 315 --------GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
++IKAYG++ EKA FE+M G+ P D+C + LV
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP-DKCTYNTLV 547
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E + E ++ Y +I+ +++A + + AMK+ G + VI +++ +Y+K G+
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 222 LDRAEEYFEEIRLLGEPLDKRSY------GSMITAYIRAGMPERGESLLEEMDAREIYAG 275
LD AE + R L + +K Y MI Y M + E++ + M R A
Sbjct: 661 LDEAEAIY---RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EAN 716
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
+ +L Y + G E A ++ ++ I+ D V+ + + G+ ++A F+
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFK 776
Query: 336 NMKRAGIEPTD---RCIGSVLV 354
M +GI+P D + +G++L+
Sbjct: 777 EMVSSGIQPDDSTFKSLGTILM 798
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 154 YLEVAEHALL--EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTT 211
YL AE + +E + + +Y +I G E+A + +M G D+ T
Sbjct: 486 YLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
+V I + A + Y E++R G D Y ++I+++++ G E + +EM
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
I VY L+ A++ GN + A +A++ AGI + I +IK Y G ++A
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 332 IAFENM 337
+ +
Sbjct: 666 AIYRKL 671
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 11/264 (4%)
Query: 120 NVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIH 179
+V D L+ W + + E +LKE E + E+ E + +E+N+ Y ++
Sbjct: 140 DVEDALSPWAERLS--NKERTIILKEQIHWERAV--EIFEWFKSKGCYELNVIHYNIMLR 195
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPL 239
GK + +++ M ++G T++ +YSK G A + ++ +G
Sbjct: 196 ILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQP 255
Query: 240 DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV------YKALLRAYSRIGNAE 293
D+ + G ++ Y +A ++ E ++ E A S V Y ++ Y + G +
Sbjct: 256 DEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIK 315
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A F + GI+P +I YG GQ + + MK P R ++
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILI 374
Query: 354 VAYEKESKLNTALEFLIDLEKEGI 377
+ K + + A + +++ +G+
Sbjct: 375 SLHTKNNDIERAGAYFKEMKDDGL 398
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ S + NI Y ++I+ H++L+EA+ I T M + + D V T+++ + KA
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ E F ++ G + +Y ++I + +A + + + ++M + ++ Y
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL + G E A VF+ +Q + + PD ++ + AG+ E F ++ G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
++P +++ + K+ A I ++++G
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+LE N+ + ++I K +L EAE + M QR + V ++++ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A++ F + D +Y ++I + +A G L +M R + + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + + + AQ VF + G+ P+ ++ G+ EKA + FE ++++
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 342 IEP 344
+EP
Sbjct: 481 MEP 483
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I+ K + + A N+L M++ D VI +T++ K H+D A F E+
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y S+I+ G LL +M R+I + +L+ A+++ G
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+++FD + I P+ +I + M + ++A+ F M P +++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWFR 392
+ K K+ +E D+ + G +VG + ++ G+F+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRG-LVGNTVTYTTLIHGFFQ 427
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 185 NQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY 244
N++ EA ++ M + G+ D V TT+VH + A E + + G D +Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 245 GSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
G++I + G P+ +LL +M+ +I A +Y ++ + + + + A +F +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 305 AGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
GI PD +I G+ A +M I P S++ A+ KE KL
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT +I K +E+A +L M GF D V + +V+ K G ++ A +YF
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
R G ++ Y S+I +AG + E L EEM + S Y AL+ A+++
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK- 479
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAY-----GMAGQ--SEKARIAFENMKRAGI 342
++V +AI L + +++ C + Y GM + +E+A ++ M GI
Sbjct: 480 -----HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMV 379
PT C ++ K+ A + L +L G+++
Sbjct: 535 TPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 171 IRDYTNIIHYCGKHNQLEEAENILTAM-----KQRGFICDQVILTTMVHIYSKAGHLDRA 225
I+ N + + K +++ E +I + KQ+ + + ++V + + A +DR
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
EI+ P+ + ++I ++ + GM E + +M I Y L+
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+ A+RVF+ ++ I PD +IK Y AGQ++KA +M+ G E
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 346 DRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
+++ A +S + + +++++GI V A +++ G
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%)
Query: 187 LEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGS 246
++ AE + M+ D V TM+ Y KAG +A E ++ G DK +Y +
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
MI A +L +EMD + I + ++ + G VF+ + G
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
P+ I ++I Y +G E A M G +P V+ K ++ AL
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 367 EFLIDLEKEGIMV 379
++ +G+ +
Sbjct: 418 DYFHTCRFDGLAI 430
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
H +++E F+ ++ Y+ +++ K+ ++EEA + + G + + ++++ KA
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE-----IYA 274
G +D AE FEE+ G D Y ++I A+ + + +L + M+ E +Y
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY- 504
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
Y LL + E A +++D + GI P
Sbjct: 505 ---TYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 74/202 (36%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I C + + M ++G + ++ K G L+ FE +
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI 354
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + Y +I Y ++G E LL M Y ++ + G E
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A F + G+ + +I G AG+ ++A FE M G C +++
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Query: 354 VAYEKESKLNTALEFLIDLEKE 375
A+ K K++ A+ +E+E
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEE 496
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 80/211 (37%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F + + +I GK +EE + MK+ G +++ A +D AE
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
FE + D +Y +MI Y +AG ++ L +M+ R A Y +++A
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ ++ + GI LVI G+ + FENM R G +P
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++ Y K + A+ L + EG
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
AL++ E + Y II+ K E A N+L+ M++ VI ++ K G
Sbjct: 31 ALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
H A+ F E+ G D +Y MI ++ R+G E LL +M R+I +
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
AL+ A + G A+ ++ + GI P +I + + A+ ++M
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
P +++ Y K +++ +E ++ + GI+ L F
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 70/149 (46%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E ++ ++ +I+ K ++ EAE I M +RG + +M+ + K
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ A+ + + D ++ ++I Y +A + G + EM R I A + Y
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
L+ + ++G+ + AQ + + + +G+ P+
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 84/205 (40%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y+ +I + + +AE +L M +R D V + +++ K G + AEE +
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
++ G +Y SMI + + + +L+ M ++ + L+ Y +
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ +F + GI+ + +I + G + A+ M +G+ P
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 350 GSVLVAYEKESKLNTALEFLIDLEK 374
S+L + + +L A L DL+K
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQK 314
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI 252
+LT MK+ D + +T+++ +S AG++++A + F+E+ G D +Y + Y+
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 253 RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
RA P++ E LLE + E ++ ++ + G+ + A RVF+ + G+ P+ K
Sbjct: 402 RAKEPKKAEELLETLIV-ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 460
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
++ Y Q KA + M+ G++P +
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 494
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 132/312 (42%), Gaps = 40/312 (12%)
Query: 116 AEKGNVSDLLNAWVKI----MKPIRAEWLSVLKELETMEHP-LYLEVAEHALLEESFEV- 169
+E GN+ D + A +K+ + P + + +++K P E+ + L E + +V
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVG 185
Query: 170 -NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
NIR + ++ K ++EEA ++ M++ G D V T+ Y + G RAE
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 229 FEEIRLLGEPL--DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
E ++ E + R+ G ++ Y R G G + M + A V+ +L+ +
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 287 SRIGNAEGAQRVF---------DAIQLAG-------IIPDDKICGL---------VIKAY 321
+ + +G V + ++L G ++ K C + V+ A+
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 322 GMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY---EKESKLNTALEFLIDLEKEGIM 378
AG EKA F+ M +AG++P + Y ++ K LE LI + ++
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV 425
Query: 379 VGEEASAILAGW 390
+ + +++GW
Sbjct: 426 I---FTTVISGW 434
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E N+ ++ +I K +L EAE + M +R D +++++ +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A+ FE + + +Y ++I + +A + G L EM R + + Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + + AQ VF + G++PD +++ G+ E A + FE ++R+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFRK 393
+EP ++ K K+ + L +G+ + +++G+ RK
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 110 QIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEV 169
++ FSA L++A+VK K + AE LY E +++ S +
Sbjct: 325 NVVTFSA-------LIDAFVKEGKLVEAE-------------KLYDE-----MIKRSIDP 359
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y+++I+ H++L+EA+++ M + + V T++ + KA +D E F
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G + +Y ++I + +A + + + ++M + + Y LL
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
G E A VF+ +Q + + PD ++I+ AG+ E F ++ G++P
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 80/190 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I K +++E + M QRG + + V TT++H + +A D A+ F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ G D +Y ++ G E + E + ++ Y ++ +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E +F ++ L G+ P+ ++ + G E+A F MK G P
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 350 GSVLVAYEKE 359
+++ A+ ++
Sbjct: 575 NTLIRAHLRD 584
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 86/201 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ +E +I ++++ N++ +A +++ M + G+ D T++H +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A + + + G D +YG ++ + G + SLL++M+ +I G +Y
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ A N A +F + GI P+ +I+ G+ A +M
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 342 IEPTDRCIGSVLVAYEKESKL 362
I P +++ A+ KE KL
Sbjct: 322 INPNVVTFSALIDAFVKEGKL 342
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
+ E F N+R +T++++ + +L EA+ +L MK+ G D V+ T ++ Y+ AG +
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRA-GMPERGESLLEEMDAREIYAGSEVYKA 281
A + ++R G + Y +I A R + + EM+ A Y A
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + G + V D ++ G++P ++ A+ Q E+ E MKR G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 342 IEPTDRCIGSVLVAYE-KESKLNTALEFLIDLEKEGIMVGEEASAILAGWF 391
P D I +V++ K ++ A+ ++E G+ G + I+ F
Sbjct: 408 CHP-DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Query: 159 EHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
E AL E ++ ++ CG L L A KQ G+ + +MV I SK
Sbjct: 85 ELALNESGIDLRPGLIIRVLSRCGDAGNLG-YRFFLWATKQPGYFHSYEVCKSMVMILSK 143
Query: 219 AGHLDRAEEYFEEIRLLG-EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
EE+R E ++ + ++ + A M ++ +L+EM +
Sbjct: 144 MRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEY 203
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
V+ LL A + G+ + A +VF+ ++ P+ + ++ + G+ +A+ M
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM 262
Query: 338 KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
K AG+EP ++L Y K+ A + + D+ K G
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E N+ + +I K +L EAE + M +R D +++++ +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A+ FE + + +Y ++I + +A + G L EM R + + Y
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ + + + + AQ VF + G+ P+ ++ G+ EKA + FE ++R+
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+EPT ++ K K+ + L +G+
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I+ K +++E + M QRG + + V TT++H + +A D A+ F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ G + +Y +++ + G E+ + E + ++ Y ++ +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
G E +F ++ L G+ PD I +I + G E+A F M+ G P
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 89/183 (48%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ S + +I Y+++I+ H++L+EA+++ M + + V T+++ + KA
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D E F E+ G + +Y ++I + +A + + + ++M + ++ Y
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL + G E A VF+ +Q + + P ++I+ AG+ E F ++ G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 342 IEP 344
++P
Sbjct: 536 VKP 538
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 3/233 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + N+ Y +++ K ++ A N+L M+ + VI +T++ K H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D A F E+ G + +Y S+I+ LL +M R+I + A
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A++++D + I PD +I + M + ++A+ FE M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWFR 392
P +++ + K +++ +E ++ + G +VG + ++ G+F+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG-LVGNTVTYTTLIHGFFQ 447
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y +I + LE A+ + M + D + TT+V + K G+L A E +
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS-EVYKALLRAYSR 288
+E+ G D +Y + +R G ++ L EEM A + +A +Y + +
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
+GN A I G++PD VI+ Y GQ + AR ++ M R + P+
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++ + K +L A ++ +++K G+
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 140 LSVLKELETME--HPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAM 197
L VL++ M +Y + EH ++ N ++ C K LE + I M
Sbjct: 210 LKVLRDSRMMNKASAVYETMIEHGIMPTVITFN-----TMLDSCFKAGDLERVDKIWLEM 264
Query: 198 KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMP 257
K+R +V +++ +SK G ++ A + ++R G + S+ +I Y + G+
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 258 ERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV 317
+ + +EM IY + Y + A G + A+ + ++ PD +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTL 380
Query: 318 IKAYGMAGQSEKARIAFENMKRAGIEPT 345
+ Y G+ +A + F++++ I P+
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 38/216 (17%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD---------- 223
Y +I+ K+ ++EEA M++ GF ++ Y K G D
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 224 ----------------------RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGE 261
R ++ E + + P D SY +++ YI+ G
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP-DVVSYNTLMHGYIKMGKFVEAS 394
Query: 262 SLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAY 321
L +++ A +I+ Y L+ GN EGAQR+ + + I PD ++K +
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 322 GMAGQSEKARIAFENMKRAGIEP-----TDRCIGSV 352
G A ++ M R GI+P T R +G +
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ C + + EEAEN + MK G + +++++ YS G +A+E E++
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV-YKALLRAYSRIGNA 292
+G +K +++ YI+ G+ +R LL E+++ YA +E+ Y L+ S+ G
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG-YAENEMPYCMLMDGLSKAGKL 358
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC---- 348
E A+ +FD ++ G+ D ++I A + + ++A+ + R ++C
Sbjct: 359 EEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK----ELSRDSETTYEKCDLVM 414
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+ ++L AY + ++ + + + ++++ + IL +F K
Sbjct: 415 LNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 11/259 (4%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
++ +ES ++N+ +I+ K+ +L+ + MK+ G D V T++ A
Sbjct: 155 QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-----A 209
Query: 220 GHLDRAEEYFEEIRLLGE------PLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIY 273
G + Y + I L+GE +D YG+++ G E E+ +++M
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 274 AGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIA 333
Y +LL +YS G+ + A + ++ G++P+ + ++K Y G +++R
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 334 FENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
++ AG + ++ K KL A D++ +G+ A++I+ +
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 394 XXXXXXXXXXXRDFSTTRE 412
RD TT E
Sbjct: 390 SKRFKEAKELSRDSETTYE 408
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%)
Query: 169 VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+++ DYT II+ K L +A N+ + K RG + + ++++ + G L A
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
F+ + +G + +YG +I + G+ E LL+ M ++ + +Y +++ Y +
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+G E A RV + + PD +IK Y G E+A F K I
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++E E N+ YT II K +LEEA + + G D+ + T++ + G+
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+RA ++ G +Y ++I AG + + ++ + Y
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYST 417
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL +Y ++ N + + A I D +C +++KA+ + G +A + M
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ P +++ Y K ++ ALE +L K +
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 30/270 (11%)
Query: 76 FRWTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPI 135
+R+ E G E + AI L K +C S +++ + KI KP
Sbjct: 142 YRFVEKG-----EMDNAIEVLEMMTNKNVNYPFDNFVC--------SAVISGFCKIGKP- 187
Query: 136 RAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILT 195
L L E A+ N+ YT ++ + +++E +++
Sbjct: 188 ----------------ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVR 231
Query: 196 AMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAG 255
++ GF D V + +H Y K G L A E+ G D SY +I + G
Sbjct: 232 RLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 256 MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG 315
E LL +M + Y A++R ++G E A +F+ I GI D+ +
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+I G +A +M++ GI+P+
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 105/230 (45%), Gaps = 17/230 (7%)
Query: 136 RAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILT 195
++E L+++KE+E E + NI YT +I + E+A +L
Sbjct: 339 KSEALNLVKEME----------------ETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 196 AMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAG 255
M ++G + + + +++ Y K G ++ A + E + + R+Y +I Y ++
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 256 MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG 315
+ + +L +M R++ Y +L+ R GN + A R+ + G++PD
Sbjct: 443 V-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
+I + + + E+A F+++++ G+ P +++ Y K K++ A
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+ +LE ++ Y ++I + + A +L+ M RG + DQ T+M+ K+
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
++ A + F+ + G + Y ++I Y +AG + +LE+M ++ S +
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
AL+ G + A + + + G+ P ++I G + A F+ M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+G +P + + Y +E +L A + + + + G+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F +I Y +I K L A ++ M Q+G + + L T++ K LD A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
G +D+ +YG++I + R E+ + +EM +I + +L+
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
G E A FD + +G++PDD +I Y G+ EKA + + +P +
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKE 375
+L KE AL F L +E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 39/265 (14%)
Query: 167 FEVNIRD--YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
F+VN + Y I+ K +L + + +L MK+ G + ++V +V+ Y K G L
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A + E ++ D +Y +I AG G L++ M + ++ Y L+
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 285 AYSRIGNAEGAQRVFDA------------------------------------IQLAGII 308
+G + A+++ + + + G
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 309 PDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
PD +IKAY G A M + GI+ + ++L A KE KL+ A
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 369 LIDLEKEGIMVGEEA-SAILAGWFR 392
L K G +V E ++ G+FR
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFR 498
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 164 EESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQ---------------- 206
E N+ YT++I YC K +EEAE++ +K++ + DQ
Sbjct: 289 ERGVSRNVVTYTSLIKGYC-KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 207 -------------------VILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
I ++++ Y K+G L AE+ F + D +Y ++
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
+ Y RAG + L ++M +E+ Y LL+ YSRIG ++ + G+
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
D+ C +++A G +A +EN+ G+ + ++ K K+N A E
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 368 FL 369
L
Sbjct: 528 IL 529
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 1/227 (0%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
E+N+ Y ++I+ +E +L M +RG + V T+++ Y K G ++ AE
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
FE ++ D+ YG ++ Y R G + + M + + + +L+ Y
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ G A+++F + + PD ++ Y AG ++A + M + + PT
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE-EASAILAGWFR 392
+L Y + + L + K G+ E S +L F+
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEI-RLLGEPLDKRSYGSMITAYIRAGMPERGESL 263
D + +V+ Y ++G++D+A + +E LG L+ +Y S+I Y G E +
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 264 LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGM 323
L M R + Y +L++ Y + G E A+ VF+ ++ ++ D + G+++ Y
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 324 AGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
GQ A +NM G+ S++ Y K +L
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 7/189 (3%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+R YT +I K + +E A M G D + T ++ + LD E
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E++ G P D ++Y ++I MPE + +M EI + ++++Y
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
N E + V++ + GI PDD ++I+ G+S +A E M D+ +
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM-------LDKGM 539
Query: 350 GSVLVAYEK 358
+ L+ Y K
Sbjct: 540 KTPLIDYNK 548
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 189 EAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMI 248
+A + MK +G + T M+ + K ++ A EYF+++ G D Y +I
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 249 TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGII 308
T + + LL+EM + + Y AL++ + E A R+++ + I
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 309 PDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
P +++K+Y MA E R +E M + GI P D ++ E K A +
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 369 LIDLEKEGI 377
L ++ +G+
Sbjct: 531 LEEMLDKGM 539
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 141 SVLKELE-TMEHPLYLEVAEH--------------ALLEESFEVNIRDYTNIIHYCGKHN 185
+VL E++ + H L +EV E A + F + R Y +++ K
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 209
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
Q E ++L M +G + + T + ++ A +A FE ++ + +
Sbjct: 210 QFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
++ + RA + + + L +++ R Y LL + R+ N A R+++ +
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
G+ PD ++++ + + A F MK G P R ++ + K+S + TA
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 366 LEFLIDLEKEGI 377
+E+ D+ G+
Sbjct: 388 IEYFDDMVDSGL 399
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%)
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
+E+ E + +E + + +I+ + ++E A+ IL MK+ G + + +++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+ K G + A++ F+E++ G LD Y +++ + R G + LL EM A A
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
+ Y +LR S G +E A ++ D G+ + +++ A G+ EKA
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
M GI P ++V + + LI + G++ G ++
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 179 HYCGKHNQLEEAENILTAMKQRGF-ICDQVILTTMVHIYSKAGHLDRAEEYFEE-IRLLG 236
H+C K+ + A ++ MK+ G + + +T++ A E FE+ I G
Sbjct: 205 HHC-KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
D ++ MI + RAG ER + +L+ M Y AL+ + ++G + A+
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 297 RVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
+ FD ++ G+ D ++ + G++++A MK + +L
