Miyakogusa Predicted Gene

Lj1g3v2581040.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2581040.1 Non Chatacterized Hit- tr|I3TAE6|I3TAE6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,43.36,2e-19,CORNICHON-RELATED,NULL;
Cornichon,Cornichon,CUFF.29202.1
         (136 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12390.1 | Symbols:  | Cornichon family protein | chr1:422034...   145   9e-36
AT4G12090.1 | Symbols:  | Cornichon family protein | chr4:724216...   139   4e-34
AT1G62880.1 | Symbols:  | Cornichon family protein | chr1:232921...   134   1e-32
AT1G12340.1 | Symbols:  | Cornichon family protein | chr1:419739...   133   4e-32
AT3G12180.1 | Symbols:  | Cornichon family protein | chr3:388346...   105   1e-23

>AT1G12390.1 | Symbols:  | Cornichon family protein |
           chr1:4220347-4221481 FORWARD LENGTH=137
          Length = 137

 Score =  145 bits (366), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 94/134 (70%)

Query: 1   MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
           M ++  W+ +F  ++ L+ ++ YQL+ L DLEFDYINPYDS SRIN VVLPEFI+ G+ C
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIF 120
              L+ GHWF   L LP +YYN  LY KR+HL DVTEI+N L WEK KRLFK+A +V+  
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 VFSILSLVWTLTED 134
             +I  ++++  +D
Sbjct: 121 FLTIFWMIYSALDD 134


>AT4G12090.1 | Symbols:  | Cornichon family protein |
           chr4:7242165-7242924 REVERSE LENGTH=135
          Length = 135

 Score =  139 bits (351), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 88/118 (74%)

Query: 1   MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
           M ++L WI +F+ + TL+ ++ YQL  L DLEFD INPYD +SRIN++VLPEF + G+ C
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVI 118
              ++ GHWF   LSLP ++YN RLY KREHLADVTE+YN  KWE+ KR++K+ ++ +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIAL 118


>AT1G62880.1 | Symbols:  | Cornichon family protein |
           chr1:23292125-23293307 FORWARD LENGTH=137
          Length = 137

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 95/134 (70%)

Query: 1   MAEVLYWISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFC 60
           M EV  WI +F++++TLL ++ YQLI L DLEFDYINPYDS SRIN VVLPE I+ G  C
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FTNLIAGHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIF 120
              L+ GHWF   L +P +YYN  LY +++HL DVTEI+N L WEK KRLFK+A +++  
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 VFSILSLVWTLTED 134
             +I  L+++  +D
Sbjct: 121 FLTIFWLIYSTLDD 134


>AT1G12340.1 | Symbols:  | Cornichon family protein |
           chr1:4197396-4198032 FORWARD LENGTH=129
          Length = 129

 Score =  133 bits (334), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 80/112 (71%)

Query: 23  YQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFCFTNLIAGHWFTFFLSLPCMYYN 82
           + L+ L DLEFDYINPYDS SRIN VVLPEFI+ G+ C   L+ GHWF   L LP +YYN
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 74

Query: 83  ARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIFVFSILSLVWTLTED 134
             LY KR+HL DVTEI+N L WEK KRLFK+A +V+    +I  ++++  +D
Sbjct: 75  FHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD 126


>AT3G12180.1 | Symbols:  | Cornichon family protein |
           chr3:3883464-3884570 FORWARD LENGTH=146
          Length = 146

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 85/132 (64%), Gaps = 4/132 (3%)

Query: 7   WISTFVLILTLLCMLGYQLILLVDLEFDYINPYDSTSRINQVVLPEFIILGIFCFTNLIA 66
           WI +F + L L+  + YQ+I L DLE DY+NP+++++RIN++V+PEFI+ G  C   L+ 
Sbjct: 8   WIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLT 67

Query: 67  GHWFTFFLSLPCMYYNARLYFKREHLADVTEIYNKLKWEKNKRLFKVANLVIIFVFSI-- 124
            HW  F +++P   Y+A LY +R +L DVTE++  + +EK  R  K+   V +F+  +  
Sbjct: 68  WHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFR 127

Query: 125 --LSLVWTLTED 134
             LS V++ TED
Sbjct: 128 LTLSAVYSFTED 139