Miyakogusa Predicted Gene
- Lj1g3v2570540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2570540.1 tr|G7KPQ6|G7KPQ6_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,28.71,1e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.29157.1
(386 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 278 4e-75
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 3e-74
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 4e-72
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 4e-72
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 1e-71
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 7e-69
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 1e-68
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 249 3e-66
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 3e-65
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 5e-61
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 9e-60
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 209 3e-54
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 194 9e-50
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 1e-49
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 1e-49
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 182 2e-46
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 3e-45
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 5e-45
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 4e-44
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 6e-44
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 6e-44
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 7e-43
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 2e-42
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 6e-42
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 8e-41
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 8e-41
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 1e-40
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 9e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 5e-39
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 3e-38
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 7e-38
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 153 2e-37
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 4e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 149 2e-36
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 148 6e-36
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 147 1e-35
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 9e-35
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 2e-34
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 7e-34
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 7e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 7e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 9e-33
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 1e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 130 2e-30
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 129 4e-30
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 7e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 6e-29
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 124 1e-28
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 124 1e-28
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 122 4e-28
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 8e-27
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 2e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 3e-25
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 108 6e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 107 2e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 106 3e-23
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 4e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 97 3e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 5e-20
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 93 3e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 82 5e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 5e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 6e-16
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 78 1e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 77 2e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 77 2e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 76 3e-14
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 76 5e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 75 6e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 75 8e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 74 1e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 74 1e-13
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 72 6e-13
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 72 8e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 70 4e-12
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 69 8e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 69 8e-12
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 68 1e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 67 3e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 66 4e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 66 4e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 65 9e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 64 2e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 63 4e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 63 4e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 62 5e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 7e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 58 1e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 58 1e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 58 1e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 57 2e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 56 5e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 7e-08
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 8e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 55 1e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 2e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 53 3e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 50 3e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 50 3e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 233/393 (59%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P P++I+F ++ +++ K K Y ++L QMES GI ++ T SI+IN
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ +AFS + KI+K GY+PDT+ F TL+ GLCL +V AL+ D +V G +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++ + L + V A+ D +V GF+ ++V+Y ++N +CK GQT A
Sbjct: 192 TLITLNTLV----NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LLRK+E + ++ D V Y+ IID LCKD + +AFNL++EM K ++ TY LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM------- 300
FC G+ + +LL +M+ + I P+ TF++L+D KEGK++ A +L MM
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 301 -------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
I GFC +L+EA +++D M++K DPD TF+IL++G CK ++ +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M +GV N VTYN+L+ G C ++ AK +
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 198/381 (51%), Gaps = 18/381 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R++ T P+ + +G +L + K A+ L +ME I + V SI+I+
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + AF++ ++ KG++ D IT+ TLI G C + + D++ +
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++S+L F + ++ A Q +++ +G + ++Y+ LI+G CK + + A
Sbjct: 332 NVVTFSVLIDSF----VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+Q++ + K PD++ + +I+ CK + D L+ EM + ++ N TY L+ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG---------- 297
FC G+L+ A +L EMV++ + PD ++ IL+DGLC G+++ A + G
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 298 ----VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+++I+G C ++ +A +L + K + DA ++I++ LC++ + A +
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 354 VMMKQGVKPNVVTYNSLMDGH 374
M ++G P+ +TYN L+ H
Sbjct: 568 KMTEEGHAPDELTYNILIRAH 588
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
+++ +P+++ F ++ S VK A L +M GI N +T + LI+ +C +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ A ++ ++ KG PD +TF LI G C ++ L+ ++ +G + V+Y+
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
L F + ++ A + ++V++ R D VSY IL++GLC G+ + AL++ KI
Sbjct: 444 LVQGFCQ----SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E ++ D+ +Y II +C V DA++L+ + K + + Y +I C L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+A L +M + PD T+NIL+ + A ++ M GF
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A+ + + ++ P I+ F ++ K + L +M G+I+N VT +
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+ +C G++ A + +++ + +PD +++ L+ GLC N ++++AL+ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
LD Y I+ + + + V A + +G +LD +Y+I+I+ LC+
Sbjct: 504 MELDIGIYMIII----HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A L RK+ + PD + Y +I + D T A L EM S +V T +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 245 I 245
I
Sbjct: 620 I 620
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DA +L+ +M+ R LP V + L Q + L +M +K I YT +I++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 281 DGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNID 326
+ C+ K+ A + +G +M + G C+ ++ EA EL+D MV
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
P T + LV+GLC GKV A ++ M++ G +PN VTY +++ C
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 223/379 (58%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSI+EF K+L+++ KM + ISL QM++ GI N+ T SILIN
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+ A +VLAK++K GY+PD +T +L+ G C ++ A+ +V G++
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +++ L R A+ D +V +G + D V+Y I++NGLCK G A
Sbjct: 185 DSFTFNTLIHGLFRH----NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL+K+E ++P VV+Y TIID+LC K V DA NL++EM +K I PNV TY +LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A+ LL +M+ + I+P+ TF+ L+D KEGK
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK------------------- 341
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L EA +L DEM+ ++IDPD +T+S L++G C ++ AK++ +M+ + PNVVTY
Sbjct: 342 --LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N+L+ G C V++ ++
Sbjct: 400 NTLIKGFCKAKRVDEGMEL 418
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 180/382 (47%), Gaps = 53/382 (13%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + ++ + P ++ + I+ +L K+ A++L +M++ GI N+VT + LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C C+ G+ A +L+ ++++ P+ +TF+ LI ++ A + +D+++
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI----- 353
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P D +YS LING C +
Sbjct: 354 --------------KRSIDP--------------------DIFTYSSLINGFCMHDRLDE 379
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + + K P+VV Y T+I CK K V + L+ EM + ++ N TYT LI+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
GF + A + +MV+ + PD T++IL+DGLC GKV+ A V +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C G++++ +L + K + P+ T++ ++ G C++G + A +
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 353 GVMMKQGVKPNVVTYNSLMDGH 374
M ++G P+ TYN+L+ H
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAH 581
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
P+++ F ++ + VK A L +M I ++ T S LIN +C ++ A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ ++ K P+ +T+ TLIKG C +V ++ ++ +G + V+Y+ L F
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF- 441
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
A +V+ G D ++YSIL++GLC G+ + AL + ++ ++
Sbjct: 442 ---FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+ Y +I+ +CK V D ++L+ + K + PNV TYT ++ GFC G +EA L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEG 287
EM + PD+ T+N L+ ++G
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+++ +++ P I + ++ A + M S N+VT + LI +C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ + ++ ++G +T+T+TTLI G + A +V+ G D +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+YSIL + + V+ AL + + D +Y+I+I G+CK G+ + L
Sbjct: 468 TYSILL----DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ K V+P+VV YTT++ C+ L +A L+ EM + LP+ TY LI
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTF----NILVDG 282
G + EL+ EM + DA T N+L DG
Sbjct: 584 DGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 113/268 (42%), Gaps = 60/268 (22%)
Query: 169 VSYSILINGLCKMGQTKPALQ----LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
V S+L G C G P+ +R G V+ D Y I + D + DA N
Sbjct: 15 VHRSLLGKGKC--GTAPPSFSHCSFWVRDFSG--VRYD---YRKISINRLNDLKLDDAVN 67
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
L+ +MV R P++ ++ L+ + + L ++M I + YT++IL++ C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 285 KEGKVKGAKNVLGVMM--------------IYGFC----------IVGQL---------- 310
+ ++ A VL MM + GFC +VGQ+
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 311 ---------------KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
EA L+D MV K PD T+ I+V+GLCK G + A ++L M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ ++P VV YN+++D C VN A
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDA 275
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 231/393 (58%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSIIEF K+L+++ KM + ISL QM++ GI N T SILIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+P A +VL K++K GY+P+ +T ++L+ G C + ++ A+ D + G++
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+++ L + A+ D +VA+G + D V+Y +++NGLCK G T A
Sbjct: 185 NTVTFNTLI----HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LL K+E ++P V++Y TIID LCK K + DA NL+ EM +K I PNV TY++LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C G+ +A+ LL +M+ + I+PD +TF+ L+D KEGK+ A+ + M
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GFC+ +L EA ++ + MV+K+ PD T++ L+ G CK +V+ V
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++G+ N VTYN L+ G + + A++I
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 177/369 (47%), Gaps = 60/369 (16%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA + N++ + P ++ + I+ L K KH A++L +ME+ GI N+VT S LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C+ G+ A +L+ ++++ PD TF+ LI ++ A + +D++V
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV----- 353
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P+ V +YS LING C +
Sbjct: 354 --------------KRSIDPSIV--------------------TYSSLINGFCMHDRLDE 379
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q+ + K PDVV Y T+I CK K V + ++ EM + ++ N TY LI
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G G A E+ EMV+ + P+ T+N L+DGLCK GK
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK------------------ 481
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
L++A + + + ++P YT++I+++G+CK GKV+ ++ + +GVKP+VV
Sbjct: 482 ---LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 367 YNSLMDGHC 375
YN+++ G C
Sbjct: 539 YNTMISGFC 547
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DA L+ EMV R P++ ++ L+ + + L ++M I + YT++IL+
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 281 DGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNID 326
+ C+ ++ A VLG MM + G+C ++ EA L+D+M
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
P+ TF+ L+ GL K A ++ M+ +G +P++VTY +++G C
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 235/393 (59%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ + P P++I+F ++ +++ K K Y ++L QME GI N+ T SI+IN
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ AFS + KI+K GY+P+TITF+TLI GLCL +V AL+ D +V G +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D ++ + L + +S + A+ D +V G + + V+Y ++N +CK GQT A
Sbjct: 192 DLITINTLV---NGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LLRK+E + ++ D V Y+ IID LCK + +AFNL++EM K I N+ TY LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
FC G+ + +LL +M+ + I+P+ TF++L+D KEGK++ A+ + M
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GFC L +A +++D MV+K DP+ TF+IL++G CK ++ +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M +GV + VTYN+L+ G C + ++N AK++
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 192/381 (50%), Gaps = 18/381 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + ++++ P+ + +G +L + K A+ L +ME I + V SI+I+
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + AF++ ++ KG + IT+ LI G C + + D++ +
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++S+L F + ++ A + H +++ +G D ++Y+ LI+G CK A
Sbjct: 332 NVVTFSVLIDSF----VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q++ + K P++ + +I+ CK + D L+ +M + ++ + TY LI G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG----------KVKGAKNVLG 297
FC +G+L A EL EMV++ + P+ T+ IL+DGLC G K++ +K L
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 298 V----MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ ++I+G C ++ +A +L + K + P T++I++ GLCK+G + A+ +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 354 VMMKQGVKPNVVTYNSLMDGH 374
M + G P+ TYN L+ H
Sbjct: 568 KMEEDGHAPDGWTYNILIRAH 588
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 190/380 (50%), Gaps = 18/380 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + ++ + +++ I+ L K A +L ++ME GI +N++T +ILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C+ G+ +L ++K+ P+ +TF+ LI +++ A + H +++ +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D ++Y+ L F + + +A Q D +V++G + +++ILING CK +
Sbjct: 366 PDTITYTSLIDGFCKE----NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
L+L RK+ + V D V Y T+I C+ + A L+ EMVS+++ PN+ TY L+
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL---------- 296
G C G+ ++A E+ +++ ++ D +NI++ G+C KV A ++
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 297 GV----MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
GV +MI G C G L EA L +M PD +T++IL+ +G + ++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 353 GVMMKQGVKPNVVTYNSLMD 372
+ + G + T ++D
Sbjct: 602 EELKRCGFSVDASTIKMVID 621
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DA +L+ +M+ R LP V ++ L Q L +M K I + YT +I++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 281 DGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNID 326
+ C+ K+ A + +G + +I G C+ G++ EA EL+D MV
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
PD T + LV+GLC GK A ++ M++ G +PN VTY +++ C
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 225/379 (59%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSI+EF K+L+++ KM + ISL QM++ GI ++ T SI IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+ A +VLAK++K GY+PD +T ++L+ G C + ++ A+ D +V G++
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +++ L + A+ D +V +G + D V+Y ++NGLCK G A
Sbjct: 187 DTFTFTTLI----HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL+K+E ++ DVV+Y TIID LCK K + DA NL++EM +K I P+VFTY++LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A+ LL +M+ + I+P+ TF+ L+D KEGK
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK------------------- 343
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L EA +L DEM+ ++IDPD +T+S L++G C ++ AK++ +M+ + PNVVTY
Sbjct: 344 --LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 368 NSLMDGHCLVSEVNKAKDI 386
++L+ G C V + ++
Sbjct: 402 STLIKGFCKAKRVEEGMEL 420
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 190/368 (51%), Gaps = 25/368 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +++++ P ++ +G ++ L K A+SL +ME I +++V + +I+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A ++ ++ KG +PD T+++LI LC + A + D++ +
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++S L F + + A + +D+++ + D +YS LING C + A
Sbjct: 327 NVVTFSALIDAF----VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ + K P+VV Y+T+I CK K V + L+ EM + ++ N TYT LI+G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
F A + +MV+ + P+ T+NIL+DGLCK GK+ A M+++ +
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA------MVVFEY--- 493
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L+ +T ++PD YT++I+++G+CK GKV+ + + +GV PNV+ Y
Sbjct: 494 --LQRST----------MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 368 NSLMDGHC 375
N+++ G C
Sbjct: 542 NTMISGFC 549
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 53/379 (13%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + ++ + ++ + I+ L K KH A++L +M++ GI ++ T S LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C+ G+ A +L+ ++++ P+ +TF+ LI ++ A + +D+++
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI----- 355
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P D +YS LING C +
Sbjct: 356 --------------KRSIDP--------------------DIFTYSSLINGFCMHDRLDE 381
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + + K P+VV Y+T+I CK K V + L+ EM + ++ N TYT LI+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
GF A + +MV+ + P+ T+NIL+DGLCK GK+ A V +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C G++++ EL + K + P+ ++ ++ G C++G + A ++L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 353 GVMMKQGVKPNVVTYNSLM 371
M + G PN TYN+L+
Sbjct: 562 KKMKEDGPLPNSGTYNTLI 580
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 4/284 (1%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
P+++ F ++ + VK A L +M I ++ T S LIN +C ++ A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ ++ K P+ +T++TLIKG C +V+ ++ ++ +G + V+Y+ L F
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF- 443
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
A +V+ G + ++Y+IL++GLCK G+ A+ + ++ ++
Sbjct: 444 ---FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+ Y +I+ +CK V D + L+ + K + PNV Y +I GFC G +EA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
L +M P++ T+N L+ ++G + + ++ M GF
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
V DA +L+ +MV R P++ + L+ + + + L ++M T I D YT++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 279 LVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKN 324
++ C+ ++ A VL MM + G+C ++ +A L+D+MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
PD +TF+ L+ GL K A ++ M+++G +P++VTY ++++G C +++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
IL N L + + A+ L + P +V + ++ ++ K +L +M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
I +++TY+ I FC QL A +L +M+ +PD T + L++G C ++ A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 293 KNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
++ M +I+G + + EA L+D+MV + PD T+ +V+G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
LCK G + A ++L M K ++ +VV YN+++DG C ++ A
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 227/391 (58%), Gaps = 18/391 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSI+EF K+L+++ KMK + IS +ME G+ N+ T +I+IN
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C C Q+ FA ++L K++K GY P +T +L+ G C ++ A+ D +V G++
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+++ L + A+ + +V +G + D V+Y +INGLCK G+ A
Sbjct: 169 DTVTFTTLV----HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL K+E ++ DVV+Y+T+IDSLCK + V DA NL++EM +K I P+VFTY++LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C G+ +A+ LL +M+ + I+P+ TFN L+D KEGK+ A+ + M
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GFC+ +L EA ++ MV+K+ PD T++ L++G CK KV +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
M ++G+ N VTY +L+ G S+ + A+
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 187/368 (50%), Gaps = 25/368 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + R++ P ++ +G ++ L K A++L ++ME I +++V S +I+
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A ++ ++ KG +PD T+++LI LC + A + D++ +
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+++ L F++ + A + D+++ + + V+Y+ LING C + A
Sbjct: 309 NVVTFNSLIDAFAKE----GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q+ + K PDVV Y T+I+ CK K V D L+ +M + ++ N TYT LI+G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
F A + +MV+ + P+ T+N L+DGLCK GK
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK------------------- 465
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L++A + + + ++PD YT++I+ +G+CK GKV+ ++ + +GVKP+V+ Y
Sbjct: 466 --LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 368 NSLMDGHC 375
N+++ G C
Sbjct: 524 NTMISGFC 531
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 172/382 (45%), Gaps = 53/382 (13%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + N++ + ++ + ++ SL K +H A++L +M++ GI ++ T S LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C+ G+ A +L+ +L++ P+ +TF +LI ++ A + D+++ +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ V+Y+ L F + A Q +V++ D V+Y+ LING CK +
Sbjct: 343 PNIVTYNSLINGFCMH----DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 187 ALQLLRKIEGKL-----------------------------------VQPDVVMYTTIID 211
++L R + + V P+++ Y T++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
LCK+ + A ++ + ++ P+++TY + G C G++++ +L + K + P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMM---------IYGFCIVGQLKE-----ATELL 317
D +N ++ G CK+G + A + M Y I L++ + EL+
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 318 DEMVTKNIDPDAYTFSILVDGL 339
EM + DA T+ ++ D L
Sbjct: 579 KEMRSCRFAGDASTYGLVTDML 600
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 223/379 (58%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++++ P PSI EF K+L+++ KMK + ISL +M+ GI N+ T +ILIN
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C QI A ++L K++K GY+P +T ++L+ G C ++ A+ D +V G+R
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D ++++ L + A+ D +V +G + + V+Y +++NGLCK G A
Sbjct: 189 DTITFTTLI----HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LL K+E ++ +VV+Y+T+IDSLCK + DA NL++EM +K + PNV TY++LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C + +A+ LL +M+ + I+P+ TFN L+D KEGK
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK------------------- 345
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L EA +L DEM+ ++IDPD +T+S L++G C ++ AK++ +M+ + PNVVTY
Sbjct: 346 --LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N+L++G C +++ ++
Sbjct: 404 NTLINGFCKAKRIDEGVEL 422
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 18/339 (5%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA + N++ +++ + ++ SL K +H A++L +ME+ G+ N++T S LI
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C+ + A +L+ ++++ P+ +TF LI ++ A + +D+++ +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D +YS L F + A + ++++ + V+Y+ LING CK +
Sbjct: 363 PDIFTYSSLINGFCMH----DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
++L R++ + + + V YTT+I + + +A ++ +MVS + PN+ TY L+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------GV-- 298
G C G+L++A + + + ++P YT+NI+++G+CK GKV+ ++ GV
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 299 ------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
MI GFC G +EA L +M PD+ T
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DA L+ MV R LP++F + L+ + + L ++M I + YT+NIL+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 281 DGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNID 326
+ C+ ++ A +LG MM + G+C ++ +A L+D+MV
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
PD TF+ L+ GL K A ++ M+++G +PN+VTY +++G C +++ A
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 220/379 (58%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++++ P PSI+EF K+L+++ KMK + ISL +M+ I+ + T +ILIN
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C QI A ++L K++K GY+P +T ++L+ G C ++ A+ D +V G+R
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D ++++ L + A+ D +V +G + + V+Y +++NGLCK G T A
Sbjct: 189 DTITFTTLI----HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL K+E ++ DVV++ TIIDSLCK + V DA NL+ EM +K I PNV TY++LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A++LL +M+ K I+P+ TFN L+D KEGK
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK------------------- 345
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
EA +L D+M+ ++IDPD +T++ LV+G C ++ AK + M+ + P+VVTY
Sbjct: 346 --FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N+L+ G C V ++
Sbjct: 404 NTLIKGFCKSKRVEDGTEL 422
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 188/368 (51%), Gaps = 25/368 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R+++ P+++ +G ++ L K A++L ++ME++ I +++V + +I+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A ++ ++ KG +P+ +T+++LI LC + A Q D++ +
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+++ L F + A + +DD++ + D +Y+ L+NG C + A
Sbjct: 329 NLVTFNALIDAF----VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q+ + K PDVV Y T+I CK K V D L+ EM + ++ + TYT LI G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
G A ++ +MV+ + PD T++IL+DGLC GK
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK------------------- 485
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L++A E+ D M I D Y ++ +++G+CK GKV ++ + +GVKPNVVTY
Sbjct: 486 --LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 368 NSLMDGHC 375
N+++ G C
Sbjct: 544 NTMISGLC 551
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 177/382 (46%), Gaps = 53/382 (13%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + N++ ++ F I+ SL K +H A++L +ME+ GI N+VT S LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C G+ A +L+ +++K P+ +TF LI + A + +DD++
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI----- 357
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P D +Y+ L+NG C +
Sbjct: 358 --------------KRSIDP--------------------DIFTYNSLVNGFCMHDRLDK 383
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q+ + K PDVV Y T+I CK K V D L+ EM + ++ + TYT LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G G A ++ +MV+ + PD T++IL+DGLC GK++ A V M
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C G++ + +L + K + P+ T++ ++ GLC + ++ A +L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 353 GVMMKQGVKPNVVTYNSLMDGH 374
M + G PN TYN+L+ H
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAH 585
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+++ +++ P I + ++ A + M S ++VT + LI +C
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ + ++ +G DT+T+TTLI+GL + A + +V+ G D +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+YSIL + + +++AL+ D + +LD Y+ +I G+CK G+ L
Sbjct: 472 TYSILL----DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ K V+P+VV Y T+I LC +L+ +A+ L +M LPN TY LI
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTF----NILVDG 282
G + EL+ EM + DA T N+L DG
Sbjct: 588 DGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y I+ + D + DA L+ MV R LP++ + L+ + + L ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLK 311
I YT+NIL++ C+ ++ A +LG MM + G+C ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+A L+D+MV PD TF+ L+ GL K A ++ M+++G +PN+VTY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 372 DGHC 375
+G C
Sbjct: 233 NGLC 236
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 222/379 (58%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSI+EF K+L+++ KM + ISL +M++ I ++ + +ILIN
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+P A +VL K++K GY+PD +T ++L+ G C ++ A+ D + ++
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+++ L + A+ D +VA+G + D +Y ++NGLCK G A
Sbjct: 184 NTVTFNTLI----HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL+K+E ++ DVV+YTTIID+LC K V DA NL++EM +K I PNV TY +LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A+ LL +M+ + I+P+ TF+ L+D KEGK
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK------------------- 340
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L EA +L DEM+ ++IDPD +T+S L++G C ++ AK++ +M+ + PNVVTY
Sbjct: 341 --LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N+L+ G C V + ++
Sbjct: 399 NTLIKGFCKAKRVEEGMEL 417
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 185/378 (48%), Gaps = 18/378 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R++ P + +G ++ L K A+SL +ME I +++V + +I+
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+ + A ++ ++ KG +P+ +T+ +LI+ LC + A + D++ +
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++S L F + + A + +D+++ + D +YS LING C + A
Sbjct: 324 NVVTFSALIDAF----VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ + K P+VV Y T+I CK K V + L+ EM + ++ N TY LI G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
G A ++ +MV+ + PD T++IL+DGLCK GK++ A V +
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
MI G C G++++ +L + K + P+ ++ ++ G C++G + A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 354 VMMKQGVKPNVVTYNSLM 371
M + G PN TYN+L+
Sbjct: 560 EMKEDGTLPNSGTYNTLI 577
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 146/297 (49%), Gaps = 4/297 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + + ++ P+++ F ++ + VK A L +M I ++ T S LIN
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C ++ A + ++ K P+ +T+ TLIKG C +V+ ++ ++ +G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+Y+ L + + A + +V+ G D ++YSIL++GLCK G+ + A
Sbjct: 429 NTVTYNTLI----QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L + ++ ++PD+ Y +I+ +CK V D ++L+ + K + PNV YT +I G
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
FC G +EA L EM P++ T+N L+ ++G + ++ M GF
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+++ +++ P I + ++ A + M S N+VT + LI +C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ + ++ ++G +T+T+ TLI+GL A + +V+ G D +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+YSIL + +++AL + + D +Y+I+I G+CK G+ + L
Sbjct: 467 TYSILLDGLCKY----GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ K V+P+V++YTT+I C+ L +A L+ EM LPN TY LI
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
G + EL+ EM + DA T +++++ L
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
D + DA +L+ EMV R LP++ + L+ + + L + M I D Y+
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMV 321
+NIL++ C+ ++ A VLG MM + G+C ++ EA L+D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
P+ TF+ L+ GL K A ++ M+ +G +P++ TY ++++G C +++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 382 KA 383
A
Sbjct: 238 LA 239
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A IF +++ P II + +L L K A+ + ++ S + ++ T +I+I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C G++ + + + KG +P+ I +TT+I G C + A ++ G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ +Y+ L R + + + ++ + GF D + S++IN L K
Sbjct: 568 PNSGTYNTLI----RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Query: 187 ALQLL 191
L++L
Sbjct: 624 YLEML 628
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 224/393 (56%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++++ P P+ I+F ++ +++ + K Y + ME +GI +M T +I+IN
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
CYC ++ FAFSVL + K GY+PDTITF+TL+ G CL +V A+ D +V R
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+ S L + V AL D +V GF+ D+V+Y ++N LCK G + A
Sbjct: 174 DLVTVSTLINGLCLK----GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L L RK+E + ++ VV Y+ +IDSLCKD DA +L++EM K I +V TY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C G+ + ++L EM+ +NI PD TF+ L+D KEGK+ AK + M
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GFC L EA ++ D MV+K +PD T+SIL++ CK +V +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ +G+ PN +TYN+L+ G C ++N AK++
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 200/381 (52%), Gaps = 18/381 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + +R++ P + +G +L L K + A+ L +ME I +++V SI+I+
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G A S+ ++ KG + D +T+++LI GLC + + + +++ +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V++S L F + + A + +++++ +G D ++Y+ LI+G CK A
Sbjct: 314 DVVTFSALIDVF----VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q+ + K +PD+V Y+ +I+S CK K V D L+ E+ SK ++PN TY L+ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG----------KVKGAKNVLG 297
FC G+L A EL EMV++ + P T+ IL+DGLC G K++ ++ LG
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 298 V----MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ ++I+G C ++ +A L + K + PD T+++++ GLCK+G + A +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 354 VMMKQGVKPNVVTYNSLMDGH 374
M + G P+ TYN L+ H
Sbjct: 550 KMKEDGCTPDDFTYNILIRAH 570
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 196/393 (49%), Gaps = 18/393 (4%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A + R + P I F ++ A++L +M ++VT S
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN C G++ A ++ ++++ G+QPD +T+ ++ LC + AL + +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ V YSI+ + AL +++ +G + D V+YS LI GLC G+
Sbjct: 241 IKASVVQYSIVIDSLCK----DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
++LR++ G+ + PDVV ++ +ID K+ + +A LY+EM+++ I P+ TY +L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------GV 298
I GFC L EA ++ D MV+K +PD T++IL++ CK +V + G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 299 M--------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
+ ++ GFC G+L A EL EMV++ + P T+ IL+DGLC G++ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ M K + + YN ++ G C S+V+ A
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 4/273 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
++N ++ P I + ++ K A + M S G ++VT SILIN YC
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ + +I KG P+TIT+ TL+ G C + ++ A + ++V++G V
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y IL + + +AL+ + + L Y+I+I+G+C + A L
Sbjct: 457 TYGILL----DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ K V+PDVV Y +I LCK +++A L+ +M P+ FTY LI
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
L + EL++EM D+ T +++D L
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S L A +F ++ PS++ +G +L L A+ + +M+ S + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+I+I+ C+ ++ A+S+ + KG +PD +T+ +I GLC + A +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
G D +Y+IL R + + + +++ +++ GF D + ++I+ L
Sbjct: 553 EDGCTPDDFTYNILI----RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Query: 182 GQTKPALQLL 191
K L +L
Sbjct: 609 RLDKSFLDML 618
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 223/393 (56%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F + R+ P P +I+F ++ + + + K Y + L QME GI N+ T SI+IN
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C C ++ AFS + KI+K GY+PDT+TF+TLI GLCL +V AL+ D +V G +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++ + L + V A+ D +V GF+ ++V+Y ++ +CK GQT A
Sbjct: 176 TLITLNALV----NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LLRK+E + ++ D V Y+ IID LCKD + +AFNL++EM K ++ YT LI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
FC G+ + +LL +M+ + I PD F+ L+D KEGK++ A+ + M
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GFC QL +A +LD MV+K P+ TF+IL++G CK + +
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M +GV + VTYN+L+ G C + ++ AK++
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 198/381 (51%), Gaps = 18/381 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R++ T P+ + +G +L + K A+ L +ME I + V SI+I+
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + AF++ ++ KG++ D I +TTLI+G C + + D++ +
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V++S L F + ++ A + H +++ +G D V+Y+ LI+G CK Q A
Sbjct: 316 DVVAFSALIDCF----VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L + K P++ + +I+ CK L+ D L+ +M + ++ + TY LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG----------KVKGAKNVLG 297
FC +G+L+ A EL EMV++ + PD ++ IL+DGLC G K++ +K L
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 298 V----MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ ++I+G C ++ +A +L + K + PD T++I++ GLCK+G + A +
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 354 VMMKQGVKPNVVTYNSLMDGH 374
M + G PN TYN L+ H
Sbjct: 552 KMEEDGHSPNGCTYNILIRAH 572
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 4/296 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ +++ TP ++ F ++ VK A L +M GI + VT + LI+ +C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
Q+ A +L ++ KG P+ TF LI G C + L+ + +G D V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ L F ++ A + ++V++ R D VSY IL++GLC G+ + AL++
Sbjct: 424 TYNTLIQGFC----ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
KIE ++ D+ +Y II +C V DA++L+ + K + P+V TY +I G C
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G L EA L +M P+ T+NIL+ EG + ++ + GF +
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 216/373 (57%), Gaps = 25/373 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F ++++ P PSI+EF K+L+++ KM + ISL QM++ GI ++ T SI IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+ A +VLAK++K GY+PD +T ++L+ G C + ++ A+ D +V G++
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +++ L + A+ D +V +G + D V+Y ++NGLCK G A
Sbjct: 187 DTFTFTTLI----HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL K+E ++ +VV++ TIIDSLCK + V A +L++EM +K I PNV TY +LI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A+ LL M+ K I+P+ TFN L+D KEGK
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK------------------- 343
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L EA +L +EM+ ++IDPD T+++L++G C ++ AK + M+ + PN+ TY
Sbjct: 344 --LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 368 NSLMDGHCLVSEV 380
N+L++G C V
Sbjct: 402 NTLINGFCKCKRV 414
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 180/382 (47%), Gaps = 56/382 (14%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + N++ +++ F I+ SL K +H A+ L +ME+ GI N+VT + LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
NC C+ G+ A +L+ +L+K P+ +TF LI ++ A + H++++
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI----- 355
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P D ++Y++LING C +
Sbjct: 356 --------------QRSIDP--------------------DTITYNLLINGFCMHNRLDE 381
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q+ + + K P++ Y T+I+ CK K V D L+ EM + ++ N TYT +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
GF G A + +MV+ + D T++IL+ GLC GK+ A + +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C G++ EA +L + +I PD T++ ++ GLC + ++ A ++
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 353 GVMMKQGVKPNVVTYNSLMDGH 374
M + G PN TYN+L+ +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRAN 580
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
IL N L + + A+ L + P +V + ++ ++ K +L +M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
I +++TY+ I FC QL A +L +M+ +PD T + L++G C ++ A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 293 KNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
++ M +I+G + + EA L+D+MV + PD T+ +V+G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
LCK G + A N+L M +K NVV +N+++D C V A D+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 213/372 (57%), Gaps = 25/372 (6%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
++++ P PSI EF K+L+++ KMK + ISL +M+ GI N+ T +ILINC+C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
I A ++L K++K GY+P +T ++L+ G C ++ A+ D +V G+R D ++++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
L + A+ D +V +G + + V+Y +++NGLCK G A LL K+
Sbjct: 121 LI----HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E ++ DVV++ TIIDSLCK + V DA NL+ EM +K I PNV TY++LI C G+
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEAT 314
+A++LL +M+ K I+P+ TFN L+D KEGK EA
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK---------------------FVEAE 275
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+L D+M+ ++IDPD +T++ L++G C ++ AK + M+ + P++ TYN+L+ G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 375 CLVSEVNKAKDI 386
C V ++
Sbjct: 336 CKSKRVEDGTEL 347
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 25/368 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R+++ P+++ +G ++ L K A +L ++ME++ I +++V + +I+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A ++ ++ KG +P+ +T+++LI LC + A Q D++ +
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+++ L F + A + HDD++ + D +Y+ LING C + A
Sbjct: 254 NLVTFNALIDAF----VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q+ + K PD+ Y T+I CK K V D L+ EM + ++ + TYT LI G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
G A ++ +MV+ + PD T++IL+DGLC GK
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK------------------- 410
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L++A E+ D M I D Y ++ +++G+CK GKV ++ + +GVKPNVVTY
Sbjct: 411 --LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 368 NSLMDGHC 375
N+++ G C
Sbjct: 469 NTMISGLC 476
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 175/382 (45%), Gaps = 53/382 (13%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA + N++ ++ F I+ SL K +H A++L +ME+ GI N+VT S LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C C G+ A +L+ +++K P+ +TF LI + A + HDD++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI----- 282
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+R I P D +Y+ LING C +
Sbjct: 283 --------------KRSIDP--------------------DIFTYNSLINGFCMHDRLDK 308
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q+ + K PD+ Y T+I CK K V D L+ EM + ++ + TYT LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G G A ++ +MV+ + PD T++IL+DGLC GK++ A V M
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C G++ + +L + K + P+ T++ ++ GLC + ++ A +L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 353 GVMMKQGVKPNVVTYNSLMDGH 374
M + G P+ TYN+L+ H
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAH 510
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 35/297 (11%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
P+++ F ++ + VK + A L M I ++ T + LIN +C ++ A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLK-- 138
+ ++ K PD T+ TLIKG C + +V+ + ++ +G D V+Y+ L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 139 -----------FSRRVISPTP------------------VQRALQFHDDVVAQGFRLDQV 169
F + V P +++AL+ D + +LD
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
Y+ +I G+CK G+ L + K V+P+VV Y T+I LC +L+ +A+ L +M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF----NILVDG 282
LP+ TY LI G + EL+ EM + DA T N+L DG
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 224/379 (59%), Gaps = 25/379 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F + ++ P PSIIEF K+L+++ KM + IS +ME GI N+ T +ILIN
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ A ++L K++K GY+PD +T +L+ G C ++ A+ D +V G++
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+++ L + A+ D +V +G + D V+Y ++NGLCK G T A
Sbjct: 182 DTVTFTTLI----HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL K+E ++ +VV+Y+T+IDSLCK + DA NL++EM +K + PNV TY++LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+ +A+ LL +M+ + I+P+ TF+ L+D K+GK
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK------------------- 338
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L +A +L +EM+ ++IDP+ +T+S L++G C ++ AK +L +M+++ PNVVTY
Sbjct: 339 --LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N+L++G C V+K ++
Sbjct: 397 NTLINGFCKAKRVDKGMEL 415
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 180/339 (53%), Gaps = 25/339 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R+++ P ++ +G ++ L K A++L ++ME++ I +N+V S +I+
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C A ++ ++ KG +P+ IT+++LI LC + A + D++ +
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++S L F ++ + +A + +++++ + + +YS LING C + + A
Sbjct: 322 NLVTFSALIDAFVKK----GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
Q+L + K P+VV Y T+I+ CK K V L+ EM + ++ N TYT LI+G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
F A + +MV+ + P+ T+NIL+DGLCK GK+ A M+++ +
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA------MVVFEY--- 488
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
L+ +T ++PD YT++I+++G+CK GK K
Sbjct: 489 --LQRST----------MEPDIYTYNIMIEGMCKAGKWK 515
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y ++ + D + DA L+ M R P++ ++ L+ + + ++M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLK 311
I + YT+NIL++ C+ ++ A +LG MM + GFC ++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+A L+D+MV PD TF+ L+ GL K A ++ M+++G +P++VTY +++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 372 DGHC 375
+G C
Sbjct: 226 NGLC 229
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 218/391 (55%), Gaps = 19/391 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++++ P PSI+EF K+L+++ KM + ISL QM++ GI N+ T SI IN
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C Q+ A ++L K++K GY P +T +L+ G C ++ A+ D +V G++
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+++ L + A+ + +V +G + D V+Y +INGLCK G+ A
Sbjct: 179 DTVTFTTLV----HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L LL K+E ++ DVV+Y TIID LCK K + DAF+L+++M +K I P+VFTY LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C G+ +A+ LL +M+ KNI+PD FN L+D KEGK+ A+ + M
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+I GFC +++E E+ EM + + + T++ L+ G + A+ V
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M+ GV P+++TYN L+DG C V A
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 40/334 (11%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + N++ + ++ + I+ L K KH A L ++ME+ GI ++ T + LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPD--------------------------------- 93
+C C+ G+ A +L+ +L+K PD
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 94 ---TITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
+ + TLIKG C +V+ ++ ++ +G + V+Y+ L F
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF----FQARDCD 408
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
A +V+ G D ++Y+IL++GLC G + AL + ++ + ++ D+V YTT+I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
++LCK V D ++L+ + K + PNV TYT ++ GFC G +EA L EM
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
P++ T+N L+ ++G + ++ M GF
Sbjct: 529 PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 21/248 (8%)
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
SR+V+ + A+ D+V V +S L++ + KM + + L +++
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
+ ++ Y+ I+ C+ ++ A + +M+ P++ T +L+ GFC ++ EA
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLD 318
L+D+MV PD TF LV GL + K EA L++
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS---------------------EAVALVE 204
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
MV K PD T+ +++GLCK G+ A N+L M K ++ +VV YN+++DG C
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 379 EVNKAKDI 386
++ A D+
Sbjct: 265 HMDDAFDL 272
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 222/404 (54%), Gaps = 29/404 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ F+ ++R+ P + ++ K++ V+M AISL +ME I N+ + +ILI
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-- 125
C+C ++ F+ S K+ K G+QPD +TF TL+ GLCL ++ AL +V GF
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 126 ------RLDQVSYSILTLKFSRRVISPTPVQRALQ---FHDDVVAQGFRLDQVSYSILIN 176
++ ++ + + + F+ + R L+ + +V +G +D V+Y ++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 177 GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP 236
G+CKMG TK AL LL K+E ++PDVV+Y+ IID LCKD +DA L+SEM+ K I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
NVFTY +I GFC G+ +A LL +M+ + I+PD TFN L+ KEGK+ A+ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 297 GVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
M MIYGFC + +A + D M + PD TF+ ++D C+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+V +L + ++G+ N TYN+L+ G C V +N A+D+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 179/376 (47%), Gaps = 29/376 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + +++ TH P ++ + I+ L K H+ A L +M GI N+ T + +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G+ A +L ++++ PD +TF LI ++ A + D+++ +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + F + A D + + D V+++ +I+ C+ +
Sbjct: 400 DTVTYNSMIYGFCKH----NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEG 451
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+QLLR+I + + + Y T+I C+ + A +L+ EM+S + P+ T L+YG
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC +L+EA EL + + ID D +NI++ G+CK KV A ++ + I+G
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG---- 567
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
++PD T+++++ G C + + A + M G +P+ TY
Sbjct: 568 -----------------VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 368 NSLMDGHCLVSEVNKA 383
N+L+ G E++K+
Sbjct: 611 NTLIRGCLKAGEIDKS 626
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ K + A + M S ++VT + +I+ YC ++ +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L +I ++G +T T+ TLI G C + A ++++ G D ++ +IL F
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ AL+ + + LD V+Y+I+I+G+CK + A L + V+P
Sbjct: 515 N----EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DV Y +I C ++DA L+ +M P+ TY LI G G++ ++ EL+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 262 DEMVTKNIDPDAYTFNILVD 281
EM + DA+T ++ D
Sbjct: 631 SEMRSNGFSGDAFTIKMVAD 650
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
K + DA + + MV R +I F + + A L +M + I + Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 277 NILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK----------- 311
NIL+ C K+ + + G + +++G C+ ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 312 ----EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
EA L D+MV + P TF+ L++GLC EG+V A ++ M+ +G+ +VVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 368 NSLMDGHCLVSEVNKA 383
++++G C + + A
Sbjct: 265 GTIVNGMCKMGDTKSA 280
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 222/404 (54%), Gaps = 29/404 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ F+ ++R+ P + ++ K++ V+M AISL +ME I N+ + +ILI
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-- 125
C+C ++ F+ S K+ K G+QPD +TF TL+ GLCL ++ AL +V GF
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 126 ------RLDQVSYSILTLKFSRRVISPTPVQRALQ---FHDDVVAQGFRLDQVSYSILIN 176
++ ++ + + + F+ + R L+ + +V +G +D V+Y ++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 177 GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP 236
G+CKMG TK AL LL K+E ++PDVV+Y+ IID LCKD +DA L+SEM+ K I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
NVFTY +I GFC G+ +A LL +M+ + I+PD TFN L+ KEGK+ A+ +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 297 GVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
M MIYGFC + +A + D M + PD TF+ ++D C+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+V +L + ++G+ N TYN+L+ G C V +N A+D+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 179/376 (47%), Gaps = 29/376 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + +++ TH P ++ + I+ L K H+ A L +M GI N+ T + +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G+ A +L ++++ PD +TF LI ++ A + D+++ +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + F + A D + + D V+++ +I+ C+ +
Sbjct: 400 DTVTYNSMIYGFCKH----NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEG 451
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+QLLR+I + + + Y T+I C+ + A +L+ EM+S + P+ T L+YG
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC +L+EA EL + + ID D +NI++ G+CK KV A ++ + I+G
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG---- 567
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
++PD T+++++ G C + + A + M G +P+ TY
Sbjct: 568 -----------------VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 368 NSLMDGHCLVSEVNKA 383
N+L+ G E++K+
Sbjct: 611 NTLIRGCLKAGEIDKS 626
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 8/264 (3%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ K + A + M S ++VT + +I+ YC ++ +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L +I ++G +T T+ TLI G C + A ++++ G D ++ +IL F
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ AL+ + + LD V+Y+I+I+G+CK + A L + V+P
Sbjct: 515 N----EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DV Y +I C ++DA L+ +M P+ TY LI G G++ ++ EL+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 262 DEMVTKNIDPDAYTFNILVDGLCK 285
EM + DA+T + + +C+
Sbjct: 631 SEMRSNGFSGDAFTIKMAEEIICR 654
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
K + DA + + MV R +I F + + A L +M + I + Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 277 NILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK----------- 311
NIL+ C K+ + + G + +++G C+ ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 312 ----EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
EA L D+MV + P TF+ L++GLC EG+V A ++ M+ +G+ +VVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 368 NSLMDGHCLVSEVNKA 383
++++G C + + A
Sbjct: 265 GTIVNGMCKMGDTKSA 280
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 221/393 (56%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++R+ P PS+++F + +++ + K + + Q+E +GI N+ T +I+IN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C + FA+SVL K++K GY+PDT TF TLIKGL L +V A+ D +V G +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + R AL + + + D +YS +I+ LC+ G A
Sbjct: 192 DVVTYNSIVNGICR----SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L +++E K ++ VV Y +++ LCK D L +MVS+ I+PNV T+ L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
F G+L+EA EL EM+T+ I P+ T+N L+DG C + ++ A N+L +M
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I G+C+V ++ + ++ + + + +A T+SILV G C+ GK+K A+ +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+ GV P+V+TY L+DG C ++ KA +I
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 196/381 (51%), Gaps = 18/381 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + +R++ P ++ + I+ + + A+ L +ME + +++ T S +I+
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G I A S+ ++ KG + +T+ +L++GLC + D+V++
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +++++L F + +Q A + + +++ +G + ++Y+ L++G C + A
Sbjct: 297 NVITFNVLLDVF----VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L + PD+V +T++I C K V D ++ + + ++ N TY+ L+ G
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV----------LG 297
FC G++K A EL EMV+ + PD T+ IL+DGLC GK++ A + LG
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 298 VMM----IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
++M I G C G++++A L + K + P+ T+++++ GLCK+G + A +L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 354 VMMKQGVKPNVVTYNSLMDGH 374
M + G PN TYN+L+ H
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAH 553
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 152/283 (53%), Gaps = 4/283 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++I F +L VK A L +M + GI N++T + L++ YC ++ A ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L +++ PD +TFT+LIKG C+ +V ++ ++ +G + V+YSIL F +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ A + ++V+ G D ++Y IL++GLC G+ + AL++ ++ +
Sbjct: 416 ----SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+VMYTTII+ +CK V DA+NL+ + K + PNV TYT +I G C G L EA LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+M P+ T+N L+ ++G + + ++ M GF
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
M + L A + + ++R +P I+ F ++ +K + + + G+++N V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
T SIL+ +C G+I A + +++ G PD +T+ L+ GLC N ++++AL+ +D+
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
Q ++D L V Y+ +I G+CK
Sbjct: 465 --QKSKMD-------------------------------------LGIVMYTTIIEGMCK 485
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
G+ + A L + K V+P+V+ YT +I LCK +++A L +M PN T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
Y LI G L + +L++EM + DA + +++D L
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DA L+ EM+ R LP++ ++ Q + ++ I + YT NI++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 281 DGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNID 326
+ C+ K A +VLG +M I G + G++ EA L+D MV
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
PD T++ +V+G+C+ G A ++L M ++ VK +V TY++++D C
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 214/393 (54%), Gaps = 21/393 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ + P PSII+F K+L + KMK + I+L ++ G+ ++ T ++L+N
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q A S L K++K G++PD +TFT+LI G CL +++ A+ + +V G +
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y+ + + V AL D + G R D V Y+ L+NGLC G+ + A
Sbjct: 176 DVVMYTTIIDSLCKN----GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LLR + + ++PDV+ + +ID+ K+ DA LY+EM+ I PN+FTYT+LI G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
FC+ G + EA ++ M TK PD + L++G CK KV A + M
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GF VG+ A E+ MV++ + P+ T+++L+ LC GKVK A +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 354 VMMKQ---GVKPNVVTYNSLMDGHCLVSEVNKA 383
M K+ GV PN+ TYN L+ G C ++ KA
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 174/358 (48%), Gaps = 18/358 (5%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A+S S ++ S + ++ H Q A + +++ P I FT L+
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
+ + + D + G D + ++L F + S P A F ++
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQ---SSQPYL-ASSFLGKMMKL 136
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
GF D V+++ LING C + + A+ ++ ++ ++PDVVMYTTIIDSLCK+ V A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+L+ +M + I P+V YT+L+ G C G+ ++A LL M + I PD TFN L+D
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 283 LCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPD 328
KEGK A+ + M +I GFC+ G + EA ++ M TK PD
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ L++G CK KV A + M ++G+ N +TY +L+ G V + N A+++
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P +I F ++ + VK + A L ++M I N+ T + LIN +C G + A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ KG PD + +T+LI G C +V A++ ++ +G + ++Y+ L F +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL---LRKIEGKL 198
V P Q +V++G + +Y++L++ LC G+ K AL + ++K E
Sbjct: 365 -VGKPNVAQEVFS---HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
V P++ Y ++ LC + + A ++ +M + + + TYT +I G C G++K A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
L + +K + P+ T+ ++ GL +EG
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
++N ++R P+I + ++ A + + ME+ G ++V + LIN +C
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ A + ++ +KG +TIT+TTLI+G + A + +V++G +
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVS-----YSILINGLCKMGQTK 185
+Y++L + V++AL +D+ Q +D V+ Y++L++GLC G+ +
Sbjct: 389 TYNVLL----HCLCYNGKVKKALMIFEDM--QKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
AL + + + + ++ YT II +CK V +A NL+ + SK + PNV TYT +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 246 YGFCIVGQLKEATELLDEM 264
G G EA L +M
Sbjct: 503 SGLFREGLKHEAHVLFRKM 521
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 212/390 (54%), Gaps = 18/390 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F +++ P PSI +F ++L+++ KMK Y I L QM+ GI N+ T +IL+NC+C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
Q+ A S L K++K G++P +TF +L+ G C +V AL D +V G++ + V
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+ + + V AL + + G D V+Y+ LI+GLC G+ A ++
Sbjct: 188 IYNTIIDGLCK----SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ + + + PDV + +ID+ K+ V++A Y EM+ + + P++ TY+ LIYG C+
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------- 299
+L EA E+ MV+K PD T++IL++G CK KV+ + M
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
+I G+C G+L A E+ MV + P+ T+++L+ GLC GK++ A +L M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 357 KQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K G+ ++VTYN ++ G C EV A DI
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 156/320 (48%), Gaps = 39/320 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+++F++++ P+++ + I+ L K K A+ L ++ME GI ++VT + LI+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 68 CYCHLGQIP------------------FAFSVL-----------------AKILKKGYQP 92
C G+ F F+ L +++++ P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA 152
D +T++ LI GLC+ +++ A + +V++G D V+YSIL + + V+
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK----SKKVEHG 345
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
++ ++ +G + V+Y+ILI G C+ G+ A ++ R++ V P+++ Y ++
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
LC + + A + ++M + ++ TY +I G C G++ +A ++ + + + PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 273 AYTFNILVDGLCKEGKVKGA 292
+T+ ++ GL K+G + A
Sbjct: 466 IWTYTTMMLGLYKKGLRREA 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 126/251 (50%), Gaps = 4/251 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + F ++ + VK A +M + ++VT S+LI C ++ A +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ KG PD +T++ LI G C + +V+ ++ ++ +G + V+Y+IL + R
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ A + +V G + ++Y++L++GLC G+ + AL +L ++ +
Sbjct: 374 ----AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D+V Y II +CK V DA+++Y + + ++P+++TYT ++ G G +EA L
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 262 DEMVTKNIDPD 272
+M I P+
Sbjct: 490 RKMKEDGILPN 500
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L +A IF R++ P+II + +L L A+ + M+ +G+ +++VT +I
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGL 104
+I C G++ A+ + + +G PD T+TT++ GL
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 220/390 (56%), Gaps = 18/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+ ++++ P PSI++F ++L+++VK+K Y ISL +ME GI +++ T +I+IN
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C Q+ A S+L K+LK GY+PD +T +L+ G C +V A+ D +V G++
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + + V A F ++ +G R + V+Y+ L+NGLC + A
Sbjct: 189 DIVAYNAIIDSLCK----TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+LL + K + P+V+ Y+ ++D+ K+ V +A L+ EMV I P++ TY++LI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C+ ++ EA ++ D MV+K D ++N L++G CK +V+ + M
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I GF G + +A E +M I PD +T++IL+ GLC G+++ A +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M K+ + ++VTY +++ G C +V +A
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 184/369 (49%), Gaps = 25/369 (6%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ I ++L+ P + G ++ + A+SL +M G ++V + +I
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ C ++ AF +I +KG +P+ +T+T L+ GLC +++ A + D++ +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ ++YS L F + V A + +++V D V+YS LINGLC +
Sbjct: 258 PNVITYSALLDAF----VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q+ + K DVV Y T+I+ CK K V D L+ EM + ++ N TY LI
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
GF G + +A E +M I PD +T+NIL+ GLC
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-------------------- 413
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G+L++A + ++M + +D D T++ ++ G+CK GKV+ A ++ + +G+KP++VT
Sbjct: 414 -GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 367 YNSLMDGHC 375
Y ++M G C
Sbjct: 473 YTTMMSGLC 481
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 179/371 (48%), Gaps = 28/371 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + ++++ P I+ + I+ SL K K A ++E GI N+VT + L+N
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+ + A +L+ ++KK P+ IT++ L+ N +V A + +++V
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+YS L + + A Q D +V++G D VSY+ LING CK + +
Sbjct: 294 DIVTYSSLI----NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L R++ + + + V Y T+I + V A +S+M I P+++TY L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C G+L++A + ++M + +D D T+ ++ G+CK GKV
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV------------------ 451
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+EA L + K + PD T++ ++ GLC +G + + + M ++G+ N T
Sbjct: 452 ---EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT- 507
Query: 368 NSLMDGHCLVS 378
L DG +S
Sbjct: 508 --LSDGDITLS 516
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 223/419 (53%), Gaps = 50/419 (11%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F +++++ P PSI++F K+L+ + K K+Y ISL H ME GI ++ + +I+INC C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A SV+ K++K GY+PD +T ++LI G C +V A+ + GFR D V
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+ + + S ++ V A++ D + G R D V+Y+ L+ GLC G+ A +L
Sbjct: 176 IYNTI-IDGSCKI---GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+R + + + P+V+ +T +ID K+ ++A LY EM + + P+VFTY +LI G C+
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE------------------------ 286
G++ EA ++LD MVTK PD T+N L++G CK
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 287 -----------GKVKGAKNVLGVM-----------MIYGFCIVGQLKEATELLDEMVTKN 324
G+ A+ + M ++YG C+ ++++A L + M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
I+ D T++I++ G+CK G V+ A ++ + +G+KP+VV+Y +++ G C + +K+
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 28/292 (9%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F+R+ R + + ++ L + A L M I+ N++T + +I+
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G+ A + ++ ++ PD T+ +LI GLC++ +V A Q D +V +G
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 128 DQVSYSILTLKF--SRRVISPTPVQRALQFHD--------DVVAQGF------------- 164
D V+Y+ L F S+RV T + R + + + QG+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 165 -RLDQV----SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLV 219
R+D +YSIL+ GLC + + AL L ++ ++ D+ Y +I +CK V
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
DA++L+ + K + P+V +YT +I GFC Q ++ L +M + P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 218/393 (55%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F R++ + P PSII+F ++L+ + KM Y ISL QM+ GI + T +I+++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C C Q A L K++K G++PD +TFT+L+ G C +++ A+ D ++ GF+
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+Y+ L R + + A++ + + G R + V+Y+ L+ GLC++G+ A
Sbjct: 187 NVVTYTTLI----RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LLR + + ++P+V+ +T +ID+ K + +A LY+ M+ + P+VFTY +LI G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV------------KG--AK 293
C+ G L EA ++ M P+ + L+ G CK +V KG A
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ ++I G+C+VG+ A E+ ++M ++ PD T+++L+DGLC GKV+ A +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M K+ + N+VTY ++ G C + +V A D+
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L AV +FN++ P+++ + ++T L ++ + A L M I N++T +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ + +G++ A + +++ PD T+ +LI GLC+ + A Q + G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
++V Y+ L F + V+ ++ ++ +G + ++Y++LI G C +G+
Sbjct: 324 CYPNEVIYTTLIHGFCK----SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A ++ ++ + PD+ Y ++D LC + V A ++ M + + N+ TYT +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
I G C +G++++A +L + +K + P+ T+ ++ G C+ G + A ++ M GF
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
IL NGL + Q AL L ++ P ++ +T ++ + K +L+ +M
Sbjct: 54 ILRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
I P + T +++ C+ Q A+ L +M+ +PD TF L++G C +++ A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 293 KNVLGVMMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+ ++ GF C L A EL ++M T P+ T++ LV G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
LC+ G+ A +L MMK+ ++PNV+T+ +L+D V ++ +AK++
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+FN++ P I + +L L A+ + M + N+VT +I+I C
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
LG++ AF + + KG +P+ IT+TT+I G C + A + GF ++
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Query: 131 SY 132
Y
Sbjct: 505 VY 506
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 218/390 (55%), Gaps = 18/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F +L++ P PSI++F ++LT + KM + I L H+ME+ GI ++ + +ILI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ A ++L K++K G++P +T +L+ G C + Q A+ D + GF
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V Y+ + + + AL+ + +G R D V+Y+ LI+GL G+ A
Sbjct: 183 NVVIYNTVINGLCKN----RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+LLR + + + P+V+ +T +ID+ K+ + +A NLY EM+ + ++PNVFTY +LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
FCI G L +A + D MV+K PD T+N L+ G CK +V+ + M