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 357 EKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
E + AL+ L EG+ + + + I+
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT++++ K+N++++A + MK +G D ++ + K +++ A F
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G + Y S+I+ + G L ++M + Y L+ +
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
GN A ++ +Q G++PD+ I +++ GQ K FE MK+ + P
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+V+ + +E L+ A ++ +GI+
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 14/241 (5%)
Query: 162 LLEESFEV---NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSK 218
L +ESFE N+ I+ + K + +EA +L+ M+ RG + V ++ + +
Sbjct: 431 LFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
++D A F I G + +Y +I R + ++ M + I V
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC------GLVIKAYGMAGQSEKARI 332
Y+ ++ ++G A+ + LA +I + ++C +I + G+ + A
Sbjct: 551 YQTIINGLCKVGQTSKAREL-----LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 333 AFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFR 392
A+E M GI P S++ K ++++ ALE +++ +G+ + A L F
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 393 K 393
K
Sbjct: 666 K 666
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
LLEE + Y ++I + A ++ M + G CD TT++ K G+
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L A E + E++ +G D+ Y ++ + G + + EEM + +Y A
Sbjct: 740 LILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 799
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIA 333
++ + R GN + A R+ D + GI+PD +++ G G + R A
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS--GQVGNLQPVRAA 849
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 126 NAWVKIMKPI------RAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIH 179
N WV + + +WL L+ + + + + E Y ++
Sbjct: 85 NGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGT------------YMKLLV 132
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGE-P 238
GK Q A+ + M + G + T ++ Y+++ +D A ++++ +
Sbjct: 133 LLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQ 192
Query: 239 LDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRV 298
D +Y +++ A + A + +SL +EMD R I + +L Y R+G + ++V
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 299 F-DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYE 357
D + PD +++ +G G+ + +E + GIEP R ++ +Y
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 358 KE---SKLNTALEFLIDLE 373
K+ K+++ +E++ LE
Sbjct: 313 KKRMYDKMSSVMEYMRKLE 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAM-KQRGFICDQVILTT 211
LY E+ E + + NI ++ G+ + ++ E +L+ M D +
Sbjct: 217 LYKEMDERLITPNTVTQNI-----VLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
++ ++ G +D E ++E+ R G + R++ +I +Y + M ++ S++E M E
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE 331
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
+ Y ++ A++ +G+A+ + FD ++ G+ D K +I Y AG
Sbjct: 332 FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I GK Q + A +++ MK R T ++ Y +AG A F +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G DK ++ +I+ R +S + + R VY L+R + R G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A++VF ++LAGI P+ +VI A GQ +A F +M +G P +++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 354 VAYEKESKLNTALEFLIDLEKEG 376
+ K + L+ ++K G
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLG 355
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 1/202 (0%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
E++I +T +I + EA + M+ G + D++ + ++ S+ A+
Sbjct: 183 EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQS 242
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+F+ ++ EP D Y +++ + RAG E + +EM I Y ++ A
Sbjct: 243 FFDSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
R G A VF + +G P+ +++ + AG++EK + MK+ G EP
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 348 CIGSVLVAYEKESKLNTALEFL 369
++ A+ ++ L A++ L
Sbjct: 362 TYNFLIEAHCRDENLENAVKVL 383
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
++ +I + + EA++ ++K R F D ++ T +V + +AG + AE+ F+E++
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
L G + +Y +I A R G R + +M + + L+R + + G E
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
+V++ ++ G PD +I+A+ E A M + E ++
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 354 VAYEKESKLNTA 365
EK+ +N A
Sbjct: 403 RYIEKKRDVNGA 414
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 66/140 (47%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
L++ FE ++ YTN++ + ++ EAE + MK G + + ++ + G +
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
RA + F ++ G + ++ +++ +++AG E+ + +M + Y L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 283 LRAYSRIGNAEGAQRVFDAI 302
+ A+ R N E A +V + +
Sbjct: 367 IEAHCRDENLENAVKVLNTM 386
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 4/233 (1%)
Query: 145 ELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC 204
+L+ LYL + + + + ++ Y +IH K N+L +A +I + ++
Sbjct: 402 DLDEASKLLYLMLKDSSYTDP----DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D+V +++ KAG +++A E +++I + +Y +MI + + GM + LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA 324
+M E+ Y LL + + G+ + A R+F+ +Q PD ++I A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 325 GQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G + A M RAG+ P ++ + K L+ A+ F + G
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L+ F N+ ++ ++ ++ + +A ++L M++ + D T++ + +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L++A E E++ G ++G +I A+ +AG + L+EM + A VY +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+R + G + + +FD + G P +I+ + GQ ++A FE M G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 342 IEPT 345
+ P
Sbjct: 313 VRPN 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N YT +I K L A+ +L M+ ++ K G LD+A F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
EE++ D S+ MI ++AG + ESLL M + Y L+ + ++
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEK 329
G + A FD + +G PD IC V+K G+++K
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 160 HALLE---ESFEV--NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
HA+ + ESF + NI ++ K N +E A +L + G + + V TT++
Sbjct: 175 HAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
Y G ++ A+ EE+ G D +Y ++ Y + G +++++M+ EI
Sbjct: 235 GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
Y ++RA + + A+ +FD + +PD +C VI A + ++A +
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
M + P + + +++ KE ++ A + + EK I + ++AG
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAG 409
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+LE SF + +I + ++++EA + M + + D +L+T++H K G
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMIT-AYIRAGMPERGE-----SLLEEMDAREIYAG 275
+ A + F+E +K S S++T + AGM E+GE L ++M R+
Sbjct: 382 VTEARKLFDE-------FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
+ Y L+ S+ GN + RV + + G P+ ++ + G+ E A
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +IH N++E AE ++ ++++G + D V +++ Y + G +A +E+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y S+I R + L E++ + + + L+ + IGN +
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A + + + I PDD +++ G+ E+AR MKR GI+P +++
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 354 VAYEKE 359
Y K+
Sbjct: 545 SGYSKK 550
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
E+ E ++ +S NI I YC +H ++A + M G Q T+++++
Sbjct: 387 EIREKGIVLDSVTYNIL----INGYC-QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
+ A+E FE++ G D +++ + G +R SLL+EMD I
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
Y L+R G E A+ + ++ GI PD +I Y G ++ A + +
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 336 NMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
M G PT ++L K + A E L +++ EGI+ + +
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT++I+ + N+ EA+ + + +G D V++ T++ + G++DRA +E+
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
++ D +Y ++ G E L+ EM R I Y L+ YS+ G+ +
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A V D + G P ++K + E A MK GI P D SV+
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Query: 354 VA 355
A
Sbjct: 615 EA 616
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 6/239 (2%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
E+ E L+ +S NI +I C + LE A M ++G + T++H
Sbjct: 317 EMKEIGLVPDSVSYNI-----LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
++ AE EIR G LD +Y +I Y + G ++ +L +EM I
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
Y +L+ R A +F+ + G+ PD + ++ + G ++A +
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 336 NMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE-EASAILAGWFRK 393
M I P D ++ E K A E + ++++ GI + +++G+ +K
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 155/387 (40%), Gaps = 46/387 (11%)
Query: 23 SITKFCRVQTRGNSLYQKPSNLDLHRHRFDSALVGIGM----------EEIVKEEVKD-E 71
S T V+T N + +++DL+R F + + I + +++KE V +
Sbjct: 75 STTLLSLVKT-PNLAFNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRK 133
Query: 72 NHRRFRWTEIGHNITHEQNEAISKLPFKMTKRCKALMRQ----IICF--SAEKG------ 119
N R + E+ + H++ E S + F + RC +R I CF EKG
Sbjct: 134 NSIRNLFDELV--LAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTE 191
Query: 120 ---NVSDLL-------NAWVKIMKPIRAEWLSVLKELETMEHPL----YLEVAEHAL-LE 164
++ LL NAWV R E S + M + L L+ A+ L +
Sbjct: 192 TCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM 251
Query: 165 ESFEV--NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
E F + I Y ++ ++E A I++ MK +GF D + T I S +
Sbjct: 252 EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD---MQTYNPILSWMCNE 308
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
RA E E++ +G D SY +I G E + +EM + + Y L
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+ E A+ + I+ GI+ D ++I Y G ++KA + M GI
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFL 369
+PT S++ +++K A E
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELF 455
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I K ++EE + M QRG + + V T++ +AG D A++ F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ G P D +Y ++ + G E+ + E + ++ Y ++ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G E +F ++ L G+ P+ I +I + G E+A F MK G P
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEAS 384
+++ A ++ + E + ++ G VG+ ++
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGF-VGDAST 607
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 110 QIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEV 169
++ FSA L++A+VK K + AE LY E +++ S +
Sbjct: 324 NVVTFSA-------LIDAFVKEGKLVEAE-------------KLYDE-----MIKRSIDP 358
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y+++I+ H++L+EA+++ M + + V T++ + KA ++ E F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G + +Y ++I +AG + + + ++M + + Y LL +
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
G E A VF+ +Q + + PD ++I+ AG+ E F ++ G++P
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +++ K ++ A ++L M++ D VI TT++ +++ A F E+
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y S+I G LL +M R+I + AL+ A+ + G
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A++++D + I PD +I + M + ++A+ FE M P +++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEAS--AILAGWFR 392
+ K ++ +E ++ + G +VG + ++ G F+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRG-LVGNTVTYNTLIQGLFQ 442
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 139 WLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMK 198
+L+ LKE+E E L L H E F + Y+++I+ K + + IL ++
Sbjct: 52 FLTDLKEIEDPEEALSLF---HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVR 108
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
R C + + ++ Y KAG +D+A + F +I +S ++I + G E
Sbjct: 109 YRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELE 168
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPD----DKIC 314
+ +S + + S + L++ + + E A +VFD + + P + +
Sbjct: 169 KAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI 228
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
G + + M KA+ E+M + I P G ++ + + N A + + D+E
Sbjct: 229 GFLCRNDDMG----KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEY 284
Query: 375 EGIMVGEEASAIL 387
G G IL
Sbjct: 285 RGCKPGLVNYGIL 297
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 89/232 (38%), Gaps = 18/232 (7%)
Query: 114 FSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRD 173
FS + + +LN W I + +A L VLKE+ +E N+
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKA--LEVLKEM----------------VERGINPNLTT 232
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ + Q+ A MK+R D V TT+VH + AG + RA F+E+
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G +Y +MI + E + EEM R Y L+R G
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+ + ++ G P+ + ++I+ Y + EKA FE M P
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
L F V+ Y I++ + +A +L M +RG + TM+ + +AG +
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
A E+F E++ +D +Y +++ + AG +R ++ +EM + Y A+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
++ + N E A +F+ + G P+ ++I+ AG+ + + M+ G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 343 EPTDRCIGSVLVAYEKESKLNTAL 366
EP + ++ Y + S++ AL
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKAL 390
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGE-PLDKRSYGS 246
++A + M + G D T++ + K+ +++A E F +R G +D +Y
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNV 200
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
++ + + +L+EM R I Y +L+ + R G A F ++
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
D V+ +G+AG+ ++AR F+ M R G+ P+ +++ K+ + A+
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 367 EFLIDLEKEG 376
++ + G
Sbjct: 321 VMFEEMVRRG 330
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 87/209 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +I K + EAE + M + G + V + ++ ++ + G LD A +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G L Y S+I + + G E + EM +++ Y +L+ Y
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A R++ + GI P ++ AG A F M ++P
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIM 378
++ Y +E ++ A EFL ++ ++GI+
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 91/216 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ ++++ Y ++I+ K + AE + M + V T+++ Y G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+++A + E+ G ++ ++++ RAG+ L EM + Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ Y G+ A + GI+PD +I + GQ+ +A++ + + +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
E + C +L + +E KL AL ++ + G+
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
E+ E ++ +++ Y +IH Q EA+ + + + +++ T ++H
Sbjct: 567 EMTEKGIVPDTYS-----YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
+ + G L+ A +E+ G LD YG +I ++ + LL+EM R +
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFE 335
+Y +++ A S+ G+ + A ++D + G +P++ VI AG +A +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 336 NMKRAGIEPTDRCIGSVL-VAYEKESKLNTALEF 368
M+ P G L + + E + A+E
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT I + N++EEAE + MK+ G + + + M+ Y K G++ +A +
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 230 EEIRLLGEPL-DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
+EI L+ E L + +G+++ + +A SL M + VY L+ + +
Sbjct: 293 KEI-LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
GN A + ++ + PD ++I + Q +A F+ MK I P+
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGI 377
S++ Y KE + AL+ ++ G+
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 85/199 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y +IH K + EA +L+ M+ D T +++ + A F
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
++++ +Y S+I Y + E+ L EM A + + L+ Y +
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
+ + A ++ + + GI+PD +I A+ ++A + +M AGI P D
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Query: 350 GSVLVAYEKESKLNTALEF 368
++ + KE +L+ A++F
Sbjct: 518 ACLVDGFWKEGRLSVAIDF 536
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%)
Query: 197 MKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGM 256
M RG + D I + K G + E+ +E+ LG + Y I R
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 257 PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGL 316
E E + E M + Y A++ Y + GN A ++ I +A ++P+ + G
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLE 373
++ + A + AR F +M + G++P ++ + K + A+ L ++E
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + ++ K +L A ++ M + G + + ++H + K+G++ A
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ L D +Y +I L ++M I+ S Y +L+ Y +
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
N E A + + +G+ P+ +I Y + A + M GI P
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
+++ A+ KE+ + AL D+ + GI + A L F K
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAM-KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
Y I+ Y K ++ E +++ M K+ G + DQV T++H+ +K H D A + ++
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV-YKALLRAYSRIGN 291
+ G +DK Y +++ A + G + L+ EM ++ V Y A++ + R+G
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 292 AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGS 351
+ A+++ + G P+ ++ G+S +AR + P
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 352 VLVAYEKESKLNTALEFLIDLEKEGIMVG 380
++ +E KL+ A + + ++ +G G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPG 558
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%)
Query: 240 DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
D Y SM+ + + + +L M R IY E + ++ +YSR G A +V
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
+Q AG+ P+ IC I + A + EKA E M+ GI P ++ Y
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 360 SKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
++ A+E L D+ +G + + + + G+ K
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC-DQVILTTMVHIYSKAGHL 222
E+ F ++ Y+ I+H K ++ EA++++ M +G D V T +V+ + + G +
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
D+A++ + + G + SY +++ R G ++ + S Y +
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+ R G A V + L G P L++++ G++ +AR E G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC 590
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
+V+ + + +L+ AL L D+
Sbjct: 591 AINVVNFTTVIHGFCQNDELDAALSVLDDM 620
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 89/217 (41%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+ LL ++ + + YT +I ++EA ++ M RG D T++ K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
G +DRA E + L G D SY ++ A + G E GE L+ +M + + Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ R G E A + ++ G+ PD +I A+ G+ + A E M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
G P +VL K K + ALE L + G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 90/226 (39%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+ E + N+ Y+ +I + ++EEA N+L MK++G D ++ + + G
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A E+ E + G D +Y +++ + G ++ + ++ S Y
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+ A G+ A + + GI PD+ +I G ++A +M+
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
P+ VL+ + K ++ A+ L + G E +L
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I K+ ++EE + M QRG + + V TT++H + +A D A+ F+++
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y ++ G E + E M R++ Y ++ A + G E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+F ++ L G+ P+ ++ + G E+A F MK G P
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 185 NQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY 244
N++ EA ++ M + G+ D V TT+VH + A E + + G D +Y
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 245 GSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
G++I + G P+ +LL +M+ +I A +Y ++ + + + A +F+ ++
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 305 AGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
GI PD +I G+ A +M I P +++ A+ KE KL
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + +I Y ++ + +E A + M++R D V TTM+ KAG
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ + F + L G + +Y +M++ + R G+ E ++L EM S Y
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV 317
L+RA R G+ + + ++ G D GLV
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I+ K + + A N+L M++ D VI T++ K H+D A + F ++
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y +I+ G LL +M + I + AL+ A+ + G
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 294 GAQRVFD-AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
A++++D ++ PD +IK + + E+ F M + G+
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRG-FICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
Y II GK EE E++L M + G + D L +++ Y ++ + E ++
Sbjct: 253 YNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF 312
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
+L+G D ++ +I ++ +AGM ++ S+++ M+ R + Y ++ + + G
Sbjct: 313 QLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRI 372
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
E VF ++ G+ P+ ++ AY AG K + + + +
Sbjct: 373 EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCI 432
Query: 353 LVAYEKESKLNTALEFLIDLE 373
+ AY + L T E I +E
Sbjct: 433 INAYGQAGDLATMKELYIQME 453
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 76/156 (48%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I + +I GK ++ +++ M++R F V ++ + KAG +++ ++ F
Sbjct: 320 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ G + +Y S++ AY +AG+ + +S+L ++ ++ + + ++ AY +
Sbjct: 380 RKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQA 439
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
G+ + ++ ++ PD +IK Y G
Sbjct: 440 GDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F + Y +I GK ++E+ +++ MK +G + + ++V+ YSKAG + + +
Sbjct: 352 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 411
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
+I LD + +I AY +AG + L +M+ R+ + +++ Y
Sbjct: 412 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
Query: 287 SRIGNAEGAQRVFDAIQ 303
+ A +FDA+Q
Sbjct: 472 T-------AHGIFDAVQ 481
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
+E + YT + G Q ++A + M G + T+++ +Y K+ LD+A
Sbjct: 140 YEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAF 199
Query: 227 EYFEEIRLLGE-PLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
E ++ + + D ++ +I+ + G + +S++ EM + + Y ++
Sbjct: 200 STLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 286 YSRIGNAEGAQRVF-DAIQLAGIIPDDKICGL--VIKAYGMAGQSEKARIAFENMKRAGI 342
Y + G E + V D I+ +PD +C L +I +YG K + + G+
Sbjct: 260 YGKAGMFEEMESVLADMIEDGDSLPD--VCTLNSIIGSYGNGRNMRKMESWYSRFQLMGV 317
Query: 343 EPTDRCIGSVLVAYEKES---KLNTALEFL 369
+P +++++ K K+ + ++F+
Sbjct: 318 QPDITTFNILILSFGKAGMYKKMCSVMDFM 347
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 7/253 (2%)
Query: 146 LETMEHPLYLE--VAEHALL-----EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMK 198
T+ L+LE V+E +L E + ++ Y +I++ + A ++L M+
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
+R D +T++ + G +D A F+E+ G +Y S++ +AG
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVI 318
G LL++M +REI + LL + + G + A ++ + GI P+ ++
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 319 KAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
Y M + +A + M R P S++ Y +++ ++ ++ K G++
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 379 VGEEASAILAGWF 391
+IL F
Sbjct: 401 ANAVTYSILVQGF 413
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 170 NIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+I +T++I YC ++++ + + +RG + + V + +V + ++G + AEE
Sbjct: 367 DIVTFTSLIKGYC-MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
F+E+ G D +YG ++ G E+ + E++ ++ G +Y ++ +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G E A +F ++ G+ P+ ++I G +A I M+ G P D
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAI 386
+++ A+ ++ L + + + +++ G +AS+I
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGF--SADASSI 581
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 88/207 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +++ K + + +L M R + + + ++ ++ K G L A E ++E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y +++ Y ++L+ M + + +L++ Y + +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
+VF I G++ + ++++ + +G+ + A F+ M G+ P G +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVG 380
KL ALE DL+K + +G
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLG 472
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 197 MKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGM 256
M+ RGF CD V +T++ + +A + +A FEE+R G ++ +Y S+I A++R G
Sbjct: 317 MEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 257 PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGL 316
+ LL++M + Y +L + GN + A VF+ + I PD
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
+I +G+ +A FE+MK P + ++ + KL+ A + + +G
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Query: 377 IMVGEEASAIL 387
+ + S L
Sbjct: 496 FTLDRDVSDTL 506
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I K ++E+AE + + M + G D V +++ Y L RAE E+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGES-LLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
G LD SY ++ + R P++ + +++EM+ R + Y L+ + R N