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I+G+C G+L A ++ + MV + PD T++IL+D LC GK++ A ++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ K + +++TYN ++ G C ++ +A
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 182/378 (48%), Gaps = 20/378 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PSI+ G +L + + A+SL M+ G + N+V + +IN C + A V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ KKG + D +T+ TLI GL + + A + D+V + + + ++ L F
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF-- 264
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + A + +++ + + +Y+ LING C G A + + K P
Sbjct: 265 --VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DVV Y T+I CK K V D L+ EM + ++ + FTY LI+G+C G+L A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGA--------KNVLGV------MMIYGFCIV 307
+ MV + PD T+NIL+D LC GK++ A K+ + V ++I G C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+LKEA L + K + PDA + ++ GLC++G + A + M + G P+ Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 368 NSLMDGH--CLVSEVNKA 383
+ + H L +E+ KA
Sbjct: 503 DETLRDHYTSLSAELIKA 520
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
V ++ ++ + KM + + L K+E + D+ +T +I C+ ++ A L +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M+ P++ T +L+ GFC + +EA L+D M P+ +N +++GLCK
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
+ A V M +I G G+ +A LL +MV + IDP+ F+
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
L+D KEG + A+N+ M+++ V PNV TYNSL++G C+ + AK
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
DAF+L+ EM+ R +P++ +T ++ + + L +M I D Y+F IL+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 281 DGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNID 326
C+ ++ A +LG MM + GFC + +EA L+D M
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
P+ ++ +++GLCK + A V M K+G++ + VTYN+L+ G
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 207/393 (52%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F ++ + P PSI++F ++LT+ ++ Y T I S +ME GI ++ + +ILI+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ FA SVL K++K GY+P +TF +L+ G CL ++ A +V G+
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V Y+ L + + AL+ +++ +G D V+Y+ L+ GLC G+ A
Sbjct: 175 NVVVYNTLIDGLCKN----GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LR + + + PDVV +T +ID K + +A LY EM+ + PN TY ++I G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
C+ G+L +A + D M +K P+ T+N L+ G CK V + M
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I+G+C VG+L+ A ++ MV++ + PD T IL+ GLC G+++ A
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M + +V YN ++ G C +V KA ++
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 192/372 (51%), Gaps = 18/372 (4%)
Query: 3 SFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTS 62
S L A+ + ++++ PSI+ FG +L + A SL M SG N+V
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ LI+ C G++ A +L ++ KKG D +T+ TL+ GLC + + A + D++
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ D V+++ L F + + A + + +++ + V+Y+ +INGLC G
Sbjct: 240 RSINPDVVTFTALIDVF----VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A + + K P+VV Y T+I CK ++V + L+ M + ++FTY
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA---------- 292
LI+G+C VG+L+ A ++ MV++ + PD T IL+ GLC G+++ A
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 293 KNVLGV----MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
+ +G+ +MI+G C ++++A EL + + + PDA T++I++ GLCK G + A
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 349 KNVLGVMMKQGV 360
++ M ++G+
Sbjct: 476 DELIRRMKEEGI 487
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 203/390 (52%), Gaps = 18/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F + +HP PSI++F ++L ++ K+ Y ISL +E GI ++ + + LI+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C+C ++ A S L K++K G++P +TF +L+ G C + A+ D +V G+
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V Y+ + + V AL + G R D V+Y+ LI L G +
Sbjct: 183 NVVIYNTIIDSLCEK----GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L + + PDV+ ++ +ID K+ + +A Y+EM+ + + PN+ TY +LI G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
CI G L EA ++L+ +V+K P+A T+N L++G CK +V +L VM
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ G+C G+ A ++L MV+ + PD YTF+IL+DGLC GK+ A L
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ K ++TYN ++ G C +V A
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
DA L+ +M LP++ ++ L+ + + + L + I D Y+F L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 280 VDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNI 325
+D C+ ++ A + LG MM + GFC V + EA L+D++V
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+P+ ++ ++D LC++G+V A +VL M K G++P+VVTYNSL+
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 205/380 (53%), Gaps = 19/380 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + F ++ +L + AI + M S G++ + T + ++ Y G + A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ-GFRLDQVSYSILTLKFS 140
++++ G ++ ++ G C +V+ AL F ++ Q GF DQ +++ L
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV---- 302
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ V+ A++ D ++ +G+ D +Y+ +I+GLCK+G+ K A+++L ++ +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+ V Y T+I +LCK+ V +A L + SK ILP+V T+ +LI G C+ + A EL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
+EM +K +PD +T+N+L+D LC +GK+ A N+L M +I GFC
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+ +EA E+ DEM + ++ T++ L+DGLCK +V+ A ++ M+ +G KP+ T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
YNSL+ C ++ KA DI
Sbjct: 543 YNSLLTHFCRGGDIKKAADI 562
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 190/382 (49%), Gaps = 20/382 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ I + +L+ P + + +++ L K+ A+ + QM + N VT + LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C Q+ A + + KG PD TF +LI+GLCL + A++ +++ ++G
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D+ +Y++L + S + AL + G ++Y+ LI+G CK +T+ A
Sbjct: 434 DEFTYNMLI----DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ ++E V + V Y T+ID LCK + V DA L +M+ + P+ +TY +L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--- 304
FC G +K+A +++ M + +PD T+ L+ GLCK G+V+ A +L + + G
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 305 ------CIVGQLK-----EATELLDEMVTKN-IDPDAYTFSILVDGLCK-EGKVKGAKNV 351
I G + EA L EM+ +N PDA ++ I+ GLC G ++ A +
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 352 LGVMMKQGVKPNVVTYNSLMDG 373
L ++++G P + L +G
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEG 691
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 6/280 (2%)
Query: 6 RLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
R+A+ +F + P + ++ SL A+++ QME SG +++T + L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
I+ +C + A + ++ G +++T+ TLI GLC + +V+ A Q D ++ +G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
+ D+ +Y+ L F R +++A + + G D V+Y LI+GLCK G+ +
Sbjct: 537 KPDKYTYNSLLTHFCR----GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTAL 244
A +LLR I+ K + Y +I L + + T+A NL+ EM+ + P+ +Y +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 245 IYGFCIVG-QLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
G C G ++EA + L E++ K P+ + +L +GL
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 15/203 (7%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
++PDV + +I +LC+ + A + +M S ++P+ T+T ++ G+ G L A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYG 303
+ ++MV + N++V G CKEG+V+ A N + M ++ G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
C G +K A E++D M+ + DPD YT++ ++ GLCK G+VK A VL M+ + PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 364 VVTYNSLMDGHCLVSEVNKAKDI 386
VTYN+L+ C ++V +A ++
Sbjct: 365 TVTYNTLISTLCKENQVEEATEL 387
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 205/394 (52%), Gaps = 20/394 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +++ + PSI F +L+ L + A+ L ++M + N VT +++I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G + AF L ++ +KG PDT ++ LI GLCL Q A F D + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+++ Y+ L F R ++ AL ++V +G LD V Y +LI+G K K
Sbjct: 611 NEICYTGLLHGFCRE----GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LL+++ + ++PD V+YT++ID+ K +AF ++ M+++ +PN TYTA+I G
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV-------------KG--A 292
C G + EA L +M + P+ T+ +D L K G+V KG A
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLA 785
Query: 293 KNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
M+I GFC G+++EA+EL+ M+ + PD T++ +++ LC+ VK A +
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++G++P+ V YN+L+ G C+ E+ KA ++
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 184/376 (48%), Gaps = 18/376 (4%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + +L LVK +H+ A+ L + M S GI ++ + +I C L + A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+A + G + + + LI GLC +V A+ D+ + + D V+Y L +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ L+ D+++ F + + S L+ GL K G+ + AL L++++ V P
Sbjct: 310 ----VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
++ +Y +IDSLCK + +A L+ M + PN TY+ LI FC G+L A L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
EMV + Y +N L++G CK G + A+ + M ++ G+C
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G++ +A L EM K I P YTF+ L+ GL + G ++ A + M + VKPN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 368 NSLMDGHCLVSEVNKA 383
N +++G+C +++KA
Sbjct: 546 NVMIEGYCEEGDMSKA 561
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 181/366 (49%), Gaps = 18/366 (4%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P ++ + ++ L K++ + + + +M + S L+ G+I A ++
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ +++ G P+ + LI LC + A D + G R + V+YSIL F R
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
R + AL F ++V G +L Y+ LING CK G A + ++ K ++P
Sbjct: 415 R----GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
VV YT+++ C + A LY EM K I P+++T+T L+ G G +++A +L
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
+EM N+ P+ T+N++++G C+EG + A L M +I+G C+
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
GQ EA +D + N + + ++ L+ G C+EGK++ A +V M+++GV ++V Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 368 NSLMDG 373
L+DG
Sbjct: 651 GVLIDG 656
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 45/422 (10%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ +FN ++ P + + ++ SL ++K A + ME++G N+V ++LI
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ C ++ A + + K +PD +T+ TL+ GLC + + L+ D+++ F
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 127 LDQVSYSIL------------TLKFSRRV----ISPT---------PVQRALQFH----- 156
+ + S L L +RV +SP + + +FH
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 157 -DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
D + G R + V+YSILI+ C+ G+ AL L ++ ++ V Y ++I+ CK
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
++ A +EM++K++ P V TYT+L+ G+C G++ +A L EM K I P YT
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 276 FNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMV 321
F L+ GL + G ++ A + M MI G+C G + +A E L EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
K I PD Y++ L+ GLC G+ AK + + K + N + Y L+ G C ++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 382 KA 383
+A
Sbjct: 630 EA 631
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 183/379 (48%), Gaps = 18/379 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F+R+ + P+ + + ++ + TA+S +M +G+ ++ + LIN
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G I A +A+++ K +P +T+T+L+ G C ++ +AL+ + ++ +G
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+++ L R + ++ A++ +++ + ++V+Y+++I G C+ G A
Sbjct: 506 SIYTFTTLLSGLFRAGL----IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L+++ K + PD Y +I LC ++A + N YT L++G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD------------GLCKEGKVKGAK-- 293
FC G+L+EA + EMV + +D D + +L+D GL KE +G K
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+V+ MI G KEA + D M+ + P+ T++ +++GLCK G V A+ +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 354 VMMKQGVKPNVVTYNSLMD 372
M PN VTY +D
Sbjct: 742 KMQPVSSVPNQVTYGCFLD 760
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 156/313 (49%), Gaps = 18/313 (5%)
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
I K P+ T + L+ GL A++ +D+V+ G R D Y+ + R +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI----RSLC 238
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
+ RA + + A G ++ V Y++LI+GLCK + A+ + + + GK ++PDVV
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
Y T++ LCK + + EM+ R P+ ++L+ G G+++EA L+ +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAK--------------NVLGVMMIYGFCIVGQL 310
V + P+ + +N L+D LCK K A+ +V ++I FC G+L
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
A L EMV + Y ++ L++G CK G + A+ + M+ + ++P VVTY SL
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 371 MDGHCLVSEVNKA 383
M G+C ++NKA
Sbjct: 479 MGGYCSKGKINKA 491
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 131/247 (53%), Gaps = 14/247 (5%)
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIID 211
A++ +D+V+ G R D Y+ +I LC++ A +++ +E ++V Y +ID
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
LCK + V +A + ++ K + P+V TY L+YG C V + + E++DEM+ P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELL 317
+ LV+GL K GK++ A N++ ++ +G C + EA L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
D M + P+ T+SIL+D C+ GK+ A + LG M+ G+K +V YNSL++GHC
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 378 SEVNKAK 384
+++ A+
Sbjct: 451 GDISAAE 457
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 24 IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
++ +G ++ +K K L +M G+ + V + +I+ G AF +
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++ +G P+ +T+T +I GLC V A + +QV+Y ++
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-- 764
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
+Q+A++ H+ ++ +G + +Y++LI G C+ G+ + A +L+ ++ G V PD
Sbjct: 765 -GEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
+ YTT+I+ LC+ V A L++ M K I P+ Y LI+G C+ G++ +ATEL +E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 264 MVTKNIDPDAYT 275
M+ + + P+ T
Sbjct: 883 MLRQGLIPNNKT 894
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
+GF S+ ILI+ L K PA LL+ + + ++P +D
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP------------------SD 139
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILV 280
FN+ K L + ++ LI + ++ + + M+TK ++ P+ T + L+
Sbjct: 140 VFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALL 199
Query: 281 DGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
GL K +G A EL ++MV+ I PD Y ++ ++ LC
Sbjct: 200 HGLVK-------------FRHFGL--------AMELFNDMVSVGIRPDVYIYTGVIRSLC 238
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ + AK ++ M G N+V YN L+DG C +V +A
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 163/316 (51%), Gaps = 57/316 (18%)
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
+++ G +PD +TFTTL+ GLC +V +AL D +V +G +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------------------ 42
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
Y +INGLCKMG T+ AL LL K+E ++ VV
Sbjct: 43 -------------------------PYGTIINGLCKMGDTESALNLLSKMEETHIKAHVV 77
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+Y IID LCKD A NL++EM K I P+V TY+ +I FC G+ +A +LL +M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQL 310
+ + I+PD TF+ L++ L KEGKV A+ + G M MI GFC +L
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+A +LD M +K+ PD TFS L++G CK +V + M ++G+ N VTY +L
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 371 MDGHCLVSEVNKAKDI 386
+ G C V +++ A+D+
Sbjct: 258 IHGFCQVGDLDAAQDL 273
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 152/289 (52%), Gaps = 8/289 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + +R++ P +G I+ L KM +A++L +ME + I +++V + +I+
Sbjct: 29 ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G A ++ ++ KG PD IT++ +I C + + A Q D++ +
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V++S L ++ V A + + D++ +G ++Y+ +I+G CK + A
Sbjct: 145 DVVTFSALI----NALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L + K PDVV ++T+I+ CK K V + ++ EM + I+ N TYT LI+G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
FC VG L A +LL+ M++ + P+ TF ++ LC + +++ A +L
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 202/387 (52%), Gaps = 18/387 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F ++L + + + F K+L L K L ++ G++ N+ T ++ I C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G++ A ++ ++++G +PD IT+ LI GLC N++ Q A + +V +G D
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ L + + + VQ A + D V GF DQ +Y LI+GLC G+T AL L
Sbjct: 323 TYNTLIAGYCKGGM----VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ GK ++P+V++Y T+I L ++ +A L +EM K ++P V T+ L+ G C
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------- 299
+G + +A L+ M++K PD +TFNIL+ G + K++ A +L VM
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
++ G C + ++ E MV K P+ +TF+IL++ LC+ K+ A +L M
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 357 KQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ V P+ VT+ +L+DG C +++ A
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 195/429 (45%), Gaps = 54/429 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + L+ P P +I + ++ L K + A +M + G+ + T + LI
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G + A ++ + G+ PD T+ +LI GLC + RAL ++ + +G +
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ + Y+ L S + + + A Q +++ +G + +++IL+NGLCKMG A
Sbjct: 390 NVILYNTLIKGLSNQGM----ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 188 LQLLR-------------------------KIEGKL----------VQPDVVMYTTIIDS 212
L++ K+E L V PDV Y ++++
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
LCK D Y MV K PN+FT+ L+ C +L EA LL+EM K+++PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYGFCIVGQLKEATELL 317
A TF L+DG CK G + GA + M +I+ F + A +L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
EMV + + PD YT+ ++VDG CK G V L MM+ G P++ T +++ C+
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 378 SEVNKAKDI 386
V +A I
Sbjct: 686 DRVYEAAGI 694
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 198/435 (45%), Gaps = 61/435 (14%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV- 60
S + A ++ R+ TP + F + S K A+ L + M S G N+V
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 61 ----------------------------------TSSILINCYCHLGQIPFAFSVLAKIL 86
T + L+ C G + +L K++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K+G P+ T+ I+GLC ++ A++ ++ QG + D ++Y+ L +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN---- 299
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV----QPD 202
+ Q A + +V +G D +Y+ LI G CK G +QL +I G V PD
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM----VQLAERIVGDAVFNGFVPD 355
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
Y ++ID LC + A L++E + K I PNV Y LI G G + EA +L +
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVG 308
EM K + P+ TFNILV+GLCK G V A ++ VM +I+G+
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
+++ A E+LD M+ +DPD YT++ L++GLCK K + M+++G PN+ T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 369 SLMDGHCLVSEVNKA 383
L++ C ++++A
Sbjct: 536 ILLESLCRYRKLDEA 550
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 194/393 (49%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F R+ P++ + I++ LV ++ A + +M GI ++ + +I +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + A +L + +G + + + + T++ G + ++A G L
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+++ K R + V+ + D V+ +G + +Y++ I GLC+ G+ A
Sbjct: 215 CLSTFN----KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++++ + + +PDV+ Y +I LCK+ +A +MV++ + P+ +TY LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV------------KGAKN- 294
+C G ++ A ++ + V PD +T+ L+DGLC EG+ KG K
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 295 -VLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+L +I G G + EA +L +EM K + P+ TF+ILV+GLCK G V A ++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
VM+ +G P++ T+N L+ G+ ++ A +I
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 19/337 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +FN L P++I + ++ L A L+++M G+I + T +IL+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C +G + A ++ ++ KGY PD TF LI G +++ AL+ D ++ G
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +Y+ L + + + ++ + +V +G + +++IL+ LC+ + A
Sbjct: 495 DVYTYNSLL----NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIY 246
L LL +++ K V PD V + T+ID CK+ + A+ L+ +M + ++ + TY +I+
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF-- 304
F + A +L EMV + + PD YT+ ++VDG CK G V L MM GF
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 305 ------------CIVGQLKEATELLDEMVTKNIDPDA 329
C+ ++ EA ++ MV K + P+A
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 18/319 (5%)
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
Y G++ A +V ++ +P ++ ++ L + +A + + + +G D
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 129 QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
S++I F + + P AL+ +++ +QG ++ V+Y ++ G +
Sbjct: 146 VYSFTIRMKSFCK---TSRP-HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+L K+ V + + ++ LCK V + L +++ + +LPN+FTY I G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------- 299
C G+L A ++ ++ + PD T+N L+ GLCK K + A+ LG M
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 300 -----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
+I G+C G ++ A ++ + V PD +T+ L+DGLC EG+ A +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 355 MMKQGVKPNVVTYNSLMDG 373
+ +G+KPNV+ YN+L+ G
Sbjct: 382 ALGKGIKPNVILYNTLIKG 400
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 111/219 (50%), Gaps = 14/219 (6%)
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
+ G+ + A+ + +++ +P V Y I+ L A +Y M + I P+V+
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
++T + FC + A LL+ M ++ + + + +V G +E + G M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 300 MIYG--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
+ G C G +KE +LLD+++ + + P+ +T+++ + GLC+ G++
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
GA ++G +++QG KP+V+TYN+L+ G C S+ +A+
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 208/396 (52%), Gaps = 18/396 (4%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+ A +F +L + +P++ + ++ + A++L +ME+ G + N+VT +
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ YC L +I F +L + KG +P+ I++ +I GLC +++ ++ +G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ LD+V+Y+ L + + +AL H +++ G ++Y+ LI+ +CK G
Sbjct: 306 YSLDEVTYNTLIKGYCKE----GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A++ L ++ + + P+ YTT++D + + +A+ + EM P+V TY AL
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----- 299
I G C+ G++++A +L++M K + PD +++ ++ G C+ V A V M
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 300 ---------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
+I GFC + KEA +L +EM+ + PD +T++ L++ C EG ++ A
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ M+++GV P+VVTY+ L++G S +AK +
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 199/405 (49%), Gaps = 60/405 (14%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++I + ++ L + + +M G + VT + LI YC G A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
A++L+ G P IT+T+LI +C + RA++F D + +G ++ +Y+ L FS+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 142 --------RVI--------SPTPV---------------QRALQFHDDVVAQGFRLDQVS 170
RV+ SP+ V + A+ +D+ +G D VS
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
YS +++G C+ AL++ R++ K ++PD + Y+++I C+ + +A +LY EM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
+ P+ FTYTALI +C+ G L++A +L +EMV K + PD T+++L++GL K+ + +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 291 GAKNVL-----------------------------GVMMIYGFCIVGQLKEATELLDEMV 321
AK +L V +I GFC+ G + EA ++ + M+
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
KN PD ++I++ G C+ G ++ A + M+K G + VT
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 197/381 (51%), Gaps = 18/381 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A+ +F+++ P+++ + ++ K++ L M G+ N+++ +++I
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
N C G++ VL ++ ++GY D +T+ TLIKG C +AL H +++ G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
++Y+ L + + RA++F D + +G ++ +Y+ L++G + G
Sbjct: 343 PSVITYTSLI----HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A ++LR++ P VV Y +I+ C + DA + +M K + P+V +Y+ ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
GFC + EA + EMV K I PD T++ L+ G C++ + K A ++ M
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+I +C+ G L++A +L +EMV K + PD T+S+L++GL K+ + + AK +L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 353 GVMMKQGVKPNVVTYNSLMDG 373
+ + P+ VTY++L++
Sbjct: 579 LKLFYEESVPSDVTYHTLIEN 599
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 201/400 (50%), Gaps = 29/400 (7%)
Query: 8 AVFIFNRLLRTH----PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
A +F L T+ T S+ F ++ S ++ A+S+ H ++ G + +++ +
Sbjct: 116 ASLVFKSLQETYDLCYSTSSV--FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 64 ILINCYCHLGQ-IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+++ + I FA +V ++L+ P+ T+ LI+G C + AL D +
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 123 QGFRLDQVSYSILTLKFS--RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+G + V+Y+ L + R++ + R++ +G + +SY+++INGLC+
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL------KGLEPNLISYNVVINGLCR 287
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
G+ K +L ++ + D V Y T+I CK+ A +++EM+ + P+V T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM- 299
YT+LI+ C G + A E LD+M + + P+ T+ LVDG ++G + A VL M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 300 -------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
+I G C+ G++++A +L++M K + PD ++S ++ G C+ V
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A V M+++G+KP+ +TY+SL+ G C +A D+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 189/423 (44%), Gaps = 68/423 (16%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + +LR TPS+I + ++ S+ K + A+ QM G+ N T + L++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G + A+ VL ++ G+ P +T+ LI G C+ +++ A+ +D+ +G
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D VSYS + F R V AL+ ++V +G + D ++YS LI G C+ +TK A
Sbjct: 449 DVVSYSTVLSGFCRSY----DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT----- 242
L ++ + PD YT +I++ C + + A L++EMV K +LP+V TY+
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 243 ---------------------------------------------ALIYGFCIVGQLKEA 257
+LI GFC+ G + EA
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI----------- 306
++ + M+ KN PD +NI++ G C+ G ++ A + M+ GF +
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 307 ---VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
G++ E ++ ++ +A +LV+ +EG + +VL M K G PN
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Query: 364 VVT 366
++
Sbjct: 745 GIS 747
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 199/388 (51%), Gaps = 21/388 (5%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVK-MKHYPTAISLSHQMESSGIISNMVTSS 63
LR A +F ++L S+ LT L K TAI + + G+ N+ + +
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
I+I+ C LG+I A +L + KGY PD I+++T++ G C ++ + + + + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 124 GFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
G + + Y SI+ L + + A + +++ QG D V Y+ LI+G CK G
Sbjct: 311 GLKPNSYIYGSIIGL-----LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A + ++ + + PDV+ YT II C+ + +A L+ EM K + P+ T+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI G+C G +K+A + + M+ P+ T+ L+DGLCKEG + A +L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
++ G C G ++EA +L+ E ++ D T++ L+D CK G++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
+ +L M+ +G++P +VT+N LM+G CL
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 204/393 (51%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ + ++ + ++ A L ME G ++++ S ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G++ + ++ + +KG +P++ + ++I LC ++ A + +++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y+ L F +R ++ A +F ++ ++ D ++Y+ +I+G C++G A
Sbjct: 350 DTVVYTTLIDGFCKR----GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L ++ K ++PD V +T +I+ CK + DAF +++ M+ PNV TYT LI G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---- 303
C G L A ELL EM + P+ +T+N +V+GLCK G ++ A ++G G
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 304 ----------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+C G++ +A E+L EM+ K + P TF++L++G C G ++ + +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+ +G+ PN T+NSL+ +C+ + + A I
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 187/377 (49%), Gaps = 18/377 (4%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TP +I + ++ + L M+ G+ N +I C + ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
++++++G PDT+ +TTLI G C ++ A +F ++ ++ D ++Y+ + F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ V+ FH+ + +G D V+++ LING CK G K A ++ +
Sbjct: 398 Q---IGDMVEAGKLFHE-MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+VV YTT+ID LCK+ + A L EM + PN+FTY +++ G C G ++EA +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCI 306
+ E ++ D T+ L+D CK G++ A+ +L M+ + GFC+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G L++ +LL+ M+ K I P+A TF+ LV C +K A + M +GV P+ T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 367 YNSLMDGHCLVSEVNKA 383
Y +L+ GHC + +A
Sbjct: 634 YENLVKGHCKARNMKEA 650
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 184/375 (49%), Gaps = 25/375 (6%)
Query: 12 FNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH 71
F+ ++R P + + ++ K A ++M S I +++T + +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 72 LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
+G + A + ++ KG +PD++TFT LI G C ++ A + H+ ++ G + V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 132 YSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
Y+ L + + A + ++ G + + +Y+ ++NGLCK G + A++L+
Sbjct: 459 YTTLIDGLCKE----GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
+ E + D V YTT++D+ CK + A + EM+ K + P + T+ L+ GFC+
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G L++ +LL+ M+ K I P+A TFN LV +CI LK
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ---------------------YCIRNNLK 613
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
AT + +M ++ + PD T+ LV G CK +K A + M +G +V TY+ L+
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 372 DGHCLVSEVNKAKDI 386
G + +A+++
Sbjct: 674 KGFLKRKKFLEAREV 688
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 25/368 (6%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A F + TP ++ + I++ ++ A L H+M G+ + VT +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN YC G + AF V +++ G P+ +T+TTLI GLC + A + ++ G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ + +Y+ + + ++ A++ + A G D V+Y+ L++ CK G+
Sbjct: 487 LQPNIFTYNSIV----NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A ++L+++ GK +QP +V + +++ C ++ D L + M++K I PN T+ +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+ +CI LK AT + +M ++ + PD T+ LV G CK A+N
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK------ARN---------- 646
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
+KEA L EM K T+S+L+ G K K A+ V M ++G+ +
Sbjct: 647 -----MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 365 VTYNSLMD 372
++ D
Sbjct: 702 EIFDFFSD 709
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 49/253 (19%)
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+T A+ + R+ V +V Y +I +C+ + +A +L M K P+V +Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 243 ALIYGFCIVGQLK-----------------------------------EATELLDEMVTK 267
++ G+C G+L EA E EM+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEA 313
I PD + L+DG CK G ++ A M +I GFC +G + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+L EM K ++PD+ TF+ L++G CK G +K A V M++ G PNVVTY +L+DG
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 374 HCLVSEVNKAKDI 386
C +++ A ++
Sbjct: 466 LCKEGDLDSANEL 478
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I + I+ L K + A+ L + E++G+ ++ VT + L++ YC G++ A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS- 140
L ++L KG QP +TF L+ G CL+ ++ + + ++A+G + +++ L ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 141 ---------------RRVISP---------------TPVQRALQFHDDVVAQGFRLDQVS 170
R + P ++ A ++ +GF + +
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
YS+LI G K + A ++ ++ + + D ++ D+ K K
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 199/388 (51%), Gaps = 21/388 (5%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVK-MKHYPTAISLSHQMESSGIISNMVTSS 63
LR A +F ++L S+ LT L K TAI + + G+ N+ + +
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
I+I+ C LG+I A +L + KGY PD I+++T++ G C ++ + + + + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 124 GFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
G + + Y SI+ L + + A + +++ QG D V Y+ LI+G CK G
Sbjct: 311 GLKPNSYIYGSIIGL-----LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A + ++ + + PDV+ YT II C+ + +A L+ EM K + P+ T+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI G+C G +K+A + + M+ P+ T+ L+DGLCKEG + A +L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
++ G C G ++EA +L+ E ++ D T++ L+D CK G++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
+ +L M+ +G++P +VT+N LM+G CL
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 204/393 (51%), Gaps = 18/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ + ++ + ++ A L ME G ++++ S ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G++ + ++ + +KG +P++ + ++I LC ++ A + +++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y+ L F +R ++ A +F ++ ++ D ++Y+ +I+G C++G A
Sbjct: 350 DTVVYTTLIDGFCKR----GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L ++ K ++PD V +T +I+ CK + DAF +++ M+ PNV TYT LI G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---- 303
C G L A ELL EM + P+ +T+N +V+GLCK G ++ A ++G G
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 304 ----------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+C G++ +A E+L EM+ K + P TF++L++G C G ++ + +L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+ +G+ PN T+NSL+ +C+ + + A I
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 187/377 (49%), Gaps = 18/377 (4%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TP +I + ++ + L M+ G+ N +I C + ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
++++++G PDT+ +TTLI G C ++ A +F ++ ++ D ++Y+ + F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ V+ FH+ + +G D V+++ LING CK G K A ++ +
Sbjct: 398 Q---IGDMVEAGKLFHE-MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+VV YTT+ID LCK+ + A L EM + PN+FTY +++ G C G ++EA +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCI 306
+ E ++ D T+ L+D CK G++ A+ +L M+ + GFC+
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G L++ +LL+ M+ K I P+A TF+ LV C +K A + M +GV P+ T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 367 YNSLMDGHCLVSEVNKA 383
Y +L+ GHC + +A
Sbjct: 634 YENLVKGHCKARNMKEA 650
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 184/375 (49%), Gaps = 25/375 (6%)
Query: 12 FNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH 71
F+ ++R P + + ++ K A ++M S I +++T + +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 72 LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
+G + A + ++ KG +PD++TFT LI G C ++ A + H+ ++ G + V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 132 YSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
Y+ L + + A + ++ G + + +Y+ ++NGLCK G + A++L+
Sbjct: 459 YTTLIDGLCKE----GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
+ E + D V YTT++D+ CK + A + EM+ K + P + T+ L+ GFC+
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G L++ +LL+ M+ K I P+A TFN LV +CI LK
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ---------------------YCIRNNLK 613
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
AT + +M ++ + PD T+ LV G CK +K A + M +G +V TY+ L+
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 372 DGHCLVSEVNKAKDI 386
G + +A+++
Sbjct: 674 KGFLKRKKFLEAREV 688
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 25/368 (6%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A F + TP ++ + I++ ++ A L H+M G+ + VT +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN YC G + AF V +++ G P+ +T+TTLI GLC + A + ++ G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ + +Y+ + + ++ A++ + A G D V+Y+ L++ CK G+
Sbjct: 487 LQPNIFTYNSIV----NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A ++L+++ GK +QP +V + +++ C ++ D L + M++K I PN T+ +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+ +CI LK AT + +M ++ + PD T+ LV G CK A+N
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK------ARN---------- 646
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
+KEA L EM K T+S+L+ G K K A+ V M ++G+ +
Sbjct: 647 -----MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 365 VTYNSLMD 372
++ D
Sbjct: 702 EIFDFFSD 709
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 49/253 (19%)
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+T A+ + R+ V +V Y +I +C+ + +A +L M K P+V +Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 243 ALIYGFCIVGQLK-----------------------------------EATELLDEMVTK 267
++ G+C G+L EA E EM+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEA 313
I PD + L+DG CK G ++ A M +I GFC +G + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+L EM K ++PD+ TF+ L++G CK G +K A V M++ G PNVVTY +L+DG
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 374 HCLVSEVNKAKDI 386
C +++ A ++
Sbjct: 466 LCKEGDLDSANEL 478
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I + I+ L K + A+ L + E++G+ ++ VT + L++ YC G++ A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS- 140
L ++L KG QP +TF L+ G CL+ ++ + + ++A+G + +++ L ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 141 ---------------RRVISP---------------TPVQRALQFHDDVVAQGFRLDQVS 170
R + P ++ A ++ +GF + +
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
YS+LI G K + A ++ ++ + + D ++ D+ K K
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 211/393 (53%), Gaps = 19/393 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ P++ + ++ SL + A++L +ME +GI N+ T ++LI+
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A +L ++L+KG P+ IT+ LI G C ++ A+ + + ++
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +Y+ L + + + V +A+ + ++ + D V+Y+ LI+G C+ G A
Sbjct: 427 NTRTYNELIKGYCK-----SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+LL + + + PD YT++IDSLCK K V +A +L+ + K + PNV YTALI G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
+C G++ EA +L++M++KN P++ TFN L+ GLC +GK+K A + M
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I+ G A +M++ PDA+T++ + C+EG++ A++++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M + GV P++ TY+SL+ G+ + + N A D+
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 195/373 (52%), Gaps = 23/373 (6%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +L SL + + +M + N+ T + ++N YC LG + A ++KI+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS--ILTLKFSRRVI 144
+ G PD T+T+LI G C + A + +++ +G R ++V+Y+ I L +RR+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI- 304
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
+ ++ DD R +Y++LI LC + AL L++++E ++P++
Sbjct: 305 -DEAMDLFVKMKDDECFPTVR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
YT +IDSLC A L +M+ K ++PNV TY ALI G+C G +++A ++++ M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQL 310
++ + P+ T+N L+ G CK V A VL M +I G C G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
A LL M + + PD +T++ ++D LCK +V+ A ++ + ++GV PNVV Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 371 MDGHCLVSEVNKA 383
+DG+C +V++A
Sbjct: 539 IDGYCKAGKVDEA 551
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 194/391 (49%), Gaps = 27/391 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
++ +L P+I + K++ K+ + A ++ +G+ + T + LI YC
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL----QFHDDVVAQGFR 126
+ AF V ++ KG + + + +T LI GLC+ ++ A+ + DD R
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+Y++L + + AL ++ G + + +Y++LI+ LC + +
Sbjct: 325 ----TYTVLI----KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A +LL ++ K + P+V+ Y +I+ CK ++ DA ++ M S+++ PN TY LI
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G+C + +A +L++M+ + + PD T+N L+DG C+ G A +L +M
Sbjct: 437 GYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI C +++EA +L D + K ++P+ ++ L+DG CK GKV A +L
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M+ + PN +T+N+L+ G C ++ +A
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 173/338 (51%), Gaps = 19/338 (5%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ L+N G + V ++L+ P+ T+ ++ G C V+ A Q+ +V
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
G D +Y+ L + + +R + A + +++ +G R ++V+Y+ LI+GLC
Sbjct: 247 AGLDPDFFTYTSLIMGYCQR----KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A+ L K++ P V YT +I SLC + ++A NL EM I PN+ TYT
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI C + ++A ELL +M+ K + P+ T+N L++G CK G ++ A +V+ +M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
+I G+C + +A +L++M+ + + PD T++ L+DG C+ G A
Sbjct: 423 KLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+L +M +G+ P+ TY S++D C V +A D+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 183/377 (48%), Gaps = 37/377 (9%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A+ + ++M ++ ++VT + LI+ C G A+ +L+ + +G PD T+T++I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
LC + +V+ A D + +G + V Y+ L + + V A + ++++
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK----AGKVDEAHLMLEKMLSK 561
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
+ ++++ LI+GLC G+ K A L K+ +QP V T +I L KD A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
++ + +M+S P+ TYT I +C G+L +A +++ +M + PD +T++ L+ G
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 283 LCKEGKVKGAKNVLGVM---------------------MIYG--------FCIVGQLKE- 312
G+ A +VL M M YG C + + E
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 313 --ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK-QGVKPNVVTYNS 369
ELL++MV ++ P+A ++ L+ G+C+ G ++ A+ V M + +G+ P+ + +N+
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 370 LMDGHCLVSEVNKAKDI 386
L+ C + + N+A +
Sbjct: 802 LLSCCCKLKKHNEAAKV 818
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 49/230 (21%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y T+++SL + LV + +Y EM+ ++ PN++TY ++ G+C +G ++EA + + ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK 311
+DPD +T+ L+ G C+ + A V M +I+G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 312 EATE-----------------------------------LLDEMVTKNIDPDAYTFSILV 336
EA + L+ EM I P+ +T+++L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
D LC + K + A+ +LG M+++G+ PNV+TYN+L++G+C + A D+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 175/416 (42%), Gaps = 64/416 (15%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + ++ SL K K A L +E G+ N+V + LI+ YC G++ A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLK--- 138
L K+L K P+++TF LI GLC + +++ A + +V G + + +IL +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 139 -------FSR--RVISPTPVQRALQF---------------HDDVVAQ----GFRLDQVS 170
+SR +++S A + +D++A+ G D +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL------------ 218
YS LI G +GQT A +L+++ +P + ++I L + K
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 219 ------VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM-VTKNIDP 271
L +MV + PN +Y LI G C VG L+ A ++ D M + I P
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF------CIV--------GQLKEATELL 317
FN L+ CK K A V+ M+ G C V G+ + T +
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
++ D + I++DG+ K+G V+ + VM K G K + TY+ L++G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 19/312 (6%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L+ A + ++++ P++ ++ L+K + A S QM SSG + T +
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
I YC G++ A ++AK+ + G PD T+++LIKG Q A + G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 125 FRLDQVSY-----SILTLKFSRRVISPTPV---------QRALQFHDDVVAQGFRLDQVS 170
Q ++ +L +K+ ++ S + ++ + +V + S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 171 YSILINGLCKMGQTKPALQL---LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
Y LI G+C++G + A ++ +++ EG + P +++ ++ CK K +A +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEG--ISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
+M+ LP + + LI G G+ + T + ++ D + I++DG+ K+G
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Query: 288 KVKGAKNVLGVM 299
V+ + VM
Sbjct: 881 LVEAFYELFNVM 892
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 208/398 (52%), Gaps = 21/398 (5%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L+ AV +F + + + + + ++ LV+ +++ A S +M + N V+ S
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+ CY + + FAF VLA +LK+G+ + L+KGLC N + +A+ ++
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
D SY+ + R +++AL+ +++ G V++ ILI+ CK G+
Sbjct: 173 LMPDVFSYNTVI----RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A+ L++++ ++ D+V+YT++I C + L+ E++ + P TY L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----- 299
I GFC +GQLKEA+E+ + M+ + + P+ YT+ L+DGLC GK K A +L +M
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 300 ---------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
+I C G + +A E+++ M + PD T++IL+ GLC +G + A
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 351 VLGVMMKQG--VKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+L +M+K P+V++YN+L+ G C + +++A DI
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 203/430 (47%), Gaps = 55/430 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + + R P + + ++ + K A+ L+++M+ SG ++VT ILI+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G++ A L ++ G + D + +T+LI+G C ++ R D+V+ +G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++Y+ L F + ++ A + + ++ +G R + +Y+ LI+GLC +G+TK A
Sbjct: 281 CAITYNTLIRGFCK----LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LQLL + K +P+ V Y II+ LCKD LV DA + M +R P+ TY L+ G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 248 FCIVGQLKEATELLDEMVTKN--IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
C G L EA++LL M+ + DPD ++N L+ GLCKE ++ A ++ ++
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 300 -------------------------------------------MIYGFCIVGQLKEATEL 316
MI GFC G L A L
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 317 LDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
L +M + P + ++ L+ LCKEG + A + M + P+VV++N ++DG
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 377 VSEVNKAKDI 386
++ A+ +
Sbjct: 577 AGDIKSAESL 586
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 30/380 (7%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L+ A IF ++ P++ + ++ L + A+ L + M N VT +I
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA-----LQFHDD 119
+IN C G + A ++ + K+ +PD IT+ L+ GLC + A L D
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC 179
D +SY+ L + + +AL +D +V + D+V+ +IL+N
Sbjct: 418 SYTDP---DVISYNALI----HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
K G A++L ++I + + YT +ID CK ++ A L +M + P+VF
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
Y L+ C G L +A L +EM N PD +FNI++DG K G +K A+++L M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 300 --------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
+I F +G L EA D+MV +PDA+ + D + K
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKYCIS 646
Query: 346 KGAKNVLGVMMKQGVKPNVV 365
+G + L ++K+ V ++V
Sbjct: 647 QGETDKLTELVKKLVDKDIV 666
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 159/349 (45%), Gaps = 20/349 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + N ++ P+ + + I+ L K A+ + M+ + +T +IL+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 68 CYCHLGQIPFAFSVLAKILKKGY--QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
C G + A +L +LK PD I++ LI GLC ++ +AL +D +V +
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
D+V+ +IL + V +A++ + + +Y+ +I+G CK G
Sbjct: 456 AGDRVTTNILL----NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
A LL K+ +QP V Y ++ SLCK+ + A+ L+ EM P+V ++ +I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF- 304
G G +K A LL M + PD +T++ L++ K G + A + M+ GF
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 305 ------------CIV-GQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
CI G+ + TEL+ ++V K+I D ++D +C
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 207/413 (50%), Gaps = 56/413 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P II ++ ++ A + +E SG + +++T +++I+ YC G+I A SV
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++ PD +T+ T+++ LC + ++++A++ D ++ + D ++Y+IL R
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ V A++ D++ +G D V+Y++L+NG+CK G+ A++ L + QP
Sbjct: 252 ----DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK---------RIL----------------- 235
+V+ + I+ S+C DA L ++M+ K IL
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 236 ---------PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
PN +Y L++GFC ++ A E L+ MV++ PD T+N ++ LCK+
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 287 GKVKGAKNVLG---------VMMIY-----GFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
GKV+ A +L V++ Y G G+ +A +LLDEM K++ PD T+
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
S LV GL +EGKV A + G++PN VT+NS+M G C + ++A D
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 184/373 (49%), Gaps = 21/373 (5%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAK 84
+E L +V+ M G + +++ + LI +C LG+ A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
+ G PD IT+ +I G C ++ AL D + D V+Y+ + R +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTIL----RSLC 215
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
+++A++ D ++ + D ++Y+ILI C+ A++LL ++ + PDVV
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
Y +++ +CK+ + +A ++M S PNV T+ ++ C G+ +A +LL +M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQL 310
+ K P TFNIL++ LC++G + A ++L M +++GFC ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
A E L+ MV++ PD T++ ++ LCK+GKV+ A +L + +G P ++TYN++
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 371 MDGHCLVSEVNKA 383
+DG + KA
Sbjct: 456 IDGLAKAGKTGKA 468
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 187/372 (50%), Gaps = 25/372 (6%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S L+ A+ + +R+L+ P +I + ++ + + A+ L +M G ++VT
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
++L+N C G++ A L + G QP+ IT +++ +C + A + D++
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+GF V+++IL R+ + + RA+ + + G + + +SY+ L++G CK
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGL----LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ A++ L ++ + PD+V Y T++ +LCKD V DA + +++ SK P + TY
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
+I G G+ +A +LLDEM K++ PD T++ LV GL +EGKV
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV------------ 500
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
EA + E I P+A TF+ ++ GLCK + A + L M+ +G K
Sbjct: 501 ---------DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 362 PNVVTYNSLMDG 373
PN +Y L++G
Sbjct: 552 PNETSYTILIEG 563
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 164/328 (50%), Gaps = 21/328 (6%)
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
G++ F L ++ G PD I TTLI+G C + ++A + + + G D ++Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+++ + + + AL D + D V+Y+ ++ LC G+ K A+++L
Sbjct: 176 NVMISGYCK----AGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
++ + PDV+ YT +I++ C+D V A L EM + P+V TY L+ G C G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF-------- 304
+L EA + L++M + P+ T NI++ +C G+ A+ +L M+ GF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 305 ------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
C G L A ++L++M P++ +++ L+ G CKE K+ A L M+ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G P++VTYN+++ C +V A +I
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 18/319 (5%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TP ++ + ++ + K AI + M SSG N++T +I++ C G+ A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+LA +L+KG+ P +TF LI LC + RA+ + + G + + +SY+ L F
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ + RA+++ + +V++G D V+Y+ ++ LCK G+ + A+++L ++ K
Sbjct: 391 KE----KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P ++ Y T+ID L K A L EM +K + P+ TY++L+ G G++ EA +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
E I P+A TFN ++ GLCK + A + L M +I G
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 307 VGQLKEATELLDEMVTKNI 325
G KEA ELL+E+ K +
Sbjct: 567 EGMAKEALELLNELCNKGL 585
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 55/350 (15%)
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
S +K+ G F TL G H V F L+ V +
Sbjct: 58 SAASKVESSGLNGRAQKFETLSSGY-----SNSNGNGHYSSVNSSFALEDVESN----NH 108
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK-- 197
R+++ ++ +F +++V G D + + LI G C++G+T+ A ++L +EG
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 198 ------------------------------LVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
V PDVV Y TI+ SLC + A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
M+ + P+V TYT LI C + A +LLDEM + PD T+N+LV+G+CKEG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 288 KVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
++ A L M ++ C G+ +A +LL +M+ K P TF+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
IL++ LC++G + A ++L M + G +PN ++YN L+ G C ++++A
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ N + + P++I IL S+ + A L M G ++VT +ILIN
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + A +L K+ + G QP+++++ L+ G C ++ RA+++ + +V++G
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + + V+ A++ + + ++G ++Y+ +I+GL K G+T A
Sbjct: 413 DIVTYNTMLTALCK----DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LL ++ K ++PD + Y++++ L ++ V +A + E I PN T+ +++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C Q A + L M+ + P+ ++ IL++GL EG K A +L + C
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL-----CNK 583
Query: 308 GQLKEAT 314
G +K+++
Sbjct: 584 GLMKKSS 590
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 29/383 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + +L LV + A ++ + M S I + T +++ +C + +I A S+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL---K 138
L + K G P+++ + TLI L +V ALQ +++ G D +++ + L K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
F R + A + + ++ +GF D ++Y L+NGLCK+G+ A L +I
Sbjct: 300 FDR-------INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--- 349
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV-SKRILPNVFTYTALIYGFCIVGQLKEA 257
+P++V++ T+I + DA + S+MV S I+P+V TY +LIYG+ G + A
Sbjct: 350 -KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYG 303
E+L +M K P+ Y++ ILVDG CK GK+ A NVL M +I
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
FC ++ EA E+ EM K PD YTF+ L+ GLC+ ++K A +L M+ +GV N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 364 VVTYNSLMDGHCLVSEVNKAKDI 386
VTYN+L++ E+ +A+ +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKL 551
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 196/420 (46%), Gaps = 42/420 (10%)
Query: 6 RLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
++A +F +L P++ FG ++ + + +A+SL M G + N V L
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
I+ ++ A +L ++ G PD TF +I GLC ++ A + + ++ +GF
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 126 RLDQVSYSILT---LKFSR---------RVISPTPVQRALQFH----------------D 157
D ++Y L K R R+ P V H D
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
V + G D +Y+ LI G K G AL++L + K +P+V YT ++D CK
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+ +A+N+ +EM + + PN + LI FC ++ EA E+ EM K PD YTFN
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 278 ILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTK 323
L+ GLC+ ++K A +L M +I F G++KEA +L++EMV +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
D T++ L+ GLC+ G+V A+++ M++ G P+ ++ N L++G C V +A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 193/383 (50%), Gaps = 23/383 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + NR+L P I +G ++ L K+ A L +++ I V + LI+
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIH 361
Query: 68 CYCHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ G++ A +VL+ ++ G PD T+ +LI G V AL+ D+ +G +
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ SY+IL F + + A +++ A G + + V ++ LI+ CK +
Sbjct: 422 PNVYSYTILVDGFCKL----GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A+++ R++ K +PDV + ++I LC+ + A L +M+S+ ++ N TY LI
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM------ 300
F G++KEA +L++EMV + D T+N L+ GLC+ G+V A+++ M+
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 301 --------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
I G C G ++EA E EMV + PD TF+ L++GLC+ G+++ +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 353 GVMMKQGVKPNVVTYNSLMDGHC 375
+ +G+ P+ VT+N+LM C
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLC 680
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 189/374 (50%), Gaps = 23/374 (6%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P F ++ L K A + ++M G + +T L+N C +G++ A +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV-AQGFRLDQVSYSILTLKFS 140
+I K P+ + F TLI G + ++ A D+V + G D +Y+ L +
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ + V AL+ D+ +G + + SY+IL++G CK+G+ A +L ++ ++
Sbjct: 401 KEGL----VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+ V + +I + CK+ + +A ++ EM K P+V+T+ +LI G C V ++K A L
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
L +M+++ + + T+N L++ + G++K A+ ++ M +I G C
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G++ +A L ++M+ P + +IL++GLC+ G V+ A M+ +G P++VT
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 367 YNSLMDGHCLVSEV 380
+NSL++G C +
Sbjct: 637 FNSLINGLCRAGRI 650
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 166/333 (49%), Gaps = 25/333 (7%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + + + P++ + ++ K+ A ++ ++M + G+ N V + LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ +C +IP A + ++ +KG +PD TF +LI GLC +++ AL D++++G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ V+Y+ L F RR ++ A + +++V QG LD+++Y+ LI GLC+ G+
Sbjct: 527 ANTVTYNTLINAFLRR----GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A L K+ P + +I+ LC+ +V +A EMV + P++ T+ +LI
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G C G++++ + ++ + I PD TFN L+ LCK G +Y C+
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG------------FVYDACL 690
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
LLDE + P+ T+SIL+ +
Sbjct: 691 ---------LLDEGIEDGFVPNHRTWSILLQSI 714
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 180/367 (49%), Gaps = 19/367 (5%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAIS-LSHQMESSGIISNMVTSSILINCYCHLGQIPFA 78
P P I+ F ++ V A + LS + S GI+ ++ T + LI Y G + A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 79 FSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLK 138
VL + KG +P+ ++T L+ G C ++ A +++ A G + + V ++ L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
F + P A++ ++ +G + D +++ LI+GLC++ + K AL LLR + +
Sbjct: 469 FCKEHRIP----EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
V + V Y T+I++ + + +A L +EMV + + TY +LI G C G++ +A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGF 304
L ++M+ P + NIL++GLC+ G V+ A M +I G
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C G++++ + ++ + I PD TF+ L+ LCK G V A +L ++ G PN
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 365 VTYNSLM 371
T++ L+
Sbjct: 705 RTWSILL 711
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
GQT + +R + +P Y +++ L A N++ +M+S++I P +FT+
Sbjct: 163 GQTTRLMLEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
++ FC V ++ A LL +M P++ + L+ L K +V
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV------------ 268
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
EA +LL+EM PDA TF+ ++ GLCK ++ A ++ M+ +G
Sbjct: 269 ---------NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 362 PNVVTYNSLMDGHCLVSEVNKAKDI 386
P+ +TY LM+G C + V+ AKD+
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDL 344
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%), Gaps = 26/365 (7%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
F+ LLR + +P +++ L K + A+ L Q + G + + TS+ L++
Sbjct: 457 FVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G++ AF + +IL +G D +++ TLI G C ++ A F D++V +G + D
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
+YSIL + + V+ A+QF DD G D +YS++I+G CK +T+ +
Sbjct: 576 YTYSILICG----LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
++ K VQP+ V+Y +I + C+ ++ A L +M K I PN TYT+LI G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQ 309
I+ +++EA L +EM + ++P+ + + L+DG K +GQ
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK---------------------LGQ 730
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
+ + LL EM +KN+ P+ T+++++ G ++G V A +L M ++G+ P+ +TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 370 LMDGH 374
+ G+
Sbjct: 791 FIYGY 795
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 80/447 (17%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F+++ P+++ F ++ L Y A +M G+ ++T SIL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTI-------------------------------- 95
+I A+ VL ++ KKG+ P+ I
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 96 ---TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFSR---------- 141
T+ TLIKG C N Q A + ++++ GF ++Q S+ S++ L S
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 142 -----RVISPT---------------PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
R +SP +AL+ + +GF +D + + L++GLC+
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ A ++ ++I G+ D V Y T+I C K + +AF EMV + + P+ +TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM- 300
+ LI G + +++EA + D+ + PD YT+++++DG CK + + + MM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 301 -------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
I +C G+L A EL ++M K I P++ T++ L+ G+ +V+
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGH 374
AK + M +G++PNV Y +L+DG+
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGY 725
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 185/380 (48%), Gaps = 18/380 (4%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P + F + + K A+ L +ME +G+ N+VT + +I+ G+ AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
K++++G +P IT++ L+KGL ++ A ++ +GF + + Y+ L F
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF- 375
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
I + +A++ D +V++G L +Y+ LI G CK GQ A +LL+++
Sbjct: 376 ---IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+ +T++I LC + A EM+ + + P T LI G C G+ +A EL
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----KNVLG---VM-------MIYGFCI 306
+ + K D T N L+ GLC+ GK+ A K +LG VM +I G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+L EA LDEMV + + PD YT+SIL+ GL KV+ A + G+ P+V T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
Y+ ++DG C + ++
Sbjct: 613 YSVMIDGCCKAERTEEGQEF 632
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 25/321 (7%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ LI+ C G+ A + + L KG+ DT T L+ GLC ++ A + +++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G +D+VSY+ L + A F D++V +G + D +YSILI GL M
Sbjct: 534 RGCVMDRVSYNTLI----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ + A+Q + + PDV Y+ +ID CK + + + EM+SK + PN Y
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
LI +C G+L A EL ++M K I P++ T+ L+ G+
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS------------------ 691
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
I+ +++EA L +EM + ++P+ + ++ L+DG K G++ + +L M + V P
Sbjct: 692 ---IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 363 NVVTYNSLMDGHCLVSEVNKA 383
N +TY ++ G+ V +A
Sbjct: 749 NKITYTVMIGGYARDGNVTEA 769
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 22/339 (6%)
Query: 62 SSILINCYC---HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD 118
S +LI YC A V + KG P T L+ L + Q+ + D
Sbjct: 191 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 119 DVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
VV +G D ++ F + V+ A++ + G + V+++ +I+GL
Sbjct: 251 -VVCKGVSPDVYLFTTAINAFCK----GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
G+ A K+ + ++P ++ Y+ ++ L + K + DA+ + EM K PNV
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
Y LI F G L +A E+ D MV+K + + T+N L+ G CK G+ A+ +L
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 299 MMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
M+ GF C A + EM+ +N+ P + L+ GLCK GK
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
A + + +G + T N+L+ G C ++++A
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+L L + A + ++ G + + V+ + LI+ C ++ AF L +++K+G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL---TLKFSR----- 141
+PD T++ LI GL +V+ A+QF DD G D +YS++ K R
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 142 --------RVISPTPV---------------QRALQFHDDVVAQGFRLDQVSYSILINGL 178
+ + P V AL+ +D+ +G + +Y+ LI G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
+ + + A L ++ + ++P+V YT +ID K + L EM SK + PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
TYT +I G+ G + EA+ LL+EM K I PD+ T+ + G K+G V
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 4/256 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + +++ P + ++ L M AI + +G++ ++ T S++I+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + +++ K QP+T+ + LI+ C + ++ AL+ +D+ +G
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +Y+ L S +IS V+ A +++ +G + Y+ LI+G K+GQ
Sbjct: 679 NSATYTSLIKGMS--IISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LLR++ K V P+ + YT +I +D VT+A L +EM K I+P+ TY IYG
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 248 FCIVGQLKEATELLDE 263
+ G + EA + DE
Sbjct: 795 YLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%), Gaps = 26/365 (7%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
F+ LLR + +P +++ L K + A+ L Q + G + + TS+ L++
Sbjct: 457 FVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G++ AF + +IL +G D +++ TLI G C ++ A F D++V +G + D
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
+YSIL + + V+ A+QF DD G D +YS++I+G CK +T+ +
Sbjct: 576 YTYSILICG----LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
++ K VQP+ V+Y +I + C+ ++ A L +M K I PN TYT+LI G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQ 309
I+ +++EA L +EM + ++P+ + + L+DG K +GQ
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK---------------------LGQ 730
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
+ + LL EM +KN+ P+ T+++++ G ++G V A +L M ++G+ P+ +TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 370 LMDGH 374
+ G+
Sbjct: 791 FIYGY 795
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 203/447 (45%), Gaps = 80/447 (17%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F+++ P+++ F ++ L Y A +M G+ ++T SIL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTI-------------------------------- 95
+I A+ VL ++ KKG+ P+ I
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 96 ---TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFSR---------- 141
T+ TLIKG C N Q A + ++++ GF ++Q S+ S++ L S
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 142 -----RVISPT---------------PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
R +SP +AL+ + +GF +D + + L++GLC+
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ A ++ ++I G+ D V Y T+I C K + +AF EMV + + P+ +TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM- 300
+ LI G + +++EA + D+ + PD YT+++++DG CK + + + MM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 301 -------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
I +C G+L A EL ++M K I P++ T++ L+ G+ +V+
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGH 374
AK + M +G++PNV Y +L+DG+
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGY 725
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 185/380 (48%), Gaps = 18/380 (4%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P + F + + K A+ L +ME +G+ N+VT + +I+ G+ AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
K++++G +P IT++ L+KGL ++ A ++ +GF + + Y+ L F
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF- 375
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
I + +A++ D +V++G L +Y+ LI G CK GQ A +LL+++
Sbjct: 376 ---IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+ +T++I LC + A EM+ + + P T LI G C G+ +A EL
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----KNVLG---VM-------MIYGFCI 306
+ + K D T N L+ GLC+ GK+ A K +LG VM +I G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+L EA LDEMV + + PD YT+SIL+ GL KV+ A + G+ P+V T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
Y+ ++DG C + ++
Sbjct: 613 YSVMIDGCCKAERTEEGQEF 632
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 25/321 (7%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ LI+ C G+ A + + L KG+ DT T L+ GLC ++ A + +++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G +D+VSY+ L + A F D++V +G + D +YSILI GL M
Sbjct: 534 RGCVMDRVSYNTLI----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ + A+Q + + PDV Y+ +ID CK + + + EM+SK + PN Y
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
LI +C G+L A EL ++M K I P++ T+ L+ G+
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS------------------ 691
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
I+ +++EA L +EM + ++P+ + ++ L+DG K G++ + +L M + V P
Sbjct: 692 ---IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 363 NVVTYNSLMDGHCLVSEVNKA 383
N +TY ++ G+ V +A
Sbjct: 749 NKITYTVMIGGYARDGNVTEA 769
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 22/339 (6%)
Query: 62 SSILINCYC---HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD 118
S +LI YC A V + KG P T L+ L + Q+ + D
Sbjct: 191 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 119 DVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
VV +G D ++ F + V+ A++ + G + V+++ +I+GL
Sbjct: 251 -VVCKGVSPDVYLFTTAINAFCK----GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
G+ A K+ + ++P ++ Y+ ++ L + K + DA+ + EM K PNV
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
Y LI F G L +A E+ D MV+K + + T+N L+ G CK G+ A+ +L
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 299 MMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
M+ GF C A + EM+ +N+ P + L+ GLCK GK
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
A + + +G + T N+L+ G C ++++A
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+L L + A + ++ G + + V+ + LI+ C ++ AF L +++K+G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL---TLKFSR----- 141
+PD T++ LI GL +V+ A+QF DD G D +YS++ K R
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 142 --------RVISPTPV---------------QRALQFHDDVVAQGFRLDQVSYSILINGL 178
+ + P V AL+ +D+ +G + +Y+ LI G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
+ + + A L ++ + ++P+V YT +ID K + L EM SK + PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
TYT +I G+ G + EA+ LL+EM K I PD+ T+ + G K+G V
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 4/256 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + +++ P + ++ L M AI + +G++ ++ T S++I+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + +++ K QP+T+ + LI+ C + ++ AL+ +D+ +G
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +Y+ L S +IS V+ A +++ +G + Y+ LI+G K+GQ
Sbjct: 679 NSATYTSLIKGMS--IISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LLR++ K V P+ + YT +I +D VT+A L +EM K I+P+ TY IYG
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 248 FCIVGQLKEATELLDE 263
+ G + EA + DE
Sbjct: 795 YLKQGGVLEAFKGSDE 810
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 200/388 (51%), Gaps = 25/388 (6%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
F+ A+ +F + P + ++ L K + A+ L +M+S G + V +
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+LI+ C G + ++ + KG P+ +T+ TLI GLCL ++ +A+ + +V+
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 124 GFRLDQVSYSILT--LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ V+Y L L RR A++ + +G+ L+Q YS+LI+GL K
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATD------AVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ + A+ L RK+ K +P++V+Y+ ++D LC++ +A + + M++ LPN +TY
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM- 300
++L+ GF G +EA ++ EM + + +++L+DGLC G+VK A V M+
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 301 -------------IYGFCIVGQLKEATELLDEMVTKN---IDPDAYTFSILVDGLCKEGK 344
I G C +G + A +L EM+ + PD T++IL+DGLC +
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+ A ++L M+ +G P+V+T N+ ++
Sbjct: 556 ISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 23/395 (5%)
Query: 8 AVFIFNRLLRTHPTP-SIIEFGKILTSLVKMKHYPTAISLSHQMESSG----IISNMVTS 62
AV +F+R++ S+ F +L ++ Y + + +S I N ++
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+++I C L + A V + ++ PD T+ TL+ GLC ++ A+ D++ +
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G V Y++L ++ + R + D++ +G ++V+Y+ LI+GLC G
Sbjct: 251 EGCSPSPVIYNVLIDGLCKK----GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A+ LL ++ P+ V Y T+I+ L K + TDA L S M + N Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI G G+ +EA L +M K P+ +++LVDGLC+EGK AK +L M
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
++ GF G +EA ++ EM + + +S+L+DGLC G+VK A
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
V M+ G+KP+ V Y+S++ G C + ++ A
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 169/344 (49%), Gaps = 7/344 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + R++ + P+ + +G ++ LVK + A+ L ME G N S+LI+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
G+ A S+ K+ +KG +P+ + ++ L+ GLC + A + + ++A G
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +YS L F + + + A+Q ++ G ++ YS+LI+GLC +G+ K A
Sbjct: 431 NAYTYSSLMKGFFKTGL----CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK---RILPNVFTYTAL 244
+ + K+ ++PD V Y++II LC + A LY EM+ + + P+V TY L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+ G C+ + A +LL+ M+ + DPD T N ++ L ++ ++
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRL 606
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
++ A +++ M+ K + P T++++V +CK K+ A
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 18/262 (6%)
Query: 143 VISPTPVQRALQFHDDVVAQGFRLD----QVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
+I+ R L+F+D VV ++ +S++++I LCK+ A+++ R + +
Sbjct: 158 IINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK 217
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
PD Y T++D LCK++ + +A L EM S+ P+ Y LI G C G L T
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVT 277
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------MIYGFCIVGQ 309
+L+D M K P+ T+N L+ GLC +GK+ A ++L M + YG I G
Sbjct: 278 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL 337
Query: 310 LKE-----ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
+K+ A LL M + + + +S+L+ GL KEGK + A ++ M ++G KPN+
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
V Y+ L+DG C + N+AK+I
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEI 419
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 181/377 (48%), Gaps = 20/377 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+ + ++++ A L + M G + T + +IN C G+ A V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
A++L+ G PD+ T+ +L+ C V + D+ ++ D V +S + F+R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +AL + + V G D V Y+ILI G C+ G A+ L ++ +
Sbjct: 388 ----SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DVV Y TI+ LCK K++ +A L++EM + + P+ +T T LI G C +G L+ A EL
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
+M K I D T+N L+DG K G + AK + M ++ C
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G L EA + DEM++KNI P + ++ G C+ G ++ L M+ +G P+ ++Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 368 NSLMDGHCLVSEVNKAK 384
N+L+ G V E N +K
Sbjct: 624 NTLIYG--FVREENMSK 638
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 195/387 (50%), Gaps = 22/387 (5%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F +LR+ +P + +L K + M S ++ ++V S +++ +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + + G PD + +T LI+G C + A+ ++++ QG +D V
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ + +R + + A + +++ + D + +ILI+G CK+G + A++L
Sbjct: 447 TYNTILHGLCKRKM----LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+K++ K ++ DVV Y T++D K + A ++++MVSK ILP +Y+ L+ C
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------- 299
G L EA + DEM++KNI P N ++ G C+ G ++ L M
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKN--IDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
+IYGF + +A L+ +M + + PD +T++ ++ G C++ ++K A+ VL
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 355 MMKQGVKPNVVTYNSLMDGHCLVSEVN 381
M+++GV P+ TY +++G VS+ N
Sbjct: 683 MIERGVNPDRSTYTCMING--FVSQDN 707
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 187/380 (49%), Gaps = 20/380 (5%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P + + ++ L K Y A + +M SG+ + T L+ C G +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
V + + + PD + F++++ + + +AL + + V G D V Y+IL +
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R+ + + A+ ++++ QG +D V+Y+ +++GLCK A +L ++ + +
Sbjct: 422 RKGM----ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD T +ID CK + +A L+ +M KRI +V TY L+ GF VG + A E+
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
+MV+K I P +++ILV+ LC +G + A V M MI G+C
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ--GVKPNV 364
G + L++M+++ PD +++ L+ G +E + A ++ M ++ G+ P+V
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 365 VTYNSLMDGHCLVSEVNKAK 384
TYNS++ G C +++ +A+
Sbjct: 658 FTYNSILHGFCRQNQMKEAE 677
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 185/365 (50%), Gaps = 21/365 (5%)
Query: 36 KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTI 95
K++ A +L + S G ++ + LI +G + A+ V +I + G +
Sbjct: 180 KLREAHEAFTL---LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 96 TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF 155
T ++ LC + ++++ F V +G D V+Y+ L +S + + ++ A +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL----MEEAFEL 292
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
+ + +GF +Y+ +INGLCK G+ + A ++ ++ + PD Y +++ CK
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
V + ++S+M S+ ++P++ +++++ F G L +A + + + PD
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMV 321
+ IL+ G C++G + A N+ M+ ++G C L EA +L +EM
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ + PD+YT +IL+DG CK G ++ A + M ++ ++ +VVTYN+L+DG V +++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 382 KAKDI 386
AK+I
Sbjct: 533 TAKEI 537
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 177/390 (45%), Gaps = 62/390 (15%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + P ++ F +++ + + A+ + ++ +G+I + V +ILI YC
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC-----------LNAQVQRAL----- 114
G I A ++ ++L++G D +T+ T++ GLC N +RAL
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 115 -------------------QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF 155
+ + + RLD V+Y+ L F + + A +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK----VGDIDTAKEI 537
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
D+V++ +SYSIL+N LC G A ++ ++ K ++P V++ ++I C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN--IDPDA 273
+D + +M+S+ +P+ +Y LIYGF + +A L+ +M + + PD
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
+T+N ++ G C++ Q+KEA +L +M+ + ++PD T++
Sbjct: 658 FTYNSILHGFCRQ---------------------NQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
+++G + + A + M+++G P+
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
++ +I + + + + +A ++ + SK ++ ALI +G ++ A + E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------GV--------MMIYGFCIVGQL 310
+ + YT NI+V+ LCK+GK++ L GV +I + G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+EA EL++ M K P YT++ +++GLCK GK + AK V M++ G+ P+ TY SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 371 MDGHCLVSEV 380
+ C +V
Sbjct: 347 LMEACKKGDV 356
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 184/386 (47%), Gaps = 18/386 (4%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
+L P + + ++ KM A + +M S + VT +I+I C G+
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ A VL ++L QP IT+T LI+ L V AL+ D+++++G + D +Y+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
+ R + V RA + ++ +G D +SY+IL+ L G+ + +L+ K+
Sbjct: 269 II----RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
+ P+VV Y+ +I +LC+D + +A NL M K + P+ ++Y LI FC G+L
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------M 300
A E L+ M++ PD +N ++ LCK GK A + G + M
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
G A ++ EM++ IDPD T++ ++ LC+EG V A +L M
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAKDI 386
P+VVTYN ++ G C + A ++
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINV 530
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 196/390 (50%), Gaps = 19/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
++ + ++R P +I K++ +++ P A+ + +E G ++ + LIN
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALIN 166
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + +I A VL ++ K + PDT+T+ +I LC ++ AL+ + +++ +
Sbjct: 167 GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQP 226
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++Y+IL + V AL+ D+++++G + D +Y+ +I G+CK G A
Sbjct: 227 TVITYTILI----EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+++R +E K +PDV+ Y ++ +L + L ++M S++ PNV TY+ LI
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---- 303
C G+++EA LL M K + PDAY+++ L+ C+EG++ A L M+ G
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 304 ----------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
C G+ +A E+ ++ P++ +++ + L G A +++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
MM G+ P+ +TYNS++ C V++A
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 169/331 (51%), Gaps = 19/331 (5%)
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G + +L +++KGY PD I T LIKG + +A++ +++ + + D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
+Y+ L F + + A + D + ++ F D V+Y+I+I LC G+ AL+
Sbjct: 159 FAYNALINGFCKM----NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
+L ++ QP V+ YT +I++ + V +A L EM+S+ + P++FTY +I G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------- 299
G + A E++ + K +PD ++NIL+ L +GK + + ++ M
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 300 ----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
+I C G+++EA LL M K + PDAY++ L+ C+EG++ A L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ G P++V YN+++ C + ++A +I
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 171/369 (46%), Gaps = 25/369 (6%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L LA+ + N+LL + P++I + ++ + + A+ L +M S G+ +M T +
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+I C G + AF ++ + KG +PD I++ L++ L + + + + ++
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ V+YSIL R ++ A+ + +G D SY LI C+ G+
Sbjct: 329 CDPNVVTYSILITTLCR----DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A++ L + PD+V Y T++ +LCK+ A ++ ++ PN +Y +
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
G A ++ EM++ IDPD T+N ++ LC+EG V
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV--------------- 489
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
EA ELL +M + P T++I++ G CK +++ A NVL M+ G +PN
Sbjct: 490 ------DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 365 VTYNSLMDG 373
TY L++G
Sbjct: 544 TTYTVLIEG 552
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 19/383 (4%)
Query: 7 LAVFIF-NRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
++V+ F +L+ P + F ++ L + + L +ME SG +VT + +
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
++ YC G+ A +L + KG D T+ LI LC + ++ + D+ +
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
++V+Y+ L FS + V A Q +++++ G + V+++ LI+G G K
Sbjct: 335 HPNEVTYNTLINGFS----NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
AL++ +E K + P V Y ++D LCK+ A Y M + TYT +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL--------- 296
G C G L EA LL+EM IDPD T++ L++G CK G+ K AK ++
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 297 --GVM---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
G++ +IY C +G LKEA + + M+ + D +TF++LV LCK GKV A+
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 352 LGVMMKQGVKPNVVTYNSLMDGH 374
+ M G+ PN V+++ L++G+
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGY 593
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 186/392 (47%), Gaps = 24/392 (6%)
Query: 10 FIFNRLLRTH----PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
F+F L+ T+ PS+ + ++ ++ ++ + M G ++ T + +
Sbjct: 147 FVFGALMTTYRLCNSNPSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 204
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
+ G+ +S L ++LK+ PD TF LI LC +++ + G+
Sbjct: 205 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 264
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
V+Y+ + + ++ + A++ D + ++G D +Y++LI+ LC+ +
Sbjct: 265 APTIVTYNTVLHWYCKK----GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
LLR + +++ P+ V Y T+I+ + V A L +EM+S + PN T+ ALI
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
G G KEA ++ M K + P ++ +L+DGLCK + A+ M
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
MI G C G L EA LL+EM IDPD T+S L++G CK G+ K AK +
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ + + G+ PN + Y++L+ C + + +A
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 180/389 (46%), Gaps = 19/389 (4%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ FL AV + N + + P I+ + ++ K+ + TA + ++ G+ N +
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
S LI C +G + A + ++ +G+ D TF L+ LC +V A +F +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ G + VS+ L + + +A D++ G +Y L+ GLCK
Sbjct: 576 SDGILPNTVSFDCLINGYG----NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G + A + L+ + D VMY T++ ++CK + A +L+ EMV + ILP+ +TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 242 TALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM- 299
T+LI G C G+ A E + N+ P+ + VDG+ K G+ K M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 300 -------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
MI G+ +G++++ +LL EM +N P+ T++IL+ G K V
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+ + ++ G+ P+ +T +SL+ G C
Sbjct: 812 TSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 196/434 (45%), Gaps = 62/434 (14%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A + N +L +P+ + F ++ + ++ A+ + + ME+ G+ + V+ +L+
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ C + A ++ + G IT+T +I GLC N + A+ +++ G
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRL----DQVSYSILINGLCKMG 182
D V+YS L F + V R + ++V + +R+ + + YS LI C+MG
Sbjct: 476 PDIVTYSALINGFCK-------VGR-FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
K A+++ + + D + ++ SLCK V +A M S ILPN ++
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI G+ G+ +A + DEM P +T+ L+ GLCK G ++ A+ L +
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK---- 344
++ C G L +A L EMV ++I PD+YT++ L+ GLC++GK
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 345 ------VKGAKNVL---------------------GVMMKQ-----GVKPNVVTYNSLMD 372
+ NVL G+ ++ G P++VT N+++D
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 373 GHCLVSEVNKAKDI 386
G+ + ++ K D+
Sbjct: 768 GYSRMGKIEKTNDL 781
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 174/368 (47%), Gaps = 18/368 (4%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + + ++ A L ++M S G+ N VT + LI+ + G A +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ KG P +++ L+ GLC NA+ A F+ + G + +++Y+ + +
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ A+ +++ G D V+YS LING CK+G+ K A +++ +I + P
Sbjct: 456 NGF----LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ ++Y+T+I + C+ + +A +Y M+ + + FT+ L+ C G++ EA E +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
M + I P+ +F+ L++G G+ A +V M ++ G C
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G L+EA + L + D ++ L+ +CK G + A ++ G M+++ + P+ TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 368 NSLMDGHC 375
SL+ G C
Sbjct: 692 TSLISGLC 699
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 176/379 (46%), Gaps = 19/379 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F+ + + P+ +G +L L K H A + + + V + L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + A S+ +++++ PD+ T+T+LI GLC + A+ F + A+G L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 128 -DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
++V Y+ F + + + F + + G D V+ + +I+G +MG+ +
Sbjct: 722 PNKVMYTC----FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
LL ++ + P++ Y ++ K K V+ +F LY ++ ILP+ T +L+
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G C L+ ++L + + ++ D YTFN+L+ C G++ A +++ VM G +
Sbjct: 838 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 307 --------------VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+ +E+ +L EM + I P++ + L++GLC+ G +K A V
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 353 GVMMKQGVKPNVVTYNSLM 371
M+ + P V ++++
Sbjct: 958 EEMIAHKICPPNVAESAMV 976
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 14/250 (5%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+Q +L+ + GF + + ++ + K G+ L+++ + + PDV +
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I+ LC + + L +M P + TY +++ +C G+ K A ELLD M +K
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEAT 314
+D D T+N+L+ LC+ ++ +L M +I GF G++ A+
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+LL+EM++ + P+ TF+ L+DG EG K A + +M +G+ P+ V+Y L+DG
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 375 CLVSEVNKAK 384
C +E + A+
Sbjct: 419 CKNAEFDLAR 428
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 170/389 (43%), Gaps = 19/389 (4%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSG-IISNMV 60
S L AV +F +++ P + +++ L + AI + + E+ G ++ N V
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
+ ++ GQ ++ G+ PD +T +I G ++++ ++
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
Q + +Y+IL +S+R V + + ++ G D+++ L+ G+C+
Sbjct: 786 GNQNGGPNLTTYNILLHGYSKR----KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+ L++L+ + V+ D + +I C + + AF+L M S I + T
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA-------- 292
A++ + +E+ +L EM + I P++ + L++GLC+ G +K A
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961
Query: 293 ------KNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
NV M+ G+ EAT LL M+ + P +F+ L+ CK G V
Sbjct: 962 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 1021
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
A + VM G+K ++V+YN L+ G C
Sbjct: 1022 EALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 159/371 (42%), Gaps = 18/371 (4%)
Query: 17 RTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP 76
R + P+ + + + + K + I QM++ G ++VT++ +I+ Y +G+I
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
+L ++ + P+ T+ L+ G V + + ++ G D+++ L
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
L + ++ L+ + +G +D+ ++++LI+ C G+ A L++ +
Sbjct: 837 LG----ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
+ D ++ L ++ ++ + EM + I P Y LI G C VG +K
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM-------IYGF----- 304
A + +EM+ I P + +V L K GK A +L M+ I F
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Query: 305 --CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
C G + EA EL M + D ++++L+ GLC +G + A + M G
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 363 NVVTYNSLMDG 373
N TY +L+ G
Sbjct: 1073 NATTYKALIRG 1083
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 26/339 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ + +L K K T+ L + +GI+ + +T L+ C + +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + +G + D TF LI C N ++ A + + G LD+ + + +R
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
Q + ++ QG + Y LINGLC++G K A + ++ + P
Sbjct: 912 N----HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
V + ++ +L K +A L M+ +++P + ++T L++ C G + EA EL
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
M + D ++N+L+ GLC + G + A EL +EM
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAK---------------------GDMALAFELYEEMK 1066
Query: 322 TKNIDPDAYTFSILVDG-LCKEGKVKGAKNVLGVMMKQG 359
+A T+ L+ G L +E GA +L ++ +G
Sbjct: 1067 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 188/373 (50%), Gaps = 21/373 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +L SL K+ A +ME+ G + M+ ++N C G A ++KIL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL--DQVSYSILTLKFSRRVI 144
K G+ D+ T+L+ G C ++ AL+ D V+++ + VSYSIL +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILI----HGLC 277
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
++ A D + +G + +Y++LI LC G A L ++ + +P+V
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
YT +ID LC+D + +A + +MV RI P+V TY ALI G+C G++ A ELL M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQL 310
+ P+ TFN L++GLC+ GK A ++L M+ I G C G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
A +LL M +I+PD TF+ +++ CK+GK A LG+M+++G+ + VT +L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 371 MDGHCLVSEVNKA 383
+DG C V + A
Sbjct: 518 IDGVCKVGKTRDA 530
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 173/330 (52%), Gaps = 18/330 (5%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N V+ SILI+ C +G++ AF + ++ +KG QP T T+T LIK LC + +A
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
D+++ +G + + +Y++L R ++ A +V ++Y+ LING
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCR----DGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
CK G+ PA +LL +E + +P+V + +++ LC+ A +L M+ + P+
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
+ +Y LI G C G + A +LL M +I+PD TF +++ CK+GK A LG
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 298 VM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
+M +I G C VG+ ++A +L+ +V I ++ ++++D L K
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
KVK +LG + K G+ P+VVTY +L+DG
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 21/276 (7%)
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
GFRL+ YS L + ++ + A + + A GF + + Y ++N LCK G
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFL----AYVTYRRMEADGFVVGMIDYRTIVNALCKNGY 210
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI--LPNVFTY 241
T+ A + KI D + T+++ C+ + DA ++ +++SK + PN +Y
Sbjct: 211 TEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSY 269
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
+ LI+G C VG+L+EA L D+M K P T+ +L+ LC G + A N+ M
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 300 ------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
+I G C G+++EA + +MV I P T++ L++G CK+G+V
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
A +L VM K+ KPNV T+N LM+G C V + KA
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 18/383 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F+ ++ P++ + ++ L + A + +M I +++T + LIN
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G++ AF +L + K+ +P+ TF L++GLC + +A+ ++ G
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D VSY++L R + A + + D ++++ +IN CK G+ A
Sbjct: 440 DIVSYNVLIDGLCRE----GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L + K + D V TT+ID +CK DA + +V RIL + ++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---- 303
++KE +L ++ + P T+ LVDGL + G + G+ +L +M + G
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 304 ----------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
C G+++EA +LL M + P+ T++++V G GK+ A +
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 354 VMMKQGVKPNVVTYNSLMDGHCL 376
M+++G + N Y+SL+ G L
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVL 698
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 183/442 (41%), Gaps = 86/442 (19%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + R+L +P I+ + ++ L + H TA L M I + +T + +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G+ A + L +L+KG D +T TTLI G+C + + AL F L
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL----------FIL 534
Query: 128 DQ-VSYSILTLKFSRRVI-----SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ V ILT S VI V+ L + G V+Y+ L++GL +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G + ++L ++ P+V YT II+ LC+ V +A L S M + PN TY
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG------------------- 282
T ++ G+ G+L A E + MV + + + ++ L+ G
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 283 ----------------------------------LCKEGKVKGA----KNVL--GV---- 298
LCKEG+ + +NVL GV
Sbjct: 715 ALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK 774
Query: 299 ---MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN-VLGV 354
+++ +C + + EL+ ++ P +F +++ GL KEG + A+ V+ +
Sbjct: 775 AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Query: 355 MMKQGV--KPNVVTY-NSLMDG 373
+ GV K V+TY LM+G
Sbjct: 835 LTSNGVVEKSGVLTYVECLMEG 856
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
GFRL+ YS L+ L K+ A R++E ++ Y TI+++LCK+ A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVD 281
S+++ + + T+L+ GFC L++A ++ D M + P++ +++IL+
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
GLC+ VG+L+EA L D+M K P T+++L+ LC
Sbjct: 275 GLCE---------------------VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G + A N+ M+ +G KPNV TY L+DG C ++ +A +
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 133/312 (42%), Gaps = 29/312 (9%)
Query: 6 RLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
R A+FI L++ + IL L K +++ ++ G++ ++VT + L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
++ G I +F +L + G P+ +T +I GLC +V+ A + + G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING--LCKMGQ 183
+ V+Y+++ + ++ + RAL+ +V +G+ L+ YS L+ G L + G
Sbjct: 648 SPNHVTYTVMVKGY----VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
Query: 184 TKPALQLLRKIEGKLVQPDVV----------------MYTTIIDSLCKDKLVTDAFNLYS 227
+ I + P+ + + ++ LCK+ ++ +L
Sbjct: 704 DNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQ 763
Query: 228 EMVSKRILPNVFTYTAL---IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
++ + VF A+ + +C + + EL+ ++ P +F +++ GL
Sbjct: 764 NVLER----GVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLK 819
Query: 285 KEGKVKGAKNVL 296
KEG + A+ ++
Sbjct: 820 KEGDAERARELV 831
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 179/354 (50%), Gaps = 26/354 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS++ F I++ K+ A S + G++ ++ + +ILIN C +G I A +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ + K G +PD++T+ L KG L + A + D++ +G D ++Y+IL +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQV-SYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ L D++++GF L+ + S++++GLCK G+ AL L +++ +
Sbjct: 340 ----LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+V Y+ +I LCK A LY EM KRILPN T+ AL+ G C G L EA L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
LD +++ D +NI++DG K G CI +EA EL +
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSG-----------------CI----EEALELFKVV 494
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+ I P TF+ L+ G CK + A+ +L V+ G+ P+VV+Y +LMD +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 179/361 (49%), Gaps = 26/361 (7%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ ++ L + + A+ E I ++V+ + +++ YC LG + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K G P + LI GLCL + AL+ D+ G D V+Y+IL F +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM-- 307
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD-VVM 205
+ A + D++ +G D ++Y+IL+ G C++G L LL+ + + + + ++
Sbjct: 308 --ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+ ++ LCK + +A +L+++M + + P++ Y+ +I+G C +G+ A L DEM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
K I P++ T L+ GLC++G L EA LLD +++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKG---------------------MLLEARSLLDSLISSGE 464
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
D ++I++DG K G ++ A + V+++ G+ P+V T+NSL+ G+C + +A+
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 386 I 386
I
Sbjct: 525 I 525
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 191/450 (42%), Gaps = 82/450 (18%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
F+ +A F +L+ PS+ ++ L + A+ L+ M G+ + VT +
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
IL + LG I A+ V+ +L KG PD IT+T L+ G C + L D++++
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
GF L+ + + L + + AL + + A G D V+YSI+I+GLCK+G+
Sbjct: 357 GFELNSIIPCSVMLS---GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 184 TKPALQLLRKIEGKLVQP-----------------------------------DVVMYTT 208
AL L ++ K + P D+V+Y
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD------ 262
+ID K + +A L+ ++ I P+V T+ +LIYG+C + EA ++LD
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 263 -----------------------------EMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
EM + I P T++++ GLC+ K +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+VL I+ C G L +M ++ I PD T++ ++ LC+ + GA L
Sbjct: 594 HVLR-ERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+M + + + TYN L+D C+ + KA
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 124/232 (53%), Gaps = 15/232 (6%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
++ +YS +++GLC+ + + A+ LR E K + P VV + +I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
++ ++P+V+++ LI G C+VG + EA EL +M ++PD+ T+NIL G
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 287 GKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT- 331
G + GA V+ M ++ G C +G + LL +M+++ + ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
S+++ GLCK G++ A ++ M G+ P++V Y+ ++ G C + + + A
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 57/391 (14%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
V + + L R SII +L+ L K A+SL +QM++ G+ ++V SI+I+
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
C LG+ A + ++ K P++ T L+ GLC + A D +++ G LD
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 129 QVSYSIL------------TLKFSRRVISP--TP-----------------VQRALQFHD 157
V Y+I+ L+ + VI TP + A + D
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK-- 215
+ G VSY+ L++ G TK +L R+++ + + P V Y+ I LC+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 216 ----------DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+++ +M S+ I P+ TY +I C V L A L+ M
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK 311
++N+D + T+NIL+D LC G ++ A + + + +I C+ G +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
A +L +++ + + +S +++ LC+
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 138/312 (44%), Gaps = 20/312 (6%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A+++++ + P+ G +L L + A SL + SSG ++V +I+I
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ Y G I A + +++ G P TF +LI G C + A + D + G
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 127 LDQVSYSILTLKFSR--RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
VSY+ L ++ S ++R ++ A+G V+YS++ GLC+ +
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMK------AEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 185 K------------PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+ Q LR +E + + PD + Y TII LC+ K ++ AF M S+
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+ + TY LI C+ G +++A + + +N+ + + L+ C +G + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 293 KNVLGVMMIYGF 304
+ ++ GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ T TPS+ F ++ K ++ A + ++ G+ ++V+ + L++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + G + ++ +G P +T++ + KGLC +G++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-----------------RGWKH 589
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ ++ V+ ++ Q D+ ++G DQ++Y+ +I LC++ A
Sbjct: 590 ENCNH----------VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L ++ + + Y +IDSLC + A + + + + + F YT LI
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
C+ G + A +L +++ + + ++ +++ LC+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 63/241 (26%)
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
RK E + D++++ + + ++V D+ + +M + + + +Y +++Y F
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-- 169
Query: 251 VGQLKEATELLDEMVTKNI-DPDAYTFNILVDGLCKEGKVKGA---------KNV----- 295
+E ++ D V K I D + +T++ +VDGLC++ K++ A K++
Sbjct: 170 ----RETDKMWD--VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 296 -----------LGV------------------------MMIYGFCIVGQLKEATELLDEM 320
LG ++I G C+VG + EA EL +M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
++PD+ T++IL G G + GA V+ M+ +G+ P+V+TY L+ G C + +
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 381 N 381
+
Sbjct: 344 D 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 306 IVGQLKEATELLDEMVTKNI-DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
++ +E ++ D V K I D + +T+S +VDGLC++ K++ A L + + P+V
Sbjct: 165 VLYHFRETDKMWD--VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222
Query: 365 VTYNSLMDGHCLVSEVNKAK 384
V++NS+M G+C + V+ AK
Sbjct: 223 VSFNSIMSGYCKLGFVDMAK 242
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 202/423 (47%), Gaps = 54/423 (12%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S L L++ FN ++ P F +LT +V + S ++ +S ++ ++ +
Sbjct: 107 SQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYS 165
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
ILI C G+I +F +L ++ + G+ P+ + +TTLI G C ++++A ++
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
G ++ +Y++L + + ++ + ++ + G + +Y+ ++N LCK
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVK----KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+TK A Q+ ++ + V ++V Y T+I LC++ + +A + +M S I PN+ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
LI GFC VG+L +A L ++ ++ + P T+NILV G C++G GA ++ M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 300 -----------------------------------------------MIYGFCIVGQLKE 312
+I+GFCI GQ+ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A+ L MV KN +P+ ++ ++ G CKEG A +L M ++ + PNV +Y +++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 373 GHC 375
C
Sbjct: 522 VLC 524
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 164/322 (50%), Gaps = 25/322 (7%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
+ +M+ G+ N+ T + ++N C G+ AF V ++ ++G + +T+ TLI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
GLC ++ A + D + + G + ++Y+ L F + +AL D+ ++
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF----CGVGKLGKALSLCRDLKSR 367
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G V+Y+IL++G C+ G T A ++++++E + ++P V YT +ID+ + + A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
L M ++P+V TY+ LI+GFCI GQ+ EA+ L MV KN +P+ +N ++ G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
CKEG A +LL EM K + P+ ++ +++ LCKE
Sbjct: 488 YCKEGSS---------------------YRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 343 GKVKGAKNVLGVMMKQGVKPNV 364
K K A+ ++ M+ G+ P+
Sbjct: 527 RKSKEAERLVEKMIDSGIDPST 548
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 154/297 (51%), Gaps = 24/297 (8%)
Query: 106 LNAQVQR-----ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVV 160
+N+ VQ ++ + +++V GF ++ L L F V+ + + F ++
Sbjct: 101 INSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYL-LTF---VVGSSSFNQWWSFFNENK 156
Query: 161 AQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVT 220
++ LD S+ ILI G C+ G+ + + LL ++ P+VV+YTT+ID CK +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
A +L+ EM ++ N TYT LI G G K+ E+ ++M + P+ YT+N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 281 DGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNID 326
+ LCK+G+ K A V M +I G C +L EA +++D+M + I+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
P+ T++ L+DG C GK+ A ++ + +G+ P++VTYN L+ G C + + A
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 4/264 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F+ + + +I+ + ++ L + A + QM+S GI N++T + LI+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C +G++ A S+ + +G P +T+ L+ G C A + ++ +G +
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+V+Y+IL F+R +++A+Q + G D +YS+LI+G C GQ A
Sbjct: 407 SKVTYTILIDTFAR----SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L + + K +P+ V+Y T+I CK+ A L EM K + PNV +Y +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 248 FCIVGQLKEATELLDEMVTKNIDP 271
C + KEA L+++M+ IDP
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDP 546
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 19/237 (8%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
FRL Y ++IN + ++ ++ P + ++ + +
Sbjct: 94 FRL----YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
+ ++E SK +L +V+++ LI G C G+++++ +LL E+ P+ + L+DG
Sbjct: 150 SFFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 284 CKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
CK+G+++ AK++ M +I G G K+ E+ ++M + P+
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
YT++ +++ LCK+G+ K A V M ++GV N+VTYN+L+ G C ++N+A +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 179/354 (50%), Gaps = 26/354 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS++ F I++ K+ A S + G++ ++ + +ILIN C +G I A +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ + K G +PD++T+ L KG L + A + D++ +G D ++Y+IL +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQV-SYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ L D++++GF L+ + S++++GLCK G+ AL L +++ +
Sbjct: 340 ----LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+V Y+ +I LCK A LY EM KRILPN T+ AL+ G C G L EA L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
LD +++ D +NI++DG K G CI +EA EL +
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSG-----------------CI----EEALELFKVV 494
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+ I P TF+ L+ G CK + A+ +L V+ G+ P+VV+Y +LMD +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 179/361 (49%), Gaps = 26/361 (7%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ ++ L + + A+ E I ++V+ + +++ YC LG + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K G P + LI GLCL + AL+ D+ G D V+Y+IL F +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM-- 307
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD-VVM 205
+ A + D++ +G D ++Y+IL+ G C++G L LL+ + + + + ++
Sbjct: 308 --ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+ ++ LCK + +A +L+++M + + P++ Y+ +I+G C +G+ A L DEM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
K I P++ T L+ GLC++G L EA LLD +++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKG---------------------MLLEARSLLDSLISSGE 464
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
D ++I++DG K G ++ A + V+++ G+ P+V T+NSL+ G+C + +A+
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 386 I 386
I
Sbjct: 525 I 525
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 191/450 (42%), Gaps = 82/450 (18%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
F+ +A F +L+ PS+ ++ L + A+ L+ M G+ + VT +
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
IL + LG I A+ V+ +L KG PD IT+T L+ G C + L D++++
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
GF L+ + + L + + AL + + A G D V+YSI+I+GLCK+G+
Sbjct: 357 GFELNSIIPCSVMLS---GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 184 TKPALQLLRKIEGKLVQP-----------------------------------DVVMYTT 208
AL L ++ K + P D+V+Y
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD------ 262
+ID K + +A L+ ++ I P+V T+ +LIYG+C + EA ++LD
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 263 -----------------------------EMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
EM + I P T++++ GLC+ K +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+VL I+ C G L +M ++ I PD T++ ++ LC+ + GA L
Sbjct: 594 HVLR-ERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+M + + + TYN L+D C+ + KA
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 124/232 (53%), Gaps = 15/232 (6%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
++ +YS +++GLC+ + + A+ LR E K + P VV + +I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
++ ++P+V+++ LI G C+VG + EA EL +M ++PD+ T+NIL G
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 287 GKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT- 331
G + GA V+ M ++ G C +G + LL +M+++ + ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
S+++ GLCK G++ A ++ M G+ P++V Y+ ++ G C + + + A
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 57/391 (14%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
V + + L R SII +L+ L K A+SL +QM++ G+ ++V SI+I+
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
C LG+ A + ++ K P++ T L+ GLC + A D +++ G LD
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 129 QVSYSIL------------TLKFSRRVISP--TP-----------------VQRALQFHD 157
V Y+I+ L+ + VI TP + A + D
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK-- 215
+ G VSY+ L++ G TK +L R+++ + + P V Y+ I LC+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 216 ----------DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+++ +M S+ I P+ TY +I C V L A L+ M
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK 311
++N+D + T+NIL+D LC G ++ A + + + +I C+ G +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
A +L +++ + + +S +++ LC+
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 138/312 (44%), Gaps = 20/312 (6%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A+++++ + P+ G +L L + A SL + SSG ++V +I+I
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ Y G I A + +++ G P TF +LI G C + A + D + G
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 127 LDQVSYSILTLKFSR--RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
VSY+ L ++ S ++R ++ A+G V+YS++ GLC+ +
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMK------AEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 185 K------------PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+ Q LR +E + + PD + Y TII LC+ K ++ AF M S+
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+ + TY LI C+ G +++A + + +N+ + + L+ C +G + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 293 KNVLGVMMIYGF 304
+ ++ GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F ++ T TPS+ F ++ K ++ A + ++ G+ ++V+ + L++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + G + ++ +G P +T++ + KGLC +G++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-----------------RGWKH 589
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ ++ V+ ++ Q D+ ++G DQ++Y+ +I LC++ A
Sbjct: 590 ENCNH----------VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L ++ + + Y +IDSLC + A + + + + + F YT LI
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
C+ G + A +L +++ + + ++ +++ LC+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 63/241 (26%)
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
RK E + D++++ + + ++V D+ + +M + + + +Y +++Y F
Sbjct: 117 FRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-- 169
Query: 251 VGQLKEATELLDEMVTKNI-DPDAYTFNILVDGLCKEGKVKGA---------KNV----- 295
+E ++ D V K I D + +T++ +VDGLC++ K++ A K++
Sbjct: 170 ----RETDKMWD--VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 296 -----------LGV------------------------MMIYGFCIVGQLKEATELLDEM 320
LG ++I G C+VG + EA EL +M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
++PD+ T++IL G G + GA V+ M+ +G+ P+V+TY L+ G C + +
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 381 N 381
+
Sbjct: 344 D 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 306 IVGQLKEATELLDEMVTKNI-DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
++ +E ++ D V K I D + +T+S +VDGLC++ K++ A L + + P+V
Sbjct: 165 VLYHFRETDKMWD--VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222
Query: 365 VTYNSLMDGHCLVSEVNKAK 384
V++NS+M G+C + V+ AK
Sbjct: 223 VSFNSIMSGYCKLGFVDMAK 242
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 184/376 (48%), Gaps = 19/376 (5%)
Query: 14 RLLRTHPTPSIIE-FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHL 72
RL R H I G +L ++K+ T ++ +G N+ +IL+N +C
Sbjct: 194 RLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
G I A V +I K+ QP ++F TLI G C + + + R D +Y
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
S L + + A D++ +G + V ++ LI+G + G+ + +
Sbjct: 314 SALINALCKE----NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
K+ K +QPD+V+Y T+++ CK+ + A N+ M+ + + P+ TYT LI GFC G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG--------------V 298
++ A E+ EM I+ D F+ LV G+CKEG+V A+ L
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
MM+ FC G + +LL EM + P T+++L++GLCK G++K A +L M+
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 359 GVKPNVVTYNSLMDGH 374
GV P+ +TYN+L++GH
Sbjct: 550 GVVPDDITYNTLLEGH 565
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 146/274 (53%), Gaps = 18/274 (6%)
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
F+ +++ GF L+ ++IL KF + + A + D++ + + VS++ LI
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKE----GNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
NG CK+G +L ++E +PDV Y+ +I++LCK+ + A L+ EM + ++
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
PN +T LI+G G++ E +M++K + PD +N LV+G CK G + A+N+
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 296 LGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
+ M +I GFC G ++ A E+ EM I+ D FS LV G+CK
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
EG+V A+ L M++ G+KP+ VTY +MD C
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 13 NRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHL 72
+++ ++ P + + ++ +L K A L +M G+I N V + LI+ +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
G+I K+L KG QPD + + TL+ G C N + A D ++ +G R D+++Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+ L F R V+ AL+ ++ G LD+V +S L+ G+CK G+ A + LR
Sbjct: 419 TTLIDGFCR----GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
++ ++PD V YT ++D+ CK F L EM S +P+V TY L+ G C +G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDG 282
Q+K A LLD M+ + PD T+N L++G
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 25/328 (7%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + + P+++ F ++ K+ + L HQME S ++ T S LIN C
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ A + ++ K+G P+ + FTTLI G N ++ + + ++++G + D V
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+ L F + + A D ++ +G R D+++Y+ LI+G C+ G + AL++
Sbjct: 382 LYNTLVNGFCKN----GDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++++ ++ D V ++ ++ +CK+ V DA EM+ I P+ TYT ++ FC
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
G + +LL EM + P T+N+L++GLCK +GQ+
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK---------------------LGQM 536
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDG 338
K A LLD M+ + PD T++ L++G
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+V ++ +++ CK+ ++DA ++ E+ + + P V ++ LI G+C VG L E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
+M PD +T++ L++ LCKE K+ GA + M +I+G
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G++ E +M++K + PD ++ LV+G CK G + A+N++ M+++G++P+ +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 368 NSLMDGHCLVSEVNKAKDI 386
+L+DG C +V A +I
Sbjct: 419 TTLIDGFCRGGDVETALEI 437
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
++D + K + Y E++ NV+ + L+ FC G + +A ++ DE+ +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
++ P +FN L++G CK VG L E L +M P
Sbjct: 270 SLQPTVVSFNTLINGYCK---------------------VGNLDEGFRLKHQMEKSRTRP 308
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
D +T+S L++ LCKE K+ GA + M K+G+ PN V + +L+ GH E++ K+
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 186/390 (47%), Gaps = 26/390 (6%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
F LA ++N +L+ + +P++ FG ++ L K A + M GI N VT +
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
ILI+ C G A + ++ G PD++ L+ G C ++ A +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 124 GFRLDQVSYSILT--LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
GF L YS L L +RR +A + + +++ + + D + Y+ILI GL K
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYT------QAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ + AL+LL + K + PD Y +I +LC L+ + +L EM P+ T+
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
T LI C G ++EA E+ E+ P TFN L+DGLCK G++K A+ +L M +
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 302 ---------------YGFCIV---GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
F + G + +A L PD ++++L++G C+ G
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+ GA +L V+ +G+ P+ VTYN+L++G
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 25/307 (8%)
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
AF+V ++LK P+ TF L+ GL + A + DD+ +G ++V+Y+IL
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
+R A + ++ G D V+++ L++G CK+G+ A +LLR E
Sbjct: 242 GLCQR----GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
+ Y+++ID L + + T AF LY+ M+ K I P++ YT LI G G++++A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELL 317
+LL M +K I PD Y +N ++ LC G L+E L
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRG---------------------LLEEGRSLQ 396
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
EM PDA T +IL+ +C+ G V+ A+ + + K G P+V T+N+L+DG C
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 378 SEVNKAK 384
E+ +A+
Sbjct: 457 GELKEAR 463
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 167/412 (40%), Gaps = 58/412 (14%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ ++ L + + Y A L M I +++ +ILI G+I A +L+ +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
KG PDT + +IK LC ++ ++ D +++IL R +
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL-- 423
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
V+ A + ++ G +++ LI+GLCK G+ K A LL K+E + +P +
Sbjct: 424 --VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME--VGRPASLFL 479
Query: 207 ------TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
D++ + + A+ + P++ +Y LI GFC G + A +L
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 261 LDEMVTKNIDPDAYTFNILVDGL---------------------------------CKEG 287
L+ + K + PD+ T+N L++GL C++
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKR 599
Query: 288 KVKGAKNVLGVMMIYGFCI-------------VGQLKEATELLDEMVTKNIDPDAYTFSI 334
KV A N+ + C+ G+ + A L E+ T+ + ++I
Sbjct: 600 KVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTI 659
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ GLC+ G+ A V V+ ++ + + L+ G C +++ A ++
Sbjct: 660 WLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 156/380 (41%), Gaps = 35/380 (9%)
Query: 14 RLLRTHPT----PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
+LL + P+ P + ++ +L SL +M + + T +ILI
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA-LQFHDDVVAQGFRLD 128
C G + A + +I K G P TF LI GLC + +++ A L H V + L
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASL- 477
Query: 129 QVSYSILTLKFSRRVISPTPVQRA--LQFHDDVVA---QGFRLDQVSYSILINGLCKMGQ 183
L L S T V+ L+ + D+ G D VSY++LING C+ G
Sbjct: 478 -----FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
AL+LL ++ K + PD V Y T+I+ L + +AF L+ R P V Y +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRS 590
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----------- 292
L+ C ++ A L + + K D T N ++ KEG+ + A
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRK 649
Query: 293 -KNVLGVMMIY--GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
+ LG I+ G C G+ EA + + K I + L+ GLCK ++ A
Sbjct: 650 DELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAI 709
Query: 350 NVLGVMMKQGVK--PNVVTY 367
V + K P V Y
Sbjct: 710 EVFLYTLDNNFKLMPRVCNY 729
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 57/235 (24%)
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
Q +++ + G +D + +LI+ KMG + A++ +++ +PDV Y I+
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 213 LCKDK-LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
+ +++ AF +Y+EM+ C N P
Sbjct: 172 MMREEVFFMLAFAVYNEMLK-----------------C------------------NCSP 196
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
+ YTF IL+DGL K+G+ +A ++ D+M + I P+ T
Sbjct: 197 NLYTFGILMDGLYKKGRTS---------------------DAQKMFDDMTGRGISPNRVT 235
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++IL+ GLC+ G A+ + M G P+ V +N+L+DG C + + +A ++
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 132/334 (39%), Gaps = 60/334 (17%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQME----SSGIIS 57
+ +R A IF + ++ +PS+ F ++ L K A L H+ME +S +
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLR 480
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
+ + + G I A+ LA G PD +++ LI G C + AL+
Sbjct: 481 LSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL- 539
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
++L LK +SP D V+Y+ LING
Sbjct: 540 --------------LNVLQLK----GLSP--------------------DSVTYNTLING 561
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
L ++G+ + A +L + P V Y +++ C+ + V AFNL+ + + K +
Sbjct: 562 LHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
T + F G+ + A L E+ T+ + + I + GLC+ G+ A V
Sbjct: 620 DETANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678
Query: 298 VM--------------MIYGFCIVGQLKEATELL 317
V+ +I+G C QL A E+
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 58/418 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ ++L L K AI + M SSGII + + L+N C G + +A +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS-ILTLKFS 140
+ K+ GY +T+T+ L++GLC+ + ++LQF + ++ +G + +YS +L +
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R A++ D+++ +G + VSY++L+ G CK G+T A+ L R++ K +
Sbjct: 224 ER-----GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+VV Y ++ LC D +A +L +EM P+V TY LI G+ ++A ++
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 261 LDEMVTKN--IDPDAYTFNILVDGLCKEGKV------------------KGAKNVLGVM- 299
L EM N A ++N ++ LCKEGKV +G N +G +
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398
Query: 300 ------------------------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
+I C G A +LL EM DPDA
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMK-QGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+T+S L+ GLC EG GA VL +M + + KP V +N+++ G C + + A ++
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEV 516
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 156/309 (50%), Gaps = 20/309 (6%)
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
+FS L ++ G++P+ T L+ LC ++++A++ + +V+ G D +Y+ L
Sbjct: 90 SFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVN 149
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
+ +R V A+Q + + G+ + V+Y+ L+ GLC +G +LQ + ++ K
Sbjct: 150 QLCKR----GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
+ P+ Y+ ++++ K++ +A L E++ K PN+ +Y L+ GFC G+ +A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYG 303
L E+ K + ++NIL+ LC +G+ + A ++L M +I
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 304 FCIVGQLKEATELLDEMVTKN--IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G+ ++A ++L EM N A +++ ++ LCKEGKV L M+ + K
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 362 PNVVTYNSL 370
PN TYN++
Sbjct: 386 PNEGTYNAI 394
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 27/359 (7%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
RL++ P+ + +L + K + A+ L ++ G N+V+ ++L+ +C G
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+ A ++ ++ KG++ + +++ L++ LC + + + A ++ V+Y+
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 134 IL--TLKFSRRVISPTPVQRALQFHDDVVA--QGFRLDQVSYSILINGLCKMGQTKPALQ 189
IL +L F R ++ALQ ++ FR+ SY+ +I LCK G+ ++
Sbjct: 321 ILINSLAFHGR------TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCK-DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
L ++ + +P+ Y I SLC+ + V +AF + + +K+ Y ++I
Sbjct: 375 CLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSL 433
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------- 299
C G A +LL EM DPDA+T++ L+ GLC EG GA VL +M
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPT 493
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
MI G C + + A E+ + MV K P+ T++ILV+G+ E +++ AK VL
Sbjct: 494 VDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 151/336 (44%), Gaps = 36/336 (10%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + + ++ P+++ + +LT K A++L ++ + G +N+V+ +IL+
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA--QGF 125
C C G+ A S+LA++ P +T+ LI L + + ++ALQ ++ F
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 126 RLDQVSYSILTLKFSR----------------RVISPTP----VQRALQFHDDVVAQGFR 165
R+ SY+ + + + R P +L H+ V + F
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFY 409
Query: 166 LDQV-----------SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
+ Q Y +I LC+ G T A QLL ++ PD Y+ +I LC
Sbjct: 410 IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 215 KDKLVTDAFNLYSEMV-SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
+ + T A + S M S+ P V + A+I G C + + A E+ + MV K P+
Sbjct: 470 LEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNE 529
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQ 309
T+ ILV+G+ E +++ AK VL + + ++GQ
Sbjct: 530 TTYAILVEGIAHEDELELAKEVLDELRLRK--VIGQ 563
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
I G +PD+ + D + ++D+F+ +V+ PNV T L+Y C +
Sbjct: 62 ITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR 121
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------------- 299
LK+A +++ MV+ I PDA + LV+ LCK G V A ++ M
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
++ G C++G L ++ + ++ ++ K + P+A+T+S L++ KE A +L ++ +G
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 360 VKPNVVTYNSLMDGHC 375
+PN+V+YN L+ G C
Sbjct: 242 GEPNLVSYNVLLTGFC 257
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 197/376 (52%), Gaps = 23/376 (6%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
+++ ++R P++ F ++ +L K A + M+ G N+V+ + LI+ Y
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 70 CHL---GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C L G++ A +VL ++++ P+ TF LI G + + +++ +++ Q +
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ +SY+ L + + + A+ D +V+ G + + ++Y+ LING CK K
Sbjct: 329 PNVISYNSLI----NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
AL + ++G+ P MY +ID+ CK + D F L EM + I+P+V TY LI
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G C G ++ A +L D++ +K + PD TF+IL++G C++G+ + A +L M
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 300 -------MIYGFCIVGQLKEATELLDEMV-TKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
++ G+C G LK AT + +M + + + ++++L+ G ++GK++ A +
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 352 LGVMMKQGVKPNVVTY 367
L M+++G+ PN +TY
Sbjct: 564 LNEMLEKGLVPNRITY 579
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 184/362 (50%), Gaps = 21/362 (5%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ +L+K + +M I N+ T +++IN C G++ A V+ + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 90 YQPDTITFTTLIKGLCL---NAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
P+ +++ TLI G C N ++ +A ++V + +++IL F + P
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+++ +++ Q + + +SY+ LINGLC G+ A+ + K+ VQP+++ Y
Sbjct: 314 G----SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+I+ CK+ ++ +A +++ + + +P Y LI +C +G++ + L +EM
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------------MIYGFCIVGQLKEA 313
+ I PD T+N L+ GLC+ G ++ AK + + ++ G+C G+ ++A
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKA 489
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMD 372
LL EM + P T++I++ G CKEG +K A N+ M K+ ++ NV +YN L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 373 GH 374
G+
Sbjct: 550 GY 551
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 55/348 (15%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ ++ +P++ F ++ K + P ++ + +M + N+++ + LIN C
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ G+I A S+ K++ G QP+ IT+ LI G C N ++ AL V QG
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG------ 396
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
P R Y++LI+ CK+G+ L
Sbjct: 397 ---------------AVPTTRM------------------YNMLIDAYCKLGKIDDGFAL 423
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++E + + PDV Y +I LC++ + A L+ ++ SK LP++ T+ L+ G+C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCR 482
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------- 299
G+ ++A LL EM + P T+NI++ G CKEG +K A N+ M
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 300 ----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
++ G+ G+L++A LL+EM+ K + P+ T+ I+ + + +G
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 17/236 (7%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G++L +S L+ L K ++ + +++ + +QP+V + +I++LCK + A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIV---GQLKEATELLDEMVTKNIDPDAYTFNIL 279
++ +M PNV +Y LI G+C + G++ +A +L EMV ++ P+ TFNIL
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 280 VDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNI 325
+DG K+ + G+ V M +I G C G++ EA + D+MV+ +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
P+ T++ L++G CK +K A ++ G + QG P YN L+D +C + +++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 132/281 (46%), Gaps = 41/281 (14%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + ++++ P++I + ++ K A+ + ++ G + ++LI+
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC LG+I F++ ++ ++G PD T+ LI GLC N ++ A + D + ++G
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP- 468
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V++ IL+ G C+ G+++ A
Sbjct: 469 ---------------------------------------DLVTFHILMEGYCRKGESRKA 489
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-NVFTYTALIY 246
LL+++ ++P + Y ++ CK+ + A N+ ++M +R L NV +Y L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
G+ G+L++A LL+EM+ K + P+ T+ I+ + + +G
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ L+ A+ +F + P+ + ++ + K+ +L +ME GI+ ++ T
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ LI C G I A + ++ KG PD +TF L++G C + ++A ++
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
G + ++Y+I+ + + Q + + R++ SY++L+ G +
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE---RRLRMNVASYNVLLQGYSQK 554
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
G+ + A LL ++ K + P+ + Y + + + V D
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 197/391 (50%), Gaps = 15/391 (3%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+S A+ NR+ T P+++ + +L + K + + M G +
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC-----LNAQV-QRALQ 115
+ L++ YC G +A+ +L K++K G+ P + + LI +C LN + A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
+ +++A G L++++ S F+R + S ++A +++ QGF D +YS ++
Sbjct: 435 AYSEMLAAGVVLNKINVS----SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
N LC + + A L +++ + DV YT ++DS CK L+ A ++EM
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
PNV TYTALI+ + ++ A EL + M+++ P+ T++ L+DG CK G+V+ A +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 296 LGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
M C + + + + P+ T+ L+DG CK +V+ A+ +L M
Sbjct: 611 FERM-----CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+G +PN + Y++L+DG C V ++++A+++
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 208/427 (48%), Gaps = 60/427 (14%)
Query: 11 IFNRLLRTHPTPSIIEFG-KILTSLVKMKHYPTAI--------------SLS-------- 47
IFN L+ + T + K+L +VK H P + SL+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 48 ---HQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGL 104
+M ++G++ N + S C C G+ AFSV+ +++ +G+ PDT T++ ++ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 105 CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGF 164
C ++++ A +++ G D +Y+I+ F + + +++A ++ +++ G
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL----IEQARKWFNEMREVGC 549
Query: 165 RLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
+ V+Y+ LI+ K + A +L + + P++V Y+ +ID CK V A
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 225 LYSEMVSKRILP----------------NVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
++ M + +P NV TY AL+ GFC +++EA +LLD M +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI--------------VGQLKEAT 314
+P+ ++ L+DGLCK GK+ A+ V M +GF V + A+
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
++L +M+ + P+ ++ ++DGLCK GK A ++ +M ++G +PNVVTY +++DG
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 375 CLVSEVN 381
++ ++
Sbjct: 790 GMIGKIE 796
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 190/404 (47%), Gaps = 38/404 (9%)
Query: 12 FNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH 71
FN + TP+++ + ++ + +K K A L M S G + N+VT S LI+ +C
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 72 LGQIPFAFSVLAKILK-----------KGY-----QPDTITFTTLIKGLCLNAQVQRALQ 115
GQ+ A + ++ K Y +P+ +T+ L+ G C + +V+ A +
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
D + +G +Q+ Y L + + A + ++ GF +YS LI
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCK----VGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
+ K+ + A ++L K+ P+VV+YT +ID LCK +A+ L M K
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
PNV TYTA+I GF ++G+++ ELL+ M +K + P+ T+ +L+D CK G + A N+
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 296 LGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
L M +I GF + E+ LLDE+ + P + +L+D L K
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 342 EGKVKGAKNVLG--VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+++ A +L + TYNSL++ CL ++V A
Sbjct: 895 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 183/389 (47%), Gaps = 35/389 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY----CHLGQIPF 77
PS + ++ + +K +A SL H+ S ++N+ + C+ C +G+
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSA-SLIHREMS---LANLRMDGFTLRCFAYSLCKVGKWRE 288
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +++ + + PDT+ +T LI GLC + + A+ F + + A + V+YS L
Sbjct: 289 ALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
++ + R + + ++ +G ++ L++ C G A +LL+K+
Sbjct: 346 G----CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 198 LVQPDVVMYTTIIDSLC--KDKLVTDAFNL----YSEMVSKRILPNVFTYTALIYGFCIV 251
P V+Y +I S+C KD L D +L YSEM++ ++ N ++ C
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------------ 299
G+ ++A ++ EM+ + PD T++ +++ LC K++ A + M
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 300 --MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
M+ FC G +++A + +EM P+ T++ L+ K KV A + M+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 358 QGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+G PN+VTY++L+DGHC +V KA I
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 155/380 (40%), Gaps = 64/380 (16%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
++L+ +C G A L ++ ++P T+ LI+ ++ A H ++
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 123 QGFRLDQVSYSILTLK-FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
R+D TL+ F+ + + AL V + F D V Y+ LI+GLC+
Sbjct: 264 ANLRMDG-----FTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEA 315
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ A+ L ++ P+VV Y+T++ K + + + M+ + P+ +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE--------------- 286
+L++ +C G A +LL +MV P +NIL+ +C +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 287 -GKVKGAKNVLGVMMIYGF----CIVGQLKEATELLDEMVTKNIDPDA------------ 329
++ A VL + + F C G+ ++A ++ EM+ + PD
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 330 -----------------------YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
YT++I+VD CK G ++ A+ M + G PNVVT
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
Y +L+ + +V+ A ++
Sbjct: 556 YTALIHAYLKAKKVSYANEL 575
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA + +++L P+++ + +++ L K+ A L ME G N+VT + +I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ + +G+I +L ++ KG P+ +T+ LI C N + A +++ +
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
Y + F++ I +L D++ Y +LI+ L K + +
Sbjct: 847 THTAGYRKVIEGFNKEFI------ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 187 ALQLLRKI---EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
AL+LL ++ LV Y ++I+SLC V AF L+SEM K ++P + ++ +
Sbjct: 901 ALRLLEEVATFSATLVDYSST-YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCS 959
Query: 244 LIYGFCIVGQLKEATELLD 262
LI G ++ EA LLD
Sbjct: 960 LIKGLFRNSKISEALLLLD 978
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 39/306 (12%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ I + ++ L K+ A + +M G + + T S LI+ Y + + A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L+K+L+ P+ + +T +I GLC + A + + +G + + V+Y+ + F
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG- 790
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK-------- 193
+I ++ L+ + + ++G + V+Y +LI+ CK G A LL +
Sbjct: 791 -MIGK--IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 194 --------IEG-------------KLVQPDVV----MYTTIIDSLCKDKLVTDAFNLYSE 228
IEG ++ Q D +Y +ID+L K + + A L E
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 229 MV--SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
+ S ++ TY +LI C+ +++ A +L EM K + P+ +F L+ GL +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 287 GKVKGA 292
K+ A
Sbjct: 968 SKISEA 973
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G++ Y+ L++ + + K + L++I D ++ ++ L + +
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIR----DDDKEVFGEFLNVLVRKHCRNGS 215
Query: 223 FNLYSEMVSK----RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
F++ E + + R P+ TY LI F +L A+ + EM N+ D +T
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 279 LVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
LCK VG+ +EA L++ T+N PD ++ L+ G
Sbjct: 276 FAYSLCK---------------------VGKWREALTLVE---TENFVPDTVFYTKLISG 311
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
LC+ + A + L M PNVVTY++L+ G CL
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CL 348
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 198/390 (50%), Gaps = 18/390 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+FNR+ PS+ + ++ L K K A L +M + ++ +++T + LI+ YC
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G +F V ++ +P ITF TL+KGL V+ A ++ GF D
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
++SIL +S S + AL ++ V G +++ + SIL+N LCK G+ + A ++
Sbjct: 321 TFSILFDGYS----SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
L + K + P+ V+Y T+ID C+ + A M + + P+ Y LI FC
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------- 299
+G+++ A + +++M K + P T+NIL+ G ++ + ++L M
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
+I C +L EA + +M + + P +++L+DG C +GK++ A M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 357 KQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K+G++ N+VTYN+L+DG + ++++A+D+
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
+++ FR + Y I K+ L+L +++ + P V +Y +ID LCK K
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+ DA L+ EM+++R+LP++ TY LI G+C G +++ ++ + M +I+P TFN
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 278 ILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTK 323