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNT 341
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A R+F+ ++ G++ + +IKA+ G S A+ + M G+ P
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 169 VNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEY 228
+N+ YT++I + A+ +L M + G D++ TT++ K+G++D+A
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGV 417
Query: 229 FEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
F ++ D SY S+I+ R+G L E+M +E +K ++ R
Sbjct: 418 FNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIR 477
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKA 320
A +V+D + G D + +IKA
Sbjct: 478 GKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 97/216 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + N+ +T +I K L EA N+ M +R + + ++++ + G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L A+ F+ + G D +Y ++IT + ++ E G L EM + + + Y
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ Y + G AQ+VF+ + G+ PD +++ G+ EKA + E+++++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
++ ++ + KL A L ++G+
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 185 NQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY 244
N+ +EA +++ +M GF+ + VI T+++ K L+ A E F + G D +Y
Sbjct: 163 NRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 222
Query: 245 GSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
++I+ +G LL +M R+I + AL+ + + GN A+ ++ +
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 305 AGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNT 364
++P+ +I + + G A+ F+ M G P +++ + K ++
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 365 ALEFLIDLEKEGIMVGE 381
++ ++ +G +VG+
Sbjct: 343 GMKLFCEMTYQG-LVGD 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I K ++E+ + M +G + D T++H Y +AG L+ A++ F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G D +Y ++ G E+ ++E++ E+ Y +++ R
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ A +F ++ G+ PD +I G +A MK G P++R
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 4/228 (1%)
Query: 155 LEVAEHALLEESFEVNIRD---YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTT 211
+E AE+ E S + D Y ++ C + +++EA+ LT M QRGFI D T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 212 MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE 271
++ + G ++RA YF ++ LG + ++ S+I + G ++ +LEEM
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 272 IYAGSEVYKALLRAYSRIGNAEGAQRVF-DAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
+ AL+ + G E A R+F ++ P+ +I Y + +A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 331 RIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
+ F MK G+ P +++ + K A E + + EG M
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+E F NI Y I K ++ EA +L G D V T ++ K ++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+A +F + G D R +I A+ R + E L + + + + E Y +++
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
Y + G+ + A + F ++ G +PD G +I ++A +E M G+
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLE 373
P + + V +AYE K N + +I LE
Sbjct: 601 PPE--VTRVTLAYEY-CKRNDSANAMILLE 627
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 43/264 (16%)
Query: 164 EESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
++++ N+ YT++I YC K ++L AE + + MK++G + TT+++ + KAG
Sbjct: 351 SDTYKPNVHTYTSMIGGYC-KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 223 DRAEEYFEEIRLLGE---------------PLDKRSYGS----MITAYIRAGMPERGES- 262
RA +E + L+G+ L K+S ++ G+ G +
Sbjct: 410 GRA---YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 466
Query: 263 --LLEE----------------MDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
L++E M+ A + L+ A+ R + ++R+F +
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 305 AGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNT 364
G+IP + +I Y G + A F NMKR G P GS++ K+S ++
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 586
Query: 365 ALEFLIDLEKEGIMVGEEASAILA 388
A + + G+ E LA
Sbjct: 587 ACKLYEAMIDRGLSPPEVTRVTLA 610
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%)
Query: 208 ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEM 267
++ M+ +S+ G L+ A +++ G + ++ + G+ E E++ +EM
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 268 DAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQS 327
R + S YK ++ R G + A R + G IPD+ C L++ A G
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 328 EKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
+A F M G +P S++ K+ + A E L ++ + G
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 13/239 (5%)
Query: 154 YLEVAEHALLEESFEV----NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVIL 209
Y++ + +E F+V N+ + +I + ++ EA+N+ M +R D V
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 210 TTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDA 269
M+ YS++GH A F ++ G L++ S+ S ++ E G+ L +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 270 REIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEK 329
G V ALL Y + G+ E A +F + I+ + + I Y G E
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM----IAGYSRHGFGEV 493
Query: 330 ARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE-GIMVGEEASAIL 387
A FE+MKR G++P D + +VL A ++ ++ + ++ G+M + A +
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM 552
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 8/272 (2%)
Query: 85 ITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLK 144
+ E+ E +L M R + +I A+ G +S+ N + K+ K W +++
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 145 ELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC 204
H + E +N +++ + C LE + + + + G+
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
+ ++ +Y K G ++ A + F+E + G+ D S+ +MI Y R G E
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKE--MAGK--DIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAE-GAQRVFDAIQLAGIIPDDKICGLVIKAYGM 323
E M + A+L A S G + G Q + Q G++P+ + ++ G
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 324 AGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
AG E A +NM EP G++L A
Sbjct: 559 AGLLEDAHNLMKNMP---FEPDAAIWGTLLGA 587
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ + L+ + + M++ G + D V T +V KAG+ A + + +R
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +Y ++I +R + L M++ + + Y + Y + G++
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A F+ ++ GI P+ C + + AG+ +A+ F +K G+ P ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 354 VAYEKESKLNTALEFLIDLEKEG 376
Y K +++ A++ L ++ + G
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENG 533
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+E ++ YT +I +L+ A+ + MK D+V T++ +S LD
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
++++ E+ G D ++ ++ A +AG L+ M + I Y L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
R+ + A +F ++ G+ P + I YG +G S A FE MK GI
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
P + L + K + A + L+ G++
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 87/205 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ +T ++ K EA + L M+ +G + + T++ + LD A E F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ LG +Y I Y ++G E+M + I A L + ++
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A+++F ++ G++PD +++K Y G+ ++A M G EP +
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 350 GSVLVAYEKESKLNTALEFLIDLEK 374
S++ K +++ A + + +++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKE 566
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
L++ + + F Y +I K +L EA+ + M G + I +++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+ KAG D A F+ + G D ++Y ++ G + G +E+ +
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLA-GIIPDDKICGLVIKAYGMAGQSEKARIA 333
Y ++ + E A +F+ ++ + GI PD +I G+AG E+A
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 334 FENMKRAGIEPTDRCIGSVLVAYEKESK 361
+ ++RAG+EP +++ Y K
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 96/223 (43%), Gaps = 1/223 (0%)
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
+EV +LE F +++ Y++++ GK ++ +L M+ G + T +
Sbjct: 208 MEVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+ +AG ++ A E + + G D +Y +I A A + + + E+M
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
Y LL +S + + ++ + ++ G +PD +++ A AG +A
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+ M+ GI P +++ + +L+ ALE ++E G+
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 170 NIRDYTNIIHYCG--KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
N+ Y +I CG + ++L++A + M+ G + Y K+G A E
Sbjct: 397 NLHTYNTLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
FE+++ G + + + + + +AG + + + + S Y +++ YS
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
++G + A ++ + G PD + +I A + ++A F MK ++PT
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 348 CIGSVLVAYEKESKLNTALEFLIDLEKEG 376
++L K K+ A+E + ++G
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++EE N YT ++ K EEA MK GF+ ++V ++++ + KAG
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++A +E++R G + +M++ Y + + SL +M+ +I A +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++R Y ++G AQ +F+ + ++ D+K + + + +G KA E MK
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD 463
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
I + +L Y K ++ A E L K G+
Sbjct: 464 IPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL 499
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
L+ S+ ++ YT ++ G+ +++ AE M + G D V TM+ Y++ G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
+++ ++ L Y M+++ + + L EM + Y +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+ +Y++ G E A + F ++ G +P++ VI AG EKA +E+M+ GI
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
P++ ++L Y K AL D+E+ I E
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADE 398
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 90/237 (37%), Gaps = 38/237 (16%)
Query: 158 AEH---ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
AEH LE++ E++ Y +I + +L+ A I M G C TM+
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+Y + LD+A E F R G LD++ Y +MI Y + G SL EM + I
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 275 GSEVYKA----------------LLRAYSRIGN--------------AEGAQ-----RVF 299
G+ Y LL+A R G AE +Q +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
++ GI ++ A AG E+A + M AGI P C ++L Y
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YTN+I + GK ++ EA ++ + M+++G MV I + + +E + +
Sbjct: 847 YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME 906
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G D +Y ++I Y + E + + + I + +LL A + G E
Sbjct: 907 RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMME 966
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+R + + AGI PD ++K Y G +EK + +E M R+ +E DR + SV+
Sbjct: 967 EAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVE-DDRFVSSVV 1025
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 176 NIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL 235
+I G+ ++L+EA+ + A + VI +M+ Y + G L+ A F E
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI-RSMIDAYVRCGWLEDAYGLFMESAEK 733
Query: 236 GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
G + ++ A G E + + I + Y L++A G + A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+++ + +G+ + +I YG Q +KA F N +R+G+ ++ ++++
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 356 YEKESKLNTALEFLIDLEKEGIMVG 380
Y K K++ AL +++K+GI G
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPG 878
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT--TMVHIYSKA 219
+++ N Y ++I K N+LEEA ++ M +G CD I+T +++ Y KA
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG--CDPDIMTFNILINGYCKA 416
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
+D E F E+ L G + +Y +++ + ++G E + L +EM +R + Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
K LL G E A +F I+ + + D I ++I A + + A F ++
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 340 AGIE 343
G++
Sbjct: 537 KGVK 540
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 100/226 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ N+ ++ +I K +L EA+ +L M QRG + + +++ + K
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ A + + + G D ++ +I Y +A + G L EM R + A + Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L++ + + G E A+++F + + PD +++ G+ EKA F ++++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
+E ++ SK++ A + L +G+ + A I+
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E F+ N Y +++ K Q A +L M++R D V + ++ K G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD A F E+ + G D +Y ++I + AG + G LL +M R+I +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ ++ + EG R D + + M + G
Sbjct: 339 LIDSFVK----EGKLREADQL-------------------------------LKEMMQRG 363
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
I P S++ + KE++L A++ ++DL
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQ-MVDL 393
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 144 KELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFI 203
+E E ME +L+ + + + ++I GK +++AE + M +I
Sbjct: 292 QEFEKMEQTF------KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 204 CDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESL 263
+ M+ +Y G + RA E FEE+ L + +M+ Y R G+ + L
Sbjct: 346 PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKL 405
Query: 264 LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYG 322
A ++ + YK L +AY++ E Q + ++ GI+P+ + ++ +G
Sbjct: 406 FHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICD----QVILTTMVHIYSKAGHLDRAEEYF 229
Y+ +I GK Q A + + MK G D ++T +H KA L++ Y
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 230 EEIRLL--GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
++++ + +P + +Y ++ A+ ++G ++ +L +++D + + ++ AY
Sbjct: 196 DKMKGIERCQP-NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ G + + V ++ PD ++I +YG + EK F+++ R+ +PT
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 348 CIGSVLVAYEKESKLNTA 365
S+++ Y K ++ A
Sbjct: 315 TFNSMIINYGKARMIDKA 332
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I + +I GK + E+ E ++ + +M+ Y KA +D+AE F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ + +Y MI Y G R + EE+ + + A+L Y R
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
G A ++F + PD + KAY A E+ +I + M++ GI P R
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
Query: 182 GKHNQLEEAENILTAM-KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
GK ++ + + M KQR +I D + + ++ + K G A F E++ G D
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 241 KRSYGSMITAYI----RAGMPERGESLLEEMDAREIYAGSEV-YKALLRAYSRIGNAEGA 295
Y ++ITA++ +A E+ L++M E + V Y LLRA+++ G +
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+F + ++ + PD V+ AYG G ++ M+ +P ++ +
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 356 YEKESKL 362
Y K+ +
Sbjct: 288 YGKKQEF 294
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 144 KELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFI 203
+E E ME +L+ + + + ++I GK +++AE + M +I
Sbjct: 292 QEFEKMEQTF------KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 204 CDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESL 263
+ M+ +Y G + RA E FEE+ L + +M+ Y R G+ + L
Sbjct: 346 PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKL 405
Query: 264 LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYG 322
A ++ + YK L +AY++ E Q + ++ GI+P+ + ++ +G
Sbjct: 406 FHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICD----QVILTTMVHIYSKAGHLDRAEEYF 229
Y+ +I GK Q A + + MK G D ++T +H KA L++ Y
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 230 EEIRLL--GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
++++ + +P + +Y ++ A+ ++G ++ +L +++D + + ++ AY
Sbjct: 196 DKMKGIERCQP-NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ G + + V ++ PD ++I +YG + EK F+++ R+ +PT
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 348 CIGSVLVAYEKESKLNTA 365
S+++ Y K ++ A
Sbjct: 315 TFNSMIINYGKARMIDKA 332
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ + ++ GK+ ++E E +LT M+ D + ++ Y K ++ E+ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD--------------------- 268
+ + E ++ SMI Y +A M ++ E + ++M+
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 269 -----AREIYA---------GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
AREI+ + A+L Y R G A ++F + PD
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ KAY A E+ +I + M++ GI P R
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 198 KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI----R 253
KQR +I D + + ++ + K G A F E++ G D Y ++ITA++ +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 254 AGMPERGESLLEEMDAREIYAGSEV-YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
A E+ L++M E + V Y LLRA+++ G + +F + ++ + PD
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
V+ AYG G ++ M+ +P ++ +Y K+ +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE-EI 232
YT I+ + EEA + T MK+ G D + ++H ++AG L+ AE F E+
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI-YAGSEVYKALLRAYSRIGN 291
LG ++ +Y SMI Y ++ LL+EM++ + Y+ LLR+ + G+
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 292 -AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
E + + + + + D+ +I+ A E A FE M I P R
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE-EI 232
YT I+ + EEA + T MK+ G D + ++H ++AG L+ AE F E+
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI-YAGSEVYKALLRAYSRIGN 291
LG ++ +Y SMI Y ++ LL+EM++ + Y+ LLR+ + G+
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 292 -AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
E + + + + + D+ +I+ A E A FE M I P R
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++++ F ++ Y ++H+ N+ A N+L M++ G + TT++ S+AG
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ + + +E +G D Y MIT YI G E+ E + +EM + Y +
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++R + G + A + ++ G P+ + ++ AG+ +A ++M G
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 105/283 (37%), Gaps = 7/283 (2%)
Query: 98 FKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEV 157
F+ T C L+ +I E + L++ +K P A ++L E L +V
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTCGEAGLARDV 206
Query: 158 AEHALLEESFEVNIRDYTN----IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMV 213
E + ++F N R Y + I+H Q + + + M + GF D + ++
Sbjct: 207 VEQFIKSKTF--NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 214 HIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIY 273
+ G DR +E+ G D +Y ++ P +LL M +
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 274 AGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIA 333
G + L+ SR G E + D G PD ++I Y G+ EKA
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 334 FENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
F+ M G P S++ + K A L ++E G
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 142 VLKELETMEHPLY-LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQR 200
+L L T PL L + H + E E + +T +I + +LE + + +
Sbjct: 298 LLHHLATGNKPLAALNLLNH-MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 201 GFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERG 260
G D V T M+ Y G L++AEE F+E+ G+ + +Y SMI + AG +
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 261 ESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
+LL+EM++R VY L + N + A +V +A
Sbjct: 417 CALLKEMESRGCNPNFVVYSTL------VNNLKNAGKVLEA 451
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT ++ G+ +++ ++ MK++G + D V T+++H S +G +D A +EE+R
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G SY + + G E + +EM + Y L+ G E
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCE 244
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
A +F +Q G+ PD C ++I G++ MK G+
Sbjct: 245 EALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ ++I C +L E + ++ + GF+ DQ I T ++ YSK + A F+EI
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR----------------------E 271
+G + S+ +MI+ +++ E L EM + E
Sbjct: 358 CVGNVV---SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Query: 272 IYA---------GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYG 322
++A S V ALL AY ++G E A +VF I I+ ++ Y
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA----WSAMLAGYA 470
Query: 323 MAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
G++E A F + + GI+P + S+L
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 174 YTNIIHYCGKHN----QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+++I++ C N Q ++ + +C L TM Y+K G+++ AEE F
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM---YAKKGNIESAEEVF 553
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ R D S+ SMI+ Y + G + + +EM R++ + + A +
Sbjct: 554 KRQR----EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 290 GNAEGAQRVFD-AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G E ++ FD ++ I P + ++ Y AGQ EKA ENM R
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKE 375
I + ++K A E +I ++ E
Sbjct: 670 ILAACRVHKKTELGRLAAEKIIAMKPE 696
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG-EPLDKRSYGSMITAYIRAGMPERGESL 263
D ++ T + IY G L A + FE +G L +Y SM++++++ G + +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 264 LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGM 323
L++M A Y +++ ++G A+ A V D + G D + +I A G
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 324 AGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
A + ++A F++MK GI P +++ K KL A ++L + G +
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 384 SAIL 387
IL
Sbjct: 773 DTIL 776
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%)
Query: 187 LEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGS 246
LEEA + MK+ ++H ++K G D + +F+++ G +Y
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
MI + G E L EEM R + + Y +++ + ++G + F+ ++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
PD +I + G+ + MK G++P +++ A+ KE + A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 367 EFLIDLEKEGIMVGE 381
+F +D+ + G++ E
Sbjct: 388 KFYVDMRRVGLVPNE 402
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y+ ++ K +++A M++ G + ++ T+++ K G+L A
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ +G + +Y ++I A + E L +MD + Y AL+ + +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
N + A + + ++ GI PD + G I + E A++ MK GI+
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMV 379
+++ AY K L L ++++ I V
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I K +E A + MK RG + D V +M+ + K G LD +FEE++
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ D +Y ++I + + G G EM + Y L+ A+ + G +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
A + + ++ G++P++ +I A G A M + G+E
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L+ E N+ YT +I +++EAE + M G I + ++H + KA +
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+DRA E E++ G D YG+ I E + ++ EM I A S +Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 282 LLRAYSRIGNAEGAQRVFDAIQ 303
L+ AY + GN + D ++
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMK 569
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 144/363 (39%), Gaps = 25/363 (6%)
Query: 35 NSLYQKPSNLDLHRHRFDSALVGIGMEEIVKEEVKDEN--HRRFRWTEIGHNITH--EQN 90
N L+ P L FD L I + ++ E +D + F+W+ + H E
Sbjct: 90 NDLWDDPGLEKL----FDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESY 145
Query: 91 EAISKLPF--KMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKP---IRAEWLSVLKE 145
++ + F +M +++++++ S +V D+L + + P + SVL +
Sbjct: 146 CIVAHILFCARMYYDANSVLKEMV-LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID 204
Query: 146 LETMEHPL--YLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFI 203
L +E + + ++ + ++ R ++H K + ++ + M G
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKT-----RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGAR 259
Query: 204 CDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESL 263
M+ K G ++ A FEE++ G D +Y SMI + + G +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 264 LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGM 323
EEM Y AL+ + + G + ++ G+ P+ ++ A+
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 324 AGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA 383
G ++A + +M+R G+ P + S++ A K L+ A L E + VG E
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR----LGNEMLQVGVEW 435
Query: 384 SAI 386
+ +
Sbjct: 436 NVV 438
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT++I K L +A + M Q G + V T ++ A + AEE F ++
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + SY ++I +++A +R LL E+ R I +Y + + E
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
A+ V + ++ GI + I ++ AY +G + + MK IE T
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 35/258 (13%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
E+ ++ + E+ + ++ Y +II K + A M + G + V T++++
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
+ K+ +D A E E++ + LD +YG++I + + + +L E+ +
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDA-------------------------IQLA----- 305
VY +L+ + +G + A ++ I LA
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 306 -----GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKES 360
GI+PD+ + +++ GQ KA E MK+ + P +V+ + +E