L+ GL K G V+ A+NVL M + G+ + + A + + V
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+ +AYT SIL++ LCKEGK++ A+ +LG M +G+ PN V YN+++DG+C
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 186/438 (42%), Gaps = 76/438 (17%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P F + + A+ + SG+ N T SIL+N C G+I A +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + + KG P+ + + T+I G C + A + + QG + D ++Y+ L +F
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 142 ----------------RVISPT---------PVQRALQFHD--DVVAQ----GFRLDQVS 170
+ +SP+ R +F D++ + G + VS
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
Y LIN LCK + A + R +E + V P V +Y +ID C + DAF EM+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG-------- 282
K I N+ TY LI G + G+L EA +LL E+ K + PD +T+N L+ G
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 283 --------------------------LCKEGKVKGAKNVLGVM-----------MIYGFC 305
LC + ++ + + G M +++ +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
+ G +++A L +M+ K+I D T++ L+ G K GK+ ++++ M + ++P
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 366 TYNSLMDGHCLVSEVNKA 383
TYN ++ GHC V + A
Sbjct: 737 TYNIIVKGHCEVKDYMSA 754
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 183/388 (47%), Gaps = 31/388 (7%)
Query: 21 TPSII-EFGKILTS--LVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
+PS+ +F +L S L + K A L + + GI + + ++L++ Q
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF-----HDDVVAQGFRLDQVSY 132
+V IL+ ++P + I+ + V + L+ HD + F Y
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVF-----IY 217
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
++L + + A Q D+++A+ ++Y+ LI+G CK G + + ++
Sbjct: 218 NVLIDGLCK----GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
+++ ++P ++ + T++ L K +V DA N+ EM +P+ FT++ L G+
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV-------------- 298
+ + A + + V + +AYT +IL++ LCKEGK++ A+ +LG
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
MI G+C G L A ++ M + + PD ++ L+ C+ G+++ A+ + M +
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
GV P+V TYN L+ G+ E +K DI
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDI 481
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 165/335 (49%), Gaps = 31/335 (9%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+++ +G ++ L K A + ME G+ + ++LI+ C G+I AF
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++LKKG + + +T+ TLI GL + ++ A ++ +G + D +Y+ L +
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG- 610
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL-VQ 200
VQR + ++++ G + +Y +LI+ LC TK ++L ++ G++ ++
Sbjct: 611 ---FAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC----TKEGIELTERLFGEMSLK 662
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+++Y ++ + AFNL +M+ K I + TY +LI G VG+L E L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
+DEM + ++P+A T+NI+V G C+ K+ + + Y +++E LLD
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCE------VKDYMSAYVWY-----REMQEKGFLLDVC 771
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
+ LV GL +E + K A+ V+ M
Sbjct: 772 IGNE----------LVSGLKEEWRSKEAEIVISEM 796
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 201/429 (46%), Gaps = 61/429 (14%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F++ L ++ F + VK TA + +M GI N+VT +ILI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G+I AF + +ILK+G +P +T+++LI G C ++ ++D++ G+ D V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y +L S++ + + A++F ++ Q RL+ V ++ LI+G C++ + AL++
Sbjct: 463 IYGVLVDGLSKQGL----MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 191 LRKIEGKLVQPDVVMYTTII------DSLCKD---------------------------- 216
R + ++PDV +TT++ D+ CK
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 578
Query: 217 -------KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+ DA ++ ++ ++ P++ TY +I G+C + +L EA + + +
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------MIYGFCIVGQLKEATE----- 315
P+ T IL+ LCK + GA + +M + YG C++ ++ +
Sbjct: 639 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG-CLMDWFSKSVDIEGSF 697
Query: 316 -LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
L +EM K I P ++SI++DGLCK G+V A N+ + + P+VV Y L+ G+
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 375 CLVSEVNKA 383
C V + +A
Sbjct: 758 CKVGRLVEA 766
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 194/431 (45%), Gaps = 61/431 (14%)
Query: 12 FNRLLRTHPTPS-IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
F++L R PS + G +L +L A+ + G +V+ + ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ QI A +L+ +L G P+ +TF TLI G C ++ RA + +G D +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+YS L + + + + + + +G +LD V +S I+ K G A +
Sbjct: 323 AYSTLIDGYFKAGM----LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ + + P+VV YT +I LC+D + +AF +Y +++ + + P++ TY++LI GFC
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG----------KVKGAKNVLGVM- 299
G L+ L ++M+ PD + +LVDGL K+G K+ G L V+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF------SILVDGLCKEGK------ 344
+I G+C + + EA ++ M I PD TF SI+ D CK K
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 345 -----------------------------VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
++ A +++ ++P++VTYN+++ G+C
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 376 LVSEVNKAKDI 386
+ +++A+ I
Sbjct: 619 SLRRLDEAERI 629
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 174/423 (41%), Gaps = 59/423 (13%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+ +A + + +L P P+++ F ++ K A L ME GI +++ S
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ Y G + + ++ L KG + D + F++ I + + A + ++ QG
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ V+Y+IL + + + A + ++ +G V+YS LI+G CK G
Sbjct: 387 ISPNVVTYTILI----KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ L + PDVV+Y ++D L K L+ A +M+ + I NV + +L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTF------NILVDGLCKEGKVKGAKNVLGV 298
I G+C + + EA ++ M I PD TF +I+ D CK K + +
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 299 M-------------------------------------------------MIYGFCIVGQ 309
M MI G+C + +
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
L EA + + + P+ T +IL+ LCK + GA + +M ++G KPN VTY
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 370 LMD 372
LMD
Sbjct: 683 LMD 685
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 164/366 (44%), Gaps = 33/366 (9%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
LR ++ +++ P ++ +G ++ L K A+ S +M I N+V +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK------GLCLNAQVQRALQFHD 118
LI+ +C L + A V + G +PD TFTT+++ C + + LQ D
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 119 DVVAQGFRLD-QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
+ D V ++ L F I + A +F ++++ D V+Y+ +I G
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRI-----EDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
C + + A ++ ++ P+ V T +I LCK+ + A ++S M K PN
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
TY L+ F ++ + +L +EM K I P +++I++DGLCK G+V
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV-------- 728
Query: 298 VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
EAT + + + + PD ++IL+ G CK G++ A + M++
Sbjct: 729 -------------DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 775
Query: 358 QGVKPN 363
GVKP+
Sbjct: 776 NGVKPD 781
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + R + I ++ L K A + + + ++VT + +I YC
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
L ++ A + + + P+T+T T LI LC N + A++ + +G + + V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y L FS+ V ++ + + +++ +G VSYSI+I+GLCK G+ A +
Sbjct: 679 TYGCLMDWFSKSV----DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 191 LRK-IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ I+ KL+ PDVV Y +I CK + +A LY M+ + P+ AL
Sbjct: 735 FHQAIDAKLL-PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 59/123 (47%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+ + P+ + +G ++ K + L +M+ GI ++V+ SI+I+
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G++ A ++ + + PD + + LI+G C ++ A ++ ++ G +
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 128 DQV 130
D +
Sbjct: 781 DDL 783
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 181/367 (49%), Gaps = 28/367 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + + R ++ F ++ L K A ME GI +VT + L+
Sbjct: 209 AWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQ 268
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G+I A +++++ KG+QPD T+ ++ +C + L+ ++ G
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVP 325
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D VSY+IL R + ++ A + D++V QG +Y+ LI+GL + + A
Sbjct: 326 DSVSYNILI----RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L+R+I K + D V Y +I+ C+ AF L+ EM++ I P FTYT+LIY
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C + +EA EL +++V K + PD N L+DG C +
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG---------------------HCAI 480
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G + A LL EM +I+PD T++ L+ GLC EGK + A+ ++G M ++G+KP+ ++Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 368 NSLMDGH 374
N+L+ G+
Sbjct: 541 NTLISGY 547
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 48 HQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLN 107
+M+ G++ + V+ +ILI + G + AF+ +++K+G P T+ TLI GL +
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 108 AQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD 167
+++ A ++ +G LD V+Y+IL + + ++A HD+++ G +
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQH----GDAKKAFALHDEMMTDGIQPT 431
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
Q +Y+ LI LC+ +T+ A +L K+ GK ++PD+VM T++D C + AF+L
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
EM I P+ TY L+ G C G+ +EA EL+ EM + I PD ++N L+ G K+G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 288 KVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
K A V DEM++ +P T++ L+ GL K + +
Sbjct: 552 DTKHAFMV---------------------RDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDG 373
A+ +L M +G+ PN ++ S+++
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 184/376 (48%), Gaps = 31/376 (8%)
Query: 11 IFNRLLRTH---PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
+F+ L+ H T S I F ++ +++ AI + M+ G T + ++
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
L +I A+ A + + + + TF +I LC ++++A F + G +
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
V+Y+ L FS R ++ A ++ ++GF+ D +Y+ +++ +C G+ A
Sbjct: 259 TIVTYNTLVQGFSLR----GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---A 311
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++LR+++ + PD V Y +I + + AF EMV + ++P +TY LI+G
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
+ +++ A L+ E+ K I D+ T+NIL++G C+ G K
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK----------------- 414
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+A L DEM+T I P +T++ L+ LC++ K + A + ++ +G+KP++V
Sbjct: 415 ----KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 368 NSLMDGHCLVSEVNKA 383
N+LMDGHC + +++A
Sbjct: 471 NTLMDGHCAIGNMDRA 486
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L +A + +++ P+ + ++ L A L ++ GI+ + VT +I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN YC G AF++ +++ G QP T+T+LI LC + + A + + VV +G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ D V + TL I + RA ++ D V+Y+ L+ GLC G+
Sbjct: 463 MKPDLVMMN--TLMDGHCAIGN--MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ A +L+ +++ + ++PD + Y T+I K AF + EM+S P + TY AL
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
+ G + + A ELL EM ++ I P+ +F +++ +
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+RLD + + I + K+ KP QLL+++ ++ ++ L D+L T +
Sbjct: 98 YRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELV--LAHDRLETKST 155
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
L+ L+ C + + EA E M K P T N ++ L
Sbjct: 156 ILFD---------------LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLL 200
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
+ +++ A + Y +M I + YTF+I+++ LCKEG
Sbjct: 201 SRLNRIENA------WVFYA---------------DMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
K+K AK LG+M G+KP +VTYN+L+ G L + A+
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 197/392 (50%), Gaps = 34/392 (8%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A+ +RL ++ P K + L+ ++ + S G + + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA-LQFHDDVVAQ 123
+++ C LGQ+ FA ++ + + G +PD I++ +LI G C N ++ A L +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 124 GF--RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV-VAQGFRL-----DQVSYSILI 175
GF + D VS++ L FS+ ++ D+V V G L + V+YS I
Sbjct: 122 GFICKPDIVSFNSLFNGFSK-----------MKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
+ CK G+ + AL+ ++ + P+VV +T +ID CK + A +LY EM R+
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
NV TYTALI GFC G+++ A E+ MV ++P++ + ++DG + G A
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 296 LGVMM--------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
L M+ I G C G+LKEATE++++M ++ PD F+ +++ K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
G++K A N+ ++++G +P+VV ++++DG
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 5 LRLAVFIFNRLLRTHP---TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+R A + L +H P I+ F + KMK M N+VT
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVT 165
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
S I+ +C G++ A + + P+ +TFT LI G C ++ A+ + ++
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
L+ V+Y+ L F ++ +QRA + + +V + + Y+ +I+G +
Sbjct: 226 RVRMSLNVVTYTALIDGFCKK----GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G + A++ L K+ + ++ D+ Y II LC + + +A + +M ++P++ +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK---------VKGA 292
T ++ + G++K A + +++ + +PD + ++DG+ K G+ ++ A
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 293 KNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+V+ ++I C G E L ++ + PD + ++ + GLCK+G + A +
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 353 GVMMKQGVKPNVVTYNSLMDG 373
M+++G+ +++ Y +L+ G
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYG 482
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 162/356 (45%), Gaps = 61/356 (17%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S L+LA+ F+ + R +P+++ F ++ K A+SL +M + N+VT
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ LI+ +C G++ A + +++++ +P+++ +TT+I G A++F ++
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 122 AQGFRLDQVSYSIL--------TLKFSRRVISPTP-----------------------VQ 150
QG RLD +Y ++ LK + ++ ++
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL---------------------- 188
A+ + ++ +GF D V+ S +I+G+ K GQ A+
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 189 --------QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+L KI + PD MYT+ I LCK + DAF L + MV + +L ++
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
YT LIYG G + EA ++ DEM+ I PD+ F++L+ KEG + A ++L
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 61/339 (17%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN C + + F LA ++ +GY P +F +++ +C
Sbjct: 31 LINSNCGILSLKF----LAYLVSRGYTPHRSSFNSVVSFVC------------------- 67
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+L QV KF+ ++ P +F G D +SY+ LI+G C+ G
Sbjct: 68 -KLGQV-------KFAEDIVHSMP-----RF-------GCEPDVISYNSLIDGHCRNGDI 107
Query: 185 KPA---LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ A L+ LR G + +PD+V + ++ + K K++ + F +Y ++ K PNV TY
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTY 166
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG-------------K 288
+ I FC G+L+ A + M + P+ TF L+DG CK G +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 289 VKGAKNVLG-VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
V+ + NV+ +I GFC G+++ A E+ MV ++P++ ++ ++DG + G
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A L M+ QG++ ++ Y ++ G C ++ +A +I
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 21/347 (6%)
Query: 55 IISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL 114
I + T ++L C G A + + G P+ L+ + L
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK----L 154
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSIL 174
F ++ Q F ++ + +L ++ V+ A++ D+ + D +++IL
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLL--NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI 234
I GLC +G+ + AL+LL + G +PD+V Y T+I CK + A ++ ++ S +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 235 L-PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
P+V TYT++I G+C G+++EA+ LLD+M+ I P TFN+LVDG K G++ A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 294 NVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+ G M +I G+C VGQ+ + L +EM + + P+A+T+SIL++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
C E ++ A+ +LG + + + P YN ++DG C +VN+A I
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 36/353 (10%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+L +LVK+ A+ L + ++ T +ILI C +G+ A +L + G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-RLDQVSYSILTLKFSRRVISPTP 148
+PD +T+ TLI+G C + ++ +A + DV + D V+Y+ + + +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK----AGK 292
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ----PDVV 204
++ A DD++ G V++++L++G K G+ A +I GK++ PDVV
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVV 348
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+T++ID C+ V+ F L+ EM ++ + PN FTY+ LI C +L +A ELL ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+K+I P + +N ++DG CK GKV EA +++EM K
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKV---------------------NEANVIVEEMEKKK 447
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
PD TF+IL+ G C +G++ A ++ M+ G P+ +T +SL+ CL+
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS--CLL 498
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIIS-NMVTSSILINCYCHLGQIPFAFS 80
P I+ + ++ K A + ++S + S ++VT + +I+ YC G++ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+L +L+ G P +TF L+ G ++ A + +++ G D V+++ L +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R V + + +++ A+G + +YSILIN LC + A +LL ++ K +
Sbjct: 359 R----VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P MY +ID CK V +A + EM K+ P+ T+T LI G C+ G++ EA +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+MV PD T + L+ L K G K A
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A + + +LR P+ + F ++ K TA + +M S G ++VT +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ YC +GQ+ F + ++ +G P+ T++ LI LC ++ +A + + ++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK- 411
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
D++ Q F Y+ +I+G CK G+
Sbjct: 412 ---------------------------------DIIPQPFM-----YNPVIDGFCKAGKV 433
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A ++ ++E K +PD + +T +I C + +A +++ +MV+ P+ T ++L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 245 IYGFCIVGQLKEATEL 260
+ G KEA L
Sbjct: 494 LSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 21/347 (6%)
Query: 55 IISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL 114
I + T ++L C G A + + G P+ L+ + L
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK----L 154
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSIL 174
F ++ Q F ++ + +L ++ V+ A++ D+ + D +++IL
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLL--NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI 234
I GLC +G+ + AL+LL + G +PD+V Y T+I CK + A ++ ++ S +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 235 L-PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
P+V TYT++I G+C G+++EA+ LLD+M+ I P TFN+LVDG K G++ A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 294 NVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+ G M +I G+C VGQ+ + L +EM + + P+A+T+SIL++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
C E ++ A+ +LG + + + P YN ++DG C +VN+A I
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 36/353 (10%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+L +LVK+ A+ L + ++ T +ILI C +G+ A +L + G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-RLDQVSYSILTLKFSRRVISPTP 148
+PD +T+ TLI+G C + ++ +A + DV + D V+Y+ + + +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK----AGK 292
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ----PDVV 204
++ A DD++ G V++++L++G K G+ A +I GK++ PDVV
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVV 348
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+T++ID C+ V+ F L+ EM ++ + PN FTY+ LI C +L +A ELL ++
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+K+I P + +N ++DG CK GKV EA +++EM K
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKV---------------------NEANVIVEEMEKKK 447
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
PD TF+IL+ G C +G++ A ++ M+ G P+ +T +SL+ CL+
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS--CLL 498
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIIS-NMVTSSILINCYCHLGQIPFAFS 80
P I+ + ++ K A + ++S + S ++VT + +I+ YC G++ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+L +L+ G P +TF L+ G ++ A + +++ G D V+++ L +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R V + + +++ A+G + +YSILIN LC + A +LL ++ K +
Sbjct: 359 R----VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P MY +ID CK V +A + EM K+ P+ T+T LI G C+ G++ EA +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+MV PD T + L+ L K G K A
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A + + +LR P+ + F ++ K TA + +M S G ++VT +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ YC +GQ+ F + ++ +G P+ T++ LI LC ++ +A + + ++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK- 411
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
D++ Q F Y+ +I+G CK G+
Sbjct: 412 ---------------------------------DIIPQPFM-----YNPVIDGFCKAGKV 433
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A ++ ++E K +PD + +T +I C + +A +++ +MV+ P+ T ++L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 245 IYGFCIVGQLKEATEL 260
+ G KEA L
Sbjct: 494 LSCLLKAGMAKEAYHL 509
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 196/428 (45%), Gaps = 55/428 (12%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
LR A+ + + R P+++ + V+ A+ +M+ GI+ N+VT +
Sbjct: 258 LRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNC 317
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ- 123
+I YC L ++ A +L + KG PD +++ T++ LC ++ + +
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G DQV+Y+ L ++ AL F D +GFR+D++ YS +++ LCK G+
Sbjct: 378 GLVPDQVTYNTLIHMLTKH----DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 184 TKPALQLLRKIEGK-LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
A L+ ++ K PDVV YT +++ C+ V A L M + PN +YT
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 243 ALIYGFCIVGQLKEATELLD-----------------------------------EMVTK 267
AL+ G C G+ EA E+++ EMV K
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAK-------------NVLG-VMMIYGFCIVGQLKEA 313
P N+L+ LC++G+ A+ NV+ +I+GFC +L A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+LD+M N D +T++ LVD L K+G++ A ++ M+ +G+ P VTY +++
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 374 HCLVSEVN 381
+C + +V+
Sbjct: 674 YCQMGKVD 681
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 194/374 (51%), Gaps = 22/374 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F +++ S + A+ + M+ +G+ N++ + I+ + ++ A L ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT--LKFSRRVI 144
G P+ +T+ +I+G C +V+ A++ +D+ ++G D+VSY + L +R++
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
+ + + G DQV+Y+ LI+ L K AL L+ + K + D +
Sbjct: 365 EVRDLMKKM-----AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDE 263
Y+ I+ +LCK+ +++A +L +EM+SK P+V TYTA++ GFC +G++ +A +LL
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV--------------MMIYGFCIVGQ 309
M T P+ ++ L++G+C+ GK A+ ++ + ++++G G+
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
L EA +++ EMV K P ++L+ LC++G+ A+ + + +G NVV + +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 370 LMDGHCLVSEVNKA 383
++ G C E++ A
Sbjct: 600 VIHGFCQNDELDAA 613
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 177/370 (47%), Gaps = 17/370 (4%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSG-IISNMVTSSILINCYCHLGQIPFAFSVLAKI 85
+ I+ +L K A L ++M S G ++VT + ++N +C LG++ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
G++P+T+++T L+ G+C + A + + + + ++YS++ R
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE--- 537
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
+ A ++V +GF V ++L+ LC+ G+T A + + + K +VV
Sbjct: 538 -GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+TT+I C++ + A ++ +M +VFTYT L+ G++ EATEL+ +M+
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM------------IYGFCIVGQLKEA 313
K IDP T+ ++ C+ GKV +L M+ I C++G+L+EA
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEA 716
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
LL +++ DA T L++G K+G A V M + + P+V L
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776
Query: 374 HCLVSEVNKA 383
L +V++A
Sbjct: 777 LVLKGKVDEA 786
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 178/368 (48%), Gaps = 21/368 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ L K H A+ + G + + S +++ C G++ A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 82 LAKILKKGY-QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ ++L KG+ PD +T+T ++ G C +V +A + + G + + VSY+ L
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R S A + + + + ++YS++++GL + G+ A ++R++ K
Sbjct: 501 RTGKS----LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P V ++ SLC+D +A E ++K NV +T +I+GFC +L A +
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCI 306
LD+M N D +T+ LVD L K+G++ A ++ M+ I+ +C
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+G++ + +L++M+++ Y + +++ LC GK++ A +LG +++ + + T
Sbjct: 677 MGKVDDLVAILEKMISRQKCRTIY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 734
Query: 367 YNSLMDGH 374
+LM+G+
Sbjct: 735 CYALMEGY 742
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 55/353 (15%)
Query: 50 MESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ 109
M+ GI S ++ Y GQ+ A VL + + G +P+ + T I
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTI-------- 284
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQV 169
DV + RL ++AL+F + + G + V
Sbjct: 285 ---------DVFVRANRL----------------------EKALRFLERMQVVGIVPNVV 313
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+Y+ +I G C + + + A++LL + K PD V Y TI+ LCK+K + + +L +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 230 VSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+ ++P+ TY LI+ EA L + K D ++ +V LCKEG+
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 289 VKGAKNVLGVMM---------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
+ AK+++ M+ + GFC +G++ +A +LL M T P+ +++
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
L++G+C+ GK A+ ++ + + PN +TY+ +M G ++++A D+
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 15/185 (8%)
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D ++Y ++++ L K KL + + M + I ++ ++ + GQL++A ++L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
M ++P+ N +D + +++ A L M MI G+C +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVT 366
+++EA ELL++M +K PD ++ ++ LCKE ++ ++++ M K+ G+ P+ VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 367 YNSLM 371
YN+L+
Sbjct: 386 YNTLI 390
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 10/278 (3%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P+ I + I+ L + A + +M G V ++L+ C G+ A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL--TLK 138
+ + L KG + + FTT+I G C N ++ AL DD+ D +Y+ L TL
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
R+ T + + + + +G V+Y +I+ C+MG+ + +L K+ +
Sbjct: 641 KKGRIAEATELMKKM------LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR- 693
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
Q +Y +I+ LC + +A L +++ + T AL+ G+ G A
Sbjct: 694 -QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 752
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
++ M +N+ PD L L +GKV A ++
Sbjct: 753 KVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLM 790
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 194/387 (50%), Gaps = 18/387 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ ++ + P + ++ + K+ L +M+ I+ + T ++ C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A++++ +++ G +P+ + +TTLIK N++ A++ ++ QG D
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+ L + S+ + A F ++V G + + +Y I+G + + A +
Sbjct: 489 CYNSLIIGLSK----AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++++ V P+ V+ T +I+ CK V +A + Y MV + IL + TYT L+ G
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------MI 301
++ +A E+ EM K I PD +++ +L++G K G ++ A ++ M +I
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 302 Y-----GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
Y GFC G++++A ELLDEM K + P+A T+ ++DG CK G + A + M
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 357 KQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+G+ P+ Y +L+DG C +++V +A
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 180/365 (49%), Gaps = 26/365 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A I ++ + P+++ + ++ + ++ + A+ + +M+ GI ++ + LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
++ A S L ++++ G +P+ T+ I G ++ A ++ ++ G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++V + L ++ ++ V A + +V QG D +Y++L+NGL K + A
Sbjct: 556 NKVLCTGLINEYCKK----GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ R++ GK + PDV Y +I+ K + A +++ EMV + + PNV Y L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC G++++A ELLDEM K + P+A T+ ++DG CK
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS--------------------- 710
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G L EA L DEM K + PD++ ++ LVDG C+ V+ A + G K+G + +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPF 769
Query: 368 NSLMD 372
N+L++
Sbjct: 770 NALIN 774
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 18/371 (4%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ L+K ++ A L H+M S GI I G + A ++ ++ G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
P + +LI+G C V++ + ++ + + +Y + + + S +
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV----KGMCSSGDL 433
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
A +++A G R + V Y+ LI + + A+++L++++ + + PD+ Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
I L K K + +A + EMV + PN FTY A I G+ + A + + EM +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 270 DPDAYTFNILVDGLCKEGKVKGA---------KNVLGVMMIYGFCIVGQLK-----EATE 315
P+ L++ CK+GKV A + +LG Y + G K +A E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+ EM K I PD +++ +L++G K G ++ A ++ M+++G+ PNV+ YN L+ G C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 376 LVSEVNKAKDI 386
E+ KAK++
Sbjct: 674 RSGEIEKAKEL 684
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 176/377 (46%), Gaps = 35/377 (9%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
IF + P + +G ++ K+ + A S+ +M G+ N++ ++L+ +C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G+I A +L ++ KG P+ +T+ T+I G C + + A + D++ +G D
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+ L R V+RA+ +G ++ LIN + K G+T+ ++
Sbjct: 734 VYTTLVDGCCRL----NDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 191 L-RKIEG---KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
L R ++G + +P+ V Y +ID LCK+ + A L+ +M + ++P V TYT+L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G+ +G+ E + DE + I+PD ++++++ KE
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE-------------------- 888
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSI-----LVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G +A L+D+M KN D SI L+ G K G+++ A+ V+ M++
Sbjct: 889 -GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 362 PNVVTYNSLMDGHCLVS 378
P+ T L++ C+ S
Sbjct: 948 PDSATVIELINESCISS 964
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 32/394 (8%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
++ AVF+F+ + P + +L +L++ + M ++ ++ T
Sbjct: 166 YIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYH 225
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+LI +C G + VL K +K ++ T+ V AL+ + ++ +
Sbjct: 226 MLIIAHCRAGNVQLGKDVLFKT-EKEFRTATL-------------NVDGALKLKESMICK 271
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + +Y +L + I ++L D + G LD +YS+LI+GL K
Sbjct: 272 GLVPLKYTYDVLIDGLCK--IKRLEDAKSLLVEMDSL--GVSLDNHTYSLLIDGLLKGRN 327
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
A L+ ++ + MY I + K+ ++ A L+ M++ ++P Y +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
LI G+C +++ ELL EM +NI YT+ +V G+C G + GA N++ M+ G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 304 --------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
F + +A +L EM + I PD + ++ L+ GL K ++ A+
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ L M++ G+KPN TY + + G+ SE A
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 204/458 (44%), Gaps = 90/458 (19%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F++ L ++ F + VK TA + +M GI N+VT +ILI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G+I AF + +ILK+G +P +T+++LI G C ++ ++D++ G+ D V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y +L S++ + + A++F ++ Q RL+ V ++ LI+G C++ + AL++
Sbjct: 463 IYGVLVDGLSKQGL----MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 191 LRK---------------------IEGKL--------------VQPDVVMYTTIIDSLCK 215
R +EG+L ++PD + Y T+ID+ CK
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 216 D-----------------------------------KLVTDAFNLYSEMVSKRILPNVFT 240
+ DA ++ ++ ++ P++ T
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM- 299
Y +I G+C + +L EA + + + P+ T IL+ LCK + GA + +M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 300 --------MIYGFCIVGQLKEATE------LLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
+ YG C++ ++ + L +EM K I P ++SI++DGLCK G+V
Sbjct: 699 EKGSKPNAVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
A N+ + + P+VV Y L+ G+C V + +A
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 183/379 (48%), Gaps = 20/379 (5%)
Query: 12 FNRLLRTHPTPS-IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
F++L R PS + G +L +L A+ + G +V+ + ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ QI A +L+ +L G P+ +TF TLI G C ++ RA + +G D +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+YS L + + + + + + +G +LD V +S I+ K G A +
Sbjct: 323 AYSTLIDGYFKAGM----LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ + + P+VV YT +I LC+D + +AF +Y +++ + + P++ TY++LI GFC
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG----------KVKGAKNVLGVM- 299
G L+ L ++M+ PD + +LVDGL K+G K+ G L V+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
+I G+C + + EA ++ M I PD TF+ ++ EG+++ A + M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 357 KQGVKPNVVTYNSLMDGHC 375
K G++P+ + Y +L+D C
Sbjct: 559 KMGLEPDALAYCTLIDAFC 577
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 174/400 (43%), Gaps = 53/400 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P +I + ++ K L Q G+ ++V S I+ Y G + A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++L +G P+ +T+T LIKGLC + ++ A + ++ +G V+YS L F +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ ++D++ G+ D V Y +L++GL K G A++ K+ G+ ++
Sbjct: 439 ----CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+VV++ ++ID C+ +A ++ M I P+V T+T ++ + G+L+EA L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------------- 299
M ++PDA + L+D CK K + +M
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 300 ---------------------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
MI G+C + +L EA + + + P+ T
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+IL+ LCK + GA + +M ++G KPN VTY LMD
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 169/391 (43%), Gaps = 54/391 (13%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
LR ++ +++ P ++ +G ++ L K A+ S +M I N+V +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ +C L + A V + G +PD TFTT+++ + +++ AL + G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 125 FRLDQVSYSILTLKFSRRVISPT--------------------------------PVQRA 152
D ++Y L F + + PT ++ A
Sbjct: 562 LEPDALAYCTLIDAFCKH-MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
+F ++++ D V+Y+ +I G C + + A ++ ++ P+ V T +I
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
LCK+ + A ++S M K PN TY L+ F ++ + +L +EM K I P
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
+++I++DGLCK G+V EAT + + + + PD +
Sbjct: 741 IVSYSIIIDGLCKRGRVD---------------------EATNIFHQAIDAKLLPDVVAY 779
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
+IL+ G CK G++ A + M++ GVKP+
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 131/272 (48%), Gaps = 4/272 (1%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
M L A+F+F R+ + P + + ++ + K + L M+ + I +++
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
+++I+ +I A +++ +PD +T+ T+I G C ++ A + + +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
F + V+ +IL + + A++ + +G + + V+Y L++ K
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKN----NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+ + +L +++ K + P +V Y+ IID LCK V +A N++ + + ++LP+V
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
Y LI G+C VG+L EA L + M+ + PD
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + R + I ++ L K A + + + ++VT + +I YC
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
L ++ A + + + P+T+T T LI LC N + A++ + +G + + V
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y L FS+ V ++ + + +++ +G VSYSI+I+GLCK G+ A +
Sbjct: 708 TYGCLMDWFSKSV----DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 191 LRK-IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ I+ KL+ PDVV Y +I CK + +A LY M+ + P+ AL
Sbjct: 764 FHQAIDAKLL-PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 59/123 (47%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+ + P+ + +G ++ K + L +M+ GI ++V+ SI+I+
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G++ A ++ + + PD + + LI+G C ++ A ++ ++ G +
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 128 DQV 130
D +
Sbjct: 810 DDL 812
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 203/425 (47%), Gaps = 49/425 (11%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
SS + A +F+ + P+ FG ++ K + L + MES G++ N V
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ +++ +C G+ + ++ K+ ++G PD +TF + I LC +V A + D+
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 122 AQGF----RLDQVSYSILTLKFSRRVI--SPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
+ R + ++Y+++ F + + + +++ +DD+ + SY+I +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS------LQSYNIWL 333
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
GL + G+ A +L+++ K + P + Y ++D LCK +++DA + M +
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
P+ TY L++G+C VG++ A LL EM+ N P+AYT NIL+ L K G++ A+ +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 296 LGVM--------------MIYGFCIVGQLKEATELL-----------------------D 318
L M ++ G C G+L +A E++ D
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
++ N PD T+S L++GLCK G+ AKN+ MM + ++P+ V YN + C
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 379 EVNKA 383
+++ A
Sbjct: 574 KISSA 578
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 158/302 (52%), Gaps = 29/302 (9%)
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G P T TF LI+ LC ++ V A + D++ +G + ++ ++ IL + + ++
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT--- 198
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+ L+ + + + G ++V Y+ +++ C+ G+ + +++ K+ + + PD+V + +
Sbjct: 199 -DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRIL----PNVFTYTALIYGFCIVGQLKEATELLDEM 264
I +LCK+ V DA ++S+M L PN TY ++ GFC VG L++A L + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+ ++NI + GL + GK EA +L +M K
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGK---------------------FIEAETVLKQMTDKG 356
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
I P Y+++IL+DGLCK G + AK ++G+M + GV P+ VTY L+ G+C V +V+ AK
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 385 DI 386
+
Sbjct: 417 SL 418
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 37/325 (11%)
Query: 17 RTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP 76
R P + +G +L + A SL +M + + N T +IL++ +G+I
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
A +L K+ +KGY DT+T ++ GLC + ++ +A++ + +G R+ S ++
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE-----IVKGMRV-HGSAALGN 502
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
L S + D ++ D ++YS L+NGLCK G+ A L ++ G
Sbjct: 503 LGNSYIGL----------VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
+ +QPD V Y I CK ++ AF + +M K ++ TY +LI G I Q+ E
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATEL 316
L+DEM K I P+ T+N + LC+ KV ++AT L
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV---------------------EDATNL 651
Query: 317 LDEMVTKNIDPDAYTFSILVDGLCK 341
LDEM+ KNI P+ ++F L++ CK
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 168/369 (45%), Gaps = 29/369 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS+ + +L S +K + L M GI T ++LI C + A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ +KG +P+ TF L++G C + L+ + + + G ++V Y+ + F R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK---- 197
+ + + + +G D V+++ I+ LCK G+ A ++ +E
Sbjct: 230 EGRNDDSEKMVEKMRE----EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
L +P+ + Y ++ CK L+ DA L+ + L ++ +Y + G G+ EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELL 317
+L +M K I P Y++NIL+DGLCK G + AK ++G+M G C
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC------------ 393
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
PDA T+ L+ G C GKV AK++L MM+ PN T N L+ +
Sbjct: 394 ---------PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 378 SEVNKAKDI 386
+++A+++
Sbjct: 445 GRISEAEEL 453
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 164/401 (40%), Gaps = 83/401 (20%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + ++R + P+ +L SL KM A L +M G + VT +I+++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQ-----------------------PDTITFTTLIKGL 104
C G++ A ++ + G PD IT++TL+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 105 CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGF 164
C + A +++ + + D V+Y+I F ++ + A + D+ +G
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ----GKISSAFRVLKDMEKKGC 590
Query: 165 RLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
+Y+ LI GL Q L+ +++ K + P++ Y T I LC+ + V DA N
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIV--------------------------------- 251
L EM+ K I PNVF++ LI FC V
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA 710
Query: 252 -GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI---- 306
GQL +ATELL+ ++ + + + + LV+ LCK+ +++ A +L M+ G+
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA 770
Query: 307 ----------VGQLKEATELLDEM--------VTKNIDPDA 329
+G KEA D+M V +DP+A
Sbjct: 771 LMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 20/380 (5%)
Query: 11 IFNRLLRTHPT--PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
+F+ L T P F + + L+ + AI +M+ + + + L++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
+ LG+ ++ G +P T+ +I +C V+ A +++ +G D
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 129 QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
V+Y+ + F + + + F +++ D ++Y+ LIN CK G+ L
Sbjct: 297 TVTYNSMIDGFGK----VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+ R+++G ++P+VV Y+T++D+ CK+ ++ A Y +M ++PN +TYT+LI
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------- 299
C +G L +A L +EM+ ++ + T+ L+DGLC ++K A+ + G M
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 300 -----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
+I+GF + A ELL+E+ + I PD + + GLC K++ AK V+
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 355 MMKQGVKPNVVTYNSLMDGH 374
M + G+K N + Y +LMD +
Sbjct: 533 MKECGIKANSLIYTTLMDAY 552
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 19/378 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P +I + ++ K P + +M+ +G+ N+V+ S L++ +C G + A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ + G P+ T+T+LI C + A + ++++ G + V+Y+ L
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI----D 445
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ ++ A + + G + SY+ LI+G K AL+LL +++G+ ++P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D+++Y T I LC + + A + +EM I N YT L+ + G E LL
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGA-------KNVLGVM--------MIYGFCI 306
DEM +I+ TF +L+DGLCK V A N G+ MI G C
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
Q++ AT L ++MV K + PD ++ L+DG K+G V A + M + G+K +++
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 367 YNSLMDGHCLVSEVNKAK 384
Y SL+ G +++ KA+
Sbjct: 686 YTSLVWGLSHCNQLQKAR 703
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 14/247 (5%)
Query: 154 QFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
+F D++ G R +Y+I+I+ +CK G + A L +++ + + PD V Y ++ID
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 214 CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
K + D + EM P+V TY ALI FC G+L E EM + P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLKEATELLDE 319
+++ LVD CKEG ++ A M G C +G L +A L +E
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
M+ ++ + T++ L+DGLC ++K A+ + G M GV PN+ +YN+L+ G
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 380 VNKAKDI 386
+++A ++
Sbjct: 488 MDRALEL 494
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 159/357 (44%), Gaps = 54/357 (15%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+++ + ++ + K AI M G++ N T + LI+ C +G + AF +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++L+ G + + +T+T LI GLC +++ A + + G + SY+ L F
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF-- 482
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC---------------------- 179
+ + RAL+ +++ +G + D + Y I GLC
Sbjct: 483 --VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 180 -------------KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
K G L LL +++ ++ VV + +ID LCK+KLV+ A + +
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 227 SEMVSKRIL-PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
+ + + L N +TA+I G C Q++ AT L ++MV K + PD + L+DG K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 286 EGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPD 328
+G V A + M +++G QL++A L+EM+ + I PD
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 126/268 (47%), Gaps = 3/268 (1%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
++ A +F ++ P++ + ++ VK K+ A+ L ++++ GI +++
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
I C L +I A V+ ++ + G + +++ +TTL+ + L D++
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ V++ +L + + V + +D G + + ++ +I+GLCK Q
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTAMIDGLCKDNQV 629
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ A L ++ K + PD YT+++D K V +A L +M + ++ YT+L
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPD 272
++G QL++A L+EM+ + I PD
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 41 PT-AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK-GYQPDTITFT 98
PT + L +M+ I +VT +LI+ C + A +I G Q + FT
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 99 TLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHD 157
+I GLC + QV+ A + +V +G D+ +Y S++ F + V AL D
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ-----GNVLEALALRD 672
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
+ G +LD ++Y+ L+ GL Q + A L ++ G+ + PD V+ +++ +
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
Query: 218 LVTDAFNLYSEMVSKRIL 235
+ +A L S ++ ++L
Sbjct: 733 CIDEAVELQSYLMKHQLL 750
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 190/377 (50%), Gaps = 28/377 (7%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
I+++++ +P + ++ S K+ AISL + + I + VT + +I+
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGL 171
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G A+ L++++K G PDT+++ TLI G C RA D++ L+
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNL 227
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
++++IL + + + + D+V GF D V++S +IN LCK G+
Sbjct: 228 ITHTILLSSYYN-------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
LLR++E V P+ V YTT++DSL K + A LYS+MV + I ++ YT L+ G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------- 299
G L+EA + ++ N P+ T+ LVDGLCK G + A+ ++ M
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 300 ----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
MI G+ G L+EA LL +M +N+ P+ +T+ ++DGL K GK + A + M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 356 MKQGVKPNVVTYNSLMD 372
GV+ N ++L++
Sbjct: 461 RLIGVEENNYILDALVN 477
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 185/366 (50%), Gaps = 25/366 (6%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ K+ ++ A +L ++ N++T +IL++ Y +L I A+
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEAYR- 248
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ G+ PD +TF+++I LC +V ++ + V+Y+ L +
Sbjct: 249 --DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
I + AL + +V +G +D V Y++L++GL K G + A + + + P
Sbjct: 307 ANI----YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+VV YT ++D LCK ++ A + ++M+ K ++PNV TY+++I G+ G L+EA LL
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIV 307
+M +N+ P+ +T+ ++DGL K GK + A + M + G +
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRI 482
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G++KE L+ +MV+K + D ++ L+D K G + A M ++G+ +VV+Y
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY 542
Query: 368 NSLMDG 373
N L+ G
Sbjct: 543 NVLISG 548
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 31/329 (9%)
Query: 50 MESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ 109
M GI ++ T +I++N G + K+ G +P ++ ++ LC N +
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA---LQFHDDVVAQGFRL 166
++ A+ + ++ + +Y I S+ +RA + H+ +++ G +L
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH-------KRADAIFKTHETLLSYGIKL 676
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
+ Y+ LI LCK+G TK A ++ +E + PD V + +++ V A + Y
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
S M+ I PNV TY +I G G +KE + L EM ++ + PD +T+N L+ G K
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
G +KG+ M IY C EM+ + P T+++L+ GK+
Sbjct: 797 GNMKGS------MTIY--C-------------EMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
A+ +L M K+GV PN TY +++ G C
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 190/430 (44%), Gaps = 57/430 (13%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
LR A F LL + P+++ + ++ L K +A + QM +I N+VT S
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH------- 117
+IN Y G + A S+L K+ + P+ T+ T+I GL + + A++
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 118 ----------------------------DDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
D+V++G LDQ++Y+ L F + +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
A + + +G D VSY++LI+G+ K G+ A + + K ++PD+ + +
Sbjct: 525 AWAEEMQE----RGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
++S K L+ +M S I P++ + ++ C G+++EA +L++M+ I
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATE 315
P+ T+ I +D K + ++ YG C +G K+A
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG-- 373
++ +M + PD TF+ L+ G V+ A + VMM+ G+ PNV TYN+++ G
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 374 -HCLVSEVNK 382
L+ EV+K
Sbjct: 760 DAGLIKEVDK 769
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 45/273 (16%)
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
+ ++A G D + ++LI+ CK+G+ A+ LLR +++ D V Y T+I LC+
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCE 173
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE------------ 263
L +A+ SEMV ILP+ +Y LI GFC VG A L+DE
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 264 ----------------MVTKNIDPDAYTFNILVDGLCKEGKV-KGA-------------K 293
MV DPD TF+ +++ LCK GKV +G
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+V ++ + A L +MV + I D +++L+DGL K G ++ A+
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++++ PNVVTY +L+DG C +++ A+ I
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 187/426 (43%), Gaps = 44/426 (10%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L AV + ++ + P+ +G ++ L K AI LS +M G+ N
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+N +G+I ++ ++ KG D I +T+LI + AL + +++ +G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 125 FRLDQVSYSIL---TLKFSR------------RVISPTPV--------QRA-------LQ 154
D VSY++L LKF + + I P QR L+
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
D + + G + +S +I++ LC+ G+ + A+ +L ++ + P++ Y +D+
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
K K F + ++S I + Y LI C +G K+A ++ +M + PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 275 TFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEM 320
TFN L+ G V+ A + VMM I G G +KE + L EM
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
++ + PD +T++ L+ G K G +KG+ + M+ G+ P TYN L+ V ++
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834
Query: 381 NKAKDI 386
+A+++
Sbjct: 835 LQAREL 840
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 19/365 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + + ++ SL K Y A++L QM GI ++V ++L++ G + A
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+L+ P+ +T+T L+ GLC + A ++ + + V+YS + + +
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 142 RVISPTPVQRALQFHD-DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ + V + D +VV GF +Y +I+GL K G+ + A++L +++ V+
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGF-----TYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+ + +++ L + + + L +MVSK + + YT+LI F G + A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKV------KG--AKNVLGVMMIYGFCIVGQLKE 312
+EM + + D ++N+L+ G+ K GKV KG K + + + + Q K+
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 313 AT-----ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+L D+M + I P + +I+V LC+ GK++ A ++L MM + PN+ TY
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 368 NSLMD 372
+D
Sbjct: 647 RIFLD 651
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ I N+++ P++ + L + K K + S GI + + LI
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C LG A V+ + +G+ PDT+TF +L+ G + + V++AL + ++ G
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG--- 743
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
ISP + +Y+ +I GL G K
Sbjct: 744 ----------------ISP--------------------NVATYNTIIRGLSDAGLIKEV 767
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L +++ + ++PD Y +I K + + +Y EM++ ++P TY LI
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
F VG++ +A ELL EM + + P+ T+ ++ GLCK
Sbjct: 828 FANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 194/380 (51%), Gaps = 20/380 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + + ++ K+ A + M+ + ++ ++ T +ILIN C+ G + +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQ-RALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ + QPD +T+ TLI G C + A + + + G + +QV+++I +LK+
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNI-SLKWL 390
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ V R ++ + V GF D V+Y LI K+G AL+++R++ K ++
Sbjct: 391 CKEEKREAVTRKVK--ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+ + TI+D+LCK++ + +A NL + + + + TY LI GF ++++A E+
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
DEM I P TFN L+ GLC GK + A + +I G+C
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G++++A E +E + + PD YT +IL++GLCKEG + A N ++++ + + VT
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVT 627
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
YN+++ C ++ +A D+
Sbjct: 628 YNTMISAFCKDKKLKEAYDL 647
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 202/435 (46%), Gaps = 64/435 (14%)
Query: 6 RLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQME------SSGIISNM 59
+A+ IF +++R P+++ +L LV+ YP++ S+S E G+ N+
Sbjct: 148 HVALQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 60 VTSSILINCYCHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHD 118
T ++L+N YC G++ A +L +++ + PD +T+ T++K + ++ +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 119 DVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
D+ G ++V+Y+ L + + ++ A Q + + D +Y+ILINGL
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKL----GSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM--------- 229
C G + L+L+ ++ +QPDVV Y T+ID + L +A L +M
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 230 ------------------VSKRI---------LPNVFTYTALIYGFCIVGQLKEATELLD 262
V++++ P++ TY LI + VG L A E++
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------MIYGFCIVGQLKE- 312
EM K I + T N ++D LCKE K+ A N+L + YG I+G +E
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 313 ----ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
A E+ DEM I P TF+ L+ GLC GK + A + + G+ P+ T+N
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 369 SLMDGHCLVSEVNKA 383
S++ G+C V KA
Sbjct: 561 SIILGYCKEGRVEKA 575
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 168/345 (48%), Gaps = 18/345 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P ++ + ++ ++ A L QME+ G+ +N VT +I + C +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 82 LAKILK-KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ +++ G+ PD +T+ TLIK + AL+ ++ +G +++ ++ + +
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ + A + +GF +D+V+Y LI G + + + AL++ +++ +
Sbjct: 463 KE----RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P V + ++I LC A + E+ +LP+ T+ ++I G+C G++++A E
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------------MIYGFCIV 307
+E + + PD YT NIL++GLCKEG + A N + MI FC
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKD 638
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+LKEA +LL EM K ++PD +T++ + L ++GK+ +L
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 30/292 (10%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVL 82
+ I IL +L K + A +L + G I + VT LI + ++ A +
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR 142
++ K P TF +LI GLC + + + A++ D++ G D +++ + L + +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 143 VISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK-IEGKLVQP 201
V++A +F+++ + F+ D + +IL+NGLCK G T+ AL IE + V
Sbjct: 570 ----GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-- 623
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D V Y T+I + CKDK + +A++L SEM K + P+ FTY + I G+L E ELL
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 262 DEMVTK-----------------------NIDPDAYTFNILVDGLCKEGKVK 290
+ K ++ +A ++ ++D LC G++K
Sbjct: 684 KKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +++ + + TP++ F ++ L A+ ++ SG++ + T + +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC G++ AF + +K ++PD T L+ GLC ++AL F + ++ + +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EV 623
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ + F + ++ A ++ +G D+ +Y+ I+ L + G+
Sbjct: 624 DTVTYNTMISAFCK----DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+LL+K GK S+ +D V N + + + Y+ +I
Sbjct: 680 DELLKKFSGKF------------GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDE 727
Query: 248 FCIVGQLKEAT 258
C G+LKE +
Sbjct: 728 LCSRGRLKEHS 738
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 170/381 (44%), Gaps = 53/381 (13%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
G I N+V + +I YC LG I A+ V ++ KG+ P TF T+I G C +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 114 LQFHDDVVAQGFRL-----------------------------------DQVSYSILTLK 138
+ +V +G R+ D +Y+IL
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI-- 352
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
R+ + A+ F D+ +G + +SY+ LI CK + A +LL ++ +
Sbjct: 353 --NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
+PD+V Y +I L + DA N+ +++ + + P+ Y L+ G C G+ A
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV--------------MMIYGF 304
L EM+ +NI PDAY + L+DG + G A+ V + MI GF
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C G L EA ++ M +++ PD +T+S ++DG K+ + A + M K KPNV
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV 590
Query: 365 VTYNSLMDGHCLVSEVNKAKD 385
VTY SL++G C + A++
Sbjct: 591 VTYTSLINGFCCQGDFKMAEE 611
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 165/394 (41%), Gaps = 33/394 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + + ++ + K K Y A L QM G ++VT ILI+ G + A ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
K++ +G PD + L+ GLC + A +++ + D Y+ L F
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF-- 495
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
I A + V +G ++D V ++ +I G C+ G AL + ++ + + P
Sbjct: 496 --IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVP 553
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D Y+TIID K + + A ++ M + PNV TYT+LI GFC G K A E
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV-------------- 307
EM +++ P+ T+ L+ L KE +M+ C+
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Query: 308 ---------------GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
GQ +E M + A ++ + LC G VK A
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+K+G P+ V++ +++ G C+V + +++
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 169/386 (43%), Gaps = 26/386 (6%)
Query: 2 SSFLRLAVFIFNRLLRTHPT-PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
S L AV I++ ++ + + P +I +L+ LVK + A + +M G +
Sbjct: 147 SGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNY 206
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
++ IL+ C+ G++ ++ KG P+ + + T+I G C ++ A ++
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+GF ++ + F + + + +V +G R+ + +I+ +
Sbjct: 267 KLKGFMPTLETFGTMINGFCKE----GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
G + + I +PDV Y +I+ LCK+ A E K ++PN +
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM 300
Y LI +C + A++LL +M + PD T+ IL
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL--------------------- 421
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
I+G + G + +A + +++ + + PDA +++L+ GLCK G+ AK + M+ + +
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAKDI 386
P+ Y +L+DG + ++A+ +
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKV 507
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 140/346 (40%), Gaps = 61/346 (17%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
+L+ +P + +++ L K + A L +M I+ + + LI+ + G
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
A V + ++KG + D + +IKG C + + AL + + + D+ +YS
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ + ++ T A++ + + + V+Y+ LING C G K A + ++
Sbjct: 560 TIIDGYVKQQDMAT----AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE-MVSKRILPNVFTYTALIYGF---- 248
++ + + P+VV YTT+I SL K+ + Y E M++ + +PN T+ L+ GF
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675
Query: 249 ---------------------------------------------CIVGQLKEATELLDE 263
C+ G +K A D+
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQ 309
MV K PD +F ++ G C G K +N+ FC +G+
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM-------DFCNLGE 774
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 26/260 (10%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S L A+ NR+ H P + I+ VK + TAI + ME + N+VT
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ-VQRALQFHDDV 120
+ LIN +C G A ++ + P+ +T+TTLI+ L + +++A+ + + +
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+ ++V+++ L F ++ + H
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNH------------------------ 688
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
GQ+ + +++ Y + + LC +V A +MV K P+ +
Sbjct: 689 -GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747
Query: 241 YTALIYGFCIVGQLKEATEL 260
+ A+++GFC+VG K+ +
Sbjct: 748 FAAILHGFCVVGNSKQWRNM 767
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 173/347 (49%), Gaps = 19/347 (5%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
LL + P ++ + ++ +KM + A L + + I ++VT + LI+ C G
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ A + ++ + PD IT+TTL+KG N + A + +D+++ +G + D +Y+
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRL-DQVSYSILINGLCKMGQTKPALQLLRK 193
+ R S +A + H+++VA D Y++ I+GLCK+G A++ RK
Sbjct: 485 RAVGELRLGDS----DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
I + PD V YTT+I ++ A NLY EM+ KR+ P+V TY LIYG G+
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR 600
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------GV--------M 299
L++A + EM + + P+ T N L+ G+CK G + A L G+ M
Sbjct: 601 LEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTM 660
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
+I C + +E +L EM+ K I+PD YT L L K+ + +
Sbjct: 661 LISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESR 707
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 187/435 (42%), Gaps = 64/435 (14%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S + A ++ ++ P++I F +L S K + +M+ I + VT
Sbjct: 216 SRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ILIN + G++ A + + G+ +F LI+G C A D+++
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 122 AQGFRLDQVSYSILTL---KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
G +Y+I F R + A + + A D VSY+ L++G
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGR-------IDDARELLSSMAAP----DVVSYNTLMHGY 384
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
KMG+ A L + + P +V Y T+ID LC+ + A L EM ++ I P+V
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF---------------------- 276
TYT L+ GF G L ATE+ DEM+ K I PD Y +
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 277 --------------NILVDGLCKEGKVKGA--------------KNVLGVMMIYGFCIVG 308
N+ +DGLCK G + A +V +I G+ G
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
Q K A L DEM+ K + P T+ +L+ G K G+++ A M K+GV+PNV+T+N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 369 SLMDGHCLVSEVNKA 383
+L+ G C +++A
Sbjct: 625 ALLYGMCKAGNIDEA 639
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P V ++ L +++ A +Y M+ I+P V T+ ++ G L+ ++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
EM +NI+ T+NIL++G K GK++ A+ G M +I G+C
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G +A + DEM+ I P T++I + LC G++ A+ +L M P+VV+
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVS 376
Query: 367 YNSLMDGH 374
YN+LM G+
Sbjct: 377 YNTLMHGY 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 63/131 (48%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
++A +++ +LR PS+I + ++ K A S +M+ G+ N++T +
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+ C G I A+ L K+ ++G P+ ++T LI C + + ++ + +++ +
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Query: 125 FRLDQVSYSIL 135
D ++ L
Sbjct: 686 IEPDGYTHRAL 696
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 199/428 (46%), Gaps = 55/428 (12%)
Query: 6 RLAVFIFNRLLRTHPT-PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+ A+ +++RLL P++ +++ L K + + +M+ + ++ T S
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ C G + A SV ++ ++ D +T+ T++ G C +++ +L+ ++
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHK 354
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
++ VSY+IL + ++ + A + A+G+ D+ +Y I I+GLC G
Sbjct: 355 NSVNIVSYNILI----KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI---------- 234
AL +++++E DV Y +IID LCK K + +A NL EM +
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 235 -------------------------LPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
P V +Y LI G C G+ EA+ + EM+
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVL----------GVMM----IYGFCIVGQLKEATE 315
PD T++IL+ GLC++ K+ A + VMM I+G C VG+L +A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
++ M +N + T++ L++G K G A + G M K G++P++++YN++M G C
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Query: 376 LVSEVNKA 383
+ V+ A
Sbjct: 651 MCRGVSYA 658
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 193/382 (50%), Gaps = 21/382 (5%)
Query: 8 AVFIFNRLLRTHP-TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
A+ +F R+ P+I + +L + V+ K + SL E++G+ N+ T ++LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C + A L + K+G++PD +++T+I L ++ AL+ D++ +G
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQV-SYSILINGLCKMGQTK 185
D Y+IL F + T A++ D ++ V +++I+I+GL K G+
Sbjct: 217 PDVTCYNILIDGFLKEKDHKT----AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
L++ +++ + D+ Y+++I LC V A ++++E+ ++ +V TY ++
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
GFC G++KE+ EL M KN + ++NIL+ GL + GK+ A + +M
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
I+G C+ G + +A ++ E+ + D Y ++ ++D LCK+ +++ A N+
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Query: 352 LGVMMKQGVKPNVVTYNSLMDG 373
+ M K GV+ N N+L+ G
Sbjct: 452 VKEMSKHGVELNSHVCNALIGG 473
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 161/374 (43%), Gaps = 46/374 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +FN L + ++ + +L + ++ L ME + N+V+ +ILI
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIK 367
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
G+I A + + KGY D T+ I GLC+N V +AL +V + G L
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 128 DQVSY----------------SILTLKFSRR---------------VISPTPVQRALQFH 156
D +Y S L + S+ +I + + A F
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 157 DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD 216
++ G R VSY+ILI GLCK G+ A ++++ +PD+ Y+ ++ LC+D
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
+ + A L+ + + + +V + LI+G C VG+L +A ++ M +N + T+
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 277 NILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVT 322
N L++G K G A + G M ++ G C+ + A E D+
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667
Query: 323 KNIDPDAYTFSILV 336
I P YT++ILV
Sbjct: 668 HGIFPTVYTWNILV 681
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
SY+ L+N + Q L E V P++ Y +I CK K A M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ P+VF+Y+ +I G+L +A EL DEM + + PD +NIL+DG KE
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 290 KGAKNVLGVM---------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
K A + + MI G G++ + ++ + M + D YT+S
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
L+ GLC G V A++V + ++ +VVTYN+++ G C ++ ++
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ ++++ L++ ++ ++ L + A+++ ME +N+VT + L+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ +G A + + K G QPD I++ T++KGLC+ V A++F DD G
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 127 LDQVSYSIL 135
+++IL
Sbjct: 672 PTVYTWNIL 680
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 190/395 (48%), Gaps = 19/395 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSIL 65
+A+ ++++++ +P + ++ + + + A+ + + ESS G+ N+VT + L
Sbjct: 208 VALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
IN Y +G + VL + ++G + +T+T+LIKG C ++ A + + +
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
DQ Y +L + R ++ A++ HD+++ G R + + LING CK GQ
Sbjct: 328 VADQHMYGVLMDGYCR----TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
A Q+ ++ ++PD Y T++D C+ V +A L +M K ++P V TY L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----KNVLGV--- 298
G+ +G + L M+ + ++ D + + L++ L K G A +NVL
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 299 -------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+MI G C + ++ EA E+LD + P T+ L G K G +K A V