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Query: 361 KLNTALEFLIDLEKEGIM 378
LN A ++ ++GI+
Sbjct: 815 NLNEAFRLHDEMLEKGIV 832
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 151 HPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILT 210
+ L+ E+ E L+ N+ Y ++I +++ A ++ M G CD T
Sbjct: 680 YTLFSELPELGLMP-----NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 211 TMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR 270
TM+ K G+++ A + + E+ LG D+ + ++ + G + +LEEM +
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 271 EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
++ +Y ++ + R GN A R+ D + GI+ DD + L++ +G+ EK
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV-----SGRVEKP 849
Query: 331 RIA 333
A
Sbjct: 850 PAA 852
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR-LLGEPLDKRSYGS 246
EEA I + RG D ++ + V K L A + E+R LG P + +Y S
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG-AQRVFDAIQLA 305
+I A+++ G E +++EM I +L+ Y + GN G A +F+ ++
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCK-GNELGKALDLFNRMEEE 374
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
G+ PD + ++++ + + EKA + MK I P+ + +++ K A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 366 LEFLID 371
LE D
Sbjct: 435 LEIFND 440
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ +I G+ ++L A IL M ++G D+ + ++ Y KAG + + + F++++
Sbjct: 153 HMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
LG +SY S+ +R G + +M + + Y +L + E
Sbjct: 213 DLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLE 272
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A R F+ ++ GI PDD +I + + ++A F MK I P+ +++
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 354 VAYEKESKLNTALEFLIDLEKEGI 377
Y +++ L ++ GI
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGI 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 1/203 (0%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
E I+ Y ++ + + A+ M G + M+ + + L+ A
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+FE+++ G D ++ +MI + R + E L EM +I Y +++ Y
Sbjct: 277 FFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
Query: 288 RIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR 347
+ + R+F+ ++ +GI P+ ++ AG+ +A+ +NM I P D
Sbjct: 337 AVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN 396
Query: 348 CIG-SVLVAYEKESKLNTALEFL 369
I +LV+ K + A E L
Sbjct: 397 SIFLKLLVSQSKAGDMAAATEVL 419
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+++ E+ Y II Y + Q +AE + + +RG + DQ L ++ ++K G+ D
Sbjct: 467 QDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPD 525
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+ E + + G P + +Y +I +Y+ G P ++ L+ M S ++++++
Sbjct: 526 SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Query: 284 RAYSRIGNAEGAQRVFDAI--QLAGIIPDDKICGLVIKAYGMAGQSEKA 330
+ G + A RV + + GI + + +++A M G E+A
Sbjct: 586 ESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++++ F+ + Y+NI+ GK +L +A ++ MKQRG + I +++ ++ +A
Sbjct: 414 MVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMD 473
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L RAE+ ++E++ DK SY SMI+AY R+ ER L +E +
Sbjct: 474 LRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGI 533
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKAR 331
++ +S+ + R+ +++ G D ++ + A AG + + R
Sbjct: 534 MVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIR 583
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
+ +E ++ AM++ IL +V+ +SK A + +E +
Sbjct: 330 REGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQV 389
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+Y I AY R + E L +EM + Y ++ Y + A R+ +
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKL 362
+ G P+ I +I +G A +A ++ MKRA + P S++ AY + +L
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 363 NTALEFL---------IDLEKEGIMVG 380
+E ID GIMVG
Sbjct: 510 ERCVELYQEFRMNRGKIDRAMAGIMVG 536
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
EE F VN++ ++ C + N +EA +L + D V ++ +++ G L+
Sbjct: 124 EECF-VNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLN 182
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A+ +E+ +G D +Y SMI Y AG + L +EM + S Y +L
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRIL 242
Query: 284 RAYSRIGNAEGAQRVFDAIQL---AGII-PDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
+ G+ E A + ++ G+I P+ LVI+A+ + E+A + + M
Sbjct: 243 EGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGN 302
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNT-ALEFLID 371
G P +R VL+ E+ + AL LID
Sbjct: 303 RGCMP-NRVTACVLIQGVLENDEDVKALSKLID 334
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
CG +E E +L+ + ++G + D ++ T+ K + + FE+++ G D
Sbjct: 418 CGAGKTIEAIE-MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 241 KRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300
+Y +I ++ R G + ++ EE++ + Y +L+ + G+ + A F
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 301 AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKES 360
+Q G+ PD +++ +G + E A FE M G +P +L EK
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Query: 361 KLNTALEFLIDLEKEGI 377
+ A++ ++++G+
Sbjct: 597 RTAEAVDLYSKMKQQGL 613
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 69/171 (40%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y + GK Q+ ++ MK+ G D ++ + + G +D A FEE+
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D SY S+I + G + +EM + + Y L+ + + E
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A +F+ + + G P+ +++ G++ +A + MK+ G+ P
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
+++EAE+ ++++Q+ C + + V Y +AG +A + F +RL PL K Y
Sbjct: 508 KVKEAEDFFSSLEQK---CPENK-ASFVKGYCEAGLSKKAYKAF--VRL-EYPLRKSVYI 560
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
+ + G E+ +L++M A + G + ++ A+ ++ N AQ +FD +
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
G+IPD ++I Y + +KA FE+MK+ GI+P
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPL 239
+C K N + EA+ + M +RG I D T M+H Y + L +AE FE+++ G
Sbjct: 601 FC-KLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 240 DKRSYGSMITAYIRAGMPERGES--------------LLEEMDAREIYAGSEVYKALLRA 285
D +Y ++ Y++ PE E+ +L E A I Y L+
Sbjct: 660 DVVTYTVLLDRYLKLD-PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDR 718
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
++ N E A +FD + +G+ PD +I +Y G + A
Sbjct: 719 QCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
I YC K+ L EA L M +G + VI++ ++ Y K A E F+E R +
Sbjct: 325 IDRYC-KNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
LD+ Y A + G E LL+EM R I Y L+ Y G A
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 297 RVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+ D + G+ PD +++ G E+ +E MK G +P
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPN 492
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 6/201 (2%)
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYC--GKHNQLEEAENILTAMKQRGFICDQVILTTM 212
LE+ E F +I + H+C G L + +L M GF ++ +
Sbjct: 163 LEIFEGIRFRNFFSFDI----ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQI 218
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ + + G + A + + G + + +++ + R+G P++ L +M
Sbjct: 219 LRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGC 278
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
Y +L++ + +G + A V +Q G+ PD +C L+I Y G+ E+AR
Sbjct: 279 SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARK 338
Query: 333 AFENMKRAGIEPTDRCIGSVL 353
F ++++ + P S+L
Sbjct: 339 VFTSLEKRKLVPDQYTFASIL 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 79/165 (47%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ E F N + I+ C + + EA ++ M G + + +V + ++G
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE 262
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+A + F ++ +G + +Y S+I ++ GM + ++L ++ + + +
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
++ Y+R+G E A++VF +++ ++PD ++ + ++G+
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK 367
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 16/217 (7%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+T ++ C EE I + G + D + T+V++Y ++G+ + A + + +
Sbjct: 143 FTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM- 201
Query: 234 LLGEPL-DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
P+ D S+ S+++AY+ G+ + +L +EM+ R + E + ++ Y+ G
Sbjct: 202 ----PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNV----ESWNFMISGYAAAGLV 253
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE-PTDRCIGS 351
+ A+ VFD++ + ++ + + + AY G + F M E P + S
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAM----VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 352 VLVAYEKESKLNTALEFLIDLEKEGIMV-GEEASAIL 387
VL A L+ + ++K GI + G A+A++
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 142 VLKELETMEHP-----LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTA 196
VLK L++ ++P L+ H S V Y +I+ + + I+
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVV----YHHILRRLSETRMVNHVSRIVEL 68
Query: 197 MKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR-LLGEPLDKRSYGSMITAYIRAG 255
++ + CD+ + +++ Y K D+A + F+ +R + G RSY +++ A++ A
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 256 MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG 315
+ ESL + + + Y L++ + E A+ D + G PD
Sbjct: 129 QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
VI AG+ + A F+ M G+ P C ++ + KE TA+E
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 10/221 (4%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++E VNI Y +I ++ +++EA I M +G+ D+ +H G+
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+++A +E+ G LD +Y S+I + E +L++EM + S V A
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 282 LLRAY---SRIGNAEGAQRVF--DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFEN 336
L+ SR+G A R + + + + ICGL AG+ +A +
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC-----KAGKFGEASAFVKE 524
Query: 337 MKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
M G +P + +L ++ K++ ALE + G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 103/248 (41%), Gaps = 2/248 (0%)
Query: 146 LETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICD 205
L+ +H +E+ + L + S N++ + +I K ++++ I MKQ D
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 206 QVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLE 265
++++H AG++D+AE F E+ +D +Y +M+ + R G + L
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
M+ + Y L++ G + A ++ + G D G+ I + G
Sbjct: 350 IMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 326 QSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEE-AS 384
KA + ++ +G S++ K+ +L A + ++ K G+ + +
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 385 AILAGWFR 392
A++ G R
Sbjct: 469 ALIGGLIR 476
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 21/239 (8%)
Query: 108 MRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESF 167
MR+I + + LLNA+V+ + ++ E L Y E A A
Sbjct: 104 MREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFA-----------YFETAGVA------ 146
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEE 227
N++ Y +I K + E+A L M + GF D +T+++ +KAG LD A E
Sbjct: 147 -PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 228 YFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE-MDAREIYAGSEVYKALLRAY 286
F+E+ G D Y +I +++ + L + ++ +Y + + ++
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM--KRAGIE 343
S+ G + ++++ ++ D +I AG +KA F + ++A I+
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
H + E N+ + +I C + Q+ +A ++ + D+V+ ++ ++
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQS 585
Query: 220 GHLDRAEEYFEEIRLLGEPLDKR--SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
G +DRA + E++ P+D S G+++ A AG ER + + + + I E
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
VY + + S+ G+ + A ++ ++ + PD+ +I G A ++A ++
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 338 KRAGI 342
K GI
Sbjct: 706 KSQGI 710
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 92/213 (43%), Gaps = 8/213 (3%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ ++ C +E A +L +++ G D + TT++ +K+G +D E F ++
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + ++G++I RAG + + ++ + V+ AL+ A G +
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA---CGQSG 586
Query: 294 GAQRVFDAI-----QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
R FD + + I PD G ++KA AGQ E+A+ ++ + + GI T
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
+ + K + A D++++ + E
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + N+ Y +++ K ++ A N+L M+ D VI T++ K H
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D A F+E+ G + +Y S+I+ G LL +M ++I + A
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A+++ D + I PD +I + M + +KA+ FE M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWF 391
P +++ + K ++ E ++ G +VG+ + ++ G F
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLF 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 78/190 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I K ++E+ + M RG + D V TT++ G D A++ F
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ G P D +Y ++ G E+ + + M EI +Y ++ +
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G + +F ++ L G+ P+ +I ++A + MK G P
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 350 GSVLVAYEKE 359
+++ A+ ++
Sbjct: 504 NTLIRAHLRD 513
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 93/215 (43%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ S + +I Y ++I+ H++L++A+ + M + D T++ + K+
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ E F E+ G D +Y ++I G + + + ++M + + Y
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL G E A VFD +Q + I D I +I+ AG+ + F ++ G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
++P +++ + L A L ++++G
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +I K+ L+EA +L M + G D V + +++ + K G A+E I
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+G + Y ++I R G + + E M + L+ + + G
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+ + GI+P+ +I YG +G+ KA F+ M + G PT GS+L
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 354 VAYEKESKLNTALEFLIDLE 373
K L A +FL L
Sbjct: 626 KGLCKGGHLREAEKFLKSLH 645
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ + I Y ++H+ K + + A +L MK +G D ++H ++ +
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+ ++R ++ +Y ++I + G LL EM + + + AL+
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ GN + A ++F ++ G+ P + G+++ + + AR + MKR G+
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV- 439
Query: 344 PTDRCIGSV-----LVAYEKESKLNTALEFLIDLEKEGI 377
C+G + + K L+ A+ L ++ K+GI
Sbjct: 440 ----CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K ++ EAE + M G + + V +++ Y +G +A F+E+ +G
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
+YGS++ + G E L+ + A + +Y LL A + GN A +F +
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 303 QLAGIIPD 310
I+PD
Sbjct: 680 VQRSILPD 687
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 85/210 (40%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
FE++ + + + + N EA M + G L ++H H++ A+
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
E+F + + G ++Y ++ + R + +EM R Y ALL A
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ G+ +G ++F + G+ PD + I AY AG A + MKR + P
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
++ K K++ A L ++ ++G
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + N+ Y +++ K + A N+L M+ D VI T++ K H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D A F+E+ G + +Y S+I+ G LL +M ++I + A
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A++++D + I PD ++ + M + +KA+ FE M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWF 391
P +++ + K ++ E ++ G +VG+ + ++ G F
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQGLF 446
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 94/215 (43%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ S + +I Y ++++ H++L++A+ + M + D V T++ + K+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ E F E+ G D +Y ++I G + + + ++M + + Y
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL G E A VFD +Q + I D I +I+ AG+ + F ++ G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
++P +++ + L A L ++++G
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ + +I Y+ ++ + +LE+A + M++ D I TTM+ KAG
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D + F + L G + +Y +MI+ + + +LL++M S Y
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV 317
L+RA+ R G+ + + ++ + D GLV
Sbjct: 581 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F VN+R +T++++ + ++ EA+ +L M + GF D V T ++ Y+ AG + A
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
+ ++R G + Y +I A + E + EM+ E A Y AL+ +
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ G + V D + G++P + ++ A+ E+ E M++ P
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 347 RCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
V+ K ++ A+ ++E+ G+ G + I+
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 122 SDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYC 181
+ LL W ++ K + A+++ V + E FE +I DYTN++
Sbjct: 256 TSLLYGWCRVGKMMEAKYVLV------------------QMNEAGFEPDIVDYTNLLSGY 297
Query: 182 GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK 241
++ +A ++L M++RGF + T ++ K ++ A + F E+ D
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 242 RSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
+Y ++++ + + G ++ +L++M + + Y ++ A+ + + E + +
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEK 417
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
++ PD I +VI+ G+ ++A + M+ G+ P
Sbjct: 418 MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 174 YTNIIHYCGKHNQLEEAENI-LTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
++ ++ CG L + RGF C + TM+ +Y K +D A + F+E+
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
D S+ +I AY R G E L E + +++ A + A++ +++
Sbjct: 211 ----PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA----WTAMVTGFAQNAKP 262
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDR-CIGS 351
+ A FD ++ +GI D+ I A G S+ A A + +++G P+D IGS
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGS 322
Query: 352 VLV-AYEKESKLNTALEFLIDLEKEGIM 378
L+ Y K + A+ + + + +
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+E FE ++ Y II+ K + EEA M+QR I ++++ L+
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A E+FE + G PL+ +Y +++ AY + E ++EM + + + Y +L
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
R+ ++ A V+ Q P ++++ + + + A ++ MK G+
Sbjct: 380 HHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
P S++ A E+KL+ A E+ ++ GI
Sbjct: 437 PGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 10/266 (3%)
Query: 104 CKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALL 163
CK L + F+ K V LLN + P E VLK+L L L V + A
Sbjct: 70 CKILTK----FTDSK--VETLLNEASVKLSPALIE--EVLKKLSN-AGVLALSVFKWAEN 120
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
++ F+ +Y +I GK Q + +++ MK + + + + Y++A +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVK 179
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A F ++ G ++ + M+ ++ + + ++M + + Y LL
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ + N V ++ G PD G++I A+ A + E+A F M++ +
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFL 369
P+ S++ E KLN ALEF
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFF 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%)
Query: 158 AEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
A H + E F++ D+ ++ K + +A+ + MK++ F D T ++ +
Sbjct: 184 AFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWG 243
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
+ +L R +E E++ G D +YG +I A+ +A E EM+ R
Sbjct: 244 QELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
++ +L+ A F+ + +G + ++ AY + + E A + M
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 338 KRAGIEPTDRCIGSVL 353
+ G+ P R +L
Sbjct: 364 RLKGVGPNARTYDIIL 379
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 12/236 (5%)
Query: 141 SVLKELETMEHPLYLEVAEHALLEESFEVN-IRDYTNII-----HYCGKHNQLEEAENIL 194
+V E+ +E +A+ L + E N ++ YT+I+ +C KH ++++A +
Sbjct: 184 NVYYEVSVLEEAKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFC-KHGKVKKALYTI 242
Query: 195 TAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254
+ ++ D L + I +A L A+ +I LD S ++ Y
Sbjct: 243 DILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNC 302
Query: 255 GMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
G+ S+ E+M + + E + ++R +++ G E A +F + G IPD ++
Sbjct: 303 GLANEAASVFEKMSEKNL----ETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLF 358
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRA-GIEPTDRCIGSVLVAYEKESKLNTALEFL 369
+ A GM G ++ + FE+M R GI P+ S++ Y L+ ALEF+
Sbjct: 359 RGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 139 WLSVLKELETMEHPLYLEVAEHAL-LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAM 197
W +++ E P + H L L+++ ++N + + C + LE I + +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 198 KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMP 257
K+ G + + + ++H+YSK G L+++ E F + E D + +MI G
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV----EKRDVFVWSAMIGGLAMHGCG 447
Query: 258 ERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA-GIIPDDKICGL 316
+ +M + + + A S G + A+ +F ++ GI+P++K
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
++ G +G EKA E M I P+ G++L A + + LN A
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMP---IPPSTSVWGALLGACKIHANLNLA 553
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 47/204 (23%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D + +++H Y G LD A + F I+ D S+ SMI +++ G P++ L
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 265 EEMDAREIYA--------------------GSEV---------------YKALLRAYSRI 289
++M++ ++ A G +V A+L Y++
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G+ E A+R+FDA++ D+ ++ Y ++ E AR +M + I +
Sbjct: 281 GSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN--- 333
Query: 350 GSVLVAYEKESKLNTALEFLIDLE 373
+++ AYE+ K N AL +L+
Sbjct: 334 -ALISAYEQNGKPNEALIVFHELQ 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
++ C K LE + + +++ + + M+ +Y+K G ++ A+ F+ +
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM---- 293
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQ 296
E D ++ +M+ Y + E +L M ++I A + AL+ AY + G A
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA----WNALISAYEQNGKPNEAL 349
Query: 297 RVFDAIQLAGIIPDDKICGL-VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
VF +QL + ++I + + A G E R +K+ GI +++
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 356 YEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
Y K L + E +EK + V SA++ G
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVW---SAMIGG 440
>AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:14722314-14723635 FORWARD
LENGTH=415
Length = 415
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 182 GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK 241
GK+ QLE E ++ M +G + + +V YS G LD+ E+ + ++ G +++
Sbjct: 163 GKNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEE 222
Query: 242 RSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
+++ AY++ R L ++ G+ ++ ++L +Y+ + QR F
Sbjct: 223 EEIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIG 282
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESK 361
+ AG PD + A+ + E+M+R I P G V+ AY + +
Sbjct: 283 MLDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAY-MDKR 341
Query: 362 LNTALEFL 369
L LEF+
Sbjct: 342 LARNLEFV 349
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 176 NIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL 235
+++ C + LE + I ++RGF+ + ++ +YSK G + +A + F ++
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM--- 302
Query: 236 GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
E D S+ +MI+ Y G EM ++ + LL A S +G +
Sbjct: 303 -EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Query: 296 QRVFDAI-QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
R FD + Q I P + G +I AG+ E+ A E K ++P + GS+L
Sbjct: 362 LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLER---AVEITKTMPMKPDSKIWGSLLS 418
Query: 355 AYEKESKLNTAL---EFLIDLEKE 375
+ L+ AL + L++LE E
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPE 442
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 13/224 (5%)
Query: 160 HALLEESFEV--NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
+ ++EE E+ N + +++ C + L + + + + G D ++T++ +Y
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 497
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
K G L+ A F +I ++ + ++I + G E+ L +EM +
Sbjct: 498 KCGRLEDALSLFYQI----PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQL-AGIIPDDKICGLVIKAYGMAGQSEKARIAFEN 336
+ LL A S G + Q F+ +Q GI P K G ++ YG AGQ E A +
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET---ALKF 610
Query: 337 MKRAGIEPTDRCIGSVLVAYEKESKLN---TALEFLIDLEKEGI 377
+K ++P G++L A ++ A E L ++E E +
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMV-----------HI-------YSKAGHLDR 224
KH + A +L + QR + ++L ++V H+ Y+KAG ++