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++G+ P + YN+L+ G +NK D+
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 181/425 (42%), Gaps = 57/425 (13%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ ++ A+ + +++ + P+++ + +L ++ + +SL M G+ ++ ++
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
S L+ LG A + +L +G DTIT +I GLC +V A + D+V
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ +Y L+ + + ++ A + + +G Y+ LI+G K
Sbjct: 534 IFRCKPAVQTYQALSHGYYK----VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
L+ ++ + + P V Y +I C ++ A+ EM+ K I NV
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 242 TALIYGFCIVGQLKEATELLDEMV------------------------------------ 265
+ + + ++ EA LL ++V
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENS 709
Query: 266 --TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG---------------VMMIYGFCIVG 308
K + P+ +N+ + GLCK GK++ A+ + ++I+G I G
Sbjct: 710 TPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAG 769
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
+ +A L DEM K I P+ T++ L+ GLCK G V A+ +L + ++G+ PN +TYN
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 369 SLMDG 373
+L+DG
Sbjct: 830 TLIDG 834
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 58/340 (17%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I + +++ K +H L ++ + G+ + T LI +C++G I A++
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++++KG TL +C +++ +L FRLD++ + L L
Sbjct: 634 CFEMIEKG--------ITLNVNIC--SKIANSL----------FRLDKIDEACLLL---- 669
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
Q+ + F D++ G++ + + + + K A + KL+ P
Sbjct: 670 --------QKIVDF--DLLLPGYQ--SLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATEL 260
+ ++Y I LCK + DA L+S+++S R +P+ +TYT LI+G I G + +A L
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
DEM K I P+ T+N L+ GLCK +G + A LL ++
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCK---------------------LGNVDRAQRLLHKL 816
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
K I P+A T++ L+DGL K G V A + M+++G+
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 166/412 (40%), Gaps = 56/412 (13%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+G ++ + A+ + M G+ +N + LIN YC GQ+ A + +++
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+PD T+ TL+ G C V AL+ D + + ++Y+IL +SR
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR----I 449
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
L ++ +G D++S S L+ L K+G A++L + + + D +
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+I LCK + V +A + + R P V TY AL +G+ VG LKEA + + M
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 267 KNIDPDAYTFNILVDGLCK------------EGKVKGAKNVLGV--MMIYGFCIVGQLKE 312
K I P +N L+ G K E + +G + +I G+C +G + +
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV--------------------------- 345
A EM+ K I + S + + L + K+
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 346 -----------KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K A++V K+ + PN + YN + G C ++ A+ +
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-NV 238
+ G+ AL + ++ V PDV + ++++ C+ V A E S L NV
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL-- 296
TY +LI G+ ++G ++ T +L M + + + T+ L+ G CK+G ++ A++V
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 297 -------------GVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
GV+M G+C GQ+++A + D M+ + + + L++G CK G
Sbjct: 322 LKEKKLVADQHMYGVLMD-GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++ A+ + M +KP+ TYN+L+DG+C V++A
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
++ I+ + LV +A +++ M + +P++ + +L+ G+ A + D+M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKV-------KGAKNVLGV--------MMIYGFCIVGQ 309
++ + PD +T +I+V+ C+ G V K ++ LG+ +I G+ ++G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
++ T +L M + + + T++ L+ G CK+G ++ A++V ++ ++ + + Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 370 LMDGHCLVSEVNKA 383
LMDG+C ++ A
Sbjct: 337 LMDGYCRTGQIRDA 350
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 190/377 (50%), Gaps = 20/377 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS + ++ + VK + AI L +M S GI N+V ++ LI +C + A +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
K+ K+G P+++TF+ LI+ N ++++AL+F+ + G L + + T+ +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG--LTPSVFHVHTI--IQ 417
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + AL+ D+ G V +IL + LCK G+T A +LL K+E + + P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGP 476
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+VV Y ++ C+ K + A ++S ++ K + PN +TY+ LI G + A E++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYGFCI 306
+ M + NI+ + + +++GLCK G+ A+ +L M +I GF
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G++ A +EM I P+ T++ L++GLCK ++ A + M +GVK ++
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 367 YNSLMDGHCLVSEVNKA 383
Y +L+DG C S + A
Sbjct: 657 YGALIDGFCKRSNMESA 673
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 165/370 (44%), Gaps = 61/370 (16%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+ LA +F+ +L P+ + ++ + A+ + + M SS I N V
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 65 LINCYCHLGQIPFAFSVLAKILKK------------------------------------ 88
+IN C +GQ A +LA ++++
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G P+ IT+T+L+ GLC N ++ +AL+ D++ +G +LD +Y L F +R +
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR----SN 669
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++ A +++ +G Q Y+ LI+G +G AL L +K+ ++ D+ YTT
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+ID L KD + A LY+EM + ++P+ YT ++ G GQ + ++ +EM N
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
+ P+ +N ++ G +EG L EA L DEM+ K I PD
Sbjct: 790 VTPNVLIYNAVIAGHYREG---------------------NLDEAFRLHDEMLDKGILPD 828
Query: 329 AYTFSILVDG 338
TF ILV G
Sbjct: 829 GATFDILVSG 838
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 177/386 (45%), Gaps = 53/386 (13%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
IL+ L K A L +MES GI N+V+ + ++ +C + A V + IL+KG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL-------------- 135
+P+ T++ LI G N Q AL+ + + + ++ V Y +
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 136 -----TLKFSRRVIS-------------PTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
++ R +S + A+ ++++ G + ++Y+ L+NG
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
LCK + AL++ +++ K V+ D+ Y +ID CK + A L+SE++ + + P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
Y +LI GF +G + A +L +M+ + D T+ L+DGL K+
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD----------- 737
Query: 298 VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
G L A+EL EM + PD ++++V+GL K+G+ + M K
Sbjct: 738 ----------GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 358 QGVKPNVVTYNSLMDGHCLVSEVNKA 383
V PNV+ YN+++ GH +++A
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 184/394 (46%), Gaps = 20/394 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV I N++L P + L++LV+ A L +M + G+ + VT+ +L+
Sbjct: 182 AVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMR 241
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ A VL++ +++G +PD++ ++ ++ C + A ++ + +
Sbjct: 242 ASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV 301
Query: 128 -DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
Q +Y+ + L + + A++ D++++ G ++ V+ + LI G CK
Sbjct: 302 PSQETYTSVILA----SVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
AL L K+E + P+ V ++ +I+ K+ + A Y +M + P+VF +I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G+ + +EA +L DE + + + N ++ LCK+GK A +L M
Sbjct: 418 GWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
++ G C + A + ++ K + P+ YT+SIL+DG + + A V+
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++ N V Y ++++G C V + +KA+++
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 164/354 (46%), Gaps = 30/354 (8%)
Query: 51 ESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQV 110
+S G N + L+N Y Q A ++ ++L + D I F + L+A V
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQML----ELDVIPFFPYV-NRTLSALV 209
Query: 111 QR-----ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFR 165
QR A + + +VA G D V+ +L ++ S R P AL+ + +G
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLL-MRASLREEKPA---EALEVLSRAIERGAE 265
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
D + YS+ + CK A LLR++ E KL P YT++I + K + DA
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
L EM+S I NV T+LI G C L A L D+M + P++ TF++L++
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 285 KEGKVKGAKNVLGVMMIYGFC---------IVGQLK-----EATELLDEMVTKNIDPDAY 330
K G+++ A M + G I G LK EA +L DE + + +
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 444
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ ++ LCK+GK A +L M +G+ PNVV+YN++M GHC ++ A+
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Query: 145 SPTPVQRAL--QFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD 202
+PTP+ L + D + GF ++ +++ L+N K QT A+ ++ ++ V P
Sbjct: 138 NPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF 197
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
+ +L + +T+A LYS MV+ + + T L+ + EA E+L
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV--------------- 307
+ + +PD+ +++ V CK + A ++L M C+
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G + +A L DEM++ I + + L+ G CK + A + M K+G PN VT+
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 368 NSLMDGHCLVSEVNKA 383
+ L++ E+ KA
Sbjct: 378 SVLIEWFRKNGEMEKA 393
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 194/414 (46%), Gaps = 56/414 (13%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL-INCYCHLGQIPFAF 79
TPS I +L V++ A ++ +M G++ + + ++ I C+ G+I A
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEAD 237
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
L ++++G+ PD T T ++ LC N V RA+ + ++ GF+ + ++++ L
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL-LRKIEGKL 198
++ +++A + +++V G++ + +++ LI+GLCK G T+ A +L L+ +
Sbjct: 298 CKK----GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
+P+V YT++I CK+ + A L+S M + + PNV TYT LI G C G A
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL-----------GV--------- 298
EL++ M + P+ YT+N +D LCK+ + A +L GV
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 299 -----------------------------MMIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
++I FC ++KE+ L +V+ + P
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
T++ ++ CKEG + A M + G P+ TY SL+ G C S V++A
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 185/382 (48%), Gaps = 27/382 (7%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGK-ILTSLVKMKHYPTAISLSHQMESSGIISNMVTS 62
F+RL + + LL E + +L + ++ A+ + M++ G+ + +T
Sbjct: 126 FMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITM 185
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ ++ LG I +A +V ++ +G PD+ ++ ++ G + ++Q A ++ ++
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+GF D + +++ + V RA+ + ++ GF+ + ++++ LI+GLCK G
Sbjct: 246 RGFIPDNATCTLILTALCENGL----VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV-SKRILPNVFTY 241
K A ++L ++ +P+V +T +ID LCK AF L+ ++V S PNV TY
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
T++I G+C +L A L M + + P+ T+ L++G CK
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK---------------- 405
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G A EL++ M + P+ YT++ +D LCK+ + A +L G++
Sbjct: 406 -----AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 362 PNVVTYNSLMDGHCLVSEVNKA 383
+ VTY L+ C +++N+A
Sbjct: 461 ADGVTYTILIQEQCKQNDINQA 482
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 15/253 (5%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++ A D++ +G D SY +++ G + G+ + A + L + + PD T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
I+ +LC++ LV A + +M+ PN+ +T+LI G C G +K+A E+L+EMV
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYGFCIVGQLKEA 313
P+ YT L+DGLCK G + A + + MI G+C +L A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
L M + + P+ T++ L++G CK G A ++ +M +G PN+ TYN+ +D
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 374 HCLVSEVNKAKDI 386
C S +A ++
Sbjct: 438 LCKKSRAPEAYEL 450
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 19/356 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A++ F +++ P++I F ++ L K A + +M +G N+ T + LI+
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 68 CYCHLGQIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C G AF + K+++ Y+P+ T+T++I G C ++ RA + QG
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ +Y+ L + RA + + + +GF + +Y+ I+ LCK +
Sbjct: 391 PNVNTYTTLINGHCK----AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A +LL K ++ D V YT +I CK + A + M ++ LI
Sbjct: 447 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
FC ++KE+ L +V+ + P T+ ++ CKEG + A M
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
+I G C + EA +L + M+ + + P T L CK A
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
++ ++G+ A+ ++ ++ + + P + +++ + L+ A N++ EM +
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
++P+ +Y ++ G G+++EA L M+ + PD T +++ LC+ G V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 294 NVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
M +I G C G +K+A E+L+EMV P+ YT + L+DGL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 340 CKEGKVKGA-KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
CK G + A + L ++ KPNV TY S++ G+C ++N+A+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 15/244 (6%)
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
D+ QG ++ + ++ ++G + A + ++ + V PD Y ++ +D
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+ +A + M+ + +P+ T T ++ C G + A +M+ P+ F
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 278 ILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTK 323
L+DGLCK+G +K A +L M +I G C G ++A L ++V
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 324 NI-DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
+ P+ +T++ ++ G CKE K+ A+ + M +QG+ PNV TY +L++GHC +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 383 AKDI 386
A ++
Sbjct: 412 AYEL 415
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 188/394 (47%), Gaps = 49/394 (12%)
Query: 42 TAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLI 101
A+ L +M SG+I ++T + L+N C G I A ++ ++ + G P+ +++ TLI
Sbjct: 139 AALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 102 KGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI----------------- 144
KGLC V +AL + + G R ++V+ +I+ ++ +
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 145 SPTP------------------VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ P V +AL+ ++ + D V Y+++I GLC G
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + + + V PDV Y T+I +LCK+ +A +L+ M + + P+ +Y +I
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G CI G + A E L M+ ++ P+ +N+++DG + G A +VL +M
Sbjct: 379 GLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+I+G+ G+L +A + +EM + I PD T+++L+ C G ++ A +
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+++G +P+++TY L+ G C + KA+ +
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 4/277 (1%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ S K + A+ + +M + ++ V +++I C G + A+ + ++K+G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
PD T+ TLI LC + A H + G DQ+SY ++ + + V
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII----QGLCIHGDV 386
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
RA +F ++ + + ++++I+G + G T AL +L + V+P+V +
Sbjct: 387 NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
I K + DA+ + +EM S +I P+ TY L+ C +G L+ A +L DEM+ +
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
PD T+ LV GLC +G++K A+++L + G I
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 53/268 (19%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
+S ++ LC G+ AL L +K+ V P ++ + +++ LCK + A L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG--- 287
PN +Y LI G C V + +A L + M I P+ T NI+V LC++G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 288 ---------------------------------------------KVKGAKNVLGVMMIY 302
K KNV ++Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 303 -----GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
G C G + A + +MV + ++PD +T++ L+ LCKEGK A ++ G M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 358 QGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
GV P+ ++Y ++ G C+ +VN+A +
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANE 391
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 53/235 (22%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
++++I+ LC + A L +M+ ++P + T+ L+ G C G +++A L+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------------- 303
P+ ++N L+ GLC V A + M YG
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 304 ------------------------FCIV--------GQLKEATELLDEMVTKNIDPDAYT 331
C + G + +A E+ EM KN+ D+
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+++++ GLC G + A + M+K+GV P+V TYN+L+ C + ++A D+
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + N +L P++ ++ VK A + ++M S+ I + T ++L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C LG + AF + ++L++G QPD IT+T L++GLC ++++A + A G +
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 128 DQVSYSILTLKFSR 141
D V + IL K++R
Sbjct: 544 DHVPFLILAKKYTR 557
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+++I+ Y G A SVL +L G +P+ T LI G ++ A +++ +
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
D +Y++L + ++ A Q +D+++ +G + D ++Y+ L+ GLC G
Sbjct: 469 TKIHPDTTTYNLLL----GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
+ K A LL +I+ + D V + + + + +A+ +Y + ++ R
Sbjct: 525 RLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATR 575
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 168/338 (49%), Gaps = 19/338 (5%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA-QVQRALQFHDDVV 121
S LI+ Y G A SV + + G +P+ +T+ +I + ++ +F D++
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
G + D+++++ L SR + + A D++ + D SY+ L++ +CK
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGL----WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
GQ A ++L ++ K + P+VV Y+T+ID K +A NL+ EM I + +Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
L+ + VG+ +EA ++L EM + I D T+N L+ G K+GK K V M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 300 ------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
+I G+ G KEA E+ E + + D +S L+D LCK G V
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
A +++ M K+G+ PNVVTYNS++D + ++++ D
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 181/377 (48%), Gaps = 21/377 (5%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
F ++A F F+ + R P I F +L + + A +L +M + I ++ + +
Sbjct: 320 FKQVAKF-FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
L++ C GQ+ AF +LA++ K P+ ++++T+I G + AL ++
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G LD+VSY+ L +++ S + AL ++ + G + D V+Y+ L+ G K G+
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRS----EEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
++ +++ + V P+++ Y+T+ID K L +A ++ E S + +V Y+A
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV-KGAKNVLGVMMIY 302
LI C G + A L+DEM + I P+ T+N ++D + + + A G + +
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 303 GFCIVGQLKEAT-----ELLDEMVTKNIDPDAYTFSILVDGLCKEG--KVKGAKNVLGVM 355
+ L E +L ++ T++ + C+EG ++ V M
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKD--------CEEGMQELSCILEVFRKM 666
Query: 356 MKQGVKPNVVTYNSLMD 372
+ +KPNVVT++++++
Sbjct: 667 HQLEIKPNVVTFSAILN 683
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 26/290 (8%)
Query: 98 TTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD 157
+ +I L +V A + + A G+ ++S L + R + + A+ +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH----EEAISVFN 292
Query: 158 DVVAQGFRLDQVSYSILINGLCKMG-QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD 216
+ G R + V+Y+ +I+ K G + K + +++ VQPD + + +++ +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
L A NL+ EM ++RI +VF+Y L+ C GQ+ A E+L +M K I P+ ++
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 277 NILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
+ ++DG K G+ A N+ G M G + D +++ L+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIAL---------------------DRVSYNTLL 451
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K G+ + A ++L M G+K +VVTYN+L+ G+ + ++ K +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 171/422 (40%), Gaps = 92/422 (21%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+++ + ++ K + A++L +M GI + V+ + L++ Y +G+ A +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++ G + D +T+ L+ G + + ++ + + ++YS L +S+
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + A++ + + G R D V YS LI+ LCK G A+ L+ ++ + + P
Sbjct: 527 GGL----YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 202 DVVMYTTIIDSLCKD--------------------------------------KLVTDAF 223
+VV Y +IID+ + +L T++
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 224 N------------------LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
N ++ +M I PNV T++A++ ++A+ LL+E+
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK----EATELLDEMV 321
L D KV G V G++M GQ + +A L D++
Sbjct: 703 -------------LFD-----NKVYGV--VHGLLM-------GQRENVWLQAQSLFDKVN 735
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ + ++ L D L G+ +GA+ V + V NV + +S +D H + S
Sbjct: 736 EMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWS-DSCLDLHLMSSGAA 794
Query: 382 KA 383
+A
Sbjct: 795 RA 796
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 178/369 (48%), Gaps = 21/369 (5%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
P SI F ++ ++M + A+ +S +M+ S ++ ++N + +
Sbjct: 128 PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLS---ILNGLVRRRRFDSVW 184
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
++ +G PD + L + + + D++ + G + + Y+I L
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
R ++ A + + + G + +YS +I+G CK G + A L ++I +
Sbjct: 245 CR----DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
P+VV++ T++D CK + + A +L+ MV + PN++ Y LI+G C G + EA
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 260 LLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFC 305
LL EM + N+ PD +T+ IL++GLC E +V A + M +I+G+C
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
+++A +L EM ++P+ TFS L+DG C +K A + M +G+ P+VV
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 366 TYNSLMDGH 374
TY +L+D H
Sbjct: 481 TYTALIDAH 489
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 163/370 (44%), Gaps = 60/370 (16%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A ++ +L P+++ FG ++ K + TA SL M G+ N+ +
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ +C G + A +L+++ PD T+T LI GLC+ +D VA+
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI-----------EDQVAEA 393
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
RL Q K I P+ +Y+ LI+G CK
Sbjct: 394 NRLFQ--------KMKNERIFPS--------------------SATYNSLIHGYCKEYNM 425
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ AL L ++ V+P+++ ++T+ID C + + A LY EM K I+P+V TYTAL
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
I +KEA L +M+ I P+ +TF LVDG KEG+
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR---------------- 529
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
L A + E + + F+ L++GLC+ G + A M G+ P++
Sbjct: 530 -----LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584
Query: 365 VTYNSLMDGH 374
+Y S++ GH
Sbjct: 585 CSYVSMLKGH 594
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 19/268 (7%)
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
SIL RR V L ++++G D Y +L K G +LL
Sbjct: 169 SILNGLVRRRRFDSVWVDYQL-----MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
++ ++P+V +YT I LC+D + +A ++ M +LPN++TY+A+I G+C G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------------- 299
+++A L E++ + P+ F LVDG CK ++ A+++ M
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 300 -MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
+I+G C G + EA LL EM + N+ PD +T++IL++GLC E +V A + M +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ P+ TYNSL+ G+C + +A D+
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDL 431
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 4/259 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F ++ PS + ++ K + A+ L +M +SG+ N++T S LI+ YC
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ I A + ++ KG PD +T+T LI A ++ AL+ + D++ G +
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+++ L F + + A+ F+ + Q + V ++ LI GLC+ G A +
Sbjct: 516 TFACLVDGFWKE----GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ + PD+ Y +++ ++K +TD L +M+ ILPN+ L +
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQA 631
Query: 251 VGQLKEATELLDEMVTKNI 269
G +K A L + K +
Sbjct: 632 NGYVKSACFLTNSSRLKTV 650
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + + + + +P + + ++ L A L +M++ I + T + LI+
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC + A + +++ G +P+ ITF+TLI G C ++ A+ + ++ +G
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ L + ++ AL+ + D++ G + +++ L++G K G+ A
Sbjct: 478 DVVTYTALIDAHFKE----ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ ++ + + V +T +I+ LC++ + A +S+M S I P++ +Y +++ G
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
++ + L +M+ I P+ +L G VK A
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 193/394 (48%), Gaps = 24/394 (6%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
+SS + + R L P + + ++ L K Y A L +M GI N++
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
+ S LIN C+ GQI AFS L ++LK+G P+ T ++L+KG L AL + +
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 121 VAQGFRL--DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
+ +GF L + V+Y+ L F S + +A+ + G + +Y LING
Sbjct: 343 I-RGFGLQPNVVAYNTLVQGFC----SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
K G A+ + K+ P+VV+YT ++++LC+ +A +L M + P+V
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKN-IDPDAYTFNILVDGLCKEGKVKGAKNVL- 296
T+ A I G C G+L A ++ +M ++ P+ T+N L+DGL K +++ A +
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 297 -----GV--------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
GV +++G C G A +L+ +M+ PD T ++++ CK+G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 344 KVKGAKNVLGVMM--KQGVKPNVVTYNSLMDGHC 375
K + A +L ++ ++ +P+V++Y +++ G C
Sbjct: 578 KAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+I + V + + G++P+ T+ L+K LC N +V A + ++ +G D VSY+
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
VIS + + L +A+ F Y+ LINGLCK K A +L+R+
Sbjct: 221 T--------VIS-SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMRE 271
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
+ K + P+V+ Y+T+I+ LC + AF+ ++M+ + PN++T ++L+ G + G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 254 LKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------------- 299
+A +L ++M+ + P+ +N LV G C G + A +V M
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 300 -MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
+I GF G L A + ++M+T P+ ++ +V+ LC+ K K A++++ +M K+
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
P+V T+N+ + G C ++ A+ +
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 176/392 (44%), Gaps = 25/392 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F R+ PS+ + +L +L+ + M+ G N+ T ++L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C ++ A +L ++ KG PD +++TT+I +C V+ + +A+ F
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEP 244
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
Y+ L + + A + ++V +G + +SYS LIN LC GQ + A
Sbjct: 245 VVSVYNALINGLCKE----HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL-PNVFTYTALIY 246
L ++ + P++ ++++ DA +L+++M+ L PNV Y L+
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
GFC G + +A + M P+ T+ L++G K G + GA + M
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
M+ C + KEA L++ M +N P TF+ + GLC G++ A+ V
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 353 GVMMKQG-VKPNVVTYNSLMDGHCLVSEVNKA 383
M +Q PN+VTYN L+DG + + +A
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 9/221 (4%)
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
QGF + + +I+ ++G + A+++ +I+ P V +Y ++D+L + +
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
+ +Y +M PNVFTY L+ C ++ A +LL EM K PDA ++ ++
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 282 GLCKEGKVKGAKN-------VLGV--MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
+C+ G VK + V+ V +I G C K A EL+ EMV K I P+ ++
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
S L++ LC G+++ A + L M+K+G PN+ T +SL+ G
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 13/280 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F+ + +P+I +G ++ K A+ + ++M +SG N+V + ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + A S++ + K+ P TF IKGLC + L + + V Q +
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR----LDWAEKVFRQMEQQ 486
Query: 128 DQVSYSILTL-KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ +I+T + + ++ A ++ +G +Y+ L++G C G
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 187 ALQLLRK--IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS---KRILPNVFTY 241
ALQL+ K ++GK PD + II + CK A + ++VS ++ P+V +Y
Sbjct: 547 ALQLVGKMMVDGK--SPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISY 603
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
T +I+G C ++ LL+ M++ I P T+++L++
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 7/244 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV+I+N++L + P+++ + ++ +L + + A SL M ++ T + I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 68 CYCHLGQIPFAFSVLAKILKKGY-QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C G++ +A V ++ ++ P+ +T+ L+ GL +++ A ++ +G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+Y+ L L S P ALQ ++ G D+++ +++I CK G+ +
Sbjct: 526 WSSSTYNTL-LHGSCNAGLPGI---ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 187 ALQLLRKIE--GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
A Q+L + + +PDV+ YT +I LC+ D L M+S I+P++ T++ L
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Query: 245 IYGF 248
I F
Sbjct: 642 INCF 645
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 49/381 (12%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQM-----ESSGI 55
M FLR+ F R +R+ T +L L++ + + L H M ES GI
Sbjct: 140 MRIFLRIPDFGVKRSVRSLNT--------LLNVLIQNQRF----DLVHAMFKNSKESFGI 187
Query: 56 ISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQ 115
N+ T ++L+ C I A+ VL +I G P+ +T+TT++ G ++ A +
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 116 FHDDVVAQGFRLDQVSYSILT---LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
++++ +G+ D +Y++L K R A DD+ ++V+Y
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGR-------FSEAATVMDDMEKNEIEPNEVTYG 300
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
++I LCK ++ A + ++ + PD + +ID+LC+D V +A L+ +M+
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+P+ + LI+ C G++ EA +L DE +I P T+N L+ G+C++G
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKG----- 414
Query: 293 KNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+L EA L D+M + P+A+T+++L++GL K G VK VL
Sbjct: 415 ----------------ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 353 GVMMKQGVKPNVVTYNSLMDG 373
M++ G PN T+ L +G
Sbjct: 459 EEMLEIGCFPNKTTFLILFEG 479
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 26/339 (7%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TP+I ++ +L K +A + ++ S G++ N+VT + ++ Y G + A
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
VL ++L +G+ PD T+T L+ G C + A DD+ ++V+Y ++
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI---- 303
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R + A D+++ + F D +I+ LC+ + A L RK+
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD + +T+I LCK+ VT+A L+ E K +P++ TY LI G C G+L EA L
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
D+M + P+A+T+N+L++GL K G V KE +L+EM
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNV---------------------KEGVRVLEEM 461
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
+ P+ TF IL +GL K GK + A ++ + + G
Sbjct: 462 LEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
++L+ LCK + A ++L +I + P++V YTTI+ + A + EM+
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
+ P+ TYT L+ G+C +G+ EA ++D+M I+P+ T+ +++ LCKE K
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 292 AKNVLGVMMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVD 337
A+N+ M+ F C ++ EA L +M+ N PD S L+
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 338 GLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
LCKEG+V A+ + K G P+++TYN+L+ G C E+ +A
Sbjct: 375 WLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEA 419
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
+ P++ ++ +LCK + A+ + E+ S ++PN+ TYT ++ G+ G ++ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGF 304
+L+EM+ + PDA T+ +L+DG CK G+ A V+ M MI
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C + EA + DEM+ ++ PD+ ++D LC++ KV A + M+K P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
++L+ C V +A+ +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKL 388
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 187/428 (43%), Gaps = 55/428 (12%)
Query: 8 AVFIFNRLLRTHPT-PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGI---ISNMVTSS 63
+ I LR H PS + F ++ V+ AI + M + + N V S+
Sbjct: 117 GLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSA 176
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ I+ +C +G+ A + G P+ +T+TTL+ LC +V +
Sbjct: 177 V-ISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+GF D V YS + + AL ++V +G D VSYSILI+GL K G
Sbjct: 236 EGFEFDCVFYS----NWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ AL LL K+ + V+P+++ YT II LCK + +AF L++ ++S I + F Y
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----KNVLGV 298
LI G C G L A +L +M + I P T+N +++GLC G+V A K V+G
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD 411
Query: 299 MMIY----------------------------------------GFCIVGQLKEATELLD 318
++ Y F ++G EA L
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
M ++ PD T++ ++ G CK G+++ A + + K V V YN ++D C
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 379 EVNKAKDI 386
++ A ++
Sbjct: 531 MLDTATEV 538
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 178/421 (42%), Gaps = 68/421 (16%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + ++++ P++I + I+ L KM A L +++ S GI + LI+
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G + AFS+L + ++G QP +T+ T+I GLC+ +V A D V++G
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVG 410
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D ++YS L + I + L+ + +D V +IL+ MG A
Sbjct: 411 DVITYSTLLDSY----IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L R + + PD Y T+I CK + +A +++E+ K + Y +I
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDA 525
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---- 303
C G L ATE+L E+ K + D +T L+ + G G K +LG ++YG
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG---GDKGILG--LVYGLEQL 580
Query: 304 ---------------FCIVGQLKEATE-----------------LLDEMVTKNIDPDAY- 330
C G + A E +L +V DAY
Sbjct: 581 NSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYL 640
Query: 331 ----------------TFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
++I+++GLCKEG + A N+ +GV N +TYNSL++G
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 375 C 375
C
Sbjct: 701 C 701
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 41/333 (12%)
Query: 52 SSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITF-TTLIKGLCLNAQV 110
+S + M+ +IL+ C G A V + +KG T+TF +T++K L N
Sbjct: 581 NSDVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNL-- 633
Query: 111 QRALQFHDDVVAQG----FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRL 166
R+L + VV G +D + Y+I+ + + +AL ++G L
Sbjct: 634 -RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGF----LVKALNLCSFAKSRGVTL 688
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
+ ++Y+ LINGLC+ G AL+L +E + P V Y +ID+LCK+ L DA L
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
MVSK ++PN+ Y +++ G+C +GQ ++A ++ + + PDA+T + ++ G CK+
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
G ++EA + E KNI D + F L+ G C +G+++
Sbjct: 809 ---------------------GDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
A+ +L M+ V +VV + +D SE
Sbjct: 848 EARGLLREML---VSESVVKLINRVDAELAESE 877
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 187/446 (41%), Gaps = 88/446 (19%)
Query: 24 IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
+I + +L S +K+++ + + + + I ++V +IL+ + +G A ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
+ + PDT T+ T+IKG C Q++ AL+ +++ R VS ++ + +
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-----RKSSVSAAVCYNRIIDAL 526
Query: 144 ISPTPVQRALQFHDDVVAQGFRLD-----QVSYSILING--------------------- 177
+ A + ++ +G LD + +SI NG
Sbjct: 527 CKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL 586
Query: 178 ---------LCKMGQTKPALQL------------------------LRKI---------- 194
LCK G + A+++ LR +
Sbjct: 587 GMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E L DV+ YT II+ LCK+ + A NL S S+ + N TY +LI G C G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------MIY--- 302
EA L D + + P T+ IL+D LCKEG A+ +L M +IY
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 303 --GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
G+C +GQ ++A ++ + + PDA+T S ++ G CK+G ++ A +V + +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ + L+ G C + +A+ +
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGL 852
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 170/391 (43%), Gaps = 86/391 (21%)
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF-- 139
L +LK G+ P + ++ L + LQF+ + ++ ++ YSI++ F
Sbjct: 14 LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73
Query: 140 ---------------SRRVISPT-----------------PVQRALQFHDDVVAQGFRLD 167
S+ I P P + L D + G
Sbjct: 74 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPS 133
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP--DVVMYTTIIDSLCKDKLVTDAFNL 225
+++ LI + G+ A+++L + K V D + + +I CK A
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 193
Query: 226 YSEMVSKRIL-PNVFTYTALIYGFCIVGQLKEATELL----------------------- 261
+ V +L PN+ TYT L+ C +G++ E +L+
Sbjct: 194 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 253
Query: 262 ------------DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------- 299
EMV K ++ D +++IL+DGL KEG V+ A +LG M
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Query: 300 ----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
+I G C +G+L+EA L + +++ I+ D + + L+DG+C++G + A ++LG M
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++G++P+++TYN++++G C+ V++A ++
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 69/303 (22%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+ L PS + +G ++ +L K + A L M S G++ N++ + +++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YC LGQ A V+++ + PD T +++IKG C ++ AL
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL------------- 815
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
S+ T +F D ++ F + LI G C G+ + A
Sbjct: 816 -----SVFT-----------------EFKDKNISADF----FGFLFLIKGFCTKGRMEEA 849
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDS--------------LCKDKLVTDAFNLYSEMVSKR 233
LLR++ LV VV +D+ LC+ V A + E +S
Sbjct: 850 RGLLREM---LVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDE-ISST 905
Query: 234 ILP---NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
I P N+ +Y L + L + E +E+ K+ D ++ + V LC GK++
Sbjct: 906 IYPSGKNLGSYQRLQF-------LNDVNE--EEIKKKDYVHDFHSLHSTVSSLCTSGKLE 956
Query: 291 GAK 293
A
Sbjct: 957 QAN 959
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 184/386 (47%), Gaps = 18/386 (4%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S F A+ ++ R++ PS+ + ++ L K + + + L +ME+ G+ N+ T
Sbjct: 201 SRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+I I G+I A+ +L ++ +G PD +T+T LI LC ++ A + + +
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ D+V+Y L +FS + QF ++ G D V+++IL++ LCK
Sbjct: 321 TGRHKPDRVTYITLLDRFSDN----RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G A L + + + P++ Y T+I L + + DA L+ M S + P +TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV------ 295
I + G A E ++M TK I P+ N + L K G+ + AK +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 296 LGV--------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
+G+ MM+ + VG++ EA +LL EM+ +PD + L++ L K +V
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDG 373
A + M + +KP VVTYN+L+ G
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAG 582
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 186/424 (43%), Gaps = 48/424 (11%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F R+ P+++ + +L L K AI L M G N +T + L +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF--------HDD 119
C C ++ A +L K++ G PD T+ T+I GL N QV+ A+ F + D
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Query: 120 VVAQGFRLDQV--------SYSILT---------------LKFSRRVISPTPVQRALQFH 156
V L V +Y I+T +++ + A+ F
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 157 DDVVAQGFRLDQVSYSI-LINGLCKMGQTKPALQLLRKIEGKL-VQPDVVMYTTIIDSLC 214
+ +VA G D S + +I CK A L K L VQP + Y +I L
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+ ++ A +++ ++ S +P+V TY L+ + G++ E EL EM T + +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 275 TFNILVDGLCKEGKVKGAKNVLGVMM---------------IYGFCIVGQLKEATELLDE 319
T NI++ GL K G V A ++ +M I G G+L EA +L +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
M+ P+ ++IL++G K G+ A + M+K+GV+P++ TY+ L+D C+V
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 380 VNKA 383
V++
Sbjct: 977 VDEG 980
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 182/413 (44%), Gaps = 53/413 (12%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A +F ++ P + + +L + + +ME G + ++VT +I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L++ C G AF L + +G P+ T+ TLI GL ++ AL+ ++ + G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 125 FRLDQVSY------------SILTL----KFSRRVISPTPV---------------QRAL 153
+ +Y S+ L K + I+P V + A
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 154 QFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
Q + G D V+Y++++ K+G+ A++LL ++ +PDV++ ++I++L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 214 CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
K V +A+ ++ M ++ P V TY L+ G G+++EA EL + MV K P+
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
TFN L D LCK +V A +L MM G C+ PD +T++
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CV--------------------PDVFTYN 647
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ GL K G+VK A MK+ V P+ VT +L+ G S + A I
Sbjct: 648 TIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ + +A +F ++ T P + + +L + K L +M + +N +T
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 62 SSILINCYCHLGQIPFAFSVLAKILK-KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
+I+I+ G + A + ++ + + P T+ LI GL + ++ A Q + +
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+ G R + Y+IL F + A +V +G R D +YS+L++ LC
Sbjct: 918 LDYGCRPNCAIYNILINGFGK----AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR-ILPNVF 239
+G+ L ++++ + PDVV Y II+ L K + +A L++EM + R I P+++
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
TY +LI I G ++EA ++ +E+ ++P+ +TFN L+ G GK + A V M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 300 MIYGF 304
+ GF
Sbjct: 1094 VTGGF 1098
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 21/312 (6%)
Query: 72 LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
L Q P+A L K+ + G+ + ++ LI L + A++ + ++ +GFR +
Sbjct: 169 LKQAPYA---LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225
Query: 132 YSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
YS L + +R + + ++ G + + +++I I L + G+ A ++L
Sbjct: 226 YSSLMVGLGKR----RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
++++ + PDVV YT +ID+LC + + A ++ +M + R P+ TY L+ F
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------------ 299
L + EM PD TF ILVD LCK G A + L VM
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 300 --MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
+I G V +L +A EL M + + P AYT+ + +D K G A M
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 358 QGVKPNVVTYNS 369
+G+ PN+V N+
Sbjct: 462 KGIAPNIVACNA 473
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 60/363 (16%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ L++ A + Q++S+G I ++ T + L++ Y G+I F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ + +TIT +I GL V AL + D++ S
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM------------------SD 884
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
R SPT +Y LI+GL K G+ A QL + +P
Sbjct: 885 RDFSPTAC--------------------TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ +Y +I+ K A L+ MV + + P++ TY+ L+ C+VG++ E
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
E+ ++PD +N++++GL K + L+EA L +EM
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHR---------------------LEEALVLFNEMK 1023
Query: 322 T-KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
T + I PD YT++ L+ L G V+ A + + + G++PNV T+N+L+ G+ L +
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 381 NKA 383
A
Sbjct: 1084 EHA 1086
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 195/499 (39%), Gaps = 128/499 (25%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ F ++ P+I+ L SL K A + + ++ G++ + VT ++++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTI-------------------------------- 95
CY +G+I A +L+++++ G +PD I
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 96 ---TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA 152
T+ TL+ GL N ++Q A++ + +V +G + ++++ L + V A
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN----DEVTLA 627
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
L+ ++ G D +Y+ +I GL K GQ K A+ +++ KLV PD V T++
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPG 686
Query: 213 LCKDKLVTDAF---------------NLYSEMVSKRILPNV-------FTYTALIYGFCI 250
+ K L+ DA+ NL+ E + IL F+ + G C
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 251 VGQL--------------KEATELLDEMVTKN--IDPDAYTFNILVDGLCKEGKVKGAKN 294
G L E TK+ + P T+N+L+ GL + ++ A++
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 295 V---------LGVMMIYGFCI-----VGQLKEATELLDEMVT------------------ 322
V + + Y F + G++ E EL EM T
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 323 ------------------KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
++ P A T+ L+DGL K G++ AK + M+ G +PN
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 365 VTYNSLMDGHCLVSEVNKA 383
YN L++G E + A
Sbjct: 927 AIYNILINGFGKAGEADAA 945
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 40/260 (15%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P+ +G ++ L K A L M G N +ILIN + G+ A +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ +++K+G +PD T++ L+ LC+ +V L + ++ G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG---------------- 991
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE-GKLV 199
++P D V Y+++INGL K + + AL L +++ + +
Sbjct: 992 ---LNP--------------------DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
PD+ Y ++I +L +V +A +Y+E+ + PNVFT+ ALI G+ + G+ + A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 260 LLDEMVTKNIDPDAYTFNIL 279
+ MVT P+ T+ L
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQL 1108
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 131/308 (42%), Gaps = 39/308 (12%)
Query: 101 IKGLCLNAQVQRALQFHDDVVA---QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD 157
IK C + V L+FH + + +R + S++++K S F
Sbjct: 25 IKAKCRDNLVTGGLKFHALKIGSRKKHWRRKSMRCSVVSMKSS-------------DFSG 71
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT-----IIDS 212
++ + + D S + GL T + + + G L +++TT ++++
Sbjct: 72 SMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLN----LVHTTETCNYMLEA 127
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
L D + + ++ M + I + TY + + G LK+A L +M +
Sbjct: 128 LRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLN 187
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF---------CIVG-----QLKEATELLD 318
AY++N L+ L K A V M++ GF +VG + LL
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
EM T + P+ YTF+I + L + GK+ A +L M +G P+VVTY L+D C
Sbjct: 248 EMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 379 EVNKAKDI 386
+++ AK++
Sbjct: 308 KLDCAKEV 315
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 185/380 (48%), Gaps = 18/380 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ I ++ + P I + I+ +L K H TA+ L M SG +++T + +I
Sbjct: 158 AMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G A L+ G P IT+T L++ +C RA++ +D+ +G
Sbjct: 218 CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYP 277
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+Y+ L + ++ R + V +Q +++ G L+ V+Y+ L++ LC
Sbjct: 278 DIVTYNSL-VNYNCRRGNLEEVASVIQH---ILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L + P V+ Y +I+ LCK +L++ A + + +M+ ++ LP++ TY ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
G + +A ELL + P T+N ++DGL K+G +K A + M
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+IYGFC ++EA ++L E + T+ +++ GLCK+ +++ A V+
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 354 VMMKQGVKPNVVTYNSLMDG 373
+M+ G KP+ Y +++ G
Sbjct: 514 IMLTGGCKPDETIYTAIVKG 533
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 157/345 (45%), Gaps = 25/345 (7%)
Query: 29 KILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK 88
+IL +L A L M + + + S L+ + Q+ A +L ++
Sbjct: 109 EILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMS 168
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G PDTIT+ +I LC ++ AL +D+ G D ++Y+ + R +
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVI----RCMFDYGN 224
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++A++F D + G ++Y++L+ +C+ + A+++L + + PD+V Y +
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+++ C+ + + ++ ++S + N TY L++ C E E+L+ M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
P T+NIL++GLCK L A + +M+ + PD
Sbjct: 345 YCPTVITYNILINGLCK---------------------ARLLSRAIDFFYQMLEQKCLPD 383
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
T++ ++ + KEG V A +LG++ P ++TYNS++DG
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 30/241 (12%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+R+ +FH V R + KP Q +G + + D
Sbjct: 66 AERSSEFHHYGVGTNLR----------------ARVKPMKQFGLSSDGPITENDEETNNE 109
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
I+ +LC + +TDA L M +P+ + + L+ G + QL +A +L MV
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF------------CIV--GQLKEAT 314
PD T+N+++ LCK+G ++ A +L M + G C+ G ++A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+ + P T+++LV+ +C+ A VL M +G P++VTYNSL++ +
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 375 C 375
C
Sbjct: 290 C 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 14/234 (5%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D+ + + +++ LC G+ A +L+ + P + ++ L + + A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
MV +P+ TY +I C G ++ A LL++M PD T+N ++ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 287 GKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNIDPDAYTF 332
G + A + G C A E+L++M + PD T+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ LV+ C+ G ++ +V+ ++ G++ N VTYN+L+ C ++ ++I
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 31/267 (11%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+ + ++ + + S+ + S G+ N VT + L++ C +
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + + Y P IT+ LI GLC + RA+ F ++ Q D V+Y+ + S+
Sbjct: 337 LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 142 RVISPTPVQ-------------------------------RALQFHDDVVAQGFRLDQVS 170
+ ++ +AL+ + ++ G D ++
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
LI G C+ + A Q+L++ + Y +I LCK K + A + M+
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEA 257
+ P+ YTA++ G +G EA
Sbjct: 517 TGGCKPDETIYTAIVKGVEEMGMGSEA 543
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 178/379 (46%), Gaps = 21/379 (5%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TP I F ++ L K+ A + +M S +N + + LI + + G+
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ ++ + PD T + + + ++ +++ A+ F D SYSIL
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI---- 559
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+I + + QG LD +Y+I+I+G CK G+ A QLL +++ K +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P VV Y ++ID L K + +A+ L+ E SKRI NV Y++LI GF VG++ EA +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA--------------KNVLGVMMIYGFCI 306
L+E++ K + P+ YT+N L+D L K ++ A V ++I G C
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
V + +A EM + + P +++ ++ GL K G + A + G P+
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 367 YNSLMDGHCLVSEVNKAKD 385
YN++++G +S N+A D
Sbjct: 800 YNAMIEG---LSNGNRAMD 815
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 183/422 (43%), Gaps = 54/422 (12%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F ++ P++ F ++ K +A+SL +M+SS + +++V ++ I+ +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+G++ A+ +I G +PD +T+T++I LC ++ A++ + +
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ + + + S A + A+G ++Y+ ++ L KMG+ AL++
Sbjct: 310 AYNTMIMGYG----SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ K P++ Y +ID LC+ + AF L M + PNV T ++ C
Sbjct: 366 FEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV--------------- 295
+L EA + +EM K PD TF L+DGL K G+V A V
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 296 --------------------------------LGVMMIYGFCI--VGQLKEATELLDEMV 321
L ++ Y C+ G+ ++ + +E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ PDA ++SIL+ GL K G + M +QG + YN ++DG C +VN
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 382 KA 383
KA
Sbjct: 605 KA 606
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 173/391 (44%), Gaps = 19/391 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A F+ + P + + ++ L K A+ + +E + + + +I
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
Y G+ A+S+L + KG P I + ++ L +V AL+ +++
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-A 374
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ +Y+IL R + A + D + G + + +I+++ LCK +
Sbjct: 375 PNLSTYNILIDMLCR----AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + +++ K+ PD + + ++ID L K V DA+ +Y +M+ N YT+LI
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG--------- 297
F G+ ++ ++ +M+ +N PD N +D + K G+ + + +
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 298 -----VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
++I+G G E EL M + D ++I++DG CK GKV A +L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M +G +P VVTY S++DG + +++A
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 18/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIE-FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
A+ F R P E + +L + + +++ + +M +G ++ T ++
Sbjct: 81 AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMV 140
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
++ + V+ + K ++P +TTLI L + G+
Sbjct: 141 LGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE 200
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
++ L F++ V AL D++ + D V Y++ I+ K+G+
Sbjct: 201 PTVHLFTTLIRGFAKE----GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + +IE ++PD V YT++I LCK + +A ++ + R +P + Y +I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G+ G+ EA LL+ K P +N ++ L K GKV A V M
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN 376
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+I C G+L A EL D M + P+ T +I+VD LCK K+ A +
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M + P+ +T+ SL+DG V V+ A
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F + P + ++ L+K L + M+ G + + +I+I+ +C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G++ A+ +L ++ KG++P +T+ ++I GL ++ A ++ ++ L+ V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
YS L F + + A ++++ +G + +++ L++ L K + AL
Sbjct: 659 IYSSLIDGFGK----VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ ++ P+ V Y +I+ LCK + AF + EM + + P+ +YT +I G
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
G + EA L D PD+ +N +++GL
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 156/370 (42%), Gaps = 29/370 (7%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
I+ ++ + +P + + + K ++ ++++ + + + SILI+
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + + + ++G DT + +I G C +V +A Q +++ +GF V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y + ++ + A ++ ++ L+ V YS LI+G K+G+ A +
Sbjct: 624 TYGSVIDGLAK----IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
L ++ K + P++ + +++D+L K + + +A + M + PN TY LI G C
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
V + +A EM + + P ++ ++ GL K G +
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK---------------------AGNI 778
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV----KPNVVT 366
EA L D PD+ ++ +++GL + A ++ ++G+ K VV
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVL 838
Query: 367 YNSLMDGHCL 376
++L CL
Sbjct: 839 LDTLHKNDCL 848
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+++ +G ++ L K+ A L + +S I N+V S LI+ + +G+I A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++++KG P+ T+ +L+ L ++ AL V Q S
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEAL-----VCFQ----------------SM 718
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + TP +QV+Y ILINGLCK+ + A ++++ + ++P
Sbjct: 719 KELKCTP------------------NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ YTT+I L K + +A L+ + +P+ Y A+I G + +A L
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
+E + + T +L+D L K ++ A V V+ G
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A I L++ TP++ + +L +LVK + A+ M+ N VT ILIN
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + + AF ++ K+G +P TI++TT+I GL + A D A G
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 128 DQVSYSIL 135
D Y+ +
Sbjct: 796 DSACYNAM 803
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
IFN L+ PS+I + ++T+L + KH+ + +SL ++E +G+ + + + +IN
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA-QGFRLDQ 129
G + A + K+ + G +P TF TLIKG +++ + + D ++ + + +
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
+ +IL + + ++ A + + G + D V+++ L ++G T A
Sbjct: 461 RTCNILVQAWCNQ----RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 190 LL--RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ R + K V+P+V TI++ C++ + +A + M + PN+F + +LI G
Sbjct: 517 MIIPRMLHNK-VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
F + + E++D M + PD TF+ L++ + V
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN---------------------AWSSV 614
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G +K E+ +M+ IDPD + FSIL G + G+ + A+ +L M K GV+PNVV Y
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 368 NSLMDGHCLVSEVNKA 383
++ G C E+ KA
Sbjct: 675 TQIISGWCSAGEMKKA 690
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 125/253 (49%), Gaps = 16/253 (6%)
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
Q A + ++ +G + ++Y+ L+ L + L L+ K+E ++PD +++ I
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN- 268
I++ + + A ++ +M P T+ LI G+ +G+L+E++ LLD M+
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEAT 314
+ P+ T NILV C + K++ A N++ M YG + +G A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 315 EL-LDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
++ + M+ + P+ T +V+G C+EGK++ A M + GV PN+ +NSL+ G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 374 HCLVSEVNKAKDI 386
+++++ ++
Sbjct: 576 FLNINDMDGVGEV 588
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D S + L+NGL + G+ + A + + + +P ++ YTT++ +L + K +L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
S++ + P+ + A+I G L +A ++ ++M P A TFN L+ G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK- 436
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN-IDPDAYTFSILVDGLCKEGKV 345
+G+L+E++ LLD M+ + P+ T +ILV C + K+
Sbjct: 437 --------------------IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ A N++ M GVKP+VVT+N+L + + A+D+
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 135/312 (43%), Gaps = 27/312 (8%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS-VLAKILKK 88
++ + + A ++ ++M+S G+ ++VT + L Y +G A ++ ++L
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
+P+ T T++ G C +++ AL+F + G + ++ L F ++
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF----LNIND 581
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+ + D + G + D V++S L+N +G K ++ + + PD+ ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT-K 267
+ + A + ++M + PNV YT +I G+C G++K+A ++ +M
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
+ P+ T+ L I+GF Q +A ELL +M KN+ P
Sbjct: 702 GLSPNLTTYETL---------------------IWGFGEAKQPWKAEELLKDMEGKNVVP 740
Query: 328 DAYTFSILVDGL 339
T ++ DG
Sbjct: 741 TRKTMQLIADGW 752
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ F R+ P++ F ++ + + + ME G+ ++VT S L+N
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ +G + + +L+ G PD F+ L KG + ++A Q L
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI----------L 659
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+Q+ KF G R + V Y+ +I+G C G+ K A
Sbjct: 660 NQMR------KF-----------------------GVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 188 LQLLRKIEGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
+Q+ +K+ G + + P++ Y T+I + K A L +M K ++P T +
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 247 GFCIVG 252
G+ +G
Sbjct: 751 GWKSIG 756
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 188/376 (50%), Gaps = 28/376 (7%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ ++ + VK + A+ + +M GI +++ ++ L+N YC ++ A + ++
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
++G PD + F+ +++ C N ++++A++F+ + + R+ S+L + +
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY--MRMKSVRI--APSSVLVHTMIQGCLKA 428
Query: 147 TPVQRALQFHDD----VVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD 202
+ AL+ +D +A GF +++ L+ CK G+ A L+ +E K ++P+
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKI---FLL--FCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
VV Y ++ + C+ K + A +++SEM+ K + PN FTY+ LI GF + A ++++
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYGFCIV 307
+M N + + +N +++GLCK G+ AK +L + +I GF V
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G A E EM P+ TF+ L++G CK ++ A + M +K ++ Y
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 368 NSLMDGHCLVSEVNKA 383
+L+DG C +++ A
Sbjct: 664 GALIDGFCKKNDMKTA 679
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 53/388 (13%)
Query: 28 GKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILK 87
KI K A S ME GI N+V + ++ +C + + A S+ +++L+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 88 KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT----------- 136
KG +P+ T++ LI G N Q A + + A F ++V Y+ +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 137 --------LKFSRRVISPTP-------------VQRALQFHDDVVAQGFRLDQVSYSILI 175
+K R +S T A++ + ++ G + V+++ LI
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
NG CK + AL++ +++ ++ D+ Y +ID CK + A+ L+SE+ ++
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
PNV Y +LI GF +G++ A +L +MV I D +T+ ++DGL K+G +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN----- 747
Query: 296 LGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
A++L E++ I PD +LV+GL K+G+ A +L M
Sbjct: 748 ----------------LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
K+ V PNV+ Y++++ GH +N+A
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 187/395 (47%), Gaps = 22/395 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV F ++ P + +L+SLV+ A + ++M G+ + VT+ +L+
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ-GFR 126
+ A + +++ +G +PD + F+ ++ C + AL ++ + G
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVP 307
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
Q +Y+ + + F + ++ A++ D++V G + ++ + L+NG CK +
Sbjct: 308 ASQETYTSVIVAF----VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
AL L ++E + + PD VM++ +++ CK+ + A Y M S RI P+ +I
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 247 GFCIVGQLKEAT-ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
G C+ + EA E+ ++ I + N + CK+GKV A + L +M
Sbjct: 424 G-CLKAESPEAALEIFNDSFESWI-AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
M+ C + + A + EM+ K ++P+ +T+SIL+DG K + A +V
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ M + N V YN++++G C V + +KAK++
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 166/380 (43%), Gaps = 27/380 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + R+ PS + ++ +K + A+ + + S I + + I +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL- 457
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G++ A S L + +KG +P+ + + ++ C + A +++ +G
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +YSIL F + Q A + + A F ++V Y+ +INGLCK+GQT A
Sbjct: 518 NNFTYSILIDGFFKN----KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 188 LQLLRK-IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
++L+ I+ K Y +IID K A Y EM PNV T+T+LI
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
GFC ++ A E+ EM + + D + L+DG CK+
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN------------------- 674
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+K A L E+ + P+ ++ L+ G GK+ A ++ M+ G+ ++ T
Sbjct: 675 --DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT 732
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
Y +++DG +N A D+
Sbjct: 733 YTTMIDGLLKDGNINLASDL 752
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 172/371 (46%), Gaps = 26/371 (7%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+ LA IF+ +L P+ + ++ K K A + +QM +S +N V +
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 65 LINCYCHLGQIPFAFSVLAKILK-KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+IN C +GQ A +L ++K K Y ++ ++I G A++ + ++
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + V+++ L F + + AL+ ++ + +LD +Y LI+G CK
Sbjct: 620 GKSPNVVTFTSLINGFCKS----NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K A L ++ + P+V +Y ++I + A +LY +MV+ I ++FTYT
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
+I G G + A++L E++ I PD +LV+GL K+
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK----------------- 778
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
GQ +A+++L+EM K++ P+ +S ++ G +EG + A + M+++G+ +
Sbjct: 779 ----GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 364 VVTYNSLMDGH 374
+N L+ G
Sbjct: 835 DTVFNLLVSGR 845
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 108/236 (45%), Gaps = 15/236 (6%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
GF L +++ L+N + + A+ + + V P V ++ SL + L+ +A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+Y++MV + + T L+ + +EA ++ ++++ +PD F++ V
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 283 LCKEGKVKGAKNVLGVM---------------MIYGFCIVGQLKEATELLDEMVTKNIDP 327
CK + A ++L M +I F G ++EA ++DEMV I
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ LV+G CK ++ A ++ M ++G+ P+ V ++ +++ C E+ KA
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 14/202 (6%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
++ DVV+ T I+D LCKD +A NL++EM K I PNV TY +I FC G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGF 304
+LL M+ K I+PD TF+ L++ KE KV A+ + M MI GF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C ++ +A +LD M +K PD TFS L++G CK +V + M ++G+ N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
VTY +L+ G C V +++ A+D+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDL 207
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 14/203 (6%)
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
++Y+ +I+ C G+ A QLLR + K + PD+V ++ +I++ K++ V++A +Y E
Sbjct: 46 LTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKE 105
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M+ I P TY ++I GFC ++ +A +LD M +K PD TF+ L++G CK +
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 289 VKG--------------AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
V A V +I+GFC VG L A +LL+EM++ + PD TF
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 335 LVDGLCKEGKVKGAKNVLGVMMK 357
++ GLC + +++ A +L + K
Sbjct: 226 MLAGLCSKKELRKAFAILEDLQK 248
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 39/280 (13%)
Query: 17 RTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP 76
++H ++ I+ L K ++ A +L +M GI N++T + +I+ +CH G+
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
A +L +++K PD +TF+ LI +V A + + +++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML--------------- 107
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
R I PT + +Y+ +I+G CK + A ++L +
Sbjct: 108 ----RWSIFPTTI--------------------TYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
K PDVV ++T+I+ CK K V + ++ EM + I+ N TYT LI+GFC VG L
Sbjct: 144 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
A +LL+EM++ + PD TF+ ++ GLC + +++ A +L
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M I +V TA++ C G A L EM K I P+ T+N ++D C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
A +L M +I F ++ EA E+ EM+ +I P T++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++DG CK+ +V AK +L M +G P+VVT+++L++G+C V+ +I
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ ++ P I+ F ++ + VK + A + +M I +T + +I+ +C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ A +L + KG PD +TF+TLI G C +V ++
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME--------------- 171
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+ + RR G + V+Y+ LI+G C++G A L
Sbjct: 172 ----IFCEMHRR--------------------GIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
L ++ V PD + + ++ LC K + AF + ++
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 30/379 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
++ +F ++ P + +L SLVK + T + +M G+++N+ ++L++
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
G A +L+++ +KG PD T+ TLI C + AL D + G
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP 271
Query: 128 DQVSYSILTLKFSR--RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
+ V+Y+ FSR R+ T + R ++ DDV A + V+Y+ LI+G C+M
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFREIK--DDVTA-----NHVTYTTLIDGYCRMNDID 324
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
AL+L +E + P VV Y +I+ LC+D + +A L +EM K+I P+ T LI
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFC 305
+C + + A ++ +M+ + D Y++ L I+GFC
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL---------------------IHGFC 423
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
V +L+ A E L M+ K P T+S LVDG + K +L K+G+ +V
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 366 TYNSLMDGHCLVSEVNKAK 384
Y L+ C + +V+ AK
Sbjct: 484 LYRGLIRRICKLEQVDYAK 502
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 41/397 (10%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISN-MVTSS 63
L + FI+ L + S+ K++ L K KH+ TA L ++ ++S+ +V S
Sbjct: 62 LSWSFFIWTDSLPS-SKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRS 120
Query: 64 ILINCYCHLGQIPFAFSVLA-KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
++ + FS L K G D+I I+ L +Q + +V
Sbjct: 121 LVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
Q RL + I V++ V Y++L++ K G
Sbjct: 181 Q--RLTDTVWKIFKKMVKLGVVANIHV---------------------YNVLVHACSKSG 217
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A +LL ++E K V PD+ Y T+I CK + +A ++ M + PN+ TY