Sbjct: 92 KHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIND 151
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
+ FE+IR G ++ ++ + ++ + + + ++M + A VY L+
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
A S+ G+ E A+++ ++ G+ PD +I Y +A + M+R+G+ P
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP 271
Query: 345 TDRCIGSVLVAYEKESKLNTA 365
S + + +E ++ A
Sbjct: 272 NIVTYNSFIHGFSREGRMREA 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 36/257 (14%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY------------- 216
NI Y ++H C K E+AE +L+ M+++G D T++ +Y
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 217 ----------------------SKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254
S+ G + A F EI+ + +Y ++I Y R
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRM 320
Query: 255 GMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
+ L E M++R G Y ++LR G A R+ + I PD+ C
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITC 380
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
+I AY A + M +G++ +++ + K +L A E L + +
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE 440
Query: 375 EGIMVGEEASAILAGWF 391
+G G + L F
Sbjct: 441 KGFSPGYATYSWLVDGF 457
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L ES N I+ C L +++ M + G D V T+ + +Y++ G+
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ A F+ + + S+ SMI A+ G+ E +M ++ + S + +
Sbjct: 363 IQMARTVFDMM----PERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVS 418
Query: 282 LLRAYSRIGNAEGAQRVFDAI-QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
LL A S GN + + F+++ + G++P+++ ++ G AG+ +A+ +NM
Sbjct: 419 LLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP-- 476
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEF---LIDLEKE 375
++P G++L A +++ A E L+ +E E
Sbjct: 477 -VKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPE 513
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + ++I ++N E + ++ M +G D V +T+++ S L + +
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
LG P D ++I Y++ G + E++ ++M + + + ++ Y
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT----WNLMIYGYGSH 656
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR-AGIEP 344
G+ A +FD ++ AG PDD +I A +G E+ + FE MK+ GIEP
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP 712
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L+E+ + ++ Y N+I+ K+++ +EAE L M G D T++ Y K G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+ AE + G D+ +Y S+I G R +L E + I +Y
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
L++ S G A ++ + + G+IP+ + +++ G A + M
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G P ++ Y + K+ ALE L + G+
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 2/213 (0%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
EV ++ E E + Y +I YC K ++ AE I+ GF+ DQ +++
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYC-KGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
G +RA F E G + Y ++I GM L EM + +
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
+ + L+ ++G A + + G PD ++I Y + E A
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
+ M G++P S+L K SK +E
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ Y+++I + + +A +L+ M +R + V + ++ + K G L +AE+ +
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 230 EE-IRLLGEP--------------LDKR--------------------SYGSMITAYIRA 254
EE I+ +P LD+ +Y ++I + +A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 255 GMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC 314
++G L EM R + + Y L+ + + + + AQ VF + G+ P+
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+++ G+ KA + FE ++R+ +EP
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 122 SDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYC 181
S L++A+VK K ++AE LY E +++ S + NI Y+++I+
Sbjct: 327 SALIDAFVKKGKLVKAE-------------KLYEE-----MIKRSIDPNIFTYSSLINGF 368
Query: 182 GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK 241
++L EA+ +L M ++ + + V T+++ + KA +D+ E F E+ G +
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 242 RSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
+Y ++I + +A + + + ++M + ++ Y LL + G A VF+
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
+Q + + PD ++I+ AG+ + I F
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 102/233 (43%), Gaps = 3/233 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + ++ Y +++ K + A N+L M+ + VI +T++ K H
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
D A F E+ G + +Y S+I+ G LL +M R+I + A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A+++++ + I P+ +I + M + +A+ E M R
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWFR 392
P +++ + K +++ +E ++ + G +VG + ++ G+F+
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG-LVGNTVTYTTLIHGFFQ 440
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N Y +I K + + A +L M +RG D V ++H +GH+D A
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
++ G D Y +++ + G + L EM R I + VY L+ + R
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G+ + A++VF G+ D +IK + +G ++A M + P
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 350 GSVLVAYEKESKLNTALEFLIDLEK 374
+++ Y K+ + TA++ +EK
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEK 583
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 139 WLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMK 198
W +++ ELE + L + + + F N +T+++ C L + + +
Sbjct: 282 WNTLISELERSDSSEALLMFQR-FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR---SYGSMITAYIRAG 255
+RGF + + ++ +Y+K G++ ++ R+ GE +D+R S+ SM+ Y G
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQ------RVFGEIVDRRNLVSWTSMMIGYGSHG 394
Query: 256 MPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL-AGIIPDDKIC 314
L ++M + I V+ A+L A G E + F+ ++ GI PD I
Sbjct: 395 YGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIY 454
Query: 315 GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
V+ G AG+ + A+E ++R +P + G++L A
Sbjct: 455 NCVVDLLGRAGKIGE---AYELVERMPFKPDESTWGAILGA 492
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 210 TTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDA 269
M+ Y G+ +A E ++++ +G D ++ S++ A + E+G+ + +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 270 REIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEK 329
+ + ALL YS+ GN + A R+F++I ++ ++I AYG GQ +
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS----WTVMISAYGSHGQPRE 494
Query: 330 ARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL-EKEGI 377
A F+ M++ G++P + +VL A ++ L+F + K GI
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ N+I G + I T + + G++CD V+ +++V +Y+K + + + F+E+
Sbjct: 110 FPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEM- 168
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D S+ ++I+ + ++G E+ L M++ S + A SR+ E
Sbjct: 169 ---PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
+ + G D+ + ++ YG E AR F+ M R +
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 5/189 (2%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L+ E+A +S+ NI ++H GK N+ A L MK+ G + TT+
Sbjct: 276 LFDEMARDGFSPDSYTYNI-----LLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+ S+AG+L+ + + +E+ G D Y MIT Y+ +G ++ + + EM +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
Y +++R G A + ++ G P+ + ++ AG+ +AR
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 333 AFENMKRAG 341
M + G
Sbjct: 451 VIREMVKKG 459
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 114 FSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRD 173
FS + + LL+ K KP+ A L T+ H + E + ++
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAA--------LTTLNH----------MKEVGIDPSVLH 326
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +I + LE + L M + G D V T M+ Y +G LD+A+E F E+
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ G+ + +Y SMI AG LL+EM++R VY L+ + G
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 294 GAQRV 298
A++V
Sbjct: 447 EARKV 451
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%)
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
Q + E + M + GF D + ++ + G +DR + F+E+ G D +Y
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
++ + P + L M I Y L+ SR GN E + D + A
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
G PD ++I Y ++G+ +KA+ F M G P S++ + A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 366 LEFLIDLEKEGIMVGEEASAILAGWFRK 393
L ++E G + L + RK
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRK 441
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 197 MKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGM 256
+ + G D ++ T+++ +Y K G +A + F + D SY +MI GM
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSAMIMGCGINGM 412
Query: 257 PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGL 316
SL M ++I + LL AYS G + + F++++ + P G+
Sbjct: 413 ATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI 472
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
++ G AG+ E+ A+E +K ++P G++L+A S L+ +EF
Sbjct: 473 MVDMLGRAGRLEE---AYELIKSMPMQPNAGVWGALLLA----SGLHNNVEF 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
+++ A AM Q+ + V TM+ Y+K G + AEE F RL+ + DK Y
Sbjct: 247 EMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELF---RLMSKK-DKLVYD 298
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSE--VYKALLRAYSRIGNAEGAQRVFDAIQ 303
+MI Y + G P+ L +M R Y + +++ A S++GN V I
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT 358
Query: 304 LAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
GI DD + +I Y G KA F N+ +
Sbjct: 359 EHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNK 394
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Query: 154 YLEVAEHA--LLEESFEVN----IRDYTNIIHYCGKHNQLEEAENILTAMKQR-GFICDQ 206
Y +AEHA L +E E+N ++ + ++ +L+EA + ++ G D
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 207 VILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE 266
V TM+ + G +D FEE+ G D S+ +++ + R + G+ + +
Sbjct: 194 VTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 267 MDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
M ++ + Y + +R +R A + D ++ GI PD +I AY +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 327 SEKARIAFENMKRAGIEP 344
E+ + MK G+ P
Sbjct: 314 LEEVMKCYNEMKEKGLTP 331
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 149 MEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVI 208
M H L E AL E + + + +I ++N EE N M + G + V
Sbjct: 311 MAHGLVKEAM--ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVT 368
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
L++++ + + +L +E G + S+I Y + G + + +
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
R + A + A++ AY+ G+++ A +FD +Q G PDD V+ A+ +G S+
Sbjct: 429 DRSLIA----WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 329 KARIAFENM-KRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
A+ F++M + IEP ++ + KL+ A+EF+
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFI 526
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 8/228 (3%)
Query: 139 WLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMK 198
W S+L ++ P + + +L E N ++ ++ C + +E I +M
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
+ G + +V +Y+K + A FE I +P + + + + Y++AG+PE
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV---DP-NTVCWTCLFSGYVKAGLPE 243
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVI 318
+ E M + ++ Y R+G + A+ +F + PD ++I
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMI 299
Query: 319 KAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
+G G A F NM+++ ++ T +GSVL A + L+ L
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSM 247
EEA M+ G + DQ T++ + S L I L LD+ + ++
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 248 ITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGI 307
I Y + G + + +EM R + +L+ Y++ G AE A ++FD+++ + I
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVS---WNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 308 IPDDKICGLVIKAYGMAGQSEKARIAFENM-KRAGIE 343
+PD+ V+ A AG+ R FE M + GIE
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 185 NQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY 244
NQ E +I M GFI D ++ ++V +YSK G L+ A + F+ ++ D ++
Sbjct: 369 NQGSEVHSIAVKM---GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTW 421
Query: 245 GSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL 304
SMIT Y +AG + L M + + ++ Y + G+ A +F ++
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 305 AGIIP-DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
G + + L+I Y G+ ++A F M+ + P I S+L A
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 4/182 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ I+ C +E + I + + + G + +++ +Y+K G LD A ++F +R
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D ++ S++ AY + G E L++EM+ I G + L+ Y+++G +
Sbjct: 244 ----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A + ++ GI D +I G +A F M AG+ P I S +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 354 VA 355
A
Sbjct: 360 SA 361
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D + T ++ +Y+K G + A + F+ +R + ++ +MI AY R L
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA 324
M + ++ +L+ + G+ E + + + G+ ++ ++ Y
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 325 GQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEAS 384
G+ + A F M+ + + SVL+AY + K A+E + ++EKEGI G
Sbjct: 230 GELDFATKFFRRMRERDVIAWN----SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 385 AILAGWFRK 393
IL G + +
Sbjct: 286 NILIGGYNQ 294
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 5/190 (2%)
Query: 180 YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPL 239
Y ++ L EAE L ++ Q+G + ++ +G + L EP
Sbjct: 55 YLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP- 113
Query: 240 DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
D +++ Y + G + + M R ++ + A++ AYSR ++F
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLF 169
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
+ G++PDD + +++ G E ++ + + G+ R S+L Y K
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 360 SKLNTALEFL 369
+L+ A +F
Sbjct: 230 GELDFATKFF 239
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 103/233 (44%), Gaps = 3/233 (1%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ + ++ Y +++ K ++ A N+L M+ + VI T++ K H
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ A + F E+ G + +Y S+I G LL M ++I + A
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ A+ + G A+++ + + I PD L+I + M + ++A+ F+ M
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA--SAILAGWFR 392
P + +++ + K ++ +E ++ + G +VG + I+ G+F+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG-LVGNTVTYTTIIQGFFQ 445
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 90/219 (41%), Gaps = 4/219 (1%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
NI+ Y +I+ K ++E+ + M QRG + + V TT++ + +AG D A+ F
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+++ P D +Y ++ G + + + + E+ +Y ++ +
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A +F ++ I PD +I ++A F MK G P
Sbjct: 517 GKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388
+++ A ++ + E + ++ G VG+ ++ L
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGF-VGDASTISLV 611
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
+++ Y + G+PE + E+ + + ++ A+L+AY++ + + +F ++L+G
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNL----GIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
+ P+ V+ A AG ++ R F+ MK + IEPTD+ S++ + +L AL
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 367 EFLIDL 372
E + ++
Sbjct: 374 EVITNM 379
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
L ++ Y ++G LD+ E +++ LG SY ++I + G+ L M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
+ + L+ + R + A +VF ++ + P+ +I Y G E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAIL 387
A +E+M GI+ +++ K++K A +F+ +L+KE ++ SA++
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 388 AG 389
G
Sbjct: 421 MG 422
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 90/215 (41%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ + N+ + +IH + +L+EA + MK + V T+++ YS+ G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A ++E++ G D +Y ++I + + ++E+D + S + AL+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
NA+ ++ ++ +G P+++ +++ A+ + A M R I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
R + V + + K + L ++E + +
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/191 (17%), Positives = 78/191 (40%)
Query: 187 LEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGS 246
L A + M + G + V T++H + +A L A + F E++ + + +Y +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
+I Y + G E E+M I Y AL+ + A + +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
++P+ +I + +++ +++M R+G P ++ ++ A+ + + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 367 EFLIDLEKEGI 377
+ L ++ + I
Sbjct: 469 QVLREMVRRSI 479
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 77/192 (40%)
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
+ A + MK GF+ + G +D A ++ E+R + +
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
+++ Y R+G ++G LL++M+ A Y L+ + G A ++ + + +
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
G+ P+ +I + A + ++A F MK + P +++ Y ++ A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 366 LEFLIDLEKEGI 377
F D+ GI
Sbjct: 363 FRFYEDMVCNGI 374
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 209 LTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
L ++ Y ++G LD+ E +++ LG SY ++I + G+ L M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
+ + L+ + R + A +VF ++ + P+ +I Y G E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAIL 387
A +E+M GI+ +++ K++K A +F+ +L+KE ++ SA++
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 388 AG 389
G
Sbjct: 421 MG 422
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 90/215 (41%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ + N+ + +IH + +L+EA + MK + V T+++ YS+ G +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A ++E++ G D +Y ++I + + ++E+D + S + AL+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
NA+ ++ ++ +G P+++ +++ A+ + A M R I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
R + V + + K + L ++E + +
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/191 (17%), Positives = 78/191 (40%)
Query: 187 LEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGS 246
L A + M + G + V T++H + +A L A + F E++ + + +Y +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
+I Y + G E E+M I Y AL+ + A + +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
++P+ +I + +++ +++M R+G P ++ ++ A+ + + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 367 EFLIDLEKEGI 377
+ L ++ + I
Sbjct: 469 QVLREMVRRSI 479
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 77/192 (40%)
Query: 186 QLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYG 245
+ A + MK GF+ + G +D A ++ E+R + +
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
+++ Y R+G ++G LL++M+ A Y L+ + G A ++ + + +
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 306 GIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
G+ P+ +I + A + ++A F MK + P +++ Y ++ A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 366 LEFLIDLEKEGI 377
F D+ GI
Sbjct: 363 FRFYEDMVCNGI 374
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y +I K ++E A LT M+ RG + V T + YS G + +
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E++ + G D ++ +I RA + +EM I Y L+R+
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G+ + + ++F ++ G+ PD I+++ + +KA + M R G++P +
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTY 603
Query: 350 GSVLVAYEKESKLNTALEFLIDLEKEG 376
+++ A + + + A E +E+ G
Sbjct: 604 STLIKALSESGRESEAREMFSSIERHG 630
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 77/175 (44%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + + +++ +L + GF D + + +++ +A + A + F
Sbjct: 459 NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF 518
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+ G ++ +Y +I + G +R L +M + Y A ++++ ++
Sbjct: 519 KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKM 578
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+ A+ + + G+ PD+ +IKA +G+ +AR F +++R G P
Sbjct: 579 RKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
CG+ +++A+ + ++ + I +M + +S+ G EYF ++ L P D
Sbjct: 397 CGR---IDDAKRVFERIENKSLIS----WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTD 449
Query: 241 KRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300
+ S S+I+A E GE + + + V +L+ Y + G E +RVFD
Sbjct: 450 EVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD 509
Query: 301 AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+ + +P + + I Y GQ +A F+ M AGI PT VL A
Sbjct: 510 TMVKSDEVPWNSM----ISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 27/259 (10%)
Query: 50 RFDSALVGIGMEEIVKEEVKDENHRRFRWTEIGHNITHEQNEAISKLPFKMTKRCKALMR 109
R D+ L +G+ + N + I N + LPF K L +
Sbjct: 470 RKDANLAAVGLAVVTTALCSQRN-----YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 110 QIICFSAEKGNVSDLLNAWVKIMK-----PIRAEWLSVLKELETMEHPLYLEVAEHALLE 164
+ N+ + L + V I++ P +L V+ EL A A+++
Sbjct: 525 E---------NIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND----RDAAFAIID 571
Query: 165 ESFEVNIRD----YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
E+ +R Y++II GK ++ EAE M + G D++ M++ Y++ G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+D A E EE+ +Y +I+ +++ GM E+G L++M + +Y
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 281 ALLRAYSRIGNAEGAQRVF 299
AL+ + + G+ + + +F
Sbjct: 692 ALIGHFLKKGDFKFSFTLF 710
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E F ++ Y +++ K N + A I+ AM++ G I ++++ K G +
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
AEE F ++ G D+ +Y MI Y R G + L+EE+ + S Y L+
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPD 310
+ ++G E + D + G+ P+
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPN 686
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHN--QLEEAENILTAMKQRGFICDQVI-LTTMVHIYSK 218
+L++ ++ YT I CG+ ++ +L M RGF + +I + M+ K
Sbjct: 318 MLDKGLSPDVITYT--ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G +D A F +++ G D +Y +I + G + L +EM + I S
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
+ ALL + G A+ + D++ +G D + +VI Y +G E+A F+ +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
GI P+ S++ Y K + A + L
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 174 YTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
Y II C QLE A I +K +G+ D+V+ TTM+ + + G L A + + E+
Sbjct: 286 YQKIIKGLCMNKKQLE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY-KALLRAYSRIGN 291
G ++ +Y MI + + G E+ EM R Y G+ + +++ + G
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM-LRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 292 AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGS 351
++ A +F + G+ P+ +IK + + EK ++ +K G++P+ G
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS----GM 459
Query: 352 VLVAYEKESKLNTALEFLIDLE 373
A + K++ ++ ++LE
Sbjct: 460 AYAALVRNLKMSDSVATSLNLE 481
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 8/190 (4%)
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
+RGF D + T ++ +Y++ G LD + F I D +M+TA R G
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP----DFVCRTAMVTACARCGDVV 191
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVI 318
L E M R+ A + A++ Y+++G + A VF +QL G+ + V+
Sbjct: 192 FARKLFEGMPERDPIA----WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 319 KAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
A G ++ R A ++R I+ T R +++ Y K + A+E +E++ +
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 379 VGEEASAILA 388
A LA
Sbjct: 308 TWSSALNGLA 317
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHN--QLEEAENILTAMKQRGFICDQVI-LTTMVHIYSK 218
+L++ ++ YT I CG+ ++ +L M RGF + +I + M+ K
Sbjct: 318 MLDKGLSPDVITYT--ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 219 AGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEV 278
G +D A F +++ G D +Y +I + G + L +EM + I S
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 279 YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
+ ALL + G A+ + D++ +G D + +VI Y +G E+A F+ +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 339 RAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
GI P+ S++ Y K + A + L
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 140 LSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQ 199
+S+L+ + E PL + ++ +E N +++I + +++A +L +M
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 200 RGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSY--GSMITAYIRAGMP 257
+ D V +TM+ + AG D A F +R + S ++A +R
Sbjct: 392 K----DVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKW 447
Query: 258 ERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV 317
G ++ + +I G+ +++ AY++ G E A+R FD I II ++
Sbjct: 448 AHGIAIRRSLAINDISVGT----SIVDAYAKCGAIEMARRTFDQITEKNIIS----WTVI 499
Query: 318 IKAYGMAGQSEKARIAFENMKRAGIEP 344
I AY + G +KA F+ MK+ G P
Sbjct: 500 ISAYAINGLPDKALALFDEMKQKGYTP 526