Sbjct: 218 DPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
+ I+GF G+++EAT L E + ++ + T+ L+DG C+ + A + VM
Sbjct: 278 SFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR 336
Query: 303 GF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
GF C G+++EA LL EM K I+PD T + L++ CK + A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
V M++ G+K ++ +Y +L+ G C V E+ AK+
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 157/302 (51%), Gaps = 29/302 (9%)
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL--TLKFSR 141
K++K G +PD +T ++L+ G CL+ ++ A+ + G + D V +IL TL +R
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
V+ P L+ D +G + V+YS LI GLCK G+ A + L +++ K + P
Sbjct: 63 LVV---PALEVLKRMKD---RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+V+ ++ +ID+ K ++ ++Y M+ I PNVFTY++LIYG C+ ++ EA ++L
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
D M++K P+ T++ L +G K +V + +LLD+M
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRV---------------------DDGIKLLDDMP 215
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ + + + + L+ G + GK+ A V G M G+ PN+ +YN ++ G EV
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275
Query: 382 KA 383
KA
Sbjct: 276 KA 277
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 174/364 (47%), Gaps = 19/364 (5%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
++++ P I+ ++ A+ ++ QME GI ++V +ILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+ A VL ++ +G P+ +T+++LI GLC + ++ A + ++ ++ + +++S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
L +++R + + + ++ + +YS LI GLC + A+++L
Sbjct: 123 ALIDAYAKR----GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
+ K P+VV Y+T+ + K V D L +M + + N + LI G+ G+
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----------KNVLGV----M 299
+ A + M + + P+ ++NI++ GL G+V+ A +N L + +
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
MI+G C +KEA +L ++ K ++PD ++I++ L + G ++ + L ++
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-MRTEADALNRFYQKH 357
Query: 360 VKPN 363
V+ N
Sbjct: 358 VRQN 361
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + R+ +P+++ + ++T L K A H+M+S I N++T S LI+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y G++ SV +++ P+ T+++LI GLC++ +V A++ D ++++G
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V+YS L F + V ++ DD+ +G + VS + LI G + G+ A
Sbjct: 187 NVVTYSTLANGF----FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L + + + P++ Y ++ L + V A + + M R ++ TYT +I+G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
C +KEA +L ++ K ++PD + I++ L + G
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
+M+ I P++ T ++L+ GFC+ +K+A + +M I D IL+D LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK-- 60
Query: 288 KVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
N L V A E+L M + I P+ T+S L+ GLCK G++
Sbjct: 61 ------NRLVV-------------PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD 101
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A+ L M + + PNV+T+++L+D + +++K +
Sbjct: 102 AERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 140
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 27/372 (7%)
Query: 31 LTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGY 90
+ SL K ++ A +L G++ +++T + LI Y I A++V ++ + G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT---LKFSRRVISPT 147
+PD T+ +LI G N + R LQ D+++ G D SY+ L K R
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH----- 134
Query: 148 PVQRALQ-FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
A + H+D+ G +Y+IL++ LCK G T A++L + ++ + V+P+++ Y
Sbjct: 135 --GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTY 191
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+I+ LCK + V + E+ PN TYT ++ + ++++ +L +M
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG---------------FCIVGQLK 311
+ D + +V L K G+ + A + ++ G + G L
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+LL+E+ K + PD YT +I+V+GL G GA+ L + + G++P+VVT N L+
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLI 371
Query: 372 DGHCLVSEVNKA 383
DG C V++A
Sbjct: 372 DGLCKAGHVDRA 383
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 161/354 (45%), Gaps = 34/354 (9%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQ-MESSGIISNMVTSSILINCY 69
+F+ +L + +P + + +++ K+ + A + H+ + +G++ + T +IL++
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G A L K LK +P+ +T+ LI GLC + +V ++ G+ +
Sbjct: 165 CKSGHTDNAIE-LFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 130 VSYS-ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
V+Y+ +L + F + I ++ LQ + +G+ D + +++ L K G+ + A
Sbjct: 224 VTYTTMLKMYFKTKRI-----EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 189 QLLRK-IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ + + + D+V Y T+++ KD + +L E+ K + P+ +T+T ++ G
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
+G A + L + + P T N L+DGLCK G V A + M +
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV------ 392
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
D +T++ +V LCK+G++ A +L +G+K
Sbjct: 393 -------------------RDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMK 427
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 27/338 (7%)
Query: 35 VKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDT 94
VK A L +M GI S++ + LI+ C G + AF + ++ +KG P +
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 95 ITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ 154
T+ LI G+C ++ A +++ ++G + QV ++ L + R+ + V A
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM----VDEASM 420
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ-LLRKIEGKLVQPDVVMYTTIIDSL 213
+D + +GF+ D + + + + ++ + A Q L R +EG V+ V YT +ID
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG-VKLSTVSYTNLIDVY 479
Query: 214 CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
CK+ V +A L+ EM SK + PN TY +IY +C G++KEA +L M +DPD+
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
YT+ L I+G CI + EA L EM K +D ++ T++
Sbjct: 540 YTYTSL---------------------IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+++ GL K GK A + M ++G + Y +L+
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 55/360 (15%)
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY- 132
+I + +++ G + + T +++GLC +V+++ + + +G + + +Y
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+I+ +R S + D VV ++V+Y++L+ K G+ A +L
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVV-----YNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
++ + ++ DV +YT++I C+ + AF L+ E+ K + P+ +TY ALI G C VG
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF-------- 304
++ A L++EM +K ++ FN L+DG C++G V A + VM GF
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 305 -----------------------------------------CIVGQLKEATELLDEMVTK 323
C G ++EA L EM +K
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ P+A T+++++ CK+GK+K A+ + M G+ P+ TY SL+ G C+ V++A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 18/381 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
L + IF R++ + ++ ++ L + + L + GI T + +I
Sbjct: 207 LCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTII 266
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
N Y VL + K G + +T+T L++ N ++ A + D++ +G
Sbjct: 267 NAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE 326
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D Y+ L R+ ++RA D++ +G +Y LI+G+CK+G+
Sbjct: 327 SDVHVYTSLISWNCRK----GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A L+ +++ K V V++ T+ID C+ +V +A +Y M K +VFT +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------GV-- 298
F + + EA + L M+ + ++ L+D CKEG V+ AK + GV
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 299 ------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+MIY +C G++KEA +L M +DPD+YT++ L+ G C V A +
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Query: 353 GVMMKQGVKPNVVTYNSLMDG 373
M +G+ N VTY ++ G
Sbjct: 563 SEMGLKGLDQNSVTYTVMISG 583
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 10/275 (3%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
++ A +F+ L +PS +G ++ + K+ A L ++M+S G+ V +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLN--AQVQRALQFHDDVVA 122
LI+ YC G + A + + +KG+Q D T T+ C N + A Q+ ++
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS--CFNRLKRYDEAKQWLFRMME 462
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
G +L VSY+ L + + V+ A + ++ ++G + + ++Y+++I CK G
Sbjct: 463 GGVKLSTVSYTNLIDVYCK----EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ K A +L +E + PD YT++I C V +A L+SEM K + N TYT
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKN--IDPDAYT 275
+I G G+ EA L DEM K ID YT
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 14/248 (5%)
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
+ L+ D +V +G +D+ S + + K + L++ R++ V+ V T +
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
++ LC+ V + L E K I P +TY +I + +L M +
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLKEATE 315
+ T+ +L++ K GK+ A+ + M G C G +K A
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
L DE+ K + P +YT+ L+DG+CK G++ A+ ++ M +GV V +N+L+DG+C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 376 LVSEVNKA 383
V++A
Sbjct: 411 RKGMVDEA 418
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 176/382 (46%), Gaps = 33/382 (8%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH-LGQI--PF-AFSVL 82
FG ++ LV + A L +M+ I N V S ++ C G++ PF + V
Sbjct: 54 FGYMVLRLVSANKFKAAEDLIVRMK----IENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR 142
K+ P + T++ L Q+ A +F+ ++ G S ++L R
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCR- 168
Query: 143 VISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD 202
+ V L+ ++ +G D +Y LI+GLC+ G+ A +L ++ K P
Sbjct: 169 --NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
VV YT++I+ LC K V +A EM SK I PNVFTY++L+ G C G+ +A EL +
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVG 308
M+ + P+ T+ L+ GLCKE K++ A +L M +I GFC +
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSI-------LVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+ +EA LDEM+ I P+ T++I +V GLC + L M +G+
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLS-MRSRGIS 405
Query: 362 PNVVTYNSLMDGHCLVSEVNKA 383
V T SL+ C E KA
Sbjct: 406 VEVETLESLVKCLCKKGEFQKA 427
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 28/314 (8%)
Query: 94 TITFTTLIKGLCLNAQVQRALQFHDDVVAQ---GFRLDQVSYSILTLKFSRRVISPTPVQ 150
IT + +IK + V++++ D A+ G+ DQ S+ + L R++S +
Sbjct: 13 NITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVL----RLVSANKFK 68
Query: 151 RALQFHDDVVAQGFRLDQVSYSILIN---GLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
A D +V VS IL++ G ++ + +L++ K++ P Y
Sbjct: 69 AA---EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYV 125
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV-GQLKEATELLDEMVT 266
T++ L ++ + AF Y M + P V + LI C G + ++ EM
Sbjct: 126 TVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKE 312
+ DPD+YT+ L+ GLC+ G++ AK + M +I G C + E
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A L+EM +K I+P+ +T+S L+DGLCK+G+ A + +MM +G +PN+VTY +L+
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 373 GHCLVSEVNKAKDI 386
G C ++ +A ++
Sbjct: 306 GLCKEQKIQEAVEL 319
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 12/277 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
IF + + P +G +++ L + A L +M +VT + LIN C
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A L ++ KG +P+ T+++L+ GLC + + +A++ + ++A+G R + V
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ L + +Q A++ D + QG + D Y +I+G C + + + A
Sbjct: 299 TYTTLITGLCKE----QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 191 LRKIEGKLVQPDVVMY-------TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
L ++ + P+ + + ++ LC + + AF LY M S+ I V T +
Sbjct: 355 LDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVETLES 413
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
L+ C G+ ++A +L+DE+VT P T+ +L+
Sbjct: 414 LVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 19/387 (4%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
AV F +++ P ++ + ++ L + A+ + + M SG+ + + L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 67 NCYCHLGQIPFAFSVLAKILKKGY-QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
CH ++ A+ ++A+ +K + T+ + LI G C ++++A + G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
D V+Y++L + ++RA ++V G +LD SY+ L+ C++
Sbjct: 252 EPDLVTYNVLLNYY----YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
+ K DVV Y+T+I++ C+ A+ L+ EM K ++ NV TYT+LI
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
F G A +LLD+M + PD + ++D LCK G V A V M
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+I G C G++ EA +L ++M K PD TF ++ GL + K+ A V
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVS 378
MM +G + ++L+ C +S
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 172/376 (45%), Gaps = 27/376 (7%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ + ++ L K+K + +L ME+ G I ++ ++ ++ C ++ FA ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
++G +PD +++T LI GL +V A++ + ++ G D + + L + +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVG----LCHA 197
Query: 147 TPVQRALQF-HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
V A + +++ + +L V Y+ LI+G CK G+ + A L + +PD+V
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y +++ + ++ A + +EMV I + ++Y L+ C V + +
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM---- 313
Query: 266 TKNIDP----DAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
K ++P D +++ L++ C+ + A + M +I F
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G A +LLD+M + PD ++ ++D LCK G V A V M++ + P+ ++Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 368 NSLMDGHCLVSEVNKA 383
NSL+ G C V +A
Sbjct: 434 NSLISGLCRSGRVTEA 449
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 95 ITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ 154
+ + + I L + + A+Q D++ +R+ Y+ +F ++ + + A
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYN----RFIGVLVRESRFELAEA 65
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
+ D+ GF L +YS I+GLCK+ + LL +E PD+ + +D LC
Sbjct: 66 IYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
++ V A + MV + P+V +YT LI G G++ +A E+ + M+ + PD
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 275 TFNILVDGLCKEGKV-----------KGAKNVLGVM----MIYGFCIVGQLKEATELLDE 319
LV GLC KV K A+ L + +I GFC G++++A L
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
M +PD T+++L++ +K A+ V+ M++ G++ + +YN L+ HC VS
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 380 VNK 382
+K
Sbjct: 306 PDK 308
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 19/391 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F+ + + ++ + + LV+ + A ++ M+ G T S I+
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C + + ++L+ + G+ PD F + LC +V A+Q +V +G
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D VSY+IL R V A++ + ++ G D + + L+ GLC + A
Sbjct: 148 DVVSYTILINGLFR----AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 188 LQLL-RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
+++ +I+ V+ V+Y +I CK + A L S M P++ TY L+
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC-------------KEGKVKGAK 293
+ LK A ++ EMV I DAY++N L+ C KE + +G
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 294 NVLGV-MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+V+ +I FC ++A L +EM K + + T++ L+ +EG AK +L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M + G+ P+ + Y +++D C V+KA
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
+++Y I L K G A+Q+ ++ + Y I L ++ A +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 228 EM--VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
+M + ++P FTY+ I G C V + LL +M T PD + FN+ +D LC+
Sbjct: 69 DMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 286 EGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
E KV A M +I G G++ +A E+ + M+ + PD
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQG-VKPNVVTYNSLMDGHCLVSEVNKAK 384
+ LV GLC KV A ++ +K VK + V YN+L+ G C + KA+
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
Y + I G + A ++ DEM + ++ +N + L +E + + A+ + M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 300 --------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
I G C V + LL +M T PD + F++ +D LC+E KV
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A M+++G +P+VV+Y L++G +V A +I
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+S R A +F + + +++ + ++ + ++ + A L QM G+ + +
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ +++ C G + A+ V +++ PD I++ +LI GLC + +V A++ +D+
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+ D++++ + +I + A + D ++ +GF LD+ LI C M
Sbjct: 458 GKECCPDELTFKFIIGG----LIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 175/373 (46%), Gaps = 25/373 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F RL TP+++ +G ++ K+ A+ +S M+ G+ N+ T S++IN +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
L AF+V ++K+G +PD I + +I C + RA+Q ++ R
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
++ + +++ ++R+L+ D + G +++ LINGL + Q + A+++
Sbjct: 591 TFMPIIHGYAK----SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
L ++ V + YT I+ AF ++ + ++ + ++FTY AL+ C
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
G+++ A + EM +NI +++ +NIL+DG + G V
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV--------------------- 745
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
EA +L+ +M + + PD +T++ + K G + A + M GVKPN+ TY +L
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 371 MDGHCLVSEVNKA 383
+ G S KA
Sbjct: 806 IKGWARASLPEKA 818
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 176/390 (45%), Gaps = 18/390 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A + F+ R H T + +GKI+ + + + A +L +ME GI + + +++
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + V ++ + G+ P +T+ LI ++ +AL+ + +G +
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +YS++ F + A +D+V +G + D + Y+ +I+ C MG A
Sbjct: 518 NLKTYSMMINGF----VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+Q +++++ +P + II K + + ++ M +P V T+ LI G
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--- 304
Q+++A E+LDEM + + +T+ ++ G G A + G
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 305 -----------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
C G+++ A + EM +NI +++ ++IL+DG + G V A +++
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
M K+GVKP++ TY S + ++N+A
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 181/435 (41%), Gaps = 61/435 (14%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKM----KHYPTAISLSHQMESSGIISNMV 60
+ A F R+ TP+ +I TSL+ + A+S +M+ GI ++V
Sbjct: 325 MHRARETFERMRARGITPT----SRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLV 380
Query: 61 TSSILINCYCHLGQIPFA---------------FSVLAKIL------------------- 86
T S+++ + G A S+ KI+
Sbjct: 381 TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM 440
Query: 87 -KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
++G + T++ G + A ++ L + GF V+Y L +++
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTK---- 496
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
+ +AL+ + +G + + +YS++ING K+ A + + + ++PDV++
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y II + C + A EM R P T+ +I+G+ G ++ + E+ D M
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLK 311
P +TFN L++GL ++ +++ A +L M ++ G+ VG
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+A E + + +D D +T+ L+ CK G+++ A V M + + N YN L+
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 372 DGHCLVSEVNKAKDI 386
DG +V +A D+
Sbjct: 737 DGWARRGDVWEAADL 751
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S +R ++ +F+ + R P++ F ++ LV+ + A+ + +M +G+ +N T
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ ++ Y +G AF ++ +G D T+ L+K C + ++Q AL ++
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
A+ + Y+IL ++RR V A + +G + D +Y+ I+ K
Sbjct: 722 ARNIPRNSFVYNILIDGWARR----GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G A Q + ++E V+P++ YTT+I + L A + Y EM + I P+ Y
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
C LL ++++ +AY ++ ++ +CKE G +G +
Sbjct: 838 ------HC----------LLTSLLSRASIAEAYIYSGVMT-ICKEMVEAGLIVDMGTAVH 880
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPD 328
+ C+ +++ + L E + K PD
Sbjct: 881 WSKCLC-KIEASGGELTETLQKTFPPD 906
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 45/365 (12%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+++ Y G + A ++ +G P + +T+LI + + AL + +
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 124 GFRLDQVSYSILTLKFSR--------------RVISPT-----------------PVQRA 152
G + V+YS++ FS+ + I T ++RA
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
++ +G Y +++G + K L + ++++ P VV Y +I+
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
K ++ A + M + + N+ TY+ +I GF + A + ++MV + + PD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLD 318
+N ++ C G + A + M +I+G+ G ++ + E+ D
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
M P +TF+ L++GL ++ +++ A +L M GV N TY +M G+ V
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 379 EVNKA 383
+ KA
Sbjct: 674 DTGKA 678
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
+ + +++ + G A + ++ + + P +YT++I + + + +A +
Sbjct: 309 RTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM--VTKNIDPDAY---------TF 276
+M + I ++ TY+ ++ GF G + A DE + K ++ Y T
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 277 NI-LVDGLCKEGKVKGAKNVLGV--MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
N+ + L +E + +G + + M+ G+ +V K+ + + P T+
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
L++ K GK+ A V VM ++GVK N+ TY+ +++G
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 178/375 (47%), Gaps = 24/375 (6%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
++++ ++ P++ + ++ LV +A + MES I ++VT + +I
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
YC GQ A L + +G++ D IT+ T+I+ ++ + + ++ +G ++
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 129 QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
++S++ + + ++++ +G + + Y++LI+G K G + A+
Sbjct: 327 PHAFSLVIGGLCKE----GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+LL ++ + +PDVV Y+ +++ LCK+ V +A + + + N Y++LI G
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG 308
G++ EA L +EM K D+Y +N L+D K KV A + M
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM--------- 493
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
E E D+ V YT++IL+ G+ KE + + A + +M+ +G+ P +
Sbjct: 494 ---EEEEGCDQTV--------YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 369 SLMDGHCLVSEVNKA 383
+L G CL +V +A
Sbjct: 543 ALSTGLCLSGKVARA 557
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 18/320 (5%)
Query: 40 YPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTT 99
+ + ++L +M+ GI S++I C G++ ++V +++KG +P+ +T
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 100 LIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV 159
LI G + V+ A++ ++ +GF+ D V+YS++ + V+ AL +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN----GRVEEALDYFHTC 423
Query: 160 VAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLV 219
G ++ + YS LI+GL K G+ A +L ++ K D Y +ID+ K + V
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 220 TDAFNLYSEMVSKRILPN-VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
+A L+ M + V+TYT L+ G + +EA +L D M+ K I P A F
Sbjct: 484 DEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 543
Query: 279 LVDGLCKEGKVKGAKNVL------GVM-------MIYGFCIVGQLKEATELLDEMVTKNI 325
L GLC GKV A +L GV+ MI C G++KEA +L D + +
Sbjct: 544 LSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGR 603
Query: 326 DPDAYTFSILVDGLCKEGKV 345
+ +++++ L K GK
Sbjct: 604 EVPGRIRTVMINALRKVGKA 623
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 19/328 (5%)
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
++ LI + LG + V K+ + G +P T+ L+ GL V A + + +
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+ + D V+Y+ + + + Q+A++ D+ +G D+++Y +I
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCK----AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+ L ++++ K +Q ++ +I LCK+ + + + ++ M+ K PNV
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM 300
YT LI G+ G +++A LL M+ + PD T++++V+GLCK G+V+ A +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 301 IYGFCI--------------VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
G I G++ EA L +EM K D+Y ++ L+D K KV
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 347 GAKNVLGVM-MKQGVKPNVVTYNSLMDG 373
A + M ++G V TY L+ G
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSG 512
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D V+Y+ +I G CK GQT+ A++ LR +E + + D + Y T+I + D LY
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
EM K I ++ +I G C G+L E + + M+ K P+ + +L+DG K
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
G V+ +A LL M+ + PD T+S++V+GLCK G+V+
Sbjct: 376 GSVE---------------------DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
A + G+ N + Y+SL+DG V++A+
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 14/226 (6%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
LI K+G + L + RK++ ++P + Y +++ L V A ++ M S R
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD--------GLC- 284
I P++ TY +I G+C GQ ++A E L +M T+ + D T+ ++ G C
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 285 ---KEGKVKGAKNVLGV--MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+E KG + ++I G C G+L E + + M+ K P+ +++L+DG
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
K G V+ A +L M+ +G KP+VVTY+ +++G C V +A D
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 189/380 (49%), Gaps = 21/380 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQME--SSGIIS-NMVTSSI 64
A+ +F R+L+ P+++ F ++ K A+ L +M S +S N VT +
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+IN +C G++ A + ++K G + T+ L+ AL+ D++ ++G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 125 FRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
++ V Y SI+ F ++ A+ D+ ++ ++D+ + +I++ GLC+ G
Sbjct: 357 LVVNTVIYNSIVYWLFM-----EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K A++ R+I K + D+V + T++ +DK + A + M+ + + + ++
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
LI G+ G+L+ A E+ D M+ N + +N +V+GL K G A+ V+ M I
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD 531
Query: 304 FCI----------VGQLKEATELLDEMVTKNIDPDA--YTFSILVDGLCKEGKVKGAKNV 351
G ++EA ++L +M ++ + TF+I+++ LCK G + AK V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 352 LGVMMKQGVKPNVVTYNSLM 371
L M+++GV P+ +TY +L+
Sbjct: 592 LKFMVERGVVPDSITYGTLI 611
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 181/375 (48%), Gaps = 19/375 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKI- 85
F ++ S K A+S+ ++M G+ N+V+ +++I+ C G + FA +L K+
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 86 LKKG--YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
+ G P+ +T+ ++I G C ++ A + D+V G ++ +Y L + R
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR-- 338
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
AL+ D++ ++G ++ V Y+ ++ L G + A+ +LR + K +Q D
Sbjct: 339 --AGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
++ LC++ V +A ++ K+++ ++ + L++ F +L A ++L
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM---------IYGFCIVGQLKEAT 314
M+ + + DA +F L+DG KEGK++ A + M+ IY + G K
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 315 ELLDEMVTKNID-PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV--VTYNSLM 371
E V ++ D T++ L++ K G V+ A ++L M KQ + +V VT+N ++
Sbjct: 517 AGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 372 DGHCLVSEVNKAKDI 386
+ C KAK++
Sbjct: 577 NHLCKFGSYEKAKEV 591
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 58/343 (16%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+M+S G + N+ T +++I +C ++ A SV ++LK G P+ ++F +I G C
Sbjct: 208 EMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTG 267
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
++ ALQ L ++ S +SP +
Sbjct: 268 DMRFALQL----------LGKMGM------MSGNFVSP--------------------NA 291
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV----VMYTTIIDSLCKDKLVTDAFN 224
V+Y+ +ING CK G+ L L +I G +V+ V Y ++D+ + +A
Sbjct: 292 VTYNSVINGFCKAGR----LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
L EM SK ++ N Y +++Y + G ++ A +L +M +KN+ D +T I+V GLC
Sbjct: 348 LCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Query: 285 KEGKVKGAKN--------------VLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAY 330
+ G VK A V +++ F +L A ++L M+ + + DA
Sbjct: 408 RNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAI 467
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+F L+DG KEGK++ A + M+K N+V YNS+++G
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 156/331 (47%), Gaps = 21/331 (6%)
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
G A+ V+ + +G+ + L ++ R + + ++ + G+ + ++
Sbjct: 162 GDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+++ F + + + AL ++ G + VS++++I+G CK G + ALQLL
Sbjct: 222 NLVIYSFCK----ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 193 KI---EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
K+ G V P+ V Y ++I+ CK + A + +MV + N TY AL+ +
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------- 299
G EA L DEM +K + + +N +V L EG ++GA +VL M
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 300 ----MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
++ G C G +KEA E ++ K + D + L+ ++ K+ A +LG M
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ QG+ + +++ +L+DG+ ++ +A +I
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEI 488
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
+ L+ + G + A +++ + + V + L + + +Y EM
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
S + NV T+ +IY FC +L EA + M+ + P+ +FN+++DG CK G ++
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 291 GAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
A +LG M + M + P+A T++ +++G CK G++ A+
Sbjct: 271 FALQLLGKMGM------------------MSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ G M+K GV N TY +L+D + ++A
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ L + + A+ Q+ ++ ++V + L++ + ++ A +L +L +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR------- 142
D I+F TLI G +++RAL+ +D ++ + V Y+ + S+R
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 143 -VISPTPVQRALQFH---------------DDVVAQGFRLDQ------VSYSILINGLCK 180
V++ ++ + ++ DD++++ + D V+++I+IN LCK
Sbjct: 522 AVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCK 581
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
G + A ++L+ + + V PD + Y T+I S K + L+ ++ + + P+
Sbjct: 582 FGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHI 641
Query: 241 YTALI 245
Y +++
Sbjct: 642 YLSIV 646
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+++ +C+ ++ A SV+ ++ + G+ D +I C N + AL F D ++ +
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G +++ V S++ + + + +++ +F D LD+V Y++ + L K+G+
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRD----MNIFLDRVCYNVAFDALSKLGR 403
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
+ A +LL++++ + + PDV+ YTT+ID C V DA +L EM+ + P++ TY
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG------ 297
L+ G G +E E+ + M + P+A T +++++GLC KVK A++
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 298 ------------------------------------VMMIYGFCIVGQLKEATELLDEMV 321
+ + + CI G L++A ++L +M
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
++P ++ CK V+ A+ + M+++G+ P++ TY ++ +C ++E+
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 382 KAKDI 386
KA+ +
Sbjct: 644 KAESL 648
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 188/389 (48%), Gaps = 44/389 (11%)
Query: 33 SLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQP 92
+L K+ A L +M+ GI+ +++ + LI+ YC G++ A ++ +++ G P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT--LKFSRRVISPTPVQ 150
D IT+ L+ GL N + L+ ++ + A+G + + V+ S++ L F+R+V
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 151 RALQ----------------------FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
+L+ + V + L + Y L LC G + A
Sbjct: 517 SSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 576
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+L+K+ V+P M +I + CK V +A L+ MV + ++P++FTYT +I+ +
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK-EGKVKGAKNVLGVMMIYGFCIV 307
C + +L++A L ++M + I PD T+ +L+D K + + +V G V
Sbjct: 637 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGE--------V 688
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G+ ++A+E+L E I D +++L+D CK ++ A + M+ G++P++V Y
Sbjct: 689 GK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Query: 368 NSLMDGH----------CLVSEVNKAKDI 386
+L+ + LV+E++K +I
Sbjct: 748 TTLISSYFRKGYIDMAVTLVTELSKKYNI 776
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 172/383 (44%), Gaps = 73/383 (19%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH------------------ 71
++ K + P A+ +M G+ N V S+++ CYC
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 72 -----------------LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL 114
LG++ AF +L ++ +G PD I +TTLI G CL +V AL
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSIL 174
D+++ G D ++Y++L +R + L+ ++ + A+G + + V+ S++
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARN----GHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM---VS 231
I GLC + K A +E K + + + C+ L A+ + + +
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQKCPENK----ASFVKGYCEAGLSKKAYKAFVRLEYPLR 555
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
K + Y L + CI G L++A ++L +M ++P +C GK+ G
Sbjct: 556 KSV------YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGR--------SMC--GKMIG 599
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
A FC + ++EA L D MV + + PD +T++I++ C+ +++ A+++
Sbjct: 600 A-----------FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESL 648
Query: 352 LGVMMKQGVKPNVVTYNSLMDGH 374
M ++G+KP+VVTY L+D +
Sbjct: 649 FEDMKQRGIKPDVVTYTVLLDRY 671
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 177/408 (43%), Gaps = 84/408 (20%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
F+ NR+ EFGKI ++L Q++ G+ +N T +I++
Sbjct: 186 FLMNRM---------TEFGKI----------GMLMTLFKQLKQLGLCANEYTYAIVVKAL 226
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF-----------HD 118
C G + A +L + + T I GLC+ + ++A+ D
Sbjct: 227 CRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGD 280
Query: 119 DV------VAQGF--------------RLDQVSYSI---LTLKFSRRVISPTPVQRALQF 155
D+ V +GF ++++ + + L R + AL F
Sbjct: 281 DLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGF 340
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
D ++ +G +++ V S+++ CKM AL+ ++ + D V Y D+L K
Sbjct: 341 LDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
V +AF L EM + I+P+V YT LI G+C+ G++ +A +L+DEM+ + PD T
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+N+LV GL A+N G +E E+ + M + P+A T S++
Sbjct: 461 YNVLVSGL--------ARN-------------GHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++GLC KVK A++ ++Q N ++ + G+C KA
Sbjct: 500 IEGLCFARKVKEAEDFFSS-LEQKCPENKASF---VKGYCEAGLSKKA 543
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 17 RTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP 76
R P S+ GK++ + K+ + A L M G+I ++ T +I+I+ YC L ++
Sbjct: 586 RVEPGRSMC--GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
A S+ + ++G +PD +T+T L L+ ++ + H+ QG
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVL-----LDRYLKLDPEHHETCSVQG------------ 686
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
++A + + A G LD V Y++LI+ CKM + A +L ++
Sbjct: 687 ---------EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
++PD+V YTT+I S + + A L +E+ K +P+
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 153/380 (40%), Gaps = 76/380 (20%)
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLC--------------LNAQVQRALQFHDDVVA 122
A S L ++ + G P+ + TL++ L L +R D +
Sbjct: 72 LALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEV 131
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQV----SYSILINGL 178
G + ++ S + ++ S ++ DV+ Q RLD V + + L+N +
Sbjct: 132 IGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRM 191
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
+ G+ + L ++++ + + Y ++ +LC+ + +A L E S V
Sbjct: 192 TEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES------V 245
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNI---DPDAYTFNILVDGLCKEGKVKGAKNV 295
F Y I G C+ G+ ++A L+ E++ + D ++V G C E K+K A++V
Sbjct: 246 FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESV 305
Query: 296 LGVMMIYGF--------------CIVGQLKEATELLDEMVTK------------------ 323
+ M GF C L EA LD+M+ K
Sbjct: 306 IIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Query: 324 -----------------NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
NI D +++ D L K G+V+ A +L M +G+ P+V+
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
Y +L+DG+CL +V A D+
Sbjct: 426 YTTLIDGYCLQGKVVDALDL 445
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 38/376 (10%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F K L+ MKHY GI ++V ++ I+ C G + A SVL K+
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL--DQVSYSILTLKFSRRVI 144
G D+++ +++I G C + + A++ + FRL + YS F +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIK-----LIHSFRLRPNIFVYS----SFLSNIC 384
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
S + RA ++ G D V Y+ +I+G C +G+T A Q + P +
Sbjct: 385 STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLT 444
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
T +I + + ++DA +++ M ++ + +V TY L++G+ QL + EL+DEM
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQL 310
+ I PD T+NIL+ + G + A ++ ++ I GF G
Sbjct: 505 RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+EA L M + PD T S L+ G CK +++ A + ++ G+KP+VV YN+L
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 371 MDGHCLVSEVNKAKDI 386
+ G+C V ++ KA ++
Sbjct: 625 IHGYCSVGDIEKACEL 640
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 167/366 (45%), Gaps = 21/366 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+ F + L K A S+ +++ GI + V+ S +I+ +C +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ +P+ +++ + +C + RA ++ G D V Y+ + +
Sbjct: 364 IHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC- 419
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +A Q+ ++ G + +ILI + G A + R ++ + ++
Sbjct: 420 ---NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DVV Y ++ K + F L EM S I P+V TY LI+ + G + EA E++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
E++ + P F ++ G K G + A + M +++G+C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
++++A L ++++ + PD ++ L+ G C G ++ A ++G+M+++G+ PN T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 368 NSLMDG 373
++L+ G
Sbjct: 657 HALVLG 662
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 151/323 (46%), Gaps = 27/323 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I + L+++ A ++ ++ G++ + V + +I+ YC+LG+ AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+LK G P T T LI + A ++ +G +LD V+Y+ L + +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + + D++ + G D +Y+ILI+ + G A +++ ++ + P
Sbjct: 491 ----THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ +T +I K +AF L+ M R+ P+V T +AL++G+C ++++A L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
++++ + PD +N L I+G+C VG +++A EL+ MV
Sbjct: 607 NKLLDAGLKPDVVLYNTL---------------------IHGYCSVGDIEKACELIGLMV 645
Query: 322 TKNIDPDAYTFSILVDGLCKEGK 344
+ + P+ T LV GL EGK
Sbjct: 646 QRGMLPNESTHHALVLGL--EGK 666
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 30/321 (9%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
SILI+C ++ A + K+ + G P +L+K + ++ A +F + +++
Sbjct: 205 SILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLS 264
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G L+ ++L+L F R+ S + + + G R D V++++ I+ LCK G
Sbjct: 265 RGRHLNA---AVLSL-FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
K A +L K++ + D V +++ID CK +A L + S R+ PN+F Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYS 377
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
+ + C G + A+ + E+ + PD + ++DG C G+ A G ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL-- 435
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE-GKVKGAKNVLGVMMKQGVK 361
K+ +P + T S ++ G C G + A++V M +G+K
Sbjct: 436 --------------------KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 362 PNVVTYNSLMDGHCLVSEVNK 382
+VVTYN+LM G+ ++NK
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNK 496
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A IF + P + + ++ + A + SG ++ TS+ILI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
G I A SV + +G + D +T+ L+ G Q+ + + D++ + G
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +Y+IL ++ + A + +++ +GF ++++ +I G K G + A
Sbjct: 512 DVATYNILI----HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L + ++PDVV + ++ CK + + A L+++++ + P+V Y LI+G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+C VG +++A EL+ MV + + P+ T + LV GL EGK
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGK 666
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 52/228 (22%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+++ +ID +++ V A L ++ I P+ +L+ V L+ A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 265 VTK-----------------------------------NIDPDAYTFNILVDGLCKEGKV 289
+++ I PD F + +D LCK G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 290 KGAKNVLGVMMIY--------------GFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
K A +VL + ++ GFC VG+ +EA +L+ + P+ + +S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ +C G + A + + + G+ P+ V Y +++DG+C + +KA
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
I + L+R PS + F ++ K + A L M + ++VT S L++ YC
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ A + K+L G +PD + + TLI G C +++A + +V +G ++
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
++ L L + + ++ + +VA+
Sbjct: 655 THHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 38/376 (10%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F K L+ MKHY GI ++V ++ I+ C G + A SVL K+
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL--DQVSYSILTLKFSRRVI 144
G D+++ +++I G C + + A++ + FRL + YS F +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIK-----LIHSFRLRPNIFVYS----SFLSNIC 384
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
S + RA ++ G D V Y+ +I+G C +G+T A Q + P +
Sbjct: 385 STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLT 444
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
T +I + + ++DA +++ M ++ + +V TY L++G+ QL + EL+DEM
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQL 310
+ I PD T+NIL+ + G + A ++ ++ I GF G
Sbjct: 505 RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+EA L M + PD T S L+ G CK +++ A + ++ G+KP+VV YN+L
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 371 MDGHCLVSEVNKAKDI 386
+ G+C V ++ KA ++
Sbjct: 625 IHGYCSVGDIEKACEL 640
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 167/366 (45%), Gaps = 21/366 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+ F + L K A S+ +++ GI + V+ S +I+ +C +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ +P+ +++ + +C + RA ++ G D V Y+ + +
Sbjct: 364 IHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC- 419
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +A Q+ ++ G + +ILI + G A + R ++ + ++
Sbjct: 420 ---NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DVV Y ++ K + F L EM S I P+V TY LI+ + G + EA E++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIV 307
E++ + P F ++ G K G + A + M +++G+C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
++++A L ++++ + PD ++ L+ G C G ++ A ++G+M+++G+ PN T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 368 NSLMDG 373
++L+ G
Sbjct: 657 HALVLG 662
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 151/323 (46%), Gaps = 27/323 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I + L+++ A ++ ++ G++ + V + +I+ YC+LG+ AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+LK G P T T LI + A ++ +G +LD V+Y+ L + +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + + D++ + G D +Y+ILI+ + G A +++ ++ + P
Sbjct: 491 ----THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ +T +I K +AF L+ M R+ P+V T +AL++G+C ++++A L
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
++++ + PD +N L I+G+C VG +++A EL+ MV
Sbjct: 607 NKLLDAGLKPDVVLYNTL---------------------IHGYCSVGDIEKACELIGLMV 645
Query: 322 TKNIDPDAYTFSILVDGLCKEGK 344
+ + P+ T LV GL EGK
Sbjct: 646 QRGMLPNESTHHALVLGL--EGK 666
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 30/321 (9%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
SILI+C ++ A + K+ + G P +L+K + ++ A +F + +++
Sbjct: 205 SILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLS 264
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G L+ ++L+L F R+ S + + + G R D V++++ I+ LCK G
Sbjct: 265 RGRHLNA---AVLSL-FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
K A +L K++ + D V +++ID CK +A L + S R+ PN+F Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYS 377
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
+ + C G + A+ + E+ + PD + ++DG C G+ A G ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL-- 435
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE-GKVKGAKNVLGVMMKQGVK 361
K+ +P + T S ++ G C G + A++V M +G+K
Sbjct: 436 --------------------KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 362 PNVVTYNSLMDGHCLVSEVNK 382
+VVTYN+LM G+ ++NK
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNK 496
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A IF + P + + ++ + A + SG ++ TS+ILI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
G I A SV + +G + D +T+ L+ G Q+ + + D++ + G
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D +Y+IL ++ + A + +++ +GF ++++ +I G K G + A
Sbjct: 512 DVATYNILI----HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L + ++PDVV + ++ CK + + A L+++++ + P+V Y LI+G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+C VG +++A EL+ MV + + P+ T + LV GL EGK
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGK 666
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 52/228 (22%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+++ +ID +++ V A L ++ I P+ +L+ V L+ A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 265 VTK-----------------------------------NIDPDAYTFNILVDGLCKEGKV 289
+++ I PD F + +D LCK G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 290 KGAKNVLGVMMIY--------------GFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
K A +VL + ++ GFC VG+ +EA +L+ + P+ + +S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ +C G + A + + + G+ P+ V Y +++DG+C + +KA
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
I + L+R PS + F ++ K + A L M + ++VT S L++ YC
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
++ A + K+L G +PD + + TLI G C +++A + +V +G ++
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
++ L L + + ++ + +VA+
Sbjct: 655 THHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 39/306 (12%)
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +L ++ K G +P+ + LI C V++A +F + +V + D +Y+I+
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
+ R + P ++A +D+ + + D V+YS+L+N + P L + R++E
Sbjct: 644 TYCR-LNEP---KQAYALFEDMKRRDVKPDVVTYSVLLN-------SDPELDMKREMEAF 692
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
V PDVV YT +I+ C + + L+ +M + I+P+V TYT L+ + K
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-------KNKPE 745
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELL 317
L EM ++ PD + + +L+D CK +G L EA +
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCK---------------------IGDLGEAKRIF 784
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
D+M+ +DPDA ++ L+ CK G +K AK + M++ GVKP+VV Y +L+ G C
Sbjct: 785 DQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Query: 378 SEVNKA 383
V KA
Sbjct: 845 GFVLKA 850
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 16/326 (4%)
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C+ +I A SV+ + K G PD ++ +I+G N + +A+ + ++ + R++
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
V S + + + A + LD+V Y++ + L K+G+ + A++
Sbjct: 362 VIVSSILQCYCQM----GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
L R++ GK + PDV+ YTT+I C +DAF+L EM P++ Y L G
Sbjct: 418 LFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA 477
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------- 299
G +EA E L M + + P T N++++GL G++ A+ +
Sbjct: 478 TNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS 537
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
M+ GFC G L A E + P + F++ ++ + A+++L M K G
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLEFPL--PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLG 595
Query: 360 VKPNVVTYNSLMDGHCLVSEVNKAKD 385
V+P Y L+ C V+ V KA++
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKARE 621
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 41/341 (12%)
Query: 12 FNRLLRTH-PTPSIIEFGKILTSLVKMKHY-PTAISLSHQMESSGIISNMVTSSILINCY 69
F R +R P P + F + TSL K Y A L +M G+ LI +
Sbjct: 552 FERFIRLEFPLPKSVYF-TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAW 610
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C + + A ++ K PD T+T +I C + ++A +D+ + + D
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 130 VSYSILTLKFSRRVISPTP---VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
V+YS+L ++ P ++R ++ D + D V Y+I+IN C + K
Sbjct: 671 VTYSVL--------LNSDPELDMKREMEAFDVIP------DVVYYTIMINRYCHLNDLKK 716
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
L + ++ + + PDVV YT ++ K+K NL EM + + P+VF YT LI
Sbjct: 717 VYALFKDMKRREIVPDVVTYTVLL----KNK---PERNLSREMKAFDVKPDVFYYTVLID 769
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
C +G L EA + D+M+ +DPDA + L+ CK G +K AK + M
Sbjct: 770 WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKP 829
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
+I G C G + +A +L+ EM+ K I P + S
Sbjct: 830 DVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 186/451 (41%), Gaps = 84/451 (18%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +FN++L+ + + IL +M ++ A L + + I + V ++ +
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
LG++ A + ++ KG PD I +TTLI G CL + A ++ G
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y++L + ++ Q A + + +G + V+++++I GL G+ A
Sbjct: 465 DIVIYNVLAGGLATNGLA----QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 188 LQLLRKIEGKLVQPDVVM----------------------------YTTIIDSLCKDK-- 217
+E K + D M Y T+ SLC +K
Sbjct: 521 EAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 218 ----------------------------------LVTDAFNLYSEMVSKRILPNVFTYTA 243
V A + +V+K+I+P++FTYT
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV----- 298
+I +C + + K+A L ++M +++ PD T+++L++ E +K V
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVIPDVV 699
Query: 299 ---MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
+MI +C + LK+ L +M + I PD T+++L+ K K +N+ M
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-------KNKPERNLSREM 752
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
VKP+V Y L+D C + ++ +AK I
Sbjct: 753 KAFDVKPDVFYYTVLIDWQCKIGDLGEAKRI 783
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 169/391 (43%), Gaps = 47/391 (12%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAK 84
I + K++ L A S+ ME GI ++ S +I + IP A V K
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
+LKK + + + +++++ C A + LD+V Y++ +
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL-- 409
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
V+ A++ ++ +G D ++Y+ LI G C G+ A L+ +++G PD+V
Sbjct: 410 --GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+Y + L + L +AF M ++ + P T+ +I G G+L +A + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 265 VTKNIDPDA----------------------------YTFNILVDGLCKEGK-VKGAKNV 295
K+ + DA + L LC E + A+++
Sbjct: 528 EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 296 LGVMM---------IYG-----FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
L M +YG +C V +++A E + +VTK I PD +T++I+++ C+
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+ K A + M ++ VKP+VVTY+ L++
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 185/439 (42%), Gaps = 70/439 (15%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F T+ + + + +L K+ AI L +M GI +++ + LI C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G+ AF ++ ++ G PD + + L GL N Q A + + +G + V
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Query: 131 SYSILTLKFSRRVISPTPVQRALQFH----------DDVVAQGF--------------RL 166
+++++ +I + +A F+ D + +GF RL
Sbjct: 503 THNMVI----EGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRL 558
Query: 167 D----QVSYSILINGLC-KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
+ + Y L LC + A LL ++ V+P+ MY +I + C+ V
Sbjct: 559 EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRK 618
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
A + +V+K+I+P++FTYT +I +C + + K+A L ++M +++ PD T+++L++
Sbjct: 619 AREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Query: 282 GLCKEGKVKGAKNVLGVM--------MIYGFCIVGQLKEATELLDEMVTKNI-------- 325
E +K V+ MI +C + LK+ L +M + I
Sbjct: 679 S-DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 326 --------------------DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
PD + +++L+D CK G + AK + M++ GV P+
Sbjct: 738 VLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAA 797
Query: 366 TYNSLMDGHCLVSEVNKAK 384
Y +L+ C + + +AK
Sbjct: 798 PYTALIACCCKMGYLKEAK 816
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 18/293 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ +R+ + P +GK++ + ++ + A + + I+ ++ T +I+IN YC
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
L + A+++ + ++ +PD +T++ L LN+ + L ++ A D V
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVL-----LNSDPE--LDMKREMEAFDVIPDVV 699
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y+I+ R +++ D+ + D V+Y++L+ + KP L
Sbjct: 700 YYTIMI----NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-------KNKPERNL 748
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
R+++ V+PDV YT +ID CK + +A ++ +M+ + P+ YTALI C
Sbjct: 749 SREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
+G LKEA + D M+ + PD + L+ G C+ G V A ++ M+ G
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
++Y ++ GLC + + A ++ +E + PDV +Y+ II+ K+ + A +++++
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M+ KR N ++++ +C +G EA +L E NI D +N+ D L K GK
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
V+ A + M +I G C+ G+ +A +L+ EM PD +++
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
L GL G + A L +M +GVKP VT+N +++G E++KA+
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F + R P ++ + +L S + + +ME+ +I ++V +I+IN
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
YCHL + +++ + ++ PD +T+T L+K + +R L ++ A +
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-----KPERNLS--REMKAFDVKP 759
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D Y++L + + ++ + A + D ++ G D Y+ LI CKMG K A
Sbjct: 760 DVFYYTVL-IDWQCKI---GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ ++ V+PDVV YT +I C++ V A L EM+ K I P + +A+ Y
Sbjct: 816 KMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYA 875
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 167/397 (42%), Gaps = 43/397 (10%)
Query: 30 ILTSLVKMKHYP-TAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK 88
+L L MK P A+S ++E + + ++ + +I C G + L +++++
Sbjct: 60 VLRVLNSMKDDPYLALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRR 119
Query: 89 GYQPDTITFTTLIKG-------LCLNAQVQRAL-------QFHDDVVAQGFRLDQVSYS- 133
G + + L+K L L +V AL D+ + FR YS
Sbjct: 120 GDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFR---AYYSL 176
Query: 134 -----ILTLKF-SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
I L F R+I+ + F ++ G D +Y +++ L + +
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEEL 236
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV----FTYTA 243
+LL ++ + V Y I+ LC +++ A+ L + IL + Y
Sbjct: 237 EKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRK 296
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--- 300
++ G C ++++A ++ +M IDPD Y ++ +++G K + A +V M+
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 301 -----------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
+ +C +G EA +L E NI D +++ D L K GKV+ A
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ M +G+ P+V+ Y +L+ G CL + + A D+
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL 453
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 193/433 (44%), Gaps = 72/433 (16%)
Query: 22 PSIIEFGKILTSLVKMKHYPTA-------ISLSHQMESSGIISNMVTSS----------- 63
P++ + +L LV K +P A I L+ + E + +V+++
Sbjct: 111 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFD 170
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+L+ Y LG + F V ++L G+ +T L+ GL ++ Q + +
Sbjct: 171 MLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRV 230
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + +++ILT F + + + F + + +GF D V+Y+ L++ C+ G+
Sbjct: 231 GIHPNTYTFNILTNVFC----NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K A L + + + V PD+V YT++I LCKD V +A + MV + I P+ +Y
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---- 299
LIY +C G ++++ +LL EM+ ++ PD +T ++V+G +EG++ A N + +
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 300 ----------MIYGFCIVGQLKEATELLDEMV---------------------------- 321
+I C G+ A LLD ++
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 322 --------TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+N DA T+ L+ LC+ G+ + A++++ M VKP+ +L+ G
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 374 HCLVSEVNKAKDI 386
+C + +KA+ +
Sbjct: 527 YCKELDFDKAERL 539
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 172/391 (43%), Gaps = 58/391 (14%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+++ + R P+ F + ++ +ME G ++VT + L++ YC
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G++ AF + + ++ PD +T+T+LIKGLC + +V+ A Q +V +G + D +
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 131 SYSILTLKFSRRVI---SPTPVQRAL-------QFHDDVVAQGF-----RLDQVSYSI-- 173
SY+ L + + + S + L +F V+ +GF L V++ +
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 174 --------------LINGLCKMGQTKPALQLLRKI---EGKLVQPDVVMYTTIIDSLCKD 216
LI LC+ G+ A LL +I EG +P+ Y +I+SL +
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRC 460
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
+ +A L ++ ++ + + TY ALI C +G+ +EA L+ EM + PD++
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520
Query: 277 NILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
LV G CKE A+ +L + M + DP++Y + LV
Sbjct: 521 GALVYGYCKELDFDKAERLLSLFA-------------------MEFRIFDPESY--NSLV 559
Query: 337 DGLCKEG-KVKGAKNVLGVMMKQGVKPNVVT 366
+C+ G K A + M + G PN +T
Sbjct: 560 KAVCETGCGYKKALELQERMQRLGFVPNRLT 590
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +L+SL + L +M + ++ T + L+N YC LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ G PD T+T+ I G C +V A + ++ G ++VSY+ L
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ ++ DD R +Y++LI+ LC GQ A+ L +++ ++PD MY
Sbjct: 243 EALSLLVKMKDDNCCPNVR----TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T +I S C + +A L M+ ++PNV TY ALI GFC + +A LL +M+
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLE 357
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+N+ PD T+N L+ G C G + A +L +M
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR 142
++L+ PD TF TL+ G C V A Q+ ++ G D +Y+ RR
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRR 203
Query: 143 VISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPD 202
V A + ++ G ++VSY+ LI GL + + AL LL K++ P+
Sbjct: 204 ----KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
V YT +ID+LC ++A NL+ +M I P+ YT LI FC L EA+ LL+
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVT 322
M+ + P+ T+N L+ G CK KNV +A LL +M+
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK-------KNV---------------HKAMGLLSKMLE 357
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+N+ PD T++ L+ G C G + A +L +M + G+ PN T
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D +++ L+NG CK+G A Q + + PD YT+ I C+ K V AF ++
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
EM N +YT LIYG ++ EA LL +M N P+ T+ +L+D LC
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 287 GKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
G+ A N+ M +I FC L EA+ LL+ M+ + P+ T+
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ L+ G CK+ V A +L M++Q + P+++TYN+L+ G C ++ A
Sbjct: 334 NALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 31/297 (10%)
Query: 106 LNAQVQRALQFHDDVVA-QGFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQG 163
LN Q AL F D + F+ + SY S++TL S+ + P L
Sbjct: 36 LNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKS------ 89
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ V ++ + C+ + + ++ K+ K Y ++ SL + LV +
Sbjct: 90 --CNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKC-------YNNLLSSLARFGLVEEMK 140
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
LY+EM+ + P+++T+ L+ G+C +G + EA + + ++ DPD +T+ + G
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 284 CKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
C+ +V A V M +IYG ++ EA LL +M N P+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
T+++L+D LC G+ A N+ M + G+KP+ Y L+ C +++A +
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
L++ P + +T + K A + +M +G N V+ + LI +
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
I A S+L K+ P+ T+T LI LC + Q A+ + G + D Y++
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
L F S + A + ++ G + ++Y+ LI G CK K A+ LL K+
Sbjct: 301 LIQSF----CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKM 355
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
+ + PD++ Y T+I C + A+ L S M ++PN
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 182/389 (46%), Gaps = 21/389 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +FN L + + + ++++ Y A+++ +ME G ++T ++++N
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 68 CYCHLGQIPFA--FSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
+ +G P+ S++ K+ G PD T+ TLI + Q A Q +++ A GF
Sbjct: 252 VFGKMG-TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 126 RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
D+V+Y+ L + + S P + A++ +++V GF V+Y+ LI+ + G
Sbjct: 311 SYDKVTYNALLDVYGK---SHRP-KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
A++L ++ K +PDV YTT++ + V A +++ EM + PN+ T+ A I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL------------VDGLCKEGKVKG-- 291
+ G+ E ++ DE+ + PD T+N L V G+ KE K G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+ +I + G ++A + M+ + PD T++ ++ L + G + ++ V
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
L M KPN +TY SL+ + E+
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 162/357 (45%), Gaps = 19/357 (5%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
I++ L K +A ++ + ++ G ++ + + LI+ + + G+ A +V K+ + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 90 YQPDTITFTTLIKGLC-LNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
+P IT+ ++ + + + + + G D +Y+ L R +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH--- 295
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
Q A Q +++ A GF D+V+Y+ L++ K + K A+++L ++ P +V Y +
Sbjct: 296 -QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I + +D ++ +A L ++M K P+VFTYT L+ GF G+++ A + +EM
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEAT 314
P+ TFN + GK + + + G F G E +
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ EM P+ TF+ L+ + G + A V M+ GV P++ TYN+++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 176/425 (41%), Gaps = 53/425 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + N ++ +PSI+ + ++++ + A+ L +QM G ++ T + L++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G++ A S+ ++ G +P+ TF IK + ++ D++ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+++ L F + + + V + ++ GF ++ +++ LI+ + G + A
Sbjct: 453 DIVTWNTLLAVFGQNGMD-SEVSGVFK---EMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ + R++ V PD+ Y T++ +L + + + + +EM R PN TY +L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 248 FCIVGQ-----------------------------------LKEATELLDEMVTKNIDPD 272
+ + L EA E+ + PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLKEATELLD 318
T N +V + V A VL M GF ++ E+L
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
E++ K I PD +++ ++ C+ +++ A + M G+ P+V+TYN+ + + S
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 379 EVNKA 383
+A
Sbjct: 749 MFEEA 753
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/426 (19%), Positives = 183/426 (42%), Gaps = 53/426 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + N++ P + + +L+ + +A+S+ +M ++G N+ T + I
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + G+ + +I G PD +T+ TL+ N ++ GF
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++ +++ L +SR ++A+ + ++ G D +Y+ ++ L + G + +
Sbjct: 488 ERETFNTLISAYSR----CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDK------------------------------ 217
++L ++E +P+ + Y +++ + K
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 218 -----LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
L+ +A +SE+ + P++ T +++ + + +A +LD M + P
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 273 AYTFNILV------------DGLCKEGKVKGAK-NVLGV-MMIYGFCIVGQLKEATELLD 318
T+N L+ + + +E KG K +++ +IY +C ++++A+ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
EM I PD T++ + + + A V+ M+K G +PN TYNS++DG+C ++
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 379 EVNKAK 384
++AK
Sbjct: 784 RKDEAK 789
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 30/297 (10%)
Query: 78 AFSVLAKILKKGYQP--DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL 135
AF K +K YQ D +I L +V A + + GF LD SY+ L
Sbjct: 157 AFDWFMK--QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 136 TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL-QLLRKI 194
F+ + + A+ + G + ++Y++++N KMG + L+ K+
Sbjct: 215 ISAFA----NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
+ + PD Y T+I + L +A ++ EM + + TY AL+ + +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEAT 314
KEA ++L+EMV P T+N L+ ++ G L EA
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARD---------------------GMLDEAM 369
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
EL ++M K PD +T++ L+ G + GKV+ A ++ M G KPN+ T+N+ +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 25/316 (7%)
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
GQ+ S L + K + + +KGL + + AL+ D + Q +
Sbjct: 114 GQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDN 173
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
S++ + S + V A + + GF LD SY+ LI+ G+ + A+ + +
Sbjct: 174 SVVAIIISM-LGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF-NLYSEMVSKRILPNVFTYTALIYGFCIV 251
K+E +P ++ Y I++ K + +L +M S I P+ +TY LI C
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKR 291
Query: 252 GQL-KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
G L +EA ++ +EM D T+N L+D +YG +
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLD-------------------VYGKS--HRP 330
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
KEA ++L+EMV P T++ L+ ++G + A + M ++G KP+V TY +L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 371 MDGHCLVSEVNKAKDI 386
+ G +V A I
Sbjct: 391 LSGFERAGKVESAMSI 406
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 127/301 (42%), Gaps = 41/301 (13%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ ++ R+L TP + + +L +L + + + + +ME N +T L++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 68 CYCHLGQI-----------------------------------PFAFSVLAKILKKGYQP 92
Y + +I P A +++ ++G+ P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA 152
D T +++ V +A D + +GF +Y+ L SR ++
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA----DFGKS 683
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
+ +++A+G + D +SY+ +I C+ + + A ++ ++ + PDV+ Y T I S
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
D + +A + M+ PN TY +++ G+C + + EA ++++ +N+DP
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNLDPH 801
Query: 273 A 273
A
Sbjct: 802 A 802
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 183/368 (49%), Gaps = 25/368 (6%)
Query: 19 HPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP-- 76
H S+ + ++ S K++ Y L + M ++ N+ T I++ Y ++
Sbjct: 129 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEA 187
Query: 77 -FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL 135
+AF+V+ K P+ + F L+ LC + V++A + +++ + F D +YSIL
Sbjct: 188 IYAFNVMEKY---DLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 136 TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE 195
+ + P +A + +++ G D V+YSI+++ LCK G+ AL ++R ++
Sbjct: 244 LEGWGKEPNLP----KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLK 255
+ +P +Y+ ++ + + + +A + + EM + +V + +LI FC ++K
Sbjct: 300 PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 256 EATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG-------------VMMIY 302
+L EM +K + P++ + NI++ L + G+ A +V M+I
Sbjct: 360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIK 419
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
FC +++ A ++ M K + P +TFS+L++GLC+E + A +L M++ G++P
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 363 NVVTYNSL 370
+ VT+ L
Sbjct: 480 SGVTFGRL 487
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 27/337 (8%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A++ FN + + P+++ F +L++L K K+ A + M + T SIL+
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLE 245
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ +P A V +++ G PD +T++ ++ LC +V AL + +
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
YS+L + + ++ A+ ++ G + D ++ LI CK + K
Sbjct: 306 TTFIYSVLVHTYG----TENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L++++ K V P+ I+ L + +AF+++ +M+ K P+ TYT +I
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKM 420
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC +++ A ++ M K + P +TF++L++GLC+E + A C+
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKA------------CV- 467
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
LL+EM+ I P TF L L KE +
Sbjct: 468 --------LLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 15/235 (6%)
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNL 225
L+ ++ I++ + + A+ +E + P++V + ++ +LCK K V A +
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
+ M R P+ TY+ L+ G+ L +A E+ EM+ PD T++I+VD LCK
Sbjct: 226 FENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 286 EGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
G+V A ++ M +++ + +L+EA + EM + D
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
F+ L+ CK ++K VL M +GV PN + N ++ E ++A D+
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+Y ++I K+ Q K L+ + K + +V + ++ + + V +A ++ M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ PN+ + L+ C +++A E+ + M + PD+ T++IL++G KE
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP-- 251
Query: 290 KGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
L +A E+ EM+ PD T+SI+VD LCK G+V A
Sbjct: 252 -------------------NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
++ M KP Y+ L+ + + + +A D
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
+ V Y +I+S K + ++L + M K++L NV T+ ++ + ++ EA
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIY 189
Query: 260 LLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDE 319
+ M ++ P+ FN L+ LCK V+ A+ V E
Sbjct: 190 AFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF----------------------E 227