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 161 ALLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
+L+ E E N + +I YC + +L ++ +L GF+ D V +T ++ +
Sbjct: 238 SLMSEMKEPNDVTFNILISAYCNEQ-KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
G + A E E + G +D + +++ Y G + EM+ + E Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ Y +G + A F+ ++ I + +I+ + G+++ E M+
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 340 ------AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
A I+P + V+ + KE++ ALEFL+ +EK
Sbjct: 417 SDTVHGARIDPYN----CVIYGFYKENRWEDALEFLLKMEK 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 4/246 (1%)
Query: 132 MKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAE 191
+KP + S+L L + + E ++ ++ Y ++ N++ +
Sbjct: 143 IKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGF 202
Query: 192 NILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAY 251
+L MK G + V+ T++H K G + RA E++ EP D ++ +I+AY
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK---EPNDV-TFNILISAY 258
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
+ LLE+ + ++ G A V + ++ G D
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 312 KICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLID 371
C ++K Y G+ A+ F M+R G P ++ Y L++AL+ D
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 372 LEKEGI 377
++ + I
Sbjct: 379 MKTDAI 384
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
+ +I GK L+ A + M ++ D+V T M+ +YS+ G A + F E+
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA--LLRAYSRIGNA 292
G D + ++++A G E G+ + E A E+ +Y A L+ Y + G
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQI--ETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
E A RVF+A+ + ++ +I AY G +++A + F+ M + P+D V
Sbjct: 386 EEALRVFEAMP----VKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGV 438
Query: 353 LVA 355
L A
Sbjct: 439 LSA 441
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+L + E ++ ++I K Q+ A + + +R D V +M+ YS+AG
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAG 212
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMD-AREIYAGSEVY 279
+ A + F ++ G D+R+ SM+ A G G LLEEM ++I + +
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLG 271
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKIC-GLVIKAYGMAGQSEKARIAFENMK 338
L+ Y + G+ + A+RVF+ +I D++ +I Y G+S +A F M+
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQ-----MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 339 RAGIEPTDRCIGSVLVA 355
+ G+ P + +VL A
Sbjct: 327 KTGVSPDAGTLSTVLSA 343
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y + C K ++ ++ +++ + G D I +++ +Y+K G + A + F+EI
Sbjct: 135 YNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI- 193
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D S+ SMI+ Y AG + L +M+ ++L A S +G+
Sbjct: 194 ---TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 294 GAQRVFDAIQLAGIIPDDKICGL-VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
R+ + + + I G +I YG G + AR F M + DR +
Sbjct: 251 TG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK-----KDRVAWTA 304
Query: 353 LVA-YEKESKLNTALEFLIDLEKEGI 377
++ Y + K + A + ++EK G+
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGV 330
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+ +E N+ ++ +I+ K+N E+A ++ MK+ G + ++ ++ +++ + G
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
L+ E +E + ++ +++ + R G E+ + E + + + S + K
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR-A 340
L + G+A A F + G IP D V+ A G EK +ENMK+
Sbjct: 325 L----AVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDH 380
Query: 341 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDLE 373
GIEP G ++ + KL A F++ +
Sbjct: 381 GIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 413
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 201 GFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERG 260
GF D + ++VH+Y+ G + A F ++ D S+ SM+ Y + GM E
Sbjct: 147 GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTSMVAGYCKCGMVENA 202
Query: 261 ESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKA 320
+ +EM R ++ + ++ Y++ E A +F+ ++ G++ ++ + VI +
Sbjct: 203 REMFDEMPHRNLFT----WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISS 258
Query: 321 YGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
G E A+E + ++ + + +G+ LV
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMT-VNLILGTALV 291
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
NI + +++ K L+EA+++ +M +R DQ +MV +++ + A YF
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESL-LEEMDAREIYAGSEVY--KALLRAY 286
+ G L++ S+ S+++A +G+ + + + + + A+ + S+VY AL+ Y
Sbjct: 141 AMMHKEGFVLNEYSFASVLSAC--SGLNDMNKGVQVHSLIAKSPFL-SDVYIGSALVDMY 197
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
S+ GN AQRVFD + ++ + + I + G + +A F+ M + +EP +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSL----ITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 347 RCIGSVLVAYEKESKLNTALE 367
+ SV+ A S + E
Sbjct: 254 VTLASVISACASLSAIKVGQE 274
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 32/181 (17%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRS---YGSMITAYIRAGMPERGE 261
D + T+M+H K G +D A E F+E + +RS + +M+T Y G R +
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDE-------MSERSVITWTTMVTGY---GQNNRVD 220
Query: 262 SLLEEMDAREIY----AGSEV-YKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGL 316
DAR+I+ +EV + ++L Y + G E A+ +F+ + + +I C
Sbjct: 221 ------DARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA----CNA 270
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
+I G G+ KAR F++MK E D +V+ +E+ AL+ I ++K+G
Sbjct: 271 MISGLGQKGEIAKARRVFDSMK----ERNDASWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 377 I 377
+
Sbjct: 327 V 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
T++IH K +++EA I M +R I TTMV Y + +D A + F+ +
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFD---V 228
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
+ E + S+ SM+ Y++ G E E L E M + + A + A++ + G
Sbjct: 229 MPEKTEV-SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN----AMISGLGQKGEIAK 283
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+RVFD+++ +D VIK + G +A F M++ G+ PT + S+L
Sbjct: 284 ARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L E F +++ Y +I +C K+N E+ +LT M++ G D + T++ + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNT-EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR-EIYAGSEVY 279
+ E E++R G +YG++I AY G + L ++M ++ + +Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ A+S++GN A + + +++ + P+ + + K Q E + M
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 340 AGIEPT 345
EP
Sbjct: 716 QSCEPN 721
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 85/209 (40%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ + N+ I+ +H+ L A M++ G + V T++H +++
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+A ++E++ G D + Y ++I+ + ++E++ Y L+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ N E + ++ G PD +I +G E E M+ G++
Sbjct: 554 GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDL 372
PT G+V+ AY +L+ AL+ D+
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
+ +E ++R Y +I K Q + +++ AM+++ + + M Y++A +D
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVM-RKYARAQKVD 185
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A F + P + ++ +++A ++ + + + E M R S+ Y LL
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILL 244
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ + N A+ VF + AG PD +++ AG+ ++A +M + +
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 344 PTDRCIGSVLV-AYEKESKLNTALEFLIDLEKEGIMVGEEASAILAGWFRK 393
PT I SVLV Y E++L A++ +++E+ G+ L G F K
Sbjct: 305 PTT-FIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y+ ++H G N+LEEA + M++ G D + +++ + KA + +E++
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
G + +S ++ I G + + +M + ++ Y +++ + E
Sbjct: 370 SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEME 428
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG--- 350
A +V+ ++ G+ P ++I ++KA + E M GI P+ G
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLR 488
Query: 351 SVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
+L+ E+E L+FL EK ++V E
Sbjct: 489 QLLIKEERED----VLKFLN--EKMNVLVNE 513
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
+I Y+ ++ K +++EA I+ +M I + +VH Y L+ A + F
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G D + S+I A+ +A + +L+EM ++ + S+ +LR
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
G + A VF + + PD +VIK + + E A ++ M++ G+ P+
Sbjct: 391 GEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + ++ K + +A+ + M+ R F D + ++ + K +L +A E F
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E+ G D +Y M+ +AG + ++ MD + +Y L+ Y
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
E A F ++ +G+ D + +I A+ A + + + MK G+ P +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 350 GSVL 353
+L
Sbjct: 381 NIIL 384
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L E F +++ Y +I +C K+N E+ +LT M++ G D + T++ + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNA-EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR-EIYAGSEVY 279
+ E E++R G +YG++I AY G + L ++M ++ + +Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ A+S++GN A + + +++ + P+ + + K Q E + M
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 340 AGIEPT 345
EP
Sbjct: 716 QSCEPN 721
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 86/209 (41%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ + N+ I+ +H+ L A M++ G + V T++H +++
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+A ++E++ G D + Y ++I+ + ++E++ Y L+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ NAE + ++ G PD +I +G E E M+ G++
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDL 372
PT G+V+ AY +L+ AL+ D+
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 156 EVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHI 215
+++E L+E+ I + ++H+ + +L A+ IL +M +G D + T++
Sbjct: 421 QISEKKLVED-----IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 216 YSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG 275
Y K G L+RA E ++ + + + + Y S++ + GM E+++ M+ ++I
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT- 534
Query: 276 SEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLV-----IKAYGMAGQSEKA 330
Y LL + GN E A + +Q +K LV I G EKA
Sbjct: 535 ---YNTLLNESLKTGNVEEADDILSKMQKQ---DGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 331 RIAFENMKRAGIEPTDRCIGSVLVAYEK 358
+ + M G+ P G+++ ++ K
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
+ V ++++ + KAG LD AE ++ G ++R+YG+++ AY RAG + L
Sbjct: 290 NAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
+EM ++ + + +Y +++ G+ EGA V
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 154 YLEVAEHALLEESFEV----NIRDYTNIIHYCGKHNQLEEAENILTAMK-QRGFICDQVI 208
Y+E E E+FE NI + II + + EEA + +M+ Q G D V
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV- 471
Query: 209 LTTMVHIYSKAGHL---DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLE 265
TM+ I S GHL D A+ + I G LD R +++ + R G PE S+
Sbjct: 472 --TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
+ R++ A + A + A + GNAE A +FD + G+ PD + A G
Sbjct: 530 SLTNRDVSA----WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 326 QSEKARIAFENM-KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
++ + F +M K G+ P D G ++ + L A++ + D+ E
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 15/239 (6%)
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
E +++ + Y N++ + +EE + + T M + D T+V+ Y K G++
Sbjct: 112 FEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
A++Y + G D +Y S IT + R + + +EM + Y L
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG------LVIKAYGMAGQSEKARIAFEN 336
+ A+++ +A+ L + DD C ++I A +GQ +A F+
Sbjct: 232 IYGLFE------AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 337 MKRAGIEPTDRCIGSVLV-AYEKESKLNTALEFLIDLEKEGIMVGE-EASAILAGWFRK 393
M +GI+P D C+ +VL+ ++ L+ A L + + G+M +A++ G+ +K
Sbjct: 286 MSESGIKP-DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 16/259 (6%)
Query: 93 ISKLPFKMTKRCK----ALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELET 148
+ K+ M K C AL C + KG D K+ LS L
Sbjct: 79 VPKITILMIKSCNSVRDALFVVDFCRTMRKG---DSFEIKYKLTPKCYNNLLSSLARFGL 135
Query: 149 MEHP--LYLEVAEHALLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICD 205
+E LY E +LE+ +I + +++ YC K + EA+ +T + Q G D
Sbjct: 136 VEEMKRLYTE-----MLEDLVSPDIYTFNTLVNGYC-KLGYVVEAKQYVTWLIQAGCDPD 189
Query: 206 QVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLE 265
T+ + + + +D A + F+E+ G ++ SY +I A + SLL
Sbjct: 190 YFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV 249
Query: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
+M Y L+ A G A +F + +GI PDD + ++I+++
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 326 QSEKARIAFENMKRAGIEP 344
++A E+M G+ P
Sbjct: 310 TLDEASGLLEHMLENGLMP 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+R YT +I Q EA N+ M + G D + T ++ + LD A
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E + G + +Y ++I + + + + LL +M + + Y L+
Sbjct: 319 EHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 290 GNAEGAQRVFDAIQLAGIIPDDK 312
GN + A R+ ++ +G++P+ +
Sbjct: 378 GNLDSAYRLLSLMEESGLVPNQR 400
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L + + N YT ++ K ++E+ + MK+ G+ D +V K G
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 222 LDRAEEYFEE-IRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+ A E E +R D SY +++ Y + G + + LLEE++ + + +
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK-R 339
++ IGN GA++ I G+ P C +I AG ++A F +M+ R
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAG 389
T SV+ K+ +L A + L+ +G+ + A A+L+G
Sbjct: 394 DEFTYT-----SVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 35/229 (15%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K LE AE +L + G + D + T++ Y++ +D A +R G D
Sbjct: 25 KFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVT 84
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG-NAEGAQRVFDA 301
+Y S+I+ + M R L +EM + Y L+ Y ++G + E + + +
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSE---------KARIAFENM--------------- 337
I LAG++P +++ A +G ++ K+R+ E M
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRV 204
Query: 338 ----------KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
K++G P ++L Y K ++ L+ + ++KEG
Sbjct: 205 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 154 YLEVAEHALLEESFEV----NIRDYTNIIHYCGKHNQLEEAENILTAMK-QRGFICDQVI 208
Y+E E E+FE NI + II + + EEA + +M+ Q G D V
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV- 471
Query: 209 LTTMVHIYSKAGHL---DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLE 265
TM+ I S GHL D A+ + I G LD R +++ + R G PE S+
Sbjct: 472 --TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
+ R++ A + A + A + GNAE A +FD + G+ PD + A G
Sbjct: 530 SLTNRDVSA----WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 326 QSEKARIAFENM-KRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
++ + F +M K G+ P D G ++ + L A++ + D+ E
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D I+++++ +YSK G + A + F + LGE D + +MI+ Y + +L+
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSD---LGEQ-DLVVFNAMISGYANNSQADEALNLV 206
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA 324
++M I + AL+ +S + N E + + + L G PD +I
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 325 GQSEKARIAFENMKRAGIEPTDRCIGSVL-----VAYEKESKLNTALEFLIDLEKEGIM 378
Q+EKA AF+ M G+ P I ++L +AY K K + LE G +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 207 VILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE 266
V +M+ Y+ G D+A E F+++ GE LD ++ +++TA AG+ + G++L
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLL 414
Query: 267 MDAR-EIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
M + I E Y ++ R G A + A+++ PD + G ++ A G
Sbjct: 415 MQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLAACRNHG 471
Query: 326 QSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
E ARIA +++ A +EP + G +L +
Sbjct: 472 NMELARIAAKHL--AELEPENSGNGLLLTS 499
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 122/293 (41%), Gaps = 31/293 (10%)
Query: 61 EEIVKEEVKDENHRRFRW----------TEIGHNITHEQNEAISKLPF--KMTKRCKALM 108
+ +VK +K+ N+ R W +E H I+ + I+++ KM + + L
Sbjct: 3 QSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELH 62
Query: 109 RQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFE 168
I+ S +K +S LL+ +S+ + ++ + L+ F
Sbjct: 63 NLILSSSIQKTKLSSLLSV------------VSIFAKSNHIDKAF----PQFQLVRSRFP 106
Query: 169 VN---IRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA 225
N + Y ++ C K ++E + M G ++ + +D A
Sbjct: 107 ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
E F+E+ G ++ ++G ++ Y +AG+ ++G LL M++ + +Y ++ +
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
+ R G + ++++ + ++ G++PD I A G+ A F +M+
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 4/217 (1%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFI----CDQVILTTMVHIYSKA 219
EE +I + + I K ++ +A I + M+ ++ + + M+ + K
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
G L+ A+ FE IR + +SY + +R G E++L++M + I Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
L+ ++G A+ + ++ G+ PD G ++ Y G+ + A+ + M R
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
P +L + K +++ A E L + ++G
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 184 HNQLEEAEN-ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
H +++E N IL++ Q+ + L ++V I++K+ H+D+A F+ +R P +K
Sbjct: 55 HEEIQELHNLILSSSIQKTKLSS---LLSVVSIFAKSNHIDKAFPQFQLVRSRF-PENKP 110
Query: 243 S---YGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF 299
S Y ++ + I+ E L ++M I + + L+RA + A+ +F
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 300 DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKE 359
D + G P++ G++++ Y AG ++K M+ G+ P +++ ++ +E
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 360 SKLNTALEFLIDLEKEGIM 378
+ + + + + + +EG++
Sbjct: 231 GRNDDSEKMVEKMREEGLV 249
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 94/245 (38%), Gaps = 41/245 (16%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L E+ + L ++ NI ++H K ++ EAE +L M ++G+ D V +
Sbjct: 418 LLQEMMRNNCLPNAYTCNI-----LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPL-----------------------DKRSYGSMIT 249
V +G LD+A E + +R+ G D +Y +++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 250 AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
+AG ++L EM ++ S Y + + + G A RV ++ G
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
+ +I G+ Q + + MK GI P + Y NTA+++L
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN-------ICTY------NTAIQYL 639
Query: 370 IDLEK 374
+ EK
Sbjct: 640 CEGEK 644
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 2/209 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ Y ++I + +A +++ M +R D ++ K G + AEE++
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 230 EE-IRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
EE IR +P D +Y +I + E + M ++ + Y L+ Y +
Sbjct: 280 EEMIRRSLDP-DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
E ++F + G++ + ++I+ Y AG+ A F M G+ P
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+L K+ AL L D++K G+
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 94/220 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
++ S + +I Y+ +I+ +++L+EAE + M +G D V + +++ Y K+
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
++ + F E+ G + +Y +I Y RAG E + M ++ Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL G E A + +Q G+ D ++I+ AG+ A + ++ G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
+ P ++++ K+ A ++++GI+ E
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F +++ T +I + ++ EA + M +R D + TTMV Y + +D A
Sbjct: 900 FGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSAN 955
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAY 286
++ E + +I Y+ G E+ ESL +M ++I + + +++ Y
Sbjct: 956 SLANQMSEKNEA----TSNCLINGYMGLGNLEQAESLFNQMPVKDIIS----WTTMIKGY 1007
Query: 287 SRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
S+ A VF + GIIPD+ VI A G E + + G D
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-VLD 1066
Query: 347 RCIGSVLV-AYEKESKLNTALEFLIDLEKEGIM 378
IGS LV Y K L AL +L K+ +
Sbjct: 1067 VYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 100 MTKRCKALMRQII--CFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEV 157
+ + C+ LM Q I C S ++ +++ ++ ++ +P + ++ K T HP+
Sbjct: 801 LNQDCR-LMNQFITACTSFKRLDLA--VSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 857
Query: 158 AEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYS 217
+L +S + Y++++ ++ E++ + + GF I TT++ YS
Sbjct: 858 LYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYS 915
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
G + A + F+E+ D ++ +M++AY R + SL +M +
Sbjct: 916 ATGRIREARKVFDEM----PERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEA 967
Query: 278 VYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
L+ Y +GN E A+ +F+ + + II +IK Y + +A F M
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIIS----WTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 338 KRAGIEPTDRCIGSVLVA 355
GI P + + +V+ A
Sbjct: 1024 MEEGIIPDEVTMSTVISA 1041
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 143 LKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAM--KQR 200
L++++ +H L E+ E +++E ++ DY + K L AE M + R
Sbjct: 103 LRKIKRYKHAL--EICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMR 160
Query: 201 GFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERG 260
G T+++H Y + D+AE FE++ G Y M++ YI G E+
Sbjct: 161 G----HAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKV 216
Query: 261 ESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKA 320
L++E+ R Y L A++ + EGA++V+ + + PD ++
Sbjct: 217 PVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNL 275
Query: 321 YGMAGQSEKARIAFENMKR 339
Y EKAR+A + M++
Sbjct: 276 YAKTDNVEKARLALKEMEK 294
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
TN+I + +++EA I M++R + V TTM+ Y + +D A + FE +
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFE---V 228
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEG 294
+ E + S+ SM+ Y +G E E E M + + A + A++ + +G
Sbjct: 229 MPEKTEV-SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN----AMIVGFGEVGEISK 283
Query: 295 AQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A+RVFD ++ D+ +IKAY G +A F M++ G+ P+ + S+L
Sbjct: 284 ARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
++ +T+I+ + L+ A M R D++ T M+ Y +AG + + E F
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIF 356
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
E++ G D+ + S++TA G E GE + +D +I V AL+ Y +
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 290 GNAEGAQRVF-DAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
G +E AQ+VF D Q + GL GQ ++A F M+ I+P D
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGL-----ANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 349 IGSVLVAYEKESKLNTALEFLIDLEKE 375
VL A ++ A +F + +
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSD 498
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 166 SFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA 225
SF+V + Y ++ C + + + + M GF +Q ++ ++ ++ K G + A
Sbjct: 118 SFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
F+EI + SY S+I+ ++ G L + M + + +LRA
Sbjct: 178 RRLFDEI----PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRA 233
Query: 286 YSRIGNAE-GAQRVFDAIQLAGIIPDDKI-CGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ +G+ G Q A++L G++ + + CGL I Y G E AR AFE M E
Sbjct: 234 SAGLGSIYVGKQLHVCALKL-GVVDNTFVSCGL-IDMYSKCGDIEDARCAFECMP----E 287
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAIL 387
T +V+ Y AL L D+ G+ + + +I+
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 110/241 (45%), Gaps = 15/241 (6%)
Query: 133 KPIRAEWLSVLKELETMEHPLYLEVAEHALLEESF--EVNIRDYTNIIHYCGKHNQLEEA 190
+P ++S ++ L ++ L + H ++ ++R Y ++ ++ + E +
Sbjct: 13 RPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV---SRYLRKEVS 69
Query: 191 ENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITA 250
++ MK+R F + + ++ IY G +A EEIR +G P+D Y S+I
Sbjct: 70 WRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDT 129
Query: 251 Y---------IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
+ ++ G E L+ ++ ++ + + ++ L AY++ G + +V
Sbjct: 130 FGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKM 189
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR-AGIEPTDRCIGSVLVAYEKES 360
++ GI P+ + ++I A+G AG+ +A + ++K I P +++ A+ +
Sbjct: 190 MENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAK 249
Query: 361 K 361
K
Sbjct: 250 K 250
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y N+I C + LEE + + ++ GF+ VI ++ +Y+K G L A + F+E+
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM- 146
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D S+ M+ Y G+ E L +EM ++ Y+ + A++ Y + E
Sbjct: 147 ---PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS----WTAMVTGYVKKDQPE 199
Query: 294 GAQRVFDAIQ 303
A ++ +Q
Sbjct: 200 EALVLYSLMQ 209