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
+ PD+ T+SIL++G KE + A+ V M+ G P++VTY+ ++D C
Sbjct: 228 NMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR 287
Query: 380 VNKA 383
V++A
Sbjct: 288 VDEA 291
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 53/412 (12%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I + +++S K+ +AI L +M+ + + + L+ Y +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV----------- 130
++ + G P T+T LIKGL +V A F+ D++ G D V
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 131 --SYSILTLKFSR--------RVISPTPVQRAL-----------QFHDDVVAQGFRLDQV 169
LT FS V+S V +AL + D + A +
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+YSILI+G CK + + AL LL +++ K P Y ++I++L K K A L+ E+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 230 VSKRILPNVFT--YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
K NV + Y +I F G+L EA +L +EM + PD Y +N L+ G+ K G
Sbjct: 471 --KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 288 KVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
+ A ++L M ++ GF G + A E+ + + I PD T++
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 334 ILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
L+ G + A ++ M +G + + +TY+S++D V V+ KD
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA---VGNVDHEKD 637
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 22/382 (5%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P+++ +++ +L + K A+S+ +Q + T + +I GQ
Sbjct: 161 SPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 81 VLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
V ++ +G PDTIT++ LI + A++ D++ + + Y+ L +
Sbjct: 219 VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
V++AL +++ G +Y+ LI GL K G+ A + + +
Sbjct: 279 ----FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG-FCIVGQLKEAT 258
PDVV +++ L K V + N++SEM R P V +Y +I F + E +
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF-------C----IV 307
D+M ++ P +T++IL+DG CK +V+ A +L M GF C +
Sbjct: 395 SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 308 GQLKE---ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
G+ K A EL E+ + + +++++ K GK+ A ++ M QG P+V
Sbjct: 455 GKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
YN+LM G +N+A +
Sbjct: 515 YAYNALMSGMVKAGMINEANSL 536
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 128/274 (46%), Gaps = 5/274 (1%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMK-HYPTAISLSHQMESSGIISNMVTSSILINCY 69
+F+ + TP+++ + ++ +L + K H S +M++ + + T SILI+ Y
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C ++ A +L ++ +KG+ P + +LI L + + A + ++ +
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
Y+++ F + + A+ +++ QG D +Y+ L++G+ K G A
Sbjct: 480 RVYAVMIKHFGK----CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
LLRK+E + D+ + I++ + + A ++ + I P+ TY L+ F
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
G +EA ++ EM K + DA T++ ++D +
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 144/342 (42%), Gaps = 62/342 (18%)
Query: 87 KKGYQPDTITFTTLIKGL---CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++ +Q D T+ TLI+ L L ++ R +Q +VV + VS ++L+ + + +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQ---EVVRNTYV--SVSPAVLS-ELVKAL 172
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI--EGKLVQP 201
V +AL + + +Y+ +I L + GQ + ++ ++ EG P
Sbjct: 173 GRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-P 231
Query: 202 DVVMYTTIIDSLCK-----------DKL------------------------VTDAFNLY 226
D + Y+ +I S K D++ V A +L+
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
EM P V+TYT LI G G++ EA +M+ + PD N L++ L K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 287 GKVKGAKNVLGVMMIYG---------------FCIVGQLKEATELLDEMVTKNIDPDAYT 331
G+V+ NV M ++ F + E + D+M ++ P +T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+SIL+DG CK +V+ A +L M ++G P Y SL++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 61/349 (17%)
Query: 35 VKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDT 94
++ +PT SL H+M S I + T +I+ Y G+ A + + + G D
Sbjct: 102 ARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL 161
Query: 95 ITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ 154
+F T++ LC + +V++A + RAL+
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELF---------------------------------RALR 188
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
F +D V+Y++++NG C + +T AL++L+++ + + P++ Y T++
Sbjct: 189 -------GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+ + A+ + EM + +V TYT +++GF + G++K A + DEM+ + + P
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 275 TFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
T+N ++ LCK+ V+ A V+M +EMV + +P+ T+++
Sbjct: 302 TYNAMIQVLCKKDNVENA-----VVM----------------FEEMVRRGYEPNVTTYNV 340
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
L+ GL G+ + ++ M +G +PN TYN ++ + SEV KA
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+++I+ G+ A++L + D+ + TI+D LCK K V A+ L+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
R + TY ++ G+C++ + +A E+L EMV + I+P+ T+N ++ G + G++
Sbjct: 188 RG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 290 KGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+ A M +++GF + G++K A + DEM+ + + P T++ +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ LCK+ V+ A + M+++G +PNV TYN L+ G E ++ +++
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 24 IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
+ F IL L K K A L + + + VT ++++N +C + + P A VL
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
+++++G P+ T+ T++KG Q++ A +F ++ + +D V+Y+ + F
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG--- 276
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
++RA D+++ +G +Y+ +I LCK + A+ + ++ + +P+V
Sbjct: 277 -VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 335
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
Y +I L + L M ++ PN TY +I + ++++A L ++
Sbjct: 336 TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Query: 264 MVTKNIDPDAYTFNILVDGL 283
M + + P+ T+NIL+ G+
Sbjct: 396 MGSGDCLPNLDTYNILISGM 415
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
R LR + + + IL +K P A+ + +M GI N+ T + ++ + G
Sbjct: 185 RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
QI A+ ++ K+ + D +T+TT++ G + +++RA D+++ +G +Y+
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ ++ V+ A+ +++V +G+ + +Y++LI GL G+ +L+++
Sbjct: 305 AMIQVLCKK----DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+E + +P+ Y +I + V A L+ +M S LPN+ TY LI G
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 4/233 (1%)
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
H G + AF + G P+T ++ L++ CLN + A Q ++ + D
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
SY IL F R+ V A++ DD++ +GF D++SY+ L+N LC+ Q + A +L
Sbjct: 227 SYKILIQGFCRK----GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
L +++ K PD+V Y T+I C++ DA + +M+S PN +Y LI G C
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
G E + L+EM++K P N LV G C GKV+ A +V+ V+M G
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G + A +L + V P+ Y ++ + C + ++ A+ L+ +M+ + ++P+V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
LI GFC GQ+ A ELLD+M+ K PD ++ L++ LC++ +++ A +L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 300 ------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
MI GFC + +A ++LD+M++ P++ ++ L+ GLC +G
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K L M+ +G P+ N L+ G C +V +A D+
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ----GFRLDQVSYSILINGLCK 180
FR + S+ IL LK R R DDV+A+ G+ L ++ LI +
Sbjct: 80 FRHSRSSHLILILKLGR--------GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAE 131
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK-LVTDAFNLYSEMVSKRILPNVF 239
+ L K+ P I+D L + + AF L+ ++PN
Sbjct: 132 AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTR 191
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+Y L+ FC+ L A +L +M+ +++ PD ++ IL+ G C++G+V G
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG-------- 243
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
A ELLD+M+ K PD +++ L++ LC++ +++ A +L M +G
Sbjct: 244 -------------AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 360 VKPNVVTYNSLMDGHCLVSEVNKAKDI 386
P++V YN+++ G C A+ +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKV 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 41/252 (16%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A L +M ++ ++ + ILI +C GQ+ A +L +L KG+ PD +++TTL+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
LC Q++ A + + +G D V Y+ + L F R A + DD+++
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE----DRAMDARKVLDDMLSN 324
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G + VSY LI GLC G EGK
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFD---------EGK------------------------- 350
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFNILVD 281
EM+SK P+ L+ GFC G+++EA +++ E+V KN + + T+ +++
Sbjct: 351 -KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV-EVVMKNGETLHSDTWEMVIP 408
Query: 282 GLCKEGKVKGAK 293
+C E + + K
Sbjct: 409 LICNEDESEKIK 420
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 96/214 (44%), Gaps = 8/214 (3%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L +A +F ++L P + + ++ + A+ L M + G + + ++ +
Sbjct: 206 LSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTT 265
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+N C Q+ A+ +L ++ KG PD + + T+I G C + A + DD+++ G
Sbjct: 266 LLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG 325
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ VSY L + + ++ ++++++GF + L+ G C G+
Sbjct: 326 CSPNSVSYRTLIGGLCDQGM----FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 185 KPALQLLRKI--EGKLVQPDVVMYTTIIDSLCKD 216
+ A ++ + G+ + D + +I +C +
Sbjct: 382 EEACDVVEVVMKNGETLHSDT--WEMVIPLICNE 413
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 25/365 (6%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+AV + + +++ P + + I+ + K ++ L +M+ +G+ + T + +
Sbjct: 457 MAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C A +L K+ G++P T L+K LC N + A ++ DDV +GF
Sbjct: 517 GCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF- 575
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ + + + +I V R L+ D+ A G D ++Y +LI LCK +T
Sbjct: 576 ---LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A L ++ K ++P V Y ++ID CK+ + + M P+V TYT+LI+
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G C G+ EA +EM K+ P+ TF L+ GLCK
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK--------------------- 731
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G EA EM K ++PD+ + LV + + M+ +G P V
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 367 YNSLM 371
N ++
Sbjct: 792 RNYML 796
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 145/326 (44%), Gaps = 29/326 (8%)
Query: 52 SSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQ 111
+ I+ + + SI+INC ++ A ++L I++ G P + + +I+G+C + +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 112 RALQFHDDVVAQGFRLDQVSYSILTLKFSRRV--ISPTPVQRALQFHDDVVAQGFRLDQV 169
+L+ ++ G Q + + + + R + + + ++F+ GF
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY------GFEPWIK 545
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+ L+ LC+ G+ A + L + G+ +V T ID L K++ V L+ ++
Sbjct: 546 HTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDI 605
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ P+V Y LI C + EA L +EMV+K + P T+N ++DG CKEG++
Sbjct: 606 CANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Query: 290 KGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
+ CIV M +PD T++ L+ GLC G+ A
Sbjct: 666 DRGLS----------CIV-----------RMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHC 375
M + PN +T+ +L+ G C
Sbjct: 705 FRWNEMKGKDCYPNRITFMALIQGLC 730
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 165/416 (39%), Gaps = 63/416 (15%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ S K A L +E I N T +LI+ + +I AF + K+ + G
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR------- 142
D + LI GLC + ++ AL + ++ G D+ L FS
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 143 --VISPTPVQRALQFHDDVVAQGFRLDQV--SYSILIN--GLCKMGQTKPALQLLRKIEG 196
+I + + + + R D V +YS + N G + ++LL K
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL-KDHN 432
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
K + PD + +I+ L K V A L ++V ++P Y +I G C G+ +E
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF------------ 304
+ +LL EM ++P +T N + L + GA ++L M YGF
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 305 --CIVGQLKEATELLDEMV-----------TKNID------------------------P 327
C G+ +A + LD++ T ID P
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
D + +L+ LCK + A + M+ +G+KP V TYNS++DG C E+++
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 32/405 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F ++ R I + ++ L K K A+SL +++ SGI + L+
Sbjct: 302 AFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC 361
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ ++ V+ + K + + + +L +G N V A F +++ +
Sbjct: 362 SFSEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGN-YES 418
Query: 128 DQVSYSILTLKFSRRVISP---------------TPVQRALQFHDDVVAQGFRLDQVSYS 172
D VS + LK + I P V A+ D+V G + Y+
Sbjct: 419 DGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYN 478
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+I G+CK G+++ +L+LL +++ V+P I L + A +L +M
Sbjct: 479 NIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK-EGKVKG 291
P + T L+ C G+ +A + LD++ + +DGL K EG +G
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 292 AK------------NVLGV-MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+ +V+ ++I C + EA L +EMV+K + P T++ ++DG
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
CKEG++ + + M + P+V+TY SL+ G C ++A
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 151/344 (43%), Gaps = 38/344 (11%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGY-QPDTITFTTLIKGLCLN--AQVQRALQFHDDVV 121
I C + G + A SV ++ + G P+ T+ L++ + + + V+ ++
Sbjct: 147 FIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMR 206
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
GF D+ + + + + S +RAL ++++++G+ LD+ +IL+ CK
Sbjct: 207 DCGFHFDKFTLTPVLQVYCNTGKS----ERALSVFNEILSRGW-LDEHISTILVVSFCKW 261
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
GQ A +L+ +E + ++ + Y +I K+ + AF L+ +M + ++ Y
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL----- 296
LI G C L+ A L E+ I PD L+ +E ++ V+
Sbjct: 322 DVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDID 381
Query: 297 --GVMMIY-----GFCIVGQLKEATELLDEMV------------------TKNIDPDAYT 331
VM++Y GF + EA + ++ K I PD+ +
Sbjct: 382 KKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDS 441
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
SI+++ L K KV A +L +++ G+ P + YN++++G C
Sbjct: 442 LSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC 485
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 20/232 (8%)
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
+G+R D +Y+ + + L + Q L+ + + I L LV +
Sbjct: 100 EGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDE 159
Query: 222 AFNLYSEMVSKRI-LPNVFTYTALIYGFCIVGQLKEATEL----LDEMVTKNIDPDAYTF 276
A +++ + + +PN +TY L+ I + EL L EM D +T
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEA--ISKSNSSSVELVEARLKEMRDCGFHFDKFTL 217
Query: 277 NILVDGLCKEGKVKGAKNV-------------LGVMMIYGFCIVGQLKEATELLDEMVTK 323
++ C GK + A +V + +++ FC GQ+ +A EL++ + +
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEER 277
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+I + T+ +L+ G KE ++ A + M + G+ ++ Y+ L+ G C
Sbjct: 278 DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 123/287 (42%), Gaps = 34/287 (11%)
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+G+R D +Y+ + SR +AL DV+ + ++ I L G
Sbjct: 100 EGYRNDMYAYNAMASILSR--ARQNASLKALVV--DVLNSRCFMSPGAFGFFIRCLGNAG 155
Query: 183 QTKPALQLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP----- 236
A + ++ E L P+ Y +++++ K + E+V R+
Sbjct: 156 LVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSS------VELVEARLKEMRDCG 209
Query: 237 ---NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
+ FT T ++ +C G+ + A + +E++++ D + ILV CK G+V A
Sbjct: 210 FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAF 268
Query: 294 NVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
++ ++ +I+GF ++ +A +L ++M ++ D + +L+ GL
Sbjct: 269 ELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
CK ++ A ++ + + G+ P+ L+ SE+++ ++
Sbjct: 329 CKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEV 375
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 51/400 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILI 66
+V +F + + +PS++ F +L+ L+K A L +M + G+ + T + LI
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC-----------LNAQVQRALQ 115
N +C + AF + + PD +T+ T+I GLC L+ +++A
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
H +VV SY+ L R + A+ D++++G + + V+Y+ LI
Sbjct: 277 VHPNVV---------SYTTLV----RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 176 NGLCKMGQTKPALQLLRKIEGK----LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
GL + + +L I G PD + +I + C + A ++ EM++
Sbjct: 324 KGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI-------DPDAYTFNILVDGLC 284
++ P+ +Y+ LI C+ + A L +E+ K + P A +N + + LC
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLC 441
Query: 285 KEGKVKGAKNVLGVMM-------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
GK K A+ V +M I G C G+ K A ELL M+ + PD T
Sbjct: 442 ANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLET 501
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ +L+DGL K G+ A + L M++ P T++S++
Sbjct: 502 YELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 59/324 (18%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI Y + G + + + + G P +TF +L+ L + A D++
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM---- 199
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
RR TP D +++ LING CK
Sbjct: 200 ----------------RRTYGVTP------------------DSYTFNTLINGFCKNSMV 225
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR--ILPNVFTYT 242
A ++ + +E PDVV Y TIID LC+ V A N+ S M+ K + PNV +YT
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYT 285
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
L+ G+C+ ++ EA + +M+++ + P+A T+N L+ GL + + K++L
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL------ 339
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
I G D T PDA TF+IL+ C G + A V M+ + P
Sbjct: 340 ---IGGN--------DAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 363 NVVTYNSLMDGHCLVSEVNKAKDI 386
+ +Y+ L+ C+ +E ++A+ +
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETL 410
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 23/295 (7%)
Query: 94 TITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRAL 153
TI+ TT+++ L L L+F D V +GF + S+ L L+F R + V R
Sbjct: 65 TISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSF-FLMLEFLGRARNLN-VARNF 122
Query: 154 QFHDDVVAQG-FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
F + + G +L ++ LI G + +++L + ++ + P V+ + +++
Sbjct: 123 LFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSI 182
Query: 213 LCKDKLVTDAFNLYSEMVSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
L K A +L+ EM + P+ +T+ LI GFC + EA + +M + +P
Sbjct: 183 LLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNP 242
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
D T+N ++DGLC+ GKVK A NVL G LK+AT+ + P+ +
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLS----------GMLKKATD---------VHPNVVS 283
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ LV G C + ++ A V M+ +G+KPN VTYN+L+ G ++ KDI
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 184/460 (40%), Gaps = 102/460 (22%)
Query: 11 IFNRLLRTHP-TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
+F+ + RT+ TP F ++ K A + ME ++VT + +I+
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 70 CHLGQIPFAFSVLAKILKKG--YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
C G++ A +VL+ +LKK P+ +++TTL++G C+ ++ A+ D++++G +
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQG-----FRLDQVSYSILINGLCKMG 182
+ V+Y+ L S R + D ++ F D +++ILI C G
Sbjct: 315 NAVTYNTLIKGLSE-------AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL------- 235
A+++ +++ + PD Y+ +I +LC A L++E+ K +L
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 236 ----------------------PNVF------------TYTALIYGFCIVGQLKEATELL 261
VF +Y LI G C G+ K A ELL
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELL 487
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG-----------QL 310
M+ + PD T+ +L+DGL K G+ A + L M+ + V +
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Query: 311 KEATE-------LLDEMVTKNIDPDAYTFSILVDG------------------------- 338
K A E +L++ + +NID +L
Sbjct: 548 KFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEEL 607
Query: 339 ---LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
LC+ K+ A ++ +++ ++ T N++++G C
Sbjct: 608 LGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLC 647
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 154/381 (40%), Gaps = 68/381 (17%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQM--ESSGIISNMVTSSIL 65
A IF + H P ++ + I+ L + A ++ M +++ + N+V+ + L
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGL--------------------- 104
+ YC +I A V +L +G +P+ +T+ TLIKGL
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFT 347
Query: 105 ----------------CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
C + A++ +++ D SYS+L R +
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI----RTLCMRNE 403
Query: 149 VQRALQFHDDVVAQGFRLDQ-------VSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
RA +++ + L + +Y+ + LC G+TK A ++ R++ + VQ
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ- 462
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D Y T+I C++ A+ L M+ + +P++ TY LI G +G+ A + L
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
M+ + P A TF+ ++ L K K A FC+V T +L++ +
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKR---KFANE--------SFCLV------TLMLEKRI 565
Query: 322 TKNIDPDAYTFSILVDGLCKE 342
+NID +L KE
Sbjct: 566 RQNIDLSTQVVRLLFSSAQKE 586
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 139/357 (38%), Gaps = 73/357 (20%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPT--AISLSHQMESSGIISNMVTSSIL 65
AV +F+ +L P+ + + ++ L + Y I + + + T +IL
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
I +C G + A V ++L PD+ +++ LI+ LC+ + RA +++ +
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Query: 126 RLDQVSYSILTLKFS---RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
L + L ++ + + ++A + ++ +G + D SY LI G C+ G
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREG 478
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIID------------------------------- 211
+ KPA +LL + + PD+ Y +ID
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 538
Query: 212 ----SLCKDKLVTDAFNLYSEMVSKRILPNV-------------------FTYTALIY-- 246
L K K ++F L + M+ KRI N+ F L+Y
Sbjct: 539 SVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDN 598
Query: 247 GFCI-----VGQLKEATELLDEM------VTKNIDPDAYTFNILVDGLCKEGKVKGA 292
G+ + +G L E +LLD + K+ D T N +++GLCK + A
Sbjct: 599 GYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEA 655
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F L ++ P + +L VK A S+ +ME G+ + T S+LI+
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + G+ A VL ++ QP++ F+ L+ G + Q+ Q ++ + G +
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D+ Y+++ F + + A+ D ++++G D+V+++ LI+ CK G+ A
Sbjct: 443 DRQFYNVVIDTFGKF----NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ +E + P Y +I+S + D L +M S+ ILPNV T+T L+
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
+ G+ +A E L+EM + + P + +N L++ + G + A N VM
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM-------- 610
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+ + P + L++ ++ + A VL M + GVKP+VVTY
Sbjct: 611 -------------TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 368 NSLMDGHCLVSEVNK 382
+LM V + K
Sbjct: 658 TTLMKALIRVDKFQK 672
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 20/297 (6%)
Query: 95 ITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL--TLKFSRRVISPTPVQRA 152
+T+ LI N +++AL + G++ D V+YS++ +L S ++ S
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM----L 253
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
L+ + ++ LD + +I G K G ALQLL + + +II +
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
L +A L+ E+ I P Y AL+ G+ G LK+A ++ EM + + PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLD 318
+T+++L+D G+ + A+ VL M ++ GF G+ ++ ++L
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
EM + + PD +++++D K + A M+ +G++P+ VT+N+L+D HC
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 22/360 (6%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
I+ K A+ L +++G+ + T +I+ G+ A ++ ++ + G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF--SRRVISPT 147
+P T + L+KG ++ A ++ +G D+ +YS+L + + R S
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 148 PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
V + ++ DV F +S L+ G G+ + Q+L++++ V+PD Y
Sbjct: 395 IVLKEME-AGDVQPNSF-----VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
+ID+ K + A + M+S+ I P+ T+ LI C G+ A E+ + M +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEA 313
P A T+NI+++ + + K +LG M G + G+ +A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
E L+EM + + P + ++ L++ + G + A N VM G+KP+++ NSL++
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 149/331 (45%), Gaps = 20/331 (6%)
Query: 60 VTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA--LQFH 117
+T + LI I A +++AK+ + GYQ D + ++ +I+ L + ++ L+ +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
++ LD + + + F++ S P +ALQ A G + +I+
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAK---SGDP-SKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
L G+T A L ++ ++P Y ++ K + DA ++ SEM + + P+
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
TY+ LI + G+ + A +L EM ++ P+++ F+ L+ G G+ + VL
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 298 VMMIYG--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
M G F L A D M+++ I+PD T++ L+D CK G
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+ A+ + M ++G P TYN +++ +
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 18/325 (5%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+I + G A +L G T T ++I L + + A +++ G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ +Y+ L + + P++ A ++ +G D+ +YS+LI+ G+
Sbjct: 335 IKPRTRAYNALLKGY----VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ A +L+++E VQP+ +++ ++ F + EM S + P+ Y +
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----- 299
I F L A D M+++ I+PD T+N L+D CK G+ A+ + M
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 300 ---------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
MI + + + LL +M ++ I P+ T + LVD K G+ A
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHC 375
L M G+KP+ YN+L++ +
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYA 595
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A++ +M S GI + VT + LI+C+C G+ A + + ++G P T+ +I
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
+ + + +QG + V+++ L + + A++ +++ +
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK----SGRFNDAIECLEEMKSV 578
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G + Y+ LIN + G ++ A+ R + ++P ++ ++I++ +D+ +A
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
F + M + P+V TYT L+ V + ++ + +EM+ PD ++L
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Query: 283 L 283
L
Sbjct: 699 L 699
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 165/324 (50%), Gaps = 27/324 (8%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQ-PDTITFTTLIKGLCLNAQVQR 112
G+ N +IL+ +C G I FAF V+ ++ + G P++IT++TL+ L +++ +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 113 ALQFHDDVVA-QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSY 171
A++ +D+++ +G D V+++++ F R V+RA + D + G + +Y
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCR----AGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
S L+NG CK+G+ + A Q +++ ++ D V YTT+++ C++ +A L EM +
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
R + TY ++ G G+ +EA ++LD+ ++ + + ++ I+++ L
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL-------- 418
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
C G+L++A + L M + I P T++ LV LC+ G + V
Sbjct: 419 -------------CCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHC 375
L ++ G+ P ++ ++++ C
Sbjct: 466 LIGFLRIGLIPGPKSWGAVVESIC 489
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 16/237 (6%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ-PDVVMYTTIIDSLCKDKLVTD 221
G + + ++IL+ CK G A ++ +++ + P+ + Y+T++D L +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 222 AFNLYSEMVSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
A L+ +M+SK I P+ T+ +I GFC G+++ A ++LD M +P+ Y ++ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 281 DGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNID 326
+G CK GK++ AK + G FC G+ EA +LL EM
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
D T+++++ GL EG+ + A +L +GV N +Y +++ C E+ KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 38/313 (12%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+KG+ + T++ L+ L + + + + R + + L FSR
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRS---- 137
Query: 147 TPVQRALQFHDDVVAQGFRLDQV---------SYSILINGLCKMGQTKPALQLLRKIEGK 197
HD V+ + F L QV + S +N L G+ + +LL +
Sbjct: 138 -------DLHDKVM-EMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHN 189
Query: 198 L-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI-LPNVFTYTALIYGFCIVGQLK 255
L +QP+ ++ ++ CK+ + AF + EM I PN TY+ L+ + K
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 256 EATELLDEMVTKN-IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------M 300
EA EL ++M++K I PD TFN++++G C+ G+V+ AK +L M +
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+ GFC VG+++EA + DE+ + D ++ L++ C+ G+ A +LG M
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 361 KPNVVTYNSLMDG 373
+ + +TYN ++ G
Sbjct: 370 RADTLTYNVILRG 382
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P + F ++ + A + M+ +G N+ S L+N +C +G+I A
Sbjct: 265 SPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
++ K G + DT+ +TTL+ C N + A++ ++ A R D ++Y+++
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL---- 380
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R + S + ALQ D ++G L++ SY I++N LC G+ + A++ L + + +
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P + ++ LC+ + + ++P ++ A++ C +L EL
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFEL 500
Query: 261 LDEMVT 266
LD +V+
Sbjct: 501 LDSLVS 506
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 26/252 (10%)
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
F+ +GF + +YS+L++ L + + +L +++ + + ++ ++
Sbjct: 76 FNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFS 135
Query: 215 KDKL---VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN--- 268
+ L V + FNL V R+ P++ + + G++ + +LL + K+
Sbjct: 136 RSDLHDKVMEMFNLIQ--VIARVKPSLNAISTCLNLLIDSGEVNLSRKLL--LYAKHNLG 191
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF-------------CIVG--QLKEA 313
+ P+ FNILV CK G + A V+ M G C+ + KEA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 314 TELLDEMVTKN-IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
EL ++M++K I PD TF+++++G C+ G+V+ AK +L M K G PNV Y++LM+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 373 GHCLVSEVNKAK 384
G C V ++ +AK
Sbjct: 312 GFCKVGKIQEAK 323
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 27/358 (7%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
LT L +++ A+SL HQ + G + + S LI +L + +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQ-FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
+ F LI+ V +A+ FH R Q +++ + ++
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINV-----LVDNGE 166
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+++A F D R + VS++ILI G + A ++ ++ VQP VV Y +
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNS 226
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I LC++ + A +L +M+ KRI PN T+ L+ G C G+ EA +L+ +M +
Sbjct: 227 LIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
P + IL+ L K G++ AK +LG EM + I PD
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAKLLLG---------------------EMKKRRIKPD 325
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ILV+ LC E +V A VL M +G KPN TY ++DG C + + + ++
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 148/334 (44%), Gaps = 25/334 (7%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
AI + H++ S + + + + LIN G++ A S +P++++F LIK
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
G + A + D+++ + V+Y+ L R + +A +D++ +
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN----DDMGKAKSLLEDMIKK 250
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
R + V++ +L+ GLC G+ A +L+ +E + +P +V Y ++ L K + +A
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
L EM +RI P+V Y L+ C ++ EA +L EM K P+A T+ +++DG
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
C+ NVL M+ C P TF +V GL K
Sbjct: 371 FCRIEDFDSGLNVLNAMLASRHC---------------------PTPATFVCMVAGLIKG 409
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
G + A VL VM K+ + + +L+ C+
Sbjct: 410 GNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 4/292 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+++ +I ++ LV A S + + N V+ +ILI
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ A V ++L+ QP +T+ +LI LC N + +A +D++ + R
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ V++ +L + + A + D+ +G + V+Y IL++ L K G+ A
Sbjct: 255 NAVTFGLLM----KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
LL +++ + ++PDVV+Y +++ LC + V +A+ + +EM K PN TY +I G
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
FC + +L+ M+ P TF +V GL K G + A VL VM
Sbjct: 371 FCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+ + F ++ + + A + +M + ++VT + LI C + A S+
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++KK +P+ +TF L+KGLC + A + D+ +G + V+Y IL +
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
R + A ++ + + D V Y+IL+N LC + A ++L +++ K +P
Sbjct: 304 R----GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ Y +ID C+ + N+ + M++ R P T+ ++ G G L A +L
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 262 DEMVTKNIDPDAYTFNILVDGLC-KEGKV 289
+ M KN+ + + L+ LC K+G V
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 148/316 (46%), Gaps = 25/316 (7%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N+ + ++N Y G + A ++ K+ +PD TF LI G C +++ AL
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
++ +G + VS++ L F +S ++ ++ +++ G R + + IL++G
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGF----LSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
LC+ G+ A L+ + K V P Y ++++ LC + A + E+ K P
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
T L+ G G+ ++A+ +++M+ I PD+ TFN+L+ LC A N L
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLR 426
Query: 298 VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
++ +K +PD T+ +LV G KEG+ K + ++ M+
Sbjct: 427 LLA--------------------SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLD 466
Query: 358 QGVKPNVVTYNSLMDG 373
+ + P++ TYN LMDG
Sbjct: 467 KDMLPDIFTYNRLMDG 482
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
Y+ ++NG K G AL+ +++ + +PDV + +I+ C+ A +L+ EM
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
K PNV ++ LI GF G+++E ++ EM+ T ILVDGLC+EG+V
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 291 GA---------KNVLGVMMIYG-----FCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
A K VL YG C + A E+++E+ K P + LV
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+GL K G+ + A + MM G+ P+ VT+N L+ C
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 25/323 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ + ++ VK A+ +M ++ T +ILIN YC + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ +KG +P+ ++F TLI+G + +++ ++ +++ G R + + IL R
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
V A D++ + + Y L+ LC + A++++ ++ K P
Sbjct: 311 E----GRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ TT+++ L K A +M++ ILP+ T+ L+ C +A L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
+K +PD T+++LV G KEG+ KE L++EM+
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTKEGR---------------------RKEGEVLVNEML 465
Query: 322 TKNIDPDAYTFSILVDGLCKEGK 344
K++ PD +T++ L+DGL GK
Sbjct: 466 DKDMLPDIFTYNRLMDGLSCTGK 488
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 14/286 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + R+ + P + F ++ + + A+ L +M+ G N+V+ + LI
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G+I + ++++ G + T L+ GLC +V DD A G L
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV-------DD--ACGLVL 322
Query: 128 DQVSYSILTLKFS-----RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
D ++ +L +F ++ RA++ +++ +G ++ + L+ GL K G
Sbjct: 323 DLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSG 382
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+T+ A + K+ + PD V + ++ LC TDA L SK P+ TY
Sbjct: 383 RTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYH 442
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
L+ GF G+ KE L++EM+ K++ PD +T+N L+DGL GK
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 30/217 (13%)
Query: 175 INGLCKMGQTKPAL----QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
I+ C+ + AL + R I+GK P+V +Y T+++ K + A Y M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKALRFYQRMG 220
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
+R P+V T+ LI G+C + A +L EM K +P+ +FN L+ G GK++
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIE 280
Query: 291 GAKNVLGVMMIYGFCIVG-QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
GV M Y +G + EAT ILVDGLC+EG+V A
Sbjct: 281 E-----GVKMAYEMIELGCRFSEAT-----------------CEILVDGLCREGRVDDAC 318
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ ++ + V P+ Y SL++ C ++ +A ++
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 176/371 (47%), Gaps = 21/371 (5%)
Query: 5 LRLAVFIF--NRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTS 62
L L+VF + N+ H T + + ++ SL K+K + SL M++ ++S T
Sbjct: 110 LALSVFKWAENQKGFKHTTSN---YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TF 165
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+++ Y ++ A K+ + G++ ++ F ++ L + V A + D +
Sbjct: 166 ALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK 225
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ F D SY+IL + + + + R + + ++ +GF D V+Y I+IN CK
Sbjct: 226 KRFEPDIKSYTILLEGWGQEL----NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAK 281
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ + A++ ++E + +P ++ ++I+ L +K + DA + S TY
Sbjct: 282 KYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
AL+ +C ++++A + +DEM K + P+A T++I++ L + + K A V M
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE 401
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
M+ FC +L A ++ DEM K + P + FS L+ LC E K+ A
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 352 LGVMMKQGVKP 362
M+ G++P
Sbjct: 462 FNEMLDVGIRP 472
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 11/280 (3%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+++ + P I + +L + + ++ +M+ G ++V I+IN +C
Sbjct: 219 VFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHC 278
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A ++ ++ +P F +LI GL ++ AL+F + + GF L+
Sbjct: 279 KAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 131 SYSILTLKF--SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
+Y+ L + S+R+ + A + D++ +G + +Y I+++ L +M ++K A
Sbjct: 339 TYNALVGAYCWSQRM------EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
++ + + +P V Y ++ C + + A ++ EM K +LP + +++LI
Sbjct: 393 EVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
C +L EA E +EM+ I P + F+ L L EG+
Sbjct: 450 CHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 122/282 (43%), Gaps = 26/282 (9%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+KG++ T + LI+ L Q + DD+ A+ L + +++++ SRR
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALI----SRRYARA 175
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
V+ A+ + GF+++ ++ +++ L K A ++ K++ K +PD+ Y
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY 235
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T +++ ++ + + EM + P+V Y +I C + +EA +EM
Sbjct: 236 TILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQ 295
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+N P + F L++GL E K L +A E + +
Sbjct: 296 RNCKPSPHIFCSLINGLGSEKK---------------------LNDALEFFERSKSSGFP 334
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
+A T++ LV C +++ A + M +GV PN TY+
Sbjct: 335 LEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y +I+SL K K ++L +M +K++L T+ + + ++KEA +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
++ FN ++D L K V A+ V D+M K
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVF---------------------DKMKKKRF 228
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+PD +++IL++G +E + V M +G +P+VV Y +++ HC + +A
Sbjct: 229 EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 32/370 (8%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F + + H + ++ ++ ++ A+ L ++M + G+ N+V + L+
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR- 126
+ A V +++++ G +P+ T++ L+ L Q+ R D VV R
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRL----DGVVEISKRY 369
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ Q YS L S+ V A + D+ + + ++ SY ++ LC G+T
Sbjct: 370 MTQGIYSYLVRTLSKL----GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A+++L KI K V D +MY T+ +L K K ++ +L+ +M P++FTY LI
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
F VG++ EA + +E+ + PD ++N L++ L K G V
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV----------------- 528
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
EA EM K ++PD T+S L++ K +V+ A ++ M+ +G +PN+VT
Sbjct: 529 ----DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 367 YNSLMDGHCL 376
YN L+D CL
Sbjct: 585 YNILLD--CL 592
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 173/378 (45%), Gaps = 58/378 (15%)
Query: 45 SLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGL 104
S+ M S + N+ T +ILI + + + ++ K + ++ T+ L++
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSFTYKCLLQAY 213
Query: 105 CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGF 164
+ +A + ++ G +LD +Y++L ++ ++A Q +D+ +
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD-------EKACQVFEDMKKRHC 266
Query: 165 RLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
R D+ +Y+I+I + ++G+ A+ L ++ + + +VV Y T++ L K K+V A
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 225 LYSEMVSKRILPNVFTYTAL---------------------------IYGFCI-----VG 252
++S MV PN +TY+ L IY + + +G
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA---------KNVLGVMMIYG 303
+ EA L +M + + + ++ +++ LC GK A K V+ M+Y
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 304 --FCIVGQLKEAT---ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
F +G+LK+ + +L ++M PD +T++IL+ + G+V A N+ + +
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 359 GVKPNVVTYNSLMDGHCL 376
KP++++YNSL++ CL
Sbjct: 507 DCKPDIISYNSLIN--CL 522
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 150/334 (44%), Gaps = 40/334 (11%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLV---KMKHYPTAISLSHQMESSGIISNMVTSSI 64
A+ +F+R++ T P+ + +L LV ++ + +S + + GI S
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYS------Y 377
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+ LG + A + + + + ++ ++++ LC + A++ + +G
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHD---DVVAQGFRLDQVSYSILINGLCKM 181
D + Y+ + + +++ HD + G D +Y+ILI ++
Sbjct: 438 VVTDTMMYNTVFSALGK-------LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ A+ + ++E +PD++ Y ++I+ L K+ V +A + EM K + P+V TY
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
+ L+ F +++ A L +EM+ K P+ T+NIL+D L K G+
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT------------ 598
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
EA +L +M + + PD+ T+++L
Sbjct: 599 ---------AEAVDLYSKMKQQGLTPDSITYTVL 623
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 144/293 (49%), Gaps = 4/293 (1%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A+ + + R +P+ +++ + I L ME G + V+ + LI
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C G + A + + K G QP+ +TF TLI G C ++Q A + ++ A
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ V+Y+ L +S++ + A +F++D+V G + D ++Y+ LI GLCK +T+
Sbjct: 341 PNTVTYNTLINGYSQQ----GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q +++++ + + P+ ++ +I C K F LY M+ PN T+ L+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
FC A+++L EMV ++I D+ T + + +GL +GK + K +L M
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 170/404 (42%), Gaps = 45/404 (11%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKI-LTSLVKMKHYPTAIS-LSHQMESSGIISNMVTSSI 64
L++ FN +P +E I L +L K + + +A S L + + G+
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156
Query: 65 LINCYCHLGQIPFAFSVLAKILK--KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
L+ Y P F L K K ++ T TF + K V+ + ++
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLLG 215
Query: 123 QGFRLDQVSYSILTLKFSRRV----ISPTP---------------VQRALQFHDDVVAQG 163
QG R+D + L+F R + ISP P + + ++ D+ G
Sbjct: 216 QG-RVD------IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
FR VSY+ LI G C+ G AL+L + +QP+VV + T+I C+ + +A
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
++ EM + + PN TY LI G+ G + A ++MV I D T+N L+ GL
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 284 CKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
CK+ K + A + + +I G C+ EL M+ P+
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
TF++LV C+ GA VL M+++ + + T + + +G
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 25/334 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ ++SL+ A+ +M I N T +++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + + G++ +++ TLI G C + AL+ + + G + + V+++ L F R
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +Q A + ++ A + V+Y+ LING + G + A + + +Q
Sbjct: 321 AM----KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D++ Y +I LCK A E+ + ++PN T++ALI G C+ EL
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
M+ P+ TFN+LV C+ G A+++L EMV
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDG---------------------ASQVLREMV 475
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
++I D+ T + +GL +GK + K +L M
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P V + SL V A Y EM +I PN +T ++ G+C G+L + EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA---KNVLGV-----------MMIYGFCI 306
L +M ++N L+ G C++G + A KN++G +I+GFC
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+L+EA+++ EM N+ P+ T++ L++G ++G + A M+ G++ +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 367 YNSLMDGHCLVSEVNKA 383
YN+L+ G C ++ KA
Sbjct: 381 YNALIFGLCKQAKTRKA 397
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+L+L+F + P +L+ H +I+++ L K + K A +LR
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETH---------------AIVLHTLTKNRKFKSAESILRD 140
Query: 194 I--EGKLVQP----DVVMYT--------TIIDSLCKD----KLVTDAFNLYSEMVSKRIL 235
+ G + P D ++Y+ + DSL K K +A + + +M L
Sbjct: 141 VLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL 200
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV-KG--- 291
P V + A + G++ A EM I P+ YT N+++ G C+ GK+ KG
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 292 ----------AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
A +V +I G C G L A +L + M + P+ TF+ L+ G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
K++ A V G M V PN VTYN+L++G+
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 22/247 (8%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
+SS L+L N + ++ P+++ F ++ + A + +M++ + N V
Sbjct: 289 LSSALKLK----NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
T + LIN Y G AF ++ G Q D +T+ LI GLC A+ ++A QF ++
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+ + ++S L + R R + + ++ G ++ ++++L++ C+
Sbjct: 405 DKENLVPNSSTFSALIMGQCVR----KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC-------KDKLVTDAFNLYSEMVSKR 233
A Q+LR ++V+ + + + + +C KD+LV L EM K+
Sbjct: 461 NEDFDGASQVLR----EMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK---KLLQEMEGKK 513
Query: 234 ILPNVFT 240
L F
Sbjct: 514 FLQESFN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 144/293 (49%), Gaps = 4/293 (1%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A+ + + R +P+ +++ + I L ME G + V+ + LI
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C G + A + + K G QP+ +TF TLI G C ++Q A + ++ A
Sbjct: 281 AGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ V+Y+ L +S++ + A +F++D+V G + D ++Y+ LI GLCK +T+
Sbjct: 341 PNTVTYNTLINGYSQQ----GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A Q +++++ + + P+ ++ +I C K F LY M+ PN T+ L+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
FC A+++L EMV ++I D+ T + + +GL +GK + K +L M
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 170/404 (42%), Gaps = 45/404 (11%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKI-LTSLVKMKHYPTAIS-LSHQMESSGIISNMVTSSI 64
L++ FN +P +E I L +L K + + +A S L + + G+
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156
Query: 65 LINCYCHLGQIPFAFSVLAKILK--KGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
L+ Y P F L K K ++ T TF + K V+ + ++
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLLG 215
Query: 123 QGFRLDQVSYSILTLKFSRRV----ISPTP---------------VQRALQFHDDVVAQG 163
QG R+D + L+F R + ISP P + + ++ D+ G
Sbjct: 216 QG-RVD------IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
FR VSY+ LI G C+ G AL+L + +QP+VV + T+I C+ + +A
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
++ EM + + PN TY LI G+ G + A ++MV I D T+N L+ GL
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 284 CKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
CK+ K + A + + +I G C+ EL M+ P+
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
TF++LV C+ GA VL M+++ + + T + + +G
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 148/334 (44%), Gaps = 25/334 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ ++SL+ A+ +M I N T +++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + + G++ +++ TLI G C + AL+ + + G + + V+++ L F R
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +Q A + ++ A + V+Y+ LING + G + A + + +Q
Sbjct: 321 AM----KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D++ Y +I LCK A E+ + ++PN T++ALI G C+ EL
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
M+ P+ TFN+LV C+ G A+++L EMV
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDG---------------------ASQVLREMV 475
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
++I D+ T + +GL +GK + K +L M
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P V + SL V A Y EM +I PN +T ++ G+C G+L + EL
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA---KNVLGV-----------MMIYGFCI 306
L +M ++N L+ G C++G + A KN++G +I+GFC
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+L+EA+++ EM N+ P+ T++ L++G ++G + A M+ G++ +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 367 YNSLMDGHCLVSEVNKA 383
YN+L+ G C ++ KA
Sbjct: 381 YNALIFGLCKQAKTRKA 397
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+L+L+F + P +L+ H +I+++ L K + K A +LR
Sbjct: 96 LLSLEFFNWAKTRNPGSHSLETH---------------AIVLHTLTKNRKFKSAESILRD 140
Query: 194 I--EGKLVQP----DVVMYT--------TIIDSLCKD----KLVTDAFNLYSEMVSKRIL 235
+ G + P D ++Y+ + DSL K K +A + + +M L
Sbjct: 141 VLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL 200
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV-KG--- 291
P V + A + G++ A EM I P+ YT N+++ G C+ GK+ KG
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 292 ----------AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
A +V +I G C G L A +L + M + P+ TF+ L+ G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
K++ A V G M V PN VTYN+L++G+
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 22/247 (8%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
+SS L+L N + ++ P+++ F ++ + A + +M++ + N V
Sbjct: 289 LSSALKLK----NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
T + LIN Y G AF ++ G Q D +T+ LI GLC A+ ++A QF ++
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
+ + ++S L + R R + + ++ G ++ ++++L++ C+
Sbjct: 405 DKENLVPNSSTFSALIMGQCVR----KNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC-------KDKLVTDAFNLYSEMVSKR 233
A Q+LR ++V+ + + + + +C KD+LV L EM K+
Sbjct: 461 NEDFDGASQVLR----EMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK---KLLQEMEGKK 513
Query: 234 ILPNVFT 240
L F
Sbjct: 514 FLQESFN 520
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 166/373 (44%), Gaps = 35/373 (9%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I +L + ++ Y + L + +GI N++T +++ Y + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 82 LAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ P TF L+KGL N +++A++ +D+ +GF +D V YS L +
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG-- 245
Query: 141 RRVISPTPVQRALQFHDDVVAQ--GFRLDQVSYSILINGLCKMGQTKPALQLLRKI--EG 196
+ + L+ + ++ + GF D V Y L+ G K A++ + E
Sbjct: 246 --CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-----NVFTYTALIYGFCIV 251
V+ + Y ++++L ++ +A L+ + + P N+ T+ ++ G+C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G+ +EA E+ +M PD +FN L++ LC N L L
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLC--------DNEL-------------LA 402
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
EA +L EM KN+ PD YT+ +L+D KEGK+ M++ ++PN+ YN L
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 372 DGHCLVSEVNKAK 384
D +++ AK
Sbjct: 463 DQLIKAGKLDDAK 475
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
PSI F ++ LV + A+ + M G + + V S L+
Sbjct: 198 NPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLK 257
Query: 81 VLAKILKK--GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG--FRLDQVSYSILT 136
+ ++ +K G+ D + + L+KG + + A++ +++ V + R+ ++Y+ +
Sbjct: 258 LYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVL 317
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQG-----FRLDQVSYSILINGLCKMGQTKPALQLL 191
S AL+ D V + ++ ++++++NG C G+ + A+++
Sbjct: 318 EALSEN----GKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
R++ PD + + +++ LC ++L+ +A LY EM K + P+ +TY L+
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------IYG 303
G++ E MV N+ P+ +N L D L K GK+ AK+ +M+ Y
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYK 493
Query: 304 FCI-----VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
F + G+L E +++DEM +D D S + KE KG +
Sbjct: 494 FIMRALSEAGRLDEMLKIVDEM----LDDDTVRVSEELQEFVKEELRKGGR 540
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 169/377 (44%), Gaps = 20/377 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS + ++ +LVK A QM S G + T +ILI+ C G + A +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLK-FS 140
+ ++ ++G +P+ T+T LI G + +V AL+ + R+ +++ + T++ F
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALK-----QLEMMRVRKLNPNEATIRTFV 292
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ P +A + + + L +V Y ++ L K Q LRKI +
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD + + L K + + ++ VS+ + P Y L+ + E
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
L +M + Y++N ++D LCK +++ A L M + G+ +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G +K+ +L++++ PD TFS++++ LC+ ++K A + M++ G++PN +T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 367 YNSLMDGHCLVSEVNKA 383
YN L+ C + +++
Sbjct: 533 YNILIRSCCSTGDTDRS 549
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 182/430 (42%), Gaps = 45/430 (10%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S+ L LA F ++ P + ++ + K AI L QME G N+ T
Sbjct: 193 SNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFT 252
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ILI+ + G++ A L + + P+ T T + G+ +A + +
Sbjct: 253 YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFM 312
Query: 122 AQGFRLDQVSYSIL------------TLKFSRRVISPTPVQRALQFH------------- 156
+ L +V Y + T +F R++ + + F+
Sbjct: 313 EKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLV 372
Query: 157 ------DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
D V++G + Y +L+ L + + L+++ + V Y +I
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
D LCK + + +A +EM + I PN+ T+ + G+ + G +K+ +L++++
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLKEATEL 316
PD TF+++++ LC+ ++K A + M+ +G C G + +L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 317 LDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
+M + PD Y ++ + CK KVK A+ +L M++ G+KP+ TY++L+
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 377 VSEVNKAKDI 386
++A+++
Sbjct: 613 SGRESEAREM 622
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 129/316 (40%), Gaps = 52/316 (16%)
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL------ 135
L KI ++GY PD+ TF + L + + D V++G + Y +L
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 136 TLKFSRR-------------------------VISPTPVQRALQFHDDVVAQGFRLDQVS 170
+FS + ++ A F ++ +G + V+
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
++ ++G G K +L K+ +PDV+ ++ II+ LC+ K + DAF+ + EM+
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
I PN TY LI C G + +L +M + PD Y +N + CK KV
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV- 581
Query: 291 GAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
K+A ELL M+ + PD +T+S L+ L + G+ A+
Sbjct: 582 --------------------KKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 351 VLGVMMKQGVKPNVVT 366
+ + + G P+ T
Sbjct: 622 MFSSIERHGCVPDSYT 637
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 135/308 (43%), Gaps = 39/308 (12%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
IF+ + P + ++ +L+ + + QM G++S++ + + +I+C C
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+I A L ++ +G P+ +TF T + G + V++
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV----------------- 479
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+ +L + ++ GF+ D +++S++IN LC+ + K A
Sbjct: 480 -HGVL---------------------EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ ++P+ + Y +I S C + L+++M + P+++ Y A I FC
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
+ ++K+A ELL M+ + PD +T++ L+ L + G+ A+ + + +G
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Query: 311 KEATELLD 318
K E LD
Sbjct: 638 KRLVEELD 645
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 22/339 (6%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+LI + LG + V A+I G +P T + +I L + + A + +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + D+ +Y+IL ++ + V A++ + +G R + +Y+ILI+G G+
Sbjct: 210 GCKPDRFTYNILIHGVCKKGV----VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
AL+ L + + + P+ T + + + AF + + K Y A
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI----------------LVDGLCKEG 287
++Y KE + L ++ + PD+ TFN + DG G
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 288 KVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
G L +++ + E L +M + Y+++ ++D LCK +++
Sbjct: 386 VKPGFNGYL--VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A L M +G+ PN+VT+N+ + G+ + +V K +
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 148 PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
P+ +++ ++ G+R+ +LI ++G K + +I ++P +Y
Sbjct: 125 PLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYN 184
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
+ID+L K + A+ + +M S P+ FTY LI+G C G + EA L+ +M +
Sbjct: 185 AVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE 244
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
P+ +T+ IL+D GF I G++ EA + L+ M + ++P
Sbjct: 245 GNRPNVFTYTILID---------------------GFLIAGRVDEALKQLEMMRVRKLNP 283
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
+ T V G+ + A VL M++ V Y++++ +CL
Sbjct: 284 NEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCL 330
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 20/349 (5%)
Query: 56 ISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQ 115
+ ++ + L+N C + ++ A ++ + +G+ PD +TFTTLI G C +++ A +
Sbjct: 159 VPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHK 218
Query: 116 FHDDVVAQGFRLDQVSYSILTLKF--SRRVISPTPVQRAL-QFHDDVVAQGFRLDQVSYS 172
D++ G R + ++ S+L F R V + + + L ++ + + +++
Sbjct: 219 VFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMK--AAAFA 276
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
L++ +C+ G ++ + Y +IDSLC+ + A + M SK
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+ P +Y A+I+G C G A +LL+E P YT+ +L++ LCKE A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 293 KNVLGVMM---------IY-----GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+NVL +M+ IY G C++ E +L M+ + PD YT + +++G
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 339 LCKEGKVKGAKNVLGVMMK-QGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
LCK G+V A VL MM + P+ VT N++M G +A D+
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 176/398 (44%), Gaps = 30/398 (7%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
+F+ R H P ++ F ++ +++ A + +M GI N +T S+LI +
Sbjct: 184 LVFDMRNRGH-LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 70 CHLGQIPFAFSVLAKILK-KGYQPDT----ITFTTLIKGLCLNAQVQRALQFHDDV-VAQ 123
+ + ++ ++ + + DT F L+ +C + +++ + +
Sbjct: 243 LKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCE 302
Query: 124 GFRLD-QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
++ + I +L RR + ++ ++G + + SY+ +I+GLCK G
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK------SKGLKPRRTSYNAIIHGLCKDG 356
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
A QLL + P Y +++SLCK+ A N+ M+ K Y
Sbjct: 357 GCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYN 416
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
+ G C++ E +L M+ + PD YT N +++GLCK G+V A VL MM
Sbjct: 417 IYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTG 476
Query: 303 GFC---------------IVGQLKEATELLDEMVTKN-IDPDAYTFSILVDGLCKEGKVK 346
FC G+ +EA ++L+ ++ +N I P ++ ++ GL K K
Sbjct: 477 KFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD 536
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
A +V G + K V + TY ++DG C+ ++V+ AK
Sbjct: 537 EAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 160/361 (44%), Gaps = 20/361 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F ++ S+ + ++ ++ M ++ +I+ C + A ++ +
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
KG +P ++ +I GLC + RA Q ++ F + +Y +L + +
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE-LDT 393
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ L+ + +G ++ Y+I + GLC M L +L + +PD
Sbjct: 394 GKARNVLELM--LRKEGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRIL-PNVFTYTALIYGFCIVGQLKEATELLDEMV 265
T+I+ LCK V DA + +M++ + P+ T ++ G G+ +EA ++L+ ++
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 266 TKN-IDPDAYTFNILVDGLCKEGKVKGAKNVLG--------------VMMIYGFCIVGQL 310
+N I P +N ++ GL K K A +V G ++I G C+ ++
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
A + D+++ + DA+ ++ + GLC+ G + A + L + G PNVV YN++
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 371 M 371
+
Sbjct: 631 I 631
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 20/360 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+G ++ SL + + A + + M+S G+ + + +I+ C G A+ +L +
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ + P T+ L++ LC +A + ++ + D+ + L+ + +P
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLE-LMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI-EGKLVQPDVVM 205
T + L ++ R D+ + + +INGLCKMG+ A+++L + GK PD V
Sbjct: 429 TEILNVLV---SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVT 485
Query: 206 YTTIIDSLCKDKLVTDAFNLYSE-MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
T++ L +A ++ + M +I P V Y A+I G + + EA + ++
Sbjct: 486 LNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG--------------VMMIYGFCIVGQL 310
++ D+ T+ I++DGLC KV AK + G C G L
Sbjct: 546 EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYL 605
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+A L ++ P+ ++ ++ + G + A +L M K G P+ VT+ L
Sbjct: 606 SDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 62/357 (17%)
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +L + +GY+PD++ +++I LC + A + +A GF D+ + +++
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 138 K--FSRRVISPTPV-QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
+ +SR +S V R + F + V +Y+ L+N LC + + A +L+ +
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPS-----LTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
+ PDVV +TT+I C+ + + A ++ EM I PN T + LI GF + +
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 255 KEATELLDEMV-----TKNIDPDAYTFNILVDGLCKEG---------------------- 287
+ +L+ E+ + A F LVD +C+EG
Sbjct: 249 ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308
Query: 288 -------------KVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEM 320
+ GA ++ +M +I+G C G A +LL+E
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
P YT+ +L++ LCKE A+NVL +M+++ YN + G C++
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVM 425
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 6/232 (2%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAIS-LSHQMESSGIISNMVTSSILINCYCHLG 73
+L+ P ++ L KM A+ L M + VT + ++ G
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 74 QIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
+ A VL +++ + +P + + +I+GL + A+ + D +Y
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+I+ + V A +F DDV+ R D Y+ + GLC+ G A L
Sbjct: 558 AIIIDG----LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ P+VV Y T+I + L +A+ + EM P+ T+ L
Sbjct: 614 DLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 171/381 (44%), Gaps = 32/381 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS+ F IL LVK + +M +SGI ++ T IL+ +I F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + G P+ + + TL+ LC N +V RA ++ + V+++IL +
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYC- 259
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ + +++ + + GF D V+ + ++ LC G+ AL++L ++E K +
Sbjct: 260 ---NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
DVV T++ C + A + EM K LPNV TY LI G+C VG L A +
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------------MIYGFC 305
++M T I + TFN L+ GL G+ +L +M +IYGF
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFY 436
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
+ ++A E L +M + + P A S + LC++G + K M+ +G P+++
Sbjct: 437 KENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 366 TYNSLMDGHCLVSEVNKAKDI 386
HCL+ ++ I
Sbjct: 495 V------SHCLIHRYSQHGKI 509
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 167/352 (47%), Gaps = 29/352 (8%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P ++ K++ L A+ + ++ES G ++V + L+ YC LG++ A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT--LKF 139
++ +KGY P+ T+ LI G C + AL +D+ R + +++ L L
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
R + +Q D V G R+D Y+ +I G K + + AL+ L K+E KL
Sbjct: 401 GGRTDDGLKILEMMQDSDTV--HGARID--PYNCVIYGFYKENRWEDALEFLLKME-KLF 455
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
P V + + SLC+ + D Y +M+ + +P++ LI+ + G+++E+ E
Sbjct: 456 -PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 260 LLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDE 319
L+++MVT+ P + TFN ++ G CK+ KV + +++
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVM---------------------NGIKFVED 553
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
M + PD +++ L++ LC +G ++ A + M+++ + P+ ++SLM
Sbjct: 554 MAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 182/383 (47%), Gaps = 34/383 (8%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
P+ + + +L +L K A SL +M+ N VT +ILI+ YC+ ++ +
Sbjct: 214 APNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYCNEQKLIQSMV 269
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+L K G+ PD +T T +++ LC +V AL+ + V ++G ++D V+ + L +
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ ++ A +F ++ +G+ + +Y++LI G C +G AL ++ ++
Sbjct: 330 ----ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR 385
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK------RILPNVFTYTALIYGFCIVGQL 254
+ + T+I L D + M RI P Y +IYGF +
Sbjct: 386 WNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRW 441
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------IYGFCI 306
++A E L +M + + P A + + LC++G + K M+ I C+
Sbjct: 442 EDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 307 V------GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+ G+++E+ EL+++MVT+ P + TF+ ++ G CK+ KV + M ++G
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 361 KPNVVTYNSLMDGHCLVSEVNKA 383
P+ +YN L++ C+ ++ KA
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKA 582
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 32/334 (9%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQR 112
G I + T L + C + + +L ++ G PD F T+I+G ++R
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 113 ALQFHDDVVAQGFRLD-QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSY 171
+ D V G + +V SIL + + + R F ++A G D +Y
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDI----DIAREF-FTRKMMASGIHGDVYTY 185
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
IL+ GL + +LL+ ++ V P+ V+Y T++ +LCK+ V A +L SEM
Sbjct: 186 GILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE 245
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
PN T+ LI +C +L ++ LL++ + PD T +++ LC EG+V
Sbjct: 246 ----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS- 300
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
EA E+L+ + +K D + LV G C GK++ A+
Sbjct: 301 --------------------EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
M ++G PNV TYN L+ G+C V ++ A D
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G D + +I G + K + ++ + ++P + ++ +I+D L K+ +
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAR 166
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+M++ I +V+TY L+ G + ++ + +LL M T + P+A +N L+
Sbjct: 167 EFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHA 226
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
LCK GKV A++++ ++KE P+ TF+IL+ C E
Sbjct: 227 LCKNGKVGRARSLMS-----------EMKE--------------PNDVTFNILISAYCNE 261
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K+ + +L G P+VVT +M+ C V++A ++
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
TY AL + C+ + +LLDEM + PD F ++ G G+ + K V+ V
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGF---GRARLIKRVISV 134
Query: 299 M-MIYGFCIVGQLKEATELLDEMVTKNID----------------PDAYTFSILVDGLCK 341
+ ++ F I LK +LD +V ++ID D YT+ IL+ GL
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSL 194
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ +L +M GV PN V YN+L+ C +V +A+ +
Sbjct: 195 TNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSL 239
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++ +L+ +D+V +G+ +++ +I G CK + ++ + + + PD Y
Sbjct: 509 IEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNP 568
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ LC + A+ L+S MV K I+P+ +++L+ FC+
Sbjct: 569 LLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCL 608
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 189/421 (44%), Gaps = 70/421 (16%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F L T PS+I + +L ++ K Y + S+ ++E SG + + + +IN