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 176 NIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL 235
N+ CGK ++EAE + M +R IC TTMV +++AG +A E++ E++
Sbjct: 159 NLYMKCGK---MDEAEVLFGKMAKRDVIC----WTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 236 GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
G D+ ++ A G + G S+ + + V +L+ Y+++G E A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
RVF + + G +I + G + KA A M+ G +P + VLVA
Sbjct: 272 SRVFSRMMFKTAVS----WGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 356 YEKESKLNTA 365
+ L T
Sbjct: 328 CSQVGSLKTG 337
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 3/238 (1%)
Query: 139 WLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMK 198
+ S+L L ++ V + + F V + DY I++ K+ E AE ++ +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR--LLGEPLDKRSYGSMITAYIRAGM 256
+ GF+ D I T+++ + + +L A + F+ + + P + SY +I G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP-NSVSYSILIHGLCEVGR 281
Query: 257 PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGL 316
E L ++M + + Y L++A G + A +FD + G P+ +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 317 VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEK 374
+I G+ E+A M + I P+ +++ Y K+ ++ A E L +EK
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YT II+ + ++EEAE +L+AM+ G + V T MV Y G LDRA E
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 230 EEIRLLGEPLDKRSYGSMITAYI--RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYS 287
+ G L+ R Y S++ ++ + G+ ES + ++ RE E L+
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE--TDPECINELISVVE 732
Query: 288 RIGNAEGAQRVFDAIQLA 305
++G +F +L
Sbjct: 733 QLGGCISGLCIFLVTRLC 750
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 7/227 (3%)
Query: 168 EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA-- 225
E + +T II+ K + + A L M ++G D+V TT++ K G A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 226 -EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
E ++R+L P S ++ + + ++L +++ + Y L+
Sbjct: 533 ILETLVKMRILTTP---HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
R G+ G+ R+ + ++L+G +P+ ++I G+ E+A M+ +G+ P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGW 390
++ Y KL+ ALE + + + G + + S++L G+
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 79/200 (39%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N Y+ +IH + +LEEA + M ++G T ++ G +D+A F
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+E+ G + +Y +I R G E + +M I+ Y AL+ Y +
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G A + ++ P+ + +++ G+ KA + M G+ P
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 350 GSVLVAYEKESKLNTALEFL 369
++ +E +NTA + L
Sbjct: 445 NVLIDGLCREGHMNTAYKLL 464
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 3/216 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ Y N++ A +++ M + G + IL +++H + D +
Sbjct: 376 YEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMC 435
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ ++ S+I R E ++L + + S ++ +L Y R N
Sbjct: 436 TKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVS 495
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A V ++ AG+ PD G +I Q + +E MK+AG++ T R S++
Sbjct: 496 SALMVVKQMKEAGVKPDSITFGYLINN---CTQEDAITKYYEEMKQAGVQATKRIYMSLI 552
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGEEASAILAG 389
AY K A + L+D + I E S +++
Sbjct: 553 DAYAASGKFEKAKQVLVDPDVPAINQNELKSVLISA 588
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 144 KELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFI 203
K + H ++ ++ +SF + + + N+I EAE + M G
Sbjct: 246 KNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI------GSPREAERVWMEMGNVGVK 299
Query: 204 CDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESL 263
D V ++M+ YSK G L++ + F+ ++ D++ Y +++ A +A +L
Sbjct: 300 HDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL 359
Query: 264 LEEMDARE-IYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYG 322
++ M+ + I Y +L++ + E A++VFD + G+ P I+ Y
Sbjct: 360 MKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-------TIRTYH 412
Query: 323 ----MAGQSEKARIAFENMKRAGIEPT 345
+ E+ M++ G EPT
Sbjct: 413 AFMRILRTGEEVFELLAKMRKMGCEPT 439
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 210 TTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI-RAGMPERGESLLEEMD 268
+MV + AG LD A E F + PL K Y ++ T+ + + LL+ M
Sbjct: 536 ASMVKGFCAAGCLDHAFERFIRLEF---PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
+ +Y L+ A+ R+ N A+ F+ + I+PD ++I Y + +
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 329 KARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALE 367
+A FE+MKR ++P D SVL+ + E + +E
Sbjct: 653 QAYALFEDMKRRDVKP-DVVTYSVLLNSDPELDMKREME 690
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+T C + + + +A+++L M + G ++ + ++ + + ++ +A E+FE +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D +Y MI Y R P++ +L E+M R++ Y LL + + + +
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL-DMK 686
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
FD +IPD ++I Y +K F++MKR I P D +VL
Sbjct: 687 REMEAFD------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVP-DVVTYTVL 739
Query: 354 VAYEKESKLN 363
+ + E L+
Sbjct: 740 LKNKPERNLS 749
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 43/214 (20%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
I+ C + L + + GFI D + T++ Y+K G L A F EI L
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-- 371
Query: 237 EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI------------------------ 272
D SY S+IT + PE L EM I
Sbjct: 372 --KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 273 ----------YA-GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAY 321
YA + + AL+ Y++ G + A+RVFD + I+ + + + +
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTM----LFGF 485
Query: 322 GMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
G+ G ++A F +M+ G+ P + + ++L A
Sbjct: 486 GIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEE-IR 233
T ++ + GK + LE+A +L M ++ + V T M+ YS+ GH A F E +R
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEK----NVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 234 LLGEPLDKRSYGSMITAYIRA---GMPERGESLLEEMDA-REIYAGSEVYKALLRAYSRI 289
G+P ++ ++ +++T+ IRA G+ ++ L+ + + I+ GS +LL Y++
Sbjct: 147 SDGKP-NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS----SLLDMYAKA 201
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCI 349
G + A+ +F+ + ++ C +I Y G E+A F + G+ P
Sbjct: 202 GQIKEAREIFECLPERDVVS----CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
Query: 350 GSVLVA 355
S+L A
Sbjct: 258 ASLLTA 263
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 168 EVNIRDYTNIIHYCG--KHNQLEEAENILTAMKQRGF-ICDQVILTTMVHIYSKAGHLDR 224
EV I + T +H + +Q+E A + + M + G + LT +V + G + R
Sbjct: 169 EVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITR 228
Query: 225 AEEYFEEIRLL-GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A E EE+ L+ G + ++ SMI ++ E + +L+ M+ + + YK L+
Sbjct: 229 ARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLI 288
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
++ G E A+R+ + + + + L++ Y G EK + M G+
Sbjct: 289 DGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVT 348
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGEEASAILA 388
P ++ K K+ A+ FL +L + EE + L+
Sbjct: 349 PNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLS 393
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVH 214
L++ + +ES +++ Y +I + ++EEAE ++ M + + + +++
Sbjct: 265 LDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMN 324
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
YS+ G +++ E + E+ G +K +Y ++ +AG S L E+ E
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI 384
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
E+Y L R+G + + V + G IP IC + + + E A++
Sbjct: 385 DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKE-AQMLI 443
Query: 335 ENMKRAGIEP 344
+ + GI+P
Sbjct: 444 TIVVKCGIKP 453
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ ++ K + A ILT +GF+ D+ + ++ + + +D+A + F E+
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEME 471
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ S+I G E GE L+ M R I +++Y AL++A+ +IG+
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKT 531
Query: 294 GAQRVFD 300
A RV++
Sbjct: 532 NADRVYN 538
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRG-------FIC---------- 204
+L+ F N YT + C + ++EAE +L+ M++ G F C
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 205 -------DQVILTT-----------MVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGS 246
+V++T MV SK +++RA E + G D+ +Y
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 247 MITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAG 306
+I +I ++ L EM+ R++ G EV+++L+ G E ++ ++
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 307 IIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
I P+ I +IKA+ G A + M
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 133 KPIRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAEN 192
K + A LS EL +E + + ++ F ++ +++ K LE+A
Sbjct: 430 KIVTASVLSASAELTLLE---FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANV 486
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR-LLGEPLDKRSYGSMITAY 251
I +M+ R D + T ++ Y+K G L+ A+ YF+ +R + G Y MI +
Sbjct: 487 IFNSMEIR----DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLF 542
Query: 252 IRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
R+G + E LL +M E+ + V+KA+L A + GN E +R A L + P++
Sbjct: 543 GRSGDFVKVEQLLHQM---EVEPDATVWKAILAASRKHGNIENGERA--AKTLMELEPNN 597
Query: 312 KICGLVI-KAYGMAGQSEKARIAFENMKRAGIEPTDRC 348
+ + + Y AG+ ++A MK I C
Sbjct: 598 AVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGC 635
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+ +E ++ + ++ GK +++EA ++L M ++ ++V T ++ Y+K+G
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYAKSGR 230
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A E F+ + + D+ + ++++A G E GE + +D R + + A
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
++ Y++ GN A VF+ + ++ I I G +A F M +AG
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTI----IAGLATHGHGAEALAMFNRMVKAG 346
Query: 342 IEPTDRCIGSVLVA 355
+ P D ++L A
Sbjct: 347 VRPNDVTFIAILSA 360
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 103/232 (44%), Gaps = 1/232 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ E +I +++++ N +++A + M++ G D V+ T ++ K
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ A E + ++ G + +Y S+IT ++G E L EMD+++I + A
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
L+ AY++ G V+ + I P+ +I M + ++A + M G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE-EASAILAGWFR 392
P ++ + K S+++ ++ L D+ + G+ + ++ G+F+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 171 IRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFE 230
I +T++I H Q EEA + M G D + +++H S AG ++ E+YF
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 231 EIRLLG--EPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
E++ + EP + YG M+ Y R+G ++ + +M I + V++ LL A S
Sbjct: 396 EMKRVYHIEP-EIEHYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSS 451
Query: 289 IGNAEGAQRV 298
GN E A++V
Sbjct: 452 HGNIELAEQV 461
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K +LE A+ I + M R D V +TM+ + G + + YF E++ G ++
Sbjct: 215 KAGELESAKRIFSEMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEV 270
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
S +++A ++G E G+ L ++ V AL+ YSR GN A+ VF+ +
Sbjct: 271 SLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 303 QLAGIIPDDKICGL----VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
Q +K C + +I M GQ E+A F M G+ P S+L A
Sbjct: 331 Q-------EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 76/188 (40%)
Query: 193 ILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYI 252
IL+ M + G D + + ++ +Y K G L A++ + E+ + +Y S+I
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 253 RAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDK 312
G+ + + +L + ++ + + Y L+ Y + + ++ + G+ D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 313 ICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDL 372
+ + Y AG+ A M G+ P +L K+ AL L DL
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 373 EKEGIMVG 380
+K +VG
Sbjct: 421 QKSKTVVG 428
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+++ S NI Y ++I+ H L+EA+ +L + +GF + V T+++ Y KA
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+D + + G D +Y ++ Y +AG E +L M + ++ +
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
LL G A + +Q + + ++IK A + E A F ++ G
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 342 IEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE-GIM 378
+ P ++++ ++ A E ++KE G+M
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 38/243 (15%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA- 225
++ N+ Y +I GK Q E+A + M G + + + T +V YS++G D A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 226 -----------------------------------EEYFEEIRLLGEPLDKRSYGSMITA 250
++ ++R G + +Y ++I A
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 251 YIRAGM-PERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
Y +A M E +L++ + + S + LRA+ G E + ++ Q +GI P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 310 DDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
+ + +++ +YG +G +K E M++ T V+ A+ + L +E+L
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK-QMEYL 384
Query: 370 IDL 372
L
Sbjct: 385 FRL 387
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 162 LLEESFEVNIRDYTNIIH-YCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
L E F +++ Y +I +C K+N E+ +LT M++ G D + T++ + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNA-EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAR-EIYAGSEVY 279
+ E E++R G +YG++I AY G + L ++M ++ + +Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
L+ A+S++GN A + + +++ + P+ + + K Q E
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 86/209 (41%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E+ + N+ I+ +H+ L A M++ G + V T++H +++
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
+A ++E++ G D + Y ++I+ + ++E++ Y L+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
+ NAE + ++ G PD +I +G E E M+ G++
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 344 PTDRCIGSVLVAYEKESKLNTALEFLIDL 372
PT G+V+ AY +L+ AL+ D+
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 13/214 (6%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L+ E+ + +L+ +S + +I+ + L E I + + + + +IL ++
Sbjct: 418 LFQELWDSSLVPDSTTI-----ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
VH+Y+ G L+ A + F I L D S+ S+I AY G L EM A +
Sbjct: 473 VHMYAMCGDLEDARKCFNHILL----KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQL-AGIIPDDKICGLVIKAYGMAGQSEKAR 331
+ +LL A S G + F++++ GI P + G ++ G G A+
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 332 IAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTA 365
E M PT R GS+L A + A
Sbjct: 589 RFLEEMP---FVPTARIWGSLLNASRNHKDITIA 619
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
++LE+ + +S+ Y +I + +++EA+ + T M ++ V T++
Sbjct: 179 IFLEMPKRGCDPDSYT-----YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
++ + ++D A Y EE++ G + +Y S++ + G + L E M AR
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 273 YAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARI 332
Y L+ + + A + D + L G+ PD + G VI + + +A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 333 AFENMKRAGIEP 344
+ M GI P
Sbjct: 354 FLDEMILGGITP 365
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 182 GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK 241
K Q+ A+ + MK I + M+ Y+K G+ A + F E+ D
Sbjct: 268 AKCGQVATAKILFDKMKSPNLI----LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 242 RSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDA 301
S S I+A + G E+ S+ E + + + AL+ +++ G+ EGA+ VFD
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 302 IQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+ D + +I YG+ G++ +A + M+R G+ P D +L+A
Sbjct: 384 T----LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y+N YC K ++L + MK + D VI +M Y + + A F E++
Sbjct: 499 YSNC--YCLKDSRL-----VFDEMKVK----DLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
L E D+ ++ +M+TA + G+ ++ R + + ALL Y++ G+ E
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 294 GAQRVFDAIQLAGIIPDDKIC-GLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
A + FD+ D +C VI +Y G+ +KA E M GIEP V
Sbjct: 608 DAHKAFDSAA-----SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGV 662
Query: 353 LVA 355
L A
Sbjct: 663 LSA 665
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
+ N++ G ++ + + +RG C+ I ++ +Y+K G + A + F+
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS-- 615
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
D + S+I++Y G ++ +LE+M + I + +L A S G E
Sbjct: 616 --AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
+ F+ + GI P+ + ++ G AG+ KAR E M
Sbjct: 674 DGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ YTN++ +H++ +EAE+++ M + + AG LD AE+ F
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 230 EEIRLLGE-PLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSR 288
++ P + +Y ++ +A E L E+ R + S Y LL
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 289 IGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
G A ++ + + G PD+ ++I AY G++E+A
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 12/212 (5%)
Query: 166 SFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA 225
+FEV IR Q++ + +L MK +GF C + + +++ +Y + G +RA
Sbjct: 78 TFEVMIRKL-------AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERA 130
Query: 226 EEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
E F I+ G + Y ++ + + + +M Y LL+A
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
+ +GA+++ + G PD VI + G ++ R E EP
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPV 245
Query: 346 DRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
+++ KE A E + ++ ++GI
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 27/194 (13%)
Query: 176 NIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLL 235
NI+ CG+ + I + + D +LT +V +Y+ AG +D A E+F ++ +
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 236 G---------------------------EPLDKRSYGSMITAYIRAGMPERGESLLEEMD 268
E D + +MI+AY+ + P+ + EEM
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 269 AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSE 328
I +++ A + +G + A+ V I + G+ + I +I Y G +
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 329 KARIAFENMKRAGI 342
R FE M R +
Sbjct: 397 ATRDVFEKMPRRNV 410
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 181 CGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLD 240
CG+ L++A+ I +++ +C TTM+ Y ++ + A FEE+ G D
Sbjct: 291 CGR---LDDAQVIFDQTEKKDLVC----WTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
Query: 241 KRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFD 300
S S+I+A G+ ++ + + + + + + AL+ Y++ G + + VF+
Sbjct: 344 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE 403
Query: 301 AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
+ ++ + I A M G++ A F MK+ +EP + VL
Sbjct: 404 KMPRRNVVSWSSM----INALSMHGEASDALSLFARMKQENVEPNEVTFVGVL 452
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 167 FEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
F+ N+ + ++ ++ +++A+ + A++ R + V ++ +++ ++A
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKAL 247
Query: 227 EYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGE----SLLEEMDAREIYAGSEVYKAL 282
E F+ + G SY S+ A G E+G+ +++ + +AG+ L
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN----TL 303
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
L Y++ G+ A+++FD + ++ + + + AY G ++A FE M+R GI
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSL----LTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 343 EPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIM 378
P + SVL A L+ + ++K+GI+
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+L + F + Y ++ C LE+ + + M + G T++ +Y+K+G
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 311
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
+ A + F+ + D S+ S++TAY + G + EEM I +
Sbjct: 312 SIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 340
++L A S G + ++ ++ GI+P+ V+ G AG +A E M
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP-- 425
Query: 341 GIEPT 345
IEPT
Sbjct: 426 -IEPT 429
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 5/201 (2%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ +T ++ G+ + EEA I M++ G D L + + L+ ++
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRI 289
+ G S++T Y + G + L EM+ R+ + + A++ AY++
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS----WTAMVSAYAQF 450
Query: 290 GNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM-KRAGIEPTDRC 348
G A ++FD + G+ PD VI A AG EK + F+ M GI P+
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 349 IGSVLVAYEKESKLNTALEFL 369
++ + + +L A+ F+
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFI 531
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 200 RGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPER 259
RG D V M+ ++ G A E F E+++ G +D+ +GS++ A G
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 260 GESL----LEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG 315
G+ + + IY GS AL+ Y + A+ VFD ++ ++ +
Sbjct: 289 GKQIHACIIRTNFQDHIYVGS----ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM-- 342
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEF 368
+ YG G++E+A F +M+R+GI+P +G + A S L +F
Sbjct: 343 --VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
E +E + ++I+ C + +L+ + + + RG +Q + ++ +Y+K G L+
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 225 AEEYFEEIRLLGEPLDKRSYG---SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A FE I + RS SMI+ G + + M++ ++ + A
Sbjct: 328 ATSVFESISV-------RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAG 341
+L A G ++F ++ + P+ K G +I + G+S K + A+ +K
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIH---LLGRSGKLKEAYRLVKEMH 437
Query: 342 IEPTDRCIGSVLVA 355
++P D +G++L A
Sbjct: 438 VKPNDTVLGALLGA 451
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 203 IC-DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGE 261
+C + V M+ Y K +++A E FE R+ E + +++ M+ Y+ E
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFE--RMPFELKNVKAWSVMLGVYVNNRKMEDAR 197
Query: 262 SLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAY 321
E++ + + V+ ++ Y RIG+ A+ +F + D I +I Y
Sbjct: 198 KFFEDIPEKNAF----VWSLMMSGYFRIGDVHEARAIFYRV----FARDLVIWNTLIAGY 249
Query: 322 GMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMVGE 381
G S+ A AF NM+ G EP + S+L A + +L+ E + GI + +
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 382 EASAILAGWFRK 393
S L + K
Sbjct: 310 FVSNALIDMYAK 321
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 122/318 (38%), Gaps = 45/318 (14%)
Query: 111 IICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLY-LEVAEHALLEESFEV 169
I+ A+ G++++ + + +I P W +L LE+ + + E+
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE-MRHSGVEI 349
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N T++I CG+ + + EA + + + GF D + ++ +YSK+G +D +E+ F
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERG-------------------ESLLEEMDAR 270
E+ L + + MIT++ ++ P + SLL +D
Sbjct: 410 ED---LDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL 466
Query: 271 EIYAGSEVY---------------KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICG 315
+ G +V+ +L YS+ G+ E + ++F I D+
Sbjct: 467 NL--GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWA 520
Query: 316 LVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKE 375
+I + G +A F M G P + + +VL L E +
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA 580
Query: 376 GIMVGEEASAILAGWFRK 393
GI G + + L + K
Sbjct: 581 GIDKGMDLGSALVNMYSK 598
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
L +E + +++++ C A +I + + GF+ D V+ +++H Y+K G
Sbjct: 360 LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGS 419
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
LD F+++ + D S+ SM+ AY G + + ++MD I S + A
Sbjct: 420 LDLCMRVFDDM----DSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIA 472
Query: 282 LLRAYSRIGNAEGAQRVFDAI 302
LL A S G E R+F ++
Sbjct: 473 LLSACSHAGRVEEGLRIFRSM 493
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 26/267 (9%)
Query: 101 TKRCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEH 160
K + L RQI E N L+ ++V K A LS+ ELE M H
Sbjct: 345 VKDAEHLFRQIRNKGIESWN--SLITSFVDAGKLDEA--LSLFSELEEMNHVC------- 393
Query: 161 ALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAG 220
+ + N+ +T++I C + +++ M+ + + V + ++ I ++
Sbjct: 394 -----NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 221 HLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYK 280
L+ E + + +++ Y + G+ G + E + +++ + +
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS----WN 504
Query: 281 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM-KR 339
++++ Y G AE A +FD + +G PD V+ A AG EK R F +M KR
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 340 AGIEPTDR---CIGSVL--VAYEKESK 361
G+EP CI +L V + KE+
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEAS 591
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 175 TNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRL 234
+ ++ CG+ LE+ + + + + D V+ T ++ +Y+K G L+RA+ F
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA--- 259
Query: 235 LGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDARE-IYAGSEVYKALLRAYSRIGNAE 293
LG D ++Y +MI G+ + L EM + I S + +L A G
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 294 GAQRVFD-AIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
+ F I+ GI P + G ++ YG +G ++A +M +EP GS+
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP---MEPDVLIWGSL 376
Query: 353 LVAYEKESKLNT---ALEFLIDLE 373
L + T AL+ LI+L+
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIELD 400
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 33/199 (16%)
Query: 178 IHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGE 237
+ K + + E ++ + K I + L+T++ Y +A D A + FEE+ LG
Sbjct: 74 VQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 238 PLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQR 297
P S+ +++ A + + + ER L +E R
Sbjct: 134 PRTVVSFNALLAACLHSDLFERVPQLFDEFPQR--------------------------- 166
Query: 298 VFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYE 357
I PD G++IK+Y +G+ EKA +M+ G+E T ++L +
Sbjct: 167 ------YNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 358 KESKLNTALEFLIDLEKEG 376
K ++ A I++ +G
Sbjct: 221 KNGLVDEAESLWIEMVNKG 239
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVI--LTTMVHIYSKAGH 221
++ F + Y ++ G+ L+ + +++ M++ G CD+ I T ++ +Y KA
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNG--CDKDIRTWTILISVYGKAKK 239
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ + FE++R G LD +Y MI + AG + +EM + I G YK
Sbjct: 240 IGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKM 299
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKA 330
LL ++ + Q + D + I + G ++K++ ++G+ ++A
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEA 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 3/208 (1%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y+ I + +LEEA + L + + + DQ ++VH + G L +A + ++
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+G Y S+I + + E+ ++M+ Y A++ Y +G E
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A F ++ G PD K I A +SE A M GI P+ +V
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Query: 354 VAYEKESKLNTALEFLIDLEKEGIMVGE 381
+E K + A I L+K+ +V +
Sbjct: 1002 YGLNREGKHDLA---RIALQKKSALVAQ 1026
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 97/240 (40%), Gaps = 4/240 (1%)
Query: 103 RCKALMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHAL 162
R ++L+ ++I + ++ ++ + P + SV+K + PL+ +
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
L + + +T++I C + L + + GF D + +V YSK G +
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDM 158
Query: 223 DRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKAL 282
+ A + F+ + ++ S+++ + + G+ + + +M S + +L
Sbjct: 159 EGARQVFDRM----PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 283 LRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGI 342
L A ++ G V I G+ + K+ +I Y G KAR F+ MK +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 207 VILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEE 266
V+ T+M++ Y L A YF+ L D + +MI+ YI G SL ++
Sbjct: 60 VLWTSMINGYLLNKDLVSARRYFD----LSPERDIVLWNTMISGYIEMGNMLEARSLFDQ 115
Query: 267 MDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQ 326
M R++ + + +L Y+ IG+ E +RVFD + + + + IK Y G+
Sbjct: 116 MPCRDVMS----WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL----IKGYAQNGR 167
Query: 327 SEKARIAFENMKRAG-IEPTDRCIGSVLVAYEK 358
+ +F+ M G + P D + VL A K
Sbjct: 168 VSEVLGSFKRMVDEGSVVPNDATMTLVLSACAK 200
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 12/210 (5%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L E+++ ++ C + + + + F + T++ +YSK G
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 222 LDRAEEYFEEIRLLGEPLDKR--SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
LD A+ F E+ D+ SY SMI Y R G+ L EEM+ I
Sbjct: 347 LDSAKAVFREMS------DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
A+L +R + +RV + I+ + D + ++ Y G ++A + F M+
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 340 AGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
I + IG Y K N AL
Sbjct: 461 KDIISWNTIIG----GYSKNCYANEALSLF 486
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
+I GK LEEA +I AM +R D +++ ++ G D FE + G
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDER----DLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 237 EPLDKRSYGSMIT-----AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGN 291
D + +++ A +R G G ++ + R+ + ++ +L+ Y + G+
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK-SSNEFIHNSLMDMYVKCGD 417
Query: 292 AEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGS 351
A+ VFD+++ + D ++I YG+ E A F M RAG++P +
Sbjct: 418 LRDARMVFDSMR----VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 352 VLVAYEKESKLNTALEFLIDLE 373
+L A LN FL +E
Sbjct: 474 LLQACSHSGFLNEGRNFLAQME 495
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 8/207 (3%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
YT +I + ++A + M+ G D V ++ + K G R E FE +R
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLG---RMVEAFELLR 292
Query: 234 LL---GEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
L G L R Y S+I RA + L M + I +Y L++ S+ G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 291 NAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIG 350
E A ++ ++ GI PD VIKA G E+ R M P D C
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP-DACTH 411
Query: 351 SVLV-AYEKESKLNTALEFLIDLEKEG 376
++L+ + + + A E ++EK G
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 2/218 (0%)
Query: 177 IIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLG 236
+I + N + L +K G D ++ Y+K G ++A E F ++
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 237 EPLDKRSYGSMITAYIRAGMP-ERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGA 295
D +Y ++ +R + ++ EM + L+ + G A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 296 QRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
Q++FD + GI P+ ++I G ++ AR F M+ +G P ++L
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 356 YEKESKLNTALEFLIDLEKEGIMVGEEA-SAILAGWFR 392
+ K ++ A E L EK+G ++G S+++ G FR
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K + +A+ + M RG ++V T ++ + G D A + F E++ G D
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
++ +++ + + G LL + G Y +L+ R A ++ +
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
I PD + ++I+ AG+ E A +M GI P C +V+ A
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 48/227 (21%)
Query: 153 LYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTM 212
L++E+ E +L +++ + +++ C LEE + + G + + T+
Sbjct: 116 LFVEILEDGILPDNYT-----FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTL 170
Query: 213 VHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREI 272
+++Y++ +D A F+ I EP Y +MIT Y R P SL EM + +
Sbjct: 171 INMYTECEDVDSARCVFDRIV---EPC-VVCYNAMITGYARRNRPNEALSLFREMQGKYL 226
Query: 273 ----------------------------YAGS-------EVYKALLRAYSRIGNAEGAQR 297
YA +V AL+ +++ G+ + A
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 298 VFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+F+ ++ D + +I AY G++EK+ + FE M+ ++P
Sbjct: 287 IFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ F+ ++ ++++ CG L A+ I M + GF+ + + ++ +Y+K G +
Sbjct: 301 DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT 360
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A + F + E D S+ S+I+ YI++G L + M E A Y L+
Sbjct: 361 ARDVFNSM----ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
+R+ + + + + +GI D + +I Y G+ + F +M
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 183 KHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKR 242
K++ E + L+ ++ + + +++ +SK G A E++ ++R DK
Sbjct: 48 KYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKY 107
Query: 243 SYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAI 302
++ S+I A E G+ + E++ + V AL+ YSR+G A++VFD +
Sbjct: 108 TFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM 167
Query: 303 QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAY 356
+ ++ + + I Y G E+A + +K + I P + SVL A+
Sbjct: 168 PVRDLVSWNSL----ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 208 ILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK--RSYGSMITAYIRAGMPERGESLLE 265
I +V ++ K G LD+A F+ +R DK + + SM+ Y+ G + L E
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMR------DKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 266 EMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAG 325
+++ ++ A++ Y + + A +F +Q AGI PD+ + ++ G
Sbjct: 238 RSPVKDVV----LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
Query: 326 QSEKARI--AFENMKRAGIEPTDRCIGSVLV-AYEKESKLNTALEFLIDLEK 374
E+ + + N R + D+ +G+ LV Y K + TALE ++++
Sbjct: 294 ALEQGKWIHGYINENRVTV---DKVVGTALVDMYAKCGCIETALEVFYEIKE 342
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 80/215 (37%), Gaps = 1/215 (0%)
Query: 166 SFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRA 225
S+ +Y + H + E IL MK L ++ Y K GH+D+A
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQA 165
Query: 226 EEYFEEI-RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
E F + + LG Y S++ A M +L+ M + + Y L+
Sbjct: 166 VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 285 AYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+ G + AQ D + G P + L+I+ AG E A+ M + G P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 345 TDRCIGSVLVAYEKESKLNTALEFLIDLEKEGIMV 379
+ ++ A K ++ +E K G+ V
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 199 QRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPE 258
+RGF C + T++H Y+ + + A + FE + + + R+ ++I +++ GM E
Sbjct: 333 KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEAS--VKDHIASRN--ALIAGFVKNGMVE 388
Query: 259 RGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVF-DAIQLAGIIPDDKICGLV 317
+ + ++ ++I++ + A++ Y++ + + A +F + I + + PD V
Sbjct: 389 QAREVFDQTHDKDIFS----WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 318 IKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
A G E+ + A + + + I P D +++ Y K + TAL
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIF 496
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 170 NIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYF 229
N+ + N++ K L A + +M +R D V TMV Y++ G+L A ++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 230 EEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAG--SEVYK--ALLRA 285
+E R G ++ S+ ++TA +++ R L + + + AG S V +++ A
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKS----RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPT 345
Y++ G E A+R FD + + D I +I Y G E A F M E
Sbjct: 224 YAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLGDMEAAEKLFCEMP----EKN 275
Query: 346 DRCIGSVLVAYEKESKLNTALEFL 369
+++ Y ++ N AL+
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLF 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
+ +++++++ +YSK+G L+ +E F R+ + D + +MI+A + G+ + +L
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA-GIIPDDKICGLVIKAYGM 323
++M + +L A S G E R F+++ + GI+PD + +I G
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 324 AG 325
AG
Sbjct: 462 AG 463
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKA 219
H + ++S ++ YT +I +E A+ + + + D V M+ Y++
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAET 244
Query: 220 GHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
G+ A E F+++ D+ + ++++A ++G E G + +D + ++
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 280 KALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKR 339
AL+ YS+ G E A +F+ + +I + + G Y ++A + F+ M R
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIG----GYTHMNLYKEALLLFQEMLR 360
Query: 340 AGIEPTDRCIGSVLVA 355
+G P D + S+L A
Sbjct: 361 SGETPNDVTMLSILPA 376
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 189 EAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMI 248
A + M G + + ++ +K+ ++ + LG LD + S+I
Sbjct: 117 SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 249 TAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGII 308
+ Y++ G E + ++ R++ + Y AL++ Y+ G E AQ++FD I + ++
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVS----YTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 309 PDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVA 355
+ + I Y G ++A F++M + + P + + +V+ A
Sbjct: 233 SWNAM----ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 38/216 (17%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
++S + N +++ C +LE + ++ GF + + + +YSK G +D
Sbjct: 208 DKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMID 267
Query: 224 RAEEYFEEI------------------------------RLL--GEPLDKRSYGSMITAY 251
A+ FEE+ ++L GE D ++ ++ A
Sbjct: 268 VAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Query: 252 IRAGMPERGESLLEEMD-AREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPD 310
+ GM +G+ L + M+ +I E Y ++ R+G Q +D I+ + PD
Sbjct: 328 VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL---QEAYDLIKTMPMKPD 384
Query: 311 DKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTD 346
+ G ++ A G E A IA E + + +EPT+
Sbjct: 385 AVVWGTLLGACSFHGNVEIAEIASEALFK--LEPTN 418
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 116/300 (38%), Gaps = 40/300 (13%)
Query: 113 CFSAEKGNVSDLLNAWVKIMKPIRAEWLSVLKELETMEHPLYLEVAEHALLEESF----- 167
C + G++S + + I KP+ +W ++++ HP ++L++S
Sbjct: 45 CAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAI 104
Query: 168 -EVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAE 226
V+ + + C + + + + +RG D ++ TT++ YSK G L A
Sbjct: 105 CRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAY 164
Query: 227 EYFEEIRLLGEPL-DKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRA 285
+ F+E+ P+ D S+ ++I + L + M+ I A L A
Sbjct: 165 KLFDEM-----PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGA 219
Query: 286 YSRIGNAEGAQRVFDAIQLAGIIPDDKI------CGLVIKAY------------------ 321
S +G+ + + +F +I + CG V KAY
Sbjct: 220 CSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 322 --GMA--GQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEGI 377
G A G++ +A F+ ++ GI+P D + L A + L ++ +G+
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 74/176 (42%), Gaps = 3/176 (1%)
Query: 172 RDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEE 231
R + ++I G +E+ + MKQ G + +++ I K G A + F+E
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 232 I-RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIG 290
+ R G D ++ ++I + + M + + ++M+ Y ++ R G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 291 NAEGAQRVFDAI--QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
+ A V + + + P+ +++ Y M + ++A + F +M G++P
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 160 HALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQ--RGFICDQVILTTMVHIYS 217
H +L + N Y +I + ++ +E ++IL F D ++ +
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Query: 218 KAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSE 277
AGHLD A + F+E+ + D SY +I +R E+L E+ +E+ G +
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 278 VYKALLRAYSRI-------GNAEGAQRVFDAIQLAGI 307
K L AY+ + G + A++VF + G+
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 194 LTAMKQRGFI-CDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRS---YGSMIT 249
L A + F+ CD + ++V +Y+K G L A + FEE + + K S + +I
Sbjct: 148 LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEES---PDRIKKESILIWNVLIN 204
Query: 250 AYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIP 309
Y RA +L M R +GS + L++ Y G A+++F+ ++P
Sbjct: 205 GYCRAKDMHMATTLFRSMPERN--SGS--WSTLIKGYVDSGELNRAKQLFE------LMP 254
Query: 310 DDKICGL--VIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTAL 366
+ + +I + G E A + M G++P + I +VL A K L + +
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGI 313
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%)
Query: 182 GKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDK 241
GK N+ A L MK+ G + TT++ Y +G LD+A+E F E+ + G+ +
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 242 RSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRV 298
+Y SMI AG LL+EM++R VY L+ + G A++V
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKV 816
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 168 EVNIRDYT---NIIHYCGKHNQLEEAENILTAMK--QRGF-ICDQVILTTMVHIYSKAGH 221
+ N+RD T N++ +H + EAE + GF + + I ++ +SK G
Sbjct: 145 DFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGW 204
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
+ +EY++++ G D SY + ++G P + L +EM +R + Y
Sbjct: 205 WGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNT 264
Query: 282 LLRAYSRIGNAEGAQ---RVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMK 338
++RA IG ++G + RVF ++ G P+ +IK G+ A + M
Sbjct: 265 VIRA---IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 339 RAGIEPTDRCIGSVLVAYEKESKL 362
+ G +P + EK S++
Sbjct: 322 KRGCQPDSITYMCLFSRLEKPSEI 345
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 81/203 (39%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y +I K L ++ M +G + ++V T++H G LD+A E +
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ +YG++I ++ LL M+ R + +Y L+ + G AE
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A ++ + G P+ + +++ G+ +A+ M +G P S++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 354 VAYEKESKLNTALEFLIDLEKEG 376
+ K A++ +++K G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTG 462
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%)
Query: 164 EESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLD 223
E + +N Y+ +I K + EEA ++ M ++G + V+ + +V + G +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 224 RAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALL 283
A+E + G + +Y S++ + + G+ E + +EMD Y L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 284 RAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENM 337
+G + A V+ + GI PD +IK G + A + M
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%)
Query: 215 IYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYA 274
+ S G+L +A E F+ RL G + RSY ++ A+ L +M R++
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 275 GSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAF 334
+ YK L++ + R G GA + D + G +PD ++ + Q +A
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 335 ENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFLIDLEKEG 376
MK G P ++++ + +E + A + L D+ G
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%)
Query: 162 LLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGH 221
+L + F + YT +++ + QL EA +L MK +G D V TM+ + +
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 222 LDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKA 281
A + +++ G + SY ++I GM + G+ LEEM ++ V
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 282 LLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFEN 336
L++ + G E A V + + G +VI +SEK ++ E+
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 425
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
Y ++ G+ Q + + + + G D I TM+H+Y G L A F +
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF--LG 186
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
++G D ++ SMI + + G+ ++ ++L +EM R + + +++ + R G +
Sbjct: 187 MIG--FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVS----WNSMISGFVRNGRFK 240
Query: 294 GAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSVL 353
A +F +Q + PD ++ A G SE+ R E + R E + +++
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 354 VAYEK 358
Y K
Sbjct: 301 DMYCK 305
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 188 EEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI--RLLGEPLDKRSYG 245
E A ++ + +++ G D V ++ + +G + RA+E+F + + + EP K Y
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH-YT 399
Query: 246 SMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLA 305
M+ AG+ E E+L++ M E + ++ +LL A +IGN E A+R A L
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEE---DTVIWSSLLSACRKIGNVEMAKRA--AKCLK 454
Query: 306 GIIPDDKICGLVI--KAYGMAGQSEKA 330
+ PD+ CG V+ AY G E+A
Sbjct: 455 KLDPDET-CGYVLLSNAYASYGLFEEA 480
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 10/210 (4%)
Query: 145 ELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFIC 204
+L T ++ + H L+ +S + N+ C + + + + I G
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVL-----PNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 205 DQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLL 264
D + +M H+Y + G + A + F+ + D + +++ AY R G E +L
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRM----SDKDVVTCSALLCAYARKGCLEEVVRIL 205
Query: 265 EEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMA 324
EM++ I A + +L ++R G + A +F I G PD V+ + G +
Sbjct: 206 SEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS 265
Query: 325 GQSEKARIAFENMKRAGIEPTDRCIGSVLV 354
R+ + + G+ D+C+ S ++
Sbjct: 266 EMLNMGRLIHGYVIKQGLL-KDKCVISAMI 294
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Query: 157 VAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIY 216
V +H +L E+N Y ++H H +E E IL M Q + + +++
Sbjct: 301 VIQH-ILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 217 SKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGS 276
KA L RA ++F ++ D +Y +++ A + GM + LL + G
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL 419
Query: 277 EVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDD 311
Y +++ ++ G + A ++ + AGI PDD
Sbjct: 420 ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIR 233
++++I C L + + + + GF + I + +V +YSK G++ A + F+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 234 LLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNAE 293
+ LD+ S+ ++I + G SL EEM + + + A+L A S +G +
Sbjct: 406 V----LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 294 GAQRVFDAI-QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEPTDRCIGSV 352
A F+++ ++ G+ + + V G AG+ E+ A+ + + +EPT ++
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE---AYNFISKMCVEPTGSVWSTL 518
Query: 353 LVAYEKESKLNTALE-----FLIDLEKEGIMV 379
L + L A + F +D E G V
Sbjct: 519 LSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 174 YTNIIHYCGKHNQLEEAENILTAM-KQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEI 232
+ +IH K ++++EA + M K G I +++ + G L A + +E
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 233 RLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLRAYSRIGNA 292
+D Y ++I++ I+AG +LEEM + + Y L+ + ++
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 293 EGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIEP 344
E A RV D + G+ PD +++ + + E+A FE+M R G P
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSP 361
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 201 GFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERG 260
G + D L T++ +YS +D A + F+E D +Y +I ++A R
Sbjct: 147 GLLSDLFTLNTLIRVYSLIAPIDSALQLFDE----NPQRDVVTYNVLIDGLVKAREIVRA 202
Query: 261 ESLLEEMDAREIYAGSEVYKALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKA 320
L + M R++ + + +L+ Y+++ + A ++FD + G+ PD+ + A
Sbjct: 203 RELFDSMPLRDLVS----WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSA 258
Query: 321 YGMAGQSEKARIAFENMKRAGIEPTDRCIGSVLVAYEKESKLNTALEFL 369
+G +K + + KR + ++ Y K ++TA+E
Sbjct: 259 CAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 210 TTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDA 269
+ +V +Y K G ++ +E+ F+E+ + + S+I Y G + +L EEM
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEM----PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 270 REIYAGSE--VYKALLRAYSRIGNAEGAQRVFDAIQLA-GIIPDDKICGLVIKAYGMAGQ 326
R + +LL A SR G E ++FD+++ GI P + ++ G AG
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 327 SEKARIAFENMKRAGIEPTDRCIGSV 352
E+ A+E +K+ I+PT G++
Sbjct: 465 VER---AYEFIKKMPIQPTISVWGAL 487
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 165 ESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHLDR 224
+ FE + T+++ CG + L + I ++++ I + ++ ++ +Y+K G L++
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 225 AEEYFEEIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVYKALLR 284
A + FE ++ D S+ +MI+AY +G +L ++ + S + L
Sbjct: 363 ARDVFENMK----SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 285 AYSRIGNAEGAQRVFDAI-QLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRAGIE 343
A S G E + F + I P + ++ G AG K + A+ ++ +E
Sbjct: 419 ACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG---KVKEAYRFIQDMSME 475
Query: 344 PTDRCIGSVLVAYEKESKLNTAL 366
P +R G++L A S + L
Sbjct: 476 PNERVWGALLGACRVHSDTDIGL 498