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG--- 124
+ G + A L K+ + G P T T+ TLIKG + + +R+ + D ++ +G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS------------ 172
+ ++++L + ++ V+ A + + G R D V+Y+
Sbjct: 184 VGPNIRTFNVLVQAWCKK----KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 173 -------------------------ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
I++ G C+ G+ + L+ +R+++ V+ ++V++
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 208 TIIDSLCK--DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
++I+ + D+ D + + M + +V TY+ ++ + G +++A ++ EMV
Sbjct: 300 SLINGFVEVMDRDGID--EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
+ PDA+ ++IL G + + K+A ELL+ ++ ++
Sbjct: 358 KAGVKPDAHAYSILAKGYVR---------------------AKEPKKAEELLETLIVES- 395
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
P+ F+ ++ G C G + A V M K GV PN+ T+ +LM G+ V + KA++
Sbjct: 396 RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEE 455
Query: 386 I 386
+
Sbjct: 456 V 456
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 155/341 (45%), Gaps = 23/341 (6%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+N G+ A +V + + G++P I++TTL+ + + Q +V G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+LD + ++ + FS VQ L+ + G +Y+ LI G G+
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKE----LGLNPTTSTYNTLIKGYGIAGKP 166
Query: 185 KPALQLLRKI--EGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ + +LL + EG + V P++ + ++ + CK K V +A+ + +M + P+ TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 242 TALIYGFCIVGQ-LKEATELLDEMVTKN-IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+ + G+ ++ +E++++MV K P+ T I+V G C+EG+V+ + M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 300 --------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
+I GF V E+L M N+ D T+S +++ G +
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ A V M+K GVKP+ Y+ L G+ E KA+++
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 135/301 (44%), Gaps = 46/301 (15%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I F ++ + K K A + +ME G+ + VT + + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 82 LAK--ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD--------------DVVAQGF 125
+ + ++K+ +P+ T ++ G C +V+ L+F + + GF
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 126 ---------------------RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGF 164
+ D ++YS + +S S +++A Q ++V G
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS----SAGYMEKAAQVFKEMVKAGV 361
Query: 165 RLDQVSYSILINGLCKMGQTKPALQLLRK--IEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
+ D +YSIL G + + K A +LL +E + P+VV++TT+I C + + DA
Sbjct: 362 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDA 418
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
++++M + PN+ T+ L++G+ V Q +A E+L M + P+ TF +L +
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Query: 283 L 283
Sbjct: 479 W 479
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
+++++ G P+++ T I LC NA+ A D++ L+ ++ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK-- 197
R + L+ D+V R D V+ ILIN LCK + AL++ K+ GK
Sbjct: 305 GRNMDISRMNDLVLKM-DEV---KIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRT 360
Query: 198 ----LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIYGFCIVG 252
+++ D + + T+ID LCK + +A L M + +R PN TY LI G+C G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAG 420
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLC----------------KEGKVKGAKNVL 296
+L+ A E++ M I P+ T N +V G+C KEG VKG NV+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKG--NVV 477
Query: 297 GVM-MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
M +I+ C V +++A ++M+ PDA + L+ GLC+ + A V+ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 356 MKQGVKPNVVTYNSLMDGHC 375
+ G +++ YN L+ C
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC 557
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 62/379 (16%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F +L+ L + L +M+ I ++VT ILIN C ++ A V K+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 87 KKG------YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
K + D+I F TLI GLC +++ A + ++ +K
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL-----------------LVRMKLE 399
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R +P + V+Y+ LI+G C+ G+ + A +++ +++ ++
Sbjct: 400 ERC-AP--------------------NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+VV TI+ +C+ + A + +M + + NV TY LI+ C V +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 261 LDEMVTKNIDPDAYTFNILVDGLC---------------KEGKVKGAKNVLGVMMIYG-F 304
++M+ PDA + L+ GLC KEG + ++L M+ G F
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF--SLDLLAYNMLIGLF 556
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C ++ E+L +M + PD+ T++ L+ K + + ++ M + G+ P V
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 365 VTYNSLMDGHCLVSEVNKA 383
TY +++D +C V E+++A
Sbjct: 617 TTYGAVIDAYCSVGELDEA 635
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 155/369 (42%), Gaps = 61/369 (16%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A + +R+ P+++ I+ + + A+ ME G+ N+VT
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ C + + A K+L+ G PD + LI GLC QV+R HD
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRD---HD------ 529
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
A++ + + GF LD ++Y++LI C T
Sbjct: 530 ---------------------------AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ ++L +E + +PD + Y T+I K K + +M + P V TY A+
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 245 IYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
I +C VG+L EA +L +M + ++P+ +NIL++ K
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK------------------ 664
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
+G +A L +EM K + P+ T++ L L ++ + + ++ M++Q +PN
Sbjct: 665 ---LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 364 VVTYNSLMD 372
+T LM+
Sbjct: 722 QITMEILME 730
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L+ + V P+ V T I SLCK+ A+++ S+++ + + AL+
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
+ +L+ +M I PD T IL++ LCK +V A V M
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 300 ------------MIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFSILVDGLCKEGKVK 346
+I G C VG+LKEA ELL M + + P+A T++ L+DG C+ GK++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
AK V+ M + +KPNVVT N+++ G C +N A
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 31/320 (9%)
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
+++++ G P+++ T I LC NA+ A D++ L+ ++ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK-- 197
R + L+ D+V R D V+ ILIN LCK + AL++ ++ GK
Sbjct: 305 GRNMDISRMNDLVLKM-DEV---KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 198 ----LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIYGFCIVG 252
+++ D + + T+ID LCK + +A L M + +R +PN TY LI G+C G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLC----------------KEGKVKGAKNVL 296
+L+ A E++ M I P+ T N +V G+C KEG VKG NV+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKG--NVV 477
Query: 297 GVM-MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
M +I+ C V +++A ++M+ PDA + L+ GLC+ + A V+ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 356 MKQGVKPNVVTYNSLMDGHC 375
+ G +++ YN L+ C
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC 557
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 164/348 (47%), Gaps = 27/348 (7%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQME-SSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
I F ++ L K+ A L +M+ + N VT + LI+ YC G++ A V++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++ + +P+ +T T++ G+C + + A+ F D+ +G + + V+Y L
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI----HAC 486
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
S + V++A+ +++ ++ G D Y LI+GLC++ + A++++ K++ D+
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
+ Y +I C + + ++M + P+ TY LI F + ++++
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM-VT 322
M +DP T+ ++D +C VG+L EA +L +M +
Sbjct: 607 MREDGLDPTVTTYGAVIDA---------------------YCSVGELDEALKLFKDMGLH 645
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
++P+ ++IL++ K G A ++ M + V+PNV TYN+L
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 62/379 (16%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F +L+ L + L +M+ I ++VT ILIN C ++ A V ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 87 KKG------YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
K + D+I F TLI GLC +++ A + ++ +K
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL-----------------LVRMKLE 399
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R + + V+Y+ LI+G C+ G+ + A +++ +++ ++
Sbjct: 400 ERCVP---------------------NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+VV TI+ +C+ + A + +M + + NV TY LI+ C V +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 261 LDEMVTKNIDPDAYTFNILVDGLC---------------KEGKVKGAKNVLGVMMIYG-F 304
++M+ PDA + L+ GLC KEG + ++L M+ G F
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF--SLDLLAYNMLIGLF 556
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C ++ E+L +M + PD+ T++ L+ K + + ++ M + G+ P V
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 365 VTYNSLMDGHCLVSEVNKA 383
TY +++D +C V E+++A
Sbjct: 617 TTYGAVIDAYCSVGELDEA 635
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 7/288 (2%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A + +R+ P+++ I+ + + A+ ME G+ N+VT
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ C + + A K+L+ G PD + LI GLC + A++ + + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
F LD ++Y++L F + ++ + D+ +G + D ++Y+ LI+ K
Sbjct: 542 FSLDLLAYNMLIGLFCDK----NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTA 243
+ +++ ++ + P V Y +ID+ C + +A L+ +M + ++ PN Y
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
LI F +G +A L +EM K + P+ T+N L C K +G
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEKTQG 703
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L+ + V P+ V T I SLCK+ A+++ S+++ + + AL+
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
+ +L+ +M I PD T IL++ LCK +V A V M
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 300 ------------MIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFSILVDGLCKEGKVK 346
+I G C VG+LKEA ELL M + + P+A T++ L+DG C+ GK++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
AK V+ M + +KPNVVT N+++ G C +N A
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 5/225 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A++ + ++L +P + +++ L +++ AI + +++ G +++ ++LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + +L + K+G +PD+IT+ TLI + + + + + G
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQ-FHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+Y + + S + AL+ F D + + V Y+ILIN K+G
Sbjct: 615 TVTTYGAVIDAYC----SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
AL L +++ K+V+P+V Y + L + L EMV
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 31/320 (9%)
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
+++++ G P+++ T I LC NA+ A D++ L+ ++ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK-- 197
R + L+ D+V R D V+ ILIN LCK + AL++ ++ GK
Sbjct: 305 GRNMDISRMNDLVLKM-DEV---KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 198 ----LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIYGFCIVG 252
+++ D + + T+ID LCK + +A L M + +R +PN TY LI G+C G
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLC----------------KEGKVKGAKNVL 296
+L+ A E++ M I P+ T N +V G+C KEG VKG NV+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKG--NVV 477
Query: 297 GVM-MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
M +I+ C V +++A ++M+ PDA + L+ GLC+ + A V+ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 356 MKQGVKPNVVTYNSLMDGHC 375
+ G +++ YN L+ C
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC 557
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 168/379 (44%), Gaps = 62/379 (16%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
F +L+ L + L +M+ I ++VT ILIN C ++ A V ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 87 KKG------YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
K + D+I F TLI GLC +++ A + ++ +K
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL-----------------LVRMKLE 399
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R + + V+Y+ LI+G C+ G+ + A +++ +++ ++
Sbjct: 400 ERCVP---------------------NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
P+VV TI+ +C+ + A + +M + + NV TY LI+ C V +++A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 261 LDEMVTKNIDPDAYTFNILVDGLC---------------KEGKVKGAKNVLGVMMIYG-F 304
++M+ PDA + L+ GLC KEG + ++L M+ G F
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF--SLDLLAYNMLIGLF 556
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C ++ E+L +M + PD+ T++ L+ K + + ++ M + G+ P V
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 365 VTYNSLMDGHCLVSEVNKA 383
TY +++D +C V E+++A
Sbjct: 617 TTYGAVIDAYCSVGELDEA 635
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 172/387 (44%), Gaps = 66/387 (17%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQME-SSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
I F ++ L K+ A L +M+ + N VT + LI+ YC G++ A V++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++ + +P+ +T T++ G+C + + A+ F D+ +G + + V+Y L
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI----HAC 486
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI--------- 194
S + V++A+ +++ ++ G D Y LI+GLC++ + A++++ K+
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 195 ----------------------------EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
EGK +PD + Y T+I K K +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK--KPDSITYNTLISFFGKHKDFESVERMM 604
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFNILVDGLCK 285
+M + P V TY A+I +C VG+L EA +L +M + ++P+ +NIL++ K
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 286 EGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
+G +A L +EM K + P+ T++ L L ++ +
Sbjct: 665 ---------------------LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+ ++ M++Q +PN +T LM+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 26/336 (7%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A + +R+ P+++ I+ + + A+ ME G+ N+VT
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ C + + A K+L+ G PD + LI GLC + A++ + + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
F LD ++Y++L F + ++ + D+ +G + D ++Y+ LI+ K
Sbjct: 542 FSLDLLAYNMLIGLFCDK----NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTA 243
+ +++ ++ + P V Y +ID+ C + +A L+ +M + ++ PN Y
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
LI F +G +A L +EM K + P+ T+N L C K +G
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEKTQG------------ 703
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+ +L+DEMV ++ +P+ T IL++ L
Sbjct: 704 -------ETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+ L+ + V P+ V T I SLCK+ A+++ S+++ + + AL+
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
+ +L+ +M I PD T IL++ LCK +V A V M
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 300 ------------MIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFSILVDGLCKEGKVK 346
+I G C VG+LKEA ELL M + + P+A T++ L+DG C+ GK++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
AK V+ M + +KPNVVT N+++ G C +N A
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 34/306 (11%)
Query: 87 KKGYQPDTITFTTLIKGLCLN-----AQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ ++P TF L+ C + V R L +V G DQV+ I R
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAV----R 167
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL-VQ 200
+ V A ++ + D +Y+ L+ LCK + + ++ V+
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+V +T +ID++C K + +A L S++ + P+ F Y ++ GFC + + EA +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
+M + ++PD T+N L+ GL K G+V+ A+ L M+ G+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY---------------- 331
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
+PD T++ L++G+C++G+ GA ++L M +G PN TYN+L+ G C +
Sbjct: 332 -----EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 381 NKAKDI 386
+K ++
Sbjct: 387 DKGMEL 392
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 166/382 (43%), Gaps = 60/382 (15%)
Query: 9 VFIFNRLLRTHPT--PSIIEFGKILTSLVKMKHYPTAISLSHQ----MESSGIISNMVTS 62
V +F +L++ P P F +L+ + ++IS H+ M ++G+ + VT+
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPD--SSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
I + C G++ A ++ ++ +K PDT T+ L+K LC + +F D
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD---- 218
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ DD + D VS++ILI+ +C
Sbjct: 219 -------------------------------EMRDDF---DVKPDLVSFTILIDNVCNSK 244
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A+ L+ K+ +PD +Y TI+ C ++A +Y +M + + P+ TY
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
LI+G G+++EA L MV +PD T+ L++G+C++G+ GA ++L M
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Query: 300 -----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
+++G C + + EL + M + + ++ ++ LV L K GKV A
Sbjct: 365 GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Query: 349 KNVLGVMMKQGVKPNVVTYNSL 370
V + + Y++L
Sbjct: 425 YEVFDYAVDSKSLSDASAYSTL 446
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S LR A+++ ++L P + I+ + A+ + +M+ G+ + +T
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ LI G++ A L ++ GY+PDT T+T+L+ G+C + AL +++
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
A+G + +Y+ L + + + + ++ ++ + + G +L+ Y+ L+ L K
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARL----MDKGMELYEMMKSSGVKLESNGYATLVRSLVKS 418
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
G+ A ++ D Y+T+ +L
Sbjct: 419 GKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 194/444 (43%), Gaps = 91/444 (20%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F L T PS+I + +L ++ K Y + S+ ++E SG + + + +IN
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG--- 124
+ G + A L K+ + G P T T+ TLIKG + + +R+ + D ++ +G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS------------ 172
+ ++++L + ++ V+ A + + G R D V+Y+
Sbjct: 184 VGPNIRTFNVLVQAWCKK----KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 173 -------------------------ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
I++ G C+ G+ + L+ +R+++ V+ ++V++
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 208 TIIDSLCK--DK---------LVTDAFNLYSEMVSKR--------------ILPNVFTYT 242
++I+ + D+ L+ +FN E+V + + +V TY+
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYS 359
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
++ + G +++A ++ EMV + PDA+ ++IL G +
Sbjct: 360 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR----------------- 402
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
+ K+A ELL+ ++ ++ P+ F+ ++ G C G + A V M K GV P
Sbjct: 403 ----AKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP 457
Query: 363 NVVTYNSLMDGHCLVSEVNKAKDI 386
N+ T+ +LM G+ V + KA+++
Sbjct: 458 NIKTFETLMWGYLEVKQPWKAEEV 481
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 158/366 (43%), Gaps = 48/366 (13%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L+N G+ A +V + + G++P I++TTL+ + + Q +V G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+LD + ++ + FS VQ L+ + G +Y+ LI G G+
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKE----LGLNPTTSTYNTLIKGYGIAGKP 166
Query: 185 KPALQLLRKI--EGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ + +LL + EG + V P++ + ++ + CK K V +A+ + +M + P+ TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 242 TALIYGFCIVGQ-LKEATELLDEMVTKN-IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+ + G+ ++ +E++++MV K P+ T I+V G C+EG+V+ + M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 300 --------------MIYGFC-------------------------IVGQLKEATELLDEM 320
+I GF +VG K ++L M
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLM 346
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
N+ D T+S +++ G ++ A V M+K GVKP+ Y+ L G+ E
Sbjct: 347 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 406
Query: 381 NKAKDI 386
KA+++
Sbjct: 407 KKAEEL 412
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 142/341 (41%), Gaps = 45/341 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P+I F ++ + K K A + +ME G+ + VT + + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 82 LAK--ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD--------------DVVAQGF 125
+ + ++K+ +P+ T ++ G C +V+ L+F + + GF
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 126 -------RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
+D+V+ ++L + F+ V + +Q + + D ++YS ++N
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
G + A Q+ +++ V+PD Y+ + + K A L ++ + PNV
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
+T +I G+C G + +A + ++M + P+ TF L
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL------------------- 465
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
++G+ V Q +A E+L M + P+ TF +L +
Sbjct: 466 --MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 31/324 (9%)
Query: 39 HYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK---GYQPDTI 95
Y L +M G + T ++LI C G+ A + + +K Y+P
Sbjct: 164 EYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVVQFMKSKTFNYRPFKH 220
Query: 96 TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF 155
++ ++ L Q + + ++ GF D ++Y+IL R + R +
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYR----LGKMDRFDRL 276
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
D++ GF D +Y+IL++ L K + AL L ++ + P V+ YTT+ID L +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
+ EMV P+V YT +I G+ + G+L +A E+ EM K P+ +T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+N MI G C+ G+ +EA LL EM ++ +P+ +S L
Sbjct: 397 YN---------------------SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQG 359
V L K GK+ A+ V+ M+K+G
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKG 459
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 157 DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD 216
D++V GF ++++LI + G K A+ K + +P Y I++SL
Sbjct: 173 DEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGV 232
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
K +Y +M+ P+V TY L++ +G++ L DEM PD+YT+
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 277 NILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVT 322
NIL+ L K K A L M +I G G L+ LDEMV
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK 352
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
PD +++++ G G++ AK + M +G PNV TYNS++ G C+ E +
Sbjct: 353 AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412
Query: 383 A 383
A
Sbjct: 413 A 413
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + IL SL+ +K Y + QM G +++T +IL+ LG++ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ + G+ PD+ T+ L+ L + AL + + G + Y+ L SR
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ F D++V G R D V Y+++I G G+ A ++ R++ K P
Sbjct: 337 ----AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+V Y ++I LC +A L EM S+ PN Y+ L+ G+L EA +++
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Query: 262 DEMVTK 267
EMV K
Sbjct: 453 REMVKK 458
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 35/369 (9%)
Query: 19 HPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFA 78
H + S++ + +IL L KM+ + + +M N T +L+N Y ++ A
Sbjct: 139 HLSSSML-YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEA 197
Query: 79 FSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQ--------RALQFHDDVVAQGFRLDQV 130
V + + G D + F L+ LC V+ R +F D+ A L+
Sbjct: 198 VGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILN-- 255
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+ +L V A +F D++A R D VSY +IN L K G+ A++L
Sbjct: 256 GWCVLG-----------NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
R + PDV + +ID+LC K + +A ++ E+ K PNV TY +L+ C
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 251 VGQLKEATELLDEMVTK--NIDPDAYTFNILVDGLCKEGKV-----KGAKNV------LG 297
+ + ++ EL++EM K + P+ TF+ L+ + V + AKN L
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLY 424
Query: 298 VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
+M + + ++ E+ EM + PD T++I + GL +GK+ A + MM
Sbjct: 425 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMS 484
Query: 358 QGVKPNVVT 366
+G+ P T
Sbjct: 485 KGMVPEPRT 493
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 149 VQRALQFH---DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
++R +FH D++ + +++ +Y +L+N + A+ + + + + D+V
Sbjct: 156 MRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVA 215
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+ ++ LC+ K V A L+ + ++ ++ G+C++G + EA +++
Sbjct: 216 FHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDII 274
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
PD ++ +++ L K+GK L +A EL M
Sbjct: 275 ASKCRPDVVSYGTMINALTKKGK---------------------LGKAMELYRAMWDTRR 313
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
+PD + ++D LC + ++ A V + ++G PNVVTYNSL+ C + K +
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWE 373
Query: 386 I 386
+
Sbjct: 374 L 374
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 47/306 (15%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISL--SHQMESSGIISNMVTSSIL 65
AV +F R ++ F +L L + KH A +L S + E I M +++
Sbjct: 197 AVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM---NMI 253
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF 125
+N +C LG + A I+ +PD +++ T+I L ++ +A++ + +
Sbjct: 254 LNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR 313
Query: 126 RLD-QVSYSIL-TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
D ++ +++ L F +R+ AL+ ++ +G + V+Y+ L+ LCK+ +
Sbjct: 314 NPDVKICNNVIDALCFKKRI------PEALEVFREISEKGPDPNVVTYNSLLKHLCKIRR 367
Query: 184 TKPALQLLRKIE--GKLVQPDVVMYT-------------TIIDSLCKDK--LVTDAFNL- 225
T+ +L+ ++E G P+ V ++ +++ + K+K + +D +NL
Sbjct: 368 TEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 226 ----------------YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+SEM + P+ TYT I+G G++ EA EM++K +
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Query: 270 DPDAYT 275
P+ T
Sbjct: 488 VPEPRT 493
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
++Y I+D L K + + ++ EM + N TY L+ + ++ EA + +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV-------------MMIYGFCIVGQL 310
ID D F+ L+ LC+ V+ A+ + M++ G+C++G +
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
EA +++ PD ++ +++ L K+GK+ A + M P+V N++
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 371 MDGHCLVSEVNKAKDI 386
+D C + +A ++
Sbjct: 324 IDALCFKKRIPEALEV 339
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 26/313 (8%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF- 116
+ T +ILI+ G A + +++KK +P +TF TLI GLC +++V+ AL+
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 117 HDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILIN 176
HD + G R Y+ L + + + A + D+ ++D YS LI+
Sbjct: 211 HDMLKVYGVRPTVHIYASLI----KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 177 GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP 236
L K G++ +L ++ K +PD V Y +I+ C + A + EMV K + P
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
+V +Y ++ F + + +EAT L ++M + PD ++ I+ DGLC+ + + A +L
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 297 GVMMIYGF--------------CIVGQLKEATELLDEMVT---KNIDPDAYTFSILVDGL 339
M+ G+ C G+L E+L ++++ + I DA +S+++ +
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKL----EILSKVISSLHRGIAGDADVWSVMIPTM 442
Query: 340 CKEGKVKGAKNVL 352
CKE + + ++L
Sbjct: 443 CKEPVISDSIDLL 455
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 28/275 (10%)
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
+PD T+ LI G + AL+ D++V + + V++ L + + V+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK----DSRVK 204
Query: 151 RALQF-HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI-EGKLVQPDVVMYTT 208
AL+ HD + G R Y+ LI LC++G+ A +L + EGK ++ D +Y+T
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK-IKVDAAIYST 263
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I SL K + + EM K P+ TY LI GFC+ + A +LDEMV K
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
+ PD ++N+ +LGV F + + +EAT L ++M + PD
Sbjct: 324 LKPDVISYNM----------------ILGV-----FFRIKKWEEATYLFEDMPRRGCSPD 362
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
++ I+ DGLC+ + + A +L M+ +G KP
Sbjct: 363 TLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D +Y+ILI+G + G AL+L ++ K V+P V + T+I LCKD V +A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 227 SEMVS-KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
+M+ + P V Y +LI C +G+L A +L DE I DA ++ L+ L K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 286 EGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
G+ E + +L+EM K PD T+++L++G C E
Sbjct: 271 AGRSN---------------------EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ A VL M+++G+KP+V++YN ++
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMIL 335
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 52/274 (18%)
Query: 164 FRLDQVSYSILIN--GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
FR + Y I+I G KM + L K + ++V P +++ +I+ + KL +
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIV-PTEIIFCNVINFFGRGKLPSR 101
Query: 222 AFNLYSEMVSKRIL----------------------------------PNVFTYTALIYG 247
A +++ EM R P+ TY LI+G
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHG 161
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM-IYG--- 303
G +A +L DEMV K + P TF L+ GLCK+ +VK A + M+ +YG
Sbjct: 162 CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRP 221
Query: 304 -----------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
C +G+L A +L DE I DA +S L+ L K G+ +L
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 353 GVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++G KP+ VTYN L++G C+ ++ A +
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 137/293 (46%), Gaps = 12/293 (4%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQM-ESSGIISNMVTSSILI 66
A+ +F+ +++ P+ + FG ++ L K A+ + H M + G+ + + LI
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
C +G++ FAF + + + + D ++TLI L + +++ +G +
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D V+Y++L F S + A + D++V +G + D +SY++++ ++ + +
Sbjct: 291 PDTVTYNVLINGFCVENDS----ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A L + + PD + Y + D LC+ +A + EM+ K P +
Sbjct: 347 ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ 406
Query: 247 GFCIVGQLKEATELLDEMVT---KNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
C G+L E+L ++++ + I DA +++++ +CKE + + ++L
Sbjct: 407 KLCESGKL----EILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 21/356 (5%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMES-SGIISNMVTSSILINCYCHLGQIPFAFSV 81
S+ E+ +++ L KM+ + TA +L +M S + N T I+I YC + + A +
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINT 219
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRA--LQFHDDVVAQGFRLDQVSYSILTLKF 139
+ + F +L+ LC V A L F + + D S++I+ +
Sbjct: 220 FHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN---KDKYPFDAKSFNIVLNGW 276
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
+ SP +R +V G + D VSYS +I+ K G L+L +++ + +
Sbjct: 277 CNVIGSPREAERVWMEMGNV---GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR-ILPNVFTYTALIYGFCIVGQLKEAT 258
+PD +Y ++ +L K V++A NL M ++ I PNV TY +LI C + +EA
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 259 ELLDEMVTKNIDPDAYTFN----ILVDG------LCKEGKVKGAKNVLG-VMMIYGFCIV 307
++ DEM+ K + P T++ IL G L K K+ V +M+I C
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
L DEM K + PD ++ +++ GL GK++ A M +G++PN
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 24/245 (9%)
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQL---LRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
QG+ Y +I+ L KM + A L +RK LV ++ +I C
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLL--IMIRKYCAVHD 212
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFN 277
V A N + ++ + + +L+ C + +A L+ K+ P DA +FN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 278 ILVDGLCKE-GKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVT 322
I+++G C G + A+ V M MI + G L + +L D M
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMDGHCLVSEVN 381
+ I+PD ++ +V L K V A+N++ M ++ G++PNVVTYNSL+ C +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 382 KAKDI 386
+AK +
Sbjct: 391 EAKQV 395
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 20/151 (13%)
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
+A ++ EM + + +V +Y+++I + G L + +L D M + I+PD +N +V
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 281 DGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
L K V A+N++ M K I+P+ T++ L+ LC
Sbjct: 345 HALAKASFVSEARNLMKTME--------------------EEKGIEPNVVTYNSLIKPLC 384
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
K K + AK V M+++G+ P + TY++ M
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 168/358 (46%), Gaps = 20/358 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +++ L K + + T +S+ +M + G+++ M T +I + + + A + +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K ++ T L+ L A++ + Q D + + F + ++Y++L + R
Sbjct: 257 KYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----V 311
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A + +D++ QG + D V++++++ GL + + A++L ++ K P+V Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T +I CK + A + +MV + P+ YT LI GF +L ELL EM
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM-------IYGFCIV-------GQLKE 312
K PD T+N L+ + + + A + M+ I+ F ++ +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+ +EM+ K I PD ++++L+ GL EGK + A L M+ +G+K ++ YN
Sbjct: 492 GRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
D + + F + ++Y++L+NG C++ A ++ + + ++PD+V + +++ L + +
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+DA L+ M SK PNV +YT +I FC ++ A E D+MV + PDA +
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 278 ILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL--------------KEATELLDEMVTK 323
L+ G + K+ +L M G G+ + AT + ++M+
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
I+P +TF++++ + + V M+K+G+ P+ +Y L+ G
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 39/281 (13%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A I+N ++ P I+ +L L++ + AI L H M+S G N+ + +I+I
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + A ++ G QPD +T LI G +L
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-----------------KL 419
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y +L ++ +G D +Y+ LI + + A
Sbjct: 420 DTV-YELLK---------------------EMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ K+ ++P + + I+ S + ++ EM+ K I P+ +YT LI G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
G+ +EA L+EM+ K + +N + G+
Sbjct: 518 LIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 24/262 (9%)
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQV--------SYSILINGLCKMGQT-KPALQLL-RKI 194
+P V+R + D++ A ++ V S+ +++ L + KPA +
Sbjct: 127 NPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAA 186
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E + D Y +++ L K + ++ EM +K +L + T+T + F +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLC-----KEGKV---KGAKNVLGVMMIY---- 302
K+A + + M T N L+D L KE +V K + MM Y
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 303 -GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G+C V L EA + ++M+ + + PD +++++GL + K A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 362 PNVVTYNSLMDGHCLVSEVNKA 383
PNV +Y ++ C S + A
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETA 387
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
R A+ + + +LR PS + ++ + ++ A+ + +M +G+ ++VT +I
Sbjct: 194 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 253
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+++ Y Q A S + +PDT TF +I L Q +AL + + +
Sbjct: 254 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 125 F--RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
R D V+++ + +S + ++ + +VA+G + + VSY+ L+ G
Sbjct: 314 AECRPDVVTFTSIMHLYSVK----GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ AL +L I+ + PDVV YT +++S + + A ++ M +R PNV TY
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
ALI + G L EA E+ +M I P+ + L+ + K VL
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 489
Query: 303 G--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC-------- 340
G + +L++A L M K + D+ TF+IL+ G C
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 341 ---------------------------KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
K+G+V A+++ M G +P+V+ Y S++
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 374 HCLVSEVNKA 383
+ + KA
Sbjct: 610 YNASEKWGKA 619
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 176/412 (42%), Gaps = 55/412 (13%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F ++ P+I+ + ++ + TA+S+ ++ +GII ++V+ + L+N Y
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
Q A V + K+ +P+ +T+ LI N + A++ + G + + V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 131 SYSILTLKFSRR-------------------------------VISPTPVQRALQFHDDV 159
S L SR I+ +++A+ + +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 160 VAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLV 219
+ + D V+++ILI+G C+M + A+ L+++E + +Y++++ + K V
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
T+A +++++M P+V YT++++ + + +A EL EM I+PD+ + L
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 280 VDGLCKEGKVKGAKNVL--------------GVMMIYGFCIVGQLKEATELLDEMVTKNI 325
+ K G+ NV G + F L+E +D + + +
Sbjct: 642 MRAFNKGGQ---PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID--LIQMM 696
Query: 326 DPDAYTFSI-----LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
DP + SI ++ K GKV+ + ++ GV N+ TY L++
Sbjct: 697 DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 748
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D +Y LIN + GQ + A+ L+ + + P Y +I++ +A +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
+M + P++ T+ ++ + Q +A + M + PD TFNI+
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII------- 289
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID--PDAYTFSILVDGLCKEGK 344
IY +GQ +A +L + M K + PD TF+ ++ +G+
Sbjct: 290 --------------IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
++ + V M+ +G+KPN+V+YN+LM + +
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 157/370 (42%), Gaps = 25/370 (6%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ FL AV IF ++ + P+++ +L + + K ++ +S GI N
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ I Y + ++ A ++ + KK + D++TFT LI G C ++ A+ + ++
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
L + YS + +S++ V A + + G D ++Y+ +++
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQ----GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ A +L ++E ++PD + + ++ + K ++ F L M K I FT
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTG 670
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
F L+E +D + + +DP + +I GL + M+
Sbjct: 671 AVFFEIFSACNTLQEWKRAID--LIQMMDPYLPSLSI---GLTNQ-------------ML 712
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+ F G+++ +L +++ + + T++IL++ L G + VL M G++
Sbjct: 713 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
Query: 362 PNVVTYNSLM 371
P+ Y ++
Sbjct: 773 PSNQMYRDII 782
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
R A+ + + +LR PS + ++ + ++ A+ + +M +G+ ++VT +I
Sbjct: 62 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 121
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+++ Y Q A S + +PDT TF +I L Q +AL + + +
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 125 F--RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
R D V+++ + +S + ++ + +VA+G + + VSY+ L+ G
Sbjct: 182 AECRPDVVTFTSIMHLYSVK----GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ AL +L I+ + PDVV YT +++S + + A ++ M +R PNV TY
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY 302
ALI + G L EA E+ +M I P+ + L+ + K VL
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 357
Query: 303 G--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC-------- 340
G + +L++A L M K + D+ TF+IL+ G C
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 341 ---------------------------KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
K+G+V A+++ M G +P+V+ Y S++
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 374 HCLVSEVNKA 383
+ + KA
Sbjct: 478 YNASEKWGKA 487
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 176/412 (42%), Gaps = 55/412 (13%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F ++ P+I+ + ++ + TA+S+ ++ +GII ++V+ + L+N Y
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
Q A V + K+ +P+ +T+ LI N + A++ + G + + V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 131 SYSILTLKFSRR-------------------------------VISPTPVQRALQFHDDV 159
S L SR I+ +++A+ + +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 160 VAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLV 219
+ + D V+++ILI+G C+M + A+ L+++E + +Y++++ + K V
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
T+A +++++M P+V YT++++ + + +A EL EM I+PD+ + L
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 280 VDGLCKEGKVKGAKNVL--------------GVMMIYGFCIVGQLKEATELLDEMVTKNI 325
+ K G+ NV G + F L+E +D + + +
Sbjct: 510 MRAFNKGGQ---PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID--LIQMM 564
Query: 326 DPDAYTFSI-----LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
DP + SI ++ K GKV+ + ++ GV N+ TY L++
Sbjct: 565 DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D +Y LIN + GQ + A+ L+ + + P Y +I++ +A +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
+M + P++ T+ ++ + Q +A + M + PD TFNI+
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII------- 157
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID--PDAYTFSILVDGLCKEGK 344
IY +GQ +A +L + M K + PD TF+ ++ +G+
Sbjct: 158 --------------IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
++ + V M+ +G+KPN+V+YN+LM + +
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 157/370 (42%), Gaps = 25/370 (6%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ FL AV IF ++ + P+++ +L + + K ++ +S GI N
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ I Y + ++ A ++ + KK + D++TFT LI G C ++ A+ + ++
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
L + YS + +S++ V A + + G D ++Y+ +++
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQ----GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ A +L ++E ++PD + + ++ + K ++ F L M K I FT
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTG 538
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
F L+E +D + + +DP + +I GL + M+
Sbjct: 539 AVFFEIFSACNTLQEWKRAID--LIQMMDPYLPSLSI---GLTNQ-------------ML 580
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+ F G+++ +L +++ + + T++IL++ L G + VL M G++
Sbjct: 581 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
Query: 362 PNVVTYNSLM 371
P+ Y ++
Sbjct: 641 PSNQMYRDII 650
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 166/390 (42%), Gaps = 22/390 (5%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
++ ++ AV + + + + P FG +L +L K A + M N+
Sbjct: 180 ANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRY 238
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ L+ +C G++ A VL ++ + G +PD + FT L+ G ++ A +D+
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+GF + Y++L R + + A++ ++ G D V+Y+ LI+G CK
Sbjct: 299 KRGFEPNVNCYTVLIQALCR---TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G +L + K V P V Y I+ + K + + L +M + P++ Y
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
+I C +G++KEA L +EM + P TF I+++G +G + A N M+
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 302 YGFCIVGQLKEATELLDEMV------------------TKNIDPDAYTFSILVDGLCKEG 343
G Q LL+ +V T + + + ++I + L +G
Sbjct: 476 RGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKG 535
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
VK A + MM+ + P TY LM G
Sbjct: 536 HVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 168/373 (45%), Gaps = 27/373 (7%)
Query: 34 LVKMKHYPTAISLSHQMESSGIISNMVTSS---ILINCYCHLGQIPFAFSVLAKILKKGY 90
L KM+ + L +M + ++ +L+ + + A VL ++ K G
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
+PD F L+ LC N V+ A + +D + + F + ++ L + R +
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFED-MREKFPPNLRYFTSLLYGWCRE----GKLM 253
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
A + + G D V ++ L++G G+ A L+ + + +P+V YT +I
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 211 DSLCK-DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+LC+ +K + +A ++ EM ++ TYTALI GFC G + + +LD+M K +
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 270 DPDAYTF-NILVDGLCKEG-----------KVKGAKNVLGV--MMIYGFCIVGQLKEATE 315
P T+ I+V KE K +G L + ++I C +G++KEA
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV--KPNVVTYNSLMDG 373
L +EM + P TF I+++G +G + A N M+ +G+ P T SL++
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNN 493
Query: 374 HCLVSEVNKAKDI 386
++ AKD+
Sbjct: 494 LVRDDKLEMAKDV 506
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 164/358 (45%), Gaps = 20/358 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +++ L K + + T +S+ +M + G+++ M T +I + + + A + +
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K ++ T L+ L A++ + Q D + + F + ++Y++L + R
Sbjct: 256 KYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----V 310
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A + +D++ G + D V++++++ GL + + A++L ++ K P+V Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T +I CK + A + +MV + P+ YT LI GF +L ELL EM
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKE 312
K PD T+N L+ + + + + M+ + + + +
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+ DEM+ K I PD ++++L+ GL EGK + A L M+ +G+K ++ YN
Sbjct: 491 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 39/281 (13%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A I+N ++ P I+ +L L++ AI L H M+S G N+ + +I+I
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 375
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + A ++ G QPD +T LI G +L
Sbjct: 376 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-----------------KL 418
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y +L ++ +G D +Y+ LI + +
Sbjct: 419 DTV-YELLK---------------------EMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ K+ ++P + + I+ S + ++ EM+ K I P+ +YT LI G
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
G+ +EA L+EM+ K + +N + G+
Sbjct: 517 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 24/262 (9%)
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQV--------SYSILINGLCKMGQT-KPALQLL-RKI 194
+P V+R + D++ A ++ V S+ +++ L + KPA +
Sbjct: 126 NPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAA 185
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E + D Y +++ L K + ++ EM +K +L + T+T + F +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLC-----KEGKV---KGAKNVLGVMMIY---- 302
K+A + + M T N L+D L KE +V K + MM Y
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 304
Query: 303 -GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G+C V L EA + ++M+ + PD +++++GL + K A + VM +G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 362 PNVVTYNSLMDGHCLVSEVNKA 383
PNV +Y ++ C S + A
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETA 386
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 164/358 (45%), Gaps = 20/358 (5%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +++ L K + + T +S+ +M + G+++ M T +I + + + A + +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K ++ T L+ L A++ + Q D + + F + ++Y++L + R
Sbjct: 257 KYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR----V 311
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A + +D++ G + D V++++++ GL + + A++L ++ K P+V Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T +I CK + A + +MV + P+ YT LI GF +L ELL EM
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGFCIVGQLKE 312
K PD T+N L+ + + + + M+ + + + +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+ DEM+ K I PD ++++L+ GL EGK + A L M+ +G+K ++ YN
Sbjct: 492 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 39/281 (13%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A I+N ++ P I+ +L L++ AI L H M+S G N+ + +I+I
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C + A ++ G QPD +T LI G +L
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK-----------------KL 419
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V Y +L ++ +G D +Y+ LI + +
Sbjct: 420 DTV-YELLK---------------------EMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ K+ ++P + + I+ S + ++ EM+ K I P+ +YT LI G
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
G+ +EA L+EM+ K + +N + G+
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 24/262 (9%)
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQV--------SYSILINGLCKMGQT-KPALQLL-RKI 194
+P V+R + D++ A ++ V S+ +++ L + KPA +
Sbjct: 127 NPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAA 186
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
E + Y +++ L K + ++ EM +K +L + T+T + F +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLC-----KEGKV---KGAKNVLGVMMIY---- 302
K+A + + M T N L+D L KE +V K + MM Y
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 303 -GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
G+C V L EA + ++M+ + PD +++++GL + K A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 362 PNVVTYNSLMDGHCLVSEVNKA 383
PNV +Y ++ C S + A
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETA 387
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 33/379 (8%)
Query: 7 LAVFIFNRLLRTHP-TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
+++ F L + TP + + +L+ K A S ++++G
Sbjct: 95 FSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQY 151
Query: 66 INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ-VQRALQFHDDVVAQG 124
+ C G + A V + G +T +++ G CL A+ + R + H ++V
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG-CLKARKLDRFWELHKEMVESE 210
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
F +++ I R + V + + QG Q Y+ LI+G C++G
Sbjct: 211 FDSERIRCLI------RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNY 264
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
++L + P + +Y II LC +K +A+ ++ + K P+ YT +
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
I GFC G L A +L EM+ K + P+ + +N+++ G K G++
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI--------------- 369
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
L EA +EM+ + + ++ G C GK A + M + GV PN
Sbjct: 370 ----SLVEA--FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 365 VTYNSLMDGHCLVSEVNKA 383
+TYN+L+ G C ++V K
Sbjct: 424 ITYNALIKGFCKENKVEKG 442
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 151/353 (42%), Gaps = 31/353 (8%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT-SSILINCYCHLGQIPFA 78
P P+++E + + L + AI + + ++ GI S++VT +S+L+ C ++
Sbjct: 143 PEPTLLE--QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL-KARKLDRF 199
Query: 79 FSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLK 138
+ + ++++ + + I LI+ LC V + + QG Q Y+ L
Sbjct: 200 WELHKEMVESEFDSERIR--CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
F + + + L ++A Y +I GLC + A + + ++ K
Sbjct: 258 FCE-IGNYACMSEVLH---TMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKG 313
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
PD V+YTT+I C+ + A L+ EM+ K + PN F Y +I+G G++
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLD 318
+EM+ + N ++ G C GK EA E+
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS---------------------DEAFEIFK 412
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
M + P+A T++ L+ G CKE KV+ + + G+KP+ + Y +L+
Sbjct: 413 NMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ +C +G VL ++ + P + +IKGLC+N + A ++ +G
Sbjct: 254 LISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKG 313
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ D+V Y+ + F + + R L F +++ +G R ++ +Y+++I+G K G+
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSA--RKLWF--EMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
++ ++ T+I C +AF ++ M + PN TY AL
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
I GFC ++++ +L E+ + P + LV L
Sbjct: 430 IKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 93/235 (39%), Gaps = 39/235 (16%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + ++ + PS+ + KI+ L K A + ++ G + V + +I +C
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + +++KKG +P+ + +I G
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHG--------------------------- 362
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
F R IS F+++++ G+ +S + +I G C G++ A ++
Sbjct: 363 -------HFKRGEISLVEA-----FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEI 410
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
+ + V P+ + Y +I CK+ V LY E+ + + P+ Y AL+
Sbjct: 411 FKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A IF L P + + ++ + +A L +M G+ N +++I+
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIH 361
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G+I + ++L+ GY ++ T+IKG C + + A + ++ G
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
+ ++Y+ L F + V++ L+ + ++ A G + ++Y+ L+ L
Sbjct: 422 NAITYNALIKGFCKE----NKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 148/323 (45%), Gaps = 31/323 (9%)
Query: 40 YPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK---GYQPDTIT 96
Y L +M G + T ++LI C G+ A V+ + +K Y+P +
Sbjct: 168 YKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHS 224
Query: 97 FTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFH 156
+ ++ L Q + ++ ++ GF D ++Y+I+ F+ + T R +
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM--FANFRLGKT--DRLYRLL 280
Query: 157 DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD 216
D++V GF D +Y+IL++ L + AL LL + V+P V+ +TT+ID L +
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
+ E V P+V YT +I G+ G+L++A E+ EM K P+ +T+
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 277 NILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
N ++ G C + G+ KEA LL EM ++ +P+ +S LV
Sbjct: 401 NSMIRGFC---------------------MAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Query: 337 DGLCKEGKVKGAKNVLGVMMKQG 359
+ L GKV A V+ M+++G
Sbjct: 440 NNLKNAGKVLEAHEVVKDMVEKG 462
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 31/312 (9%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+L+ + G+ ++ +++K GY TF LI C A + R DVV Q
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTCGEAGLAR------DVVEQ 209
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRAL---QFHDDVVAQGFRLDQVSYSILINGLCK 180
+ +Y ++ + S V++ ++ ++ GF D ++Y+I++ +
Sbjct: 210 FIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFR 269
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+G+T +LL ++ PD+ Y ++ L A NL + M + P V
Sbjct: 270 LGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIH 329
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM 300
+T LI G G+L+ +DE V PD + + M
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV---------------------M 368
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
I G+ G+L++A E+ EM K P+ +T++ ++ G C GK K A +L M +G
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 361 KPNVVTYNSLMD 372
PN V Y++L++
Sbjct: 429 NPNFVVYSTLVN 440
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 4/246 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + IL SL+ +K Y + QM G +++T +I++ LG+ + +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L +++K G+ PD T+ L+ L + AL + + G + ++ L SR
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
++ F D+ V G D V Y+++I G G+ + A ++ +++ K P
Sbjct: 340 ----AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+V Y ++I C +A L EM S+ PN Y+ L+ G++ EA E++
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVV 455
Query: 262 DEMVTK 267
+MV K
Sbjct: 456 KDMVEK 461
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 60/192 (31%)
Query: 239 FTYTALIYG-----FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
F +TA Y F G+ K L+DEM+ A TFN+L+ C G+ A+
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLAR 204
Query: 294 NV--------------------------LGV------------MMIYGFC---------- 305
+V LGV M+ GF
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 306 ----IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+G+ LLDEMV PD YT++IL+ L K A N+L M + GV+
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 362 PNVVTYNSLMDG 373
P V+ + +L+DG
Sbjct: 325 PGVIHFTTLIDG 336
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 25/300 (8%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ G++ D T+TT++ L Q + D++V G + + V+Y+ L + R
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-- 414
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A+ + + G + D+V+Y LI+ K G A+ + ++++ + PD Y
Sbjct: 415 --LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+ II+ L K + A L+ EMV + PN+ TY ++ + A +L +M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+PD T++I VM + G C G L+EA + EM KN
Sbjct: 533 AGFEPDKVTYSI-------------------VMEVLGHC--GYLEEAEAVFTEMQQKNWI 571
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
PD + +LVD K G V+ A M+ G++PNV T NSL+ V+++ +A ++
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 171/385 (44%), Gaps = 42/385 (10%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + ++R P+ + + +++ S + + A+++ +QM+ +G + VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + ++ G PDT T++ +I L + A + ++V QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+I+ ++ Q AL+ + D+ GF D+V+YSI++ L G + A +
Sbjct: 506 TYNIMMDLHAK----ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ K PD +Y ++D K V A+ Y M+ + PNV T +L+ F
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
V ++ EA ELL M+ + P T+ +L+ C +G+ K + GFC GQL
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK---------LDMGFC--GQL 669
Query: 311 --------------------------KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
A LD M +++ + +VD L K G+
Sbjct: 670 MASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQ 729
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNS 369
+ A +V V ++ V P+ + S
Sbjct: 730 KEEAGSVWEVAAQKNVFPDALREKS 754
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 144/359 (40%), Gaps = 58/359 (16%)
Query: 22 PSIIEFGKILTSLV----KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
P G T++V + K + L +M G N VT + LI+ Y +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +V ++ + G +PD +T+ TLI D+ A+ LD
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLI-----------------DIHAKAGFLDI-------- 452
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
A+ + + A G D +YS++IN L K G A +L ++ +
Sbjct: 453 --------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
P++V Y ++D K + +A LY +M + P+ TY+ ++ G L+EA
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG-------------- 303
+ EM KN PD + +LVD K G V+ A M+ G
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
F V ++ EA ELL M+ + P T+++L+ C +G+ K G +M P
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGHP 676
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 39/373 (10%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQM--ESSGIISNMVTSSILINCYCHLGQIPFAFS 80
SI + ++ L KM+ + L +M E+ +I + +L+ + + A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV-VLVQRFASADMVKKAIE 204
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
VL ++ K G++PD F L+ LC + V+ A + +D+ + F ++ ++ L +
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWC 263
Query: 141 R--RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
R +++ V +Q ++ GF D V Y+ L++G G+ A LLR + +
Sbjct: 264 RVGKMMEAKYV--LVQMNE----AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
+P+ YT +I +LCK + +A ++ EM +V TYTAL+ GFC G++ +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 259 ELLDEMVTKNIDPDAYTF-NILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELL 317
+LD+M+ K + P T+ +I+V KE +E EL+
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKES----------------------FEECLELM 415
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY----NSLMDG 373
++M PD +++++ CK G+VK A + M + G+ P V T+ N L
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 374 HCLVSEVNKAKDI 386
CL+ + K++
Sbjct: 476 GCLLEASDHFKEM 488
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 147/310 (47%), Gaps = 21/310 (6%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
QM +G ++V + L++ Y + G++ A+ +L + ++G++P+ +T LI+ LC
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
+++ A++ ++ D V+Y+ L F + + + DD++ +G +
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCK----WGKIDKCYIVLDDMIKKGLMPSE 392
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
++Y ++ K + L+L+ K+ PD+ +Y +I CK V +A L++E
Sbjct: 393 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 452
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI-DPDAY-TFNILVDGLCKE 286
M + P V T+ +I G G L EA++ EMVT+ + Y T +L++ + K+
Sbjct: 453 MEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKD 512
Query: 287 GKVKGAKNVLGVMMIYGFCIV---------------GQLKEATELLDEMVTKNIDPDAYT 331
K++ AK+V + G C + G KEA EM+ + P T
Sbjct: 513 KKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDT 572
Query: 332 FSILVDGLCK 341
F+ L+ GL K
Sbjct: 573 FAKLMKGLKK 582
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 174/381 (45%), Gaps = 31/381 (8%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
+ ++ A+ + + + + P FG +L +L K A L M ++
Sbjct: 196 ADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYF 255
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+S+L +C +G++ A VL ++ + G++PD + +T L+ G ++ A D+
Sbjct: 256 TSLLYG-WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+GF + Y++L + + ++ A++ ++ D V+Y+ L++G CK
Sbjct: 315 RRGFEPNANCYTVLI----QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+ +L + K + P + Y I+ + K + + L +M P++ Y
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
+I C +G++KEA L +EM + P TF I+++GL +G
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG-------------- 476
Query: 302 YGFCIVGQLKEATELLDEMVTKNI-DPDAY-TFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
C++ EA++ EMVT+ + Y T +L++ + K+ K++ AK+V + +G
Sbjct: 477 ---CLL----EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Query: 360 V-KPNVVTYNSLMDGHCLVSE 379
+ NV+++ + H L S+
Sbjct: 530 ACELNVLSWTIWI--HALFSK 548
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+++ +L+ A L M G N ++LI C + ++ A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ + + D +T+T L+ G C ++ + DD++ +G +++Y + + +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 142 R-----VISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
+ + R +++H D+ Y+++I CK+G+ K A++L ++E
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGI---------YNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-------------------- 236
+ P V + +I+ L + +A + + EMV++ +
Sbjct: 456 NGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKL 515
Query: 237 ------------------NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
NV ++T I+ G KEA EM+ + P TF
Sbjct: 516 EMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAK 575
Query: 279 LVDGLCK 285
L+ GL K
Sbjct: 576 LMKGLKK 582
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 155/360 (43%), Gaps = 61/360 (16%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A FNR++ P + + ++L SL KH A + + GI+ + T SIL+
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ + A V ++L++ D + + L+ LC + V G+++
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD-----------GGYKM 265
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
Q ++ G + D S++I I+ C G A
Sbjct: 266 FQ----------------------------EMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++L +++ + P+V + II +LCK++ V DA+ L EM+ K P+ +TY +++
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
C ++ AT+LL M PD +T+N+++ L + +
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR---------------------I 396
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLC-KEGKVKGAKNVLGVMMKQGVKPNVVT 366
G+ ATE+ + M + P T+++++ GL K+GK++ A +M+ +G+ P T
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
++P V ++ SLC K V A + + I+P+ TY+ L+ G+ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGF 304
++ DEM+ +N D +N L+D LCK G V G + M I+ +
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C G + A ++LD M ++ P+ YTF+ ++ LCK KV A +L M+++G P+
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 365 VTYNSLMDGHCLVSEVNKA 383
TYNS+M HC EVN+A
Sbjct: 349 WTYNSIMAYHCDHCEVNRA 367
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 161 AQGFRL--DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
A+GF + +YSIL+ G ++ A ++ ++ + D++ Y ++D+LCK
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
V + ++ EM + + P+ +++ I+ +C G + A ++LD M ++ P+ YTFN
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 279 LVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
++ LCK KV +A LLDEM+ K +PD +T++ ++
Sbjct: 319 IIKTLCKNEKVD---------------------DAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
C +V A +L M + P+ TYN ++ + ++A +I
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 122/301 (40%), Gaps = 40/301 (13%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ +L + ++ + +L +L K + +M + G+ + + +I I+ YC
Sbjct: 230 VFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A+ VL ++ + P+ TF +IK LC N +V A D+++ +G D
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTW 349
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+ + + +H C + A +L
Sbjct: 350 TYNSI-----------------MAYH----------------------CDHCEVNRATKL 370
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
L +++ PD Y ++ L + A ++ M ++ P V TYT +I+G
Sbjct: 371 LSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Query: 251 -VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQ 309
G+L+EA + M+ + I P + T +L + L G++ + G M C V
Sbjct: 431 KKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSSCSVQD 490
Query: 310 L 310
+
Sbjct: 491 M 491
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 155/378 (41%), Gaps = 61/378 (16%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+LI Y G + + + K+ G + ++ +L K + + A ++ + +V++
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + +Y+++ F ++ AL+F +D+ +G D +++ +ING C+ +
Sbjct: 250 GVEPTRHTYNLMLWGF----FLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
A +L +++G + P VV YTT+I V D ++ EM S I PN TY+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFNILVDGLCKEGKVKGAKNVLGVMMI- 301
L+ G C G++ EA +L M+ K+I P D F L+ K G + A VL M
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 302 --------YGFCIVGQLK-----EATELLDEMVTKNI----------DPDAYT------- 331
YG I Q K A +LLD ++ K I +P AY
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Query: 332 -------------------------FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+ L+ G KEG + +L +M ++GV
Sbjct: 486 NNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNA 545
Query: 367 YNSLMDGHCLVSEVNKAK 384
Y L+ + E AK
Sbjct: 546 YELLIKSYMSKGEPGDAK 563
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 23/347 (6%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIIS-NMVTSSILINCYCHLGQIPFAFSVLAKILKK 88
+L K++H A+ E SG+I + T +I + ++ A +L + +K
Sbjct: 123 VLHGAKKLEH---ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G D F LI+ VQ +++ + G SY+ L RR
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR----GR 235
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
A ++ + +V++G + +Y++++ G + + AL+ ++ + + PD + T
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I+ C+ K + +A L+ EM +I P+V +YT +I G+ V ++ + + +EM +
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM---------------IYGFCIVGQLKEA 313
I+P+A T++ L+ GLC GK+ AKN+L MM + G + A
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
TE+L M T N+ +A + +L++ CK A +L ++++ +
Sbjct: 416 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEI 462
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
D+ +G D+ + +LI K G + ++++ +K++ V+ + Y ++ + +
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
A +++MVS+ + P TY +++GF + +L+ A ++M T+ I PD TFN
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 278 ILVDGLCKEGKVKGAK--------NVLG------VMMIYGFCIVGQLKEATELLDEMVTK 323
+++G C+ K+ A+ N +G MI G+ V ++ + + +EM +
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
I+P+A T+S L+ GLC GK+ AKN+L MM + + P
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 159/382 (41%), Gaps = 38/382 (9%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
+A FN+++ P+ + +L TA+ M++ GI + T + +I
Sbjct: 238 MAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMI 297
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
N +C ++ A + ++ P +++TT+IKG +V L+ +++ + G
Sbjct: 298 NGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIE 357
Query: 127 LDQVSYSILTLKF---SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
+ +YS L + V + ++ + H +A D + L+ K G
Sbjct: 358 PNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH---IAPK---DNSIFLKLLVSQSKAGD 411
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL-------- 235
A ++L+ + V + Y +I++ CK A L ++ K I+
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 236 --PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI-DPDAYTFNILVDGLCKEGKVKGA 292
P+ Y +I C GQ +A L +++ + + D DA N L+ G KEG +
Sbjct: 472 MEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA--LNNLIRGHAKEGNPDSS 527
Query: 293 KNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+L +M +I + G+ +A LD MV PD+ F +++
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIES 587
Query: 339 LCKEGKVKGAKNVLGVMMKQGV 360
L ++G+V+ A V+ +M+ + V
Sbjct: 588 LFEDGRVQTASRVMMIMIDKNV 609
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%), Gaps = 22/234 (9%)
Query: 149 VQRALQFHDDVVAQGF-RLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
++ ALQF G R D+ ++ +I L ++ + A +L + K V D M+
Sbjct: 130 LEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFV 189
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
+I+S K +V ++ ++ +M + + +Y +L G+ A ++MV++
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
++P +T+N+ M++GF + +L+ A ++M T+ I P
Sbjct: 250 GVEPTRHTYNL---------------------MLWGFFLSLRLETALRFFEDMKTRGISP 288
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
D TF+ +++G C+ K+ A+ + M + P+VV+Y +++ G+ V V+
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVD 342
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 25/300 (8%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ G++ D T+TT++ L Q + D++V G + + V+Y+ L + R
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-- 414
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A+ + + G + D+V+Y LI+ K G A+ + ++++ + PD Y
Sbjct: 415 --LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+ II+ L K + A L+ EMV + PN+ TY ++ + A +L +M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+PD T++I VM + G C G L+EA + EM KN
Sbjct: 533 AGFEPDKVTYSI-------------------VMEVLGHC--GYLEEAEAVFTEMQQKNWI 571
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
PD + +LVD K G V+ A M+ G++PNV T NSL+ V+++ +A ++
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 171/385 (44%), Gaps = 42/385 (10%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + ++R P+ + + +++ S + + A+++ +QM+ +G + VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + ++ G PDT T++ +I L + A + ++V QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+I+ ++ Q AL+ + D+ GF D+V+YSI++ L G + A +
Sbjct: 506 TYNIMMDLHAK----ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ K PD +Y ++D K V A+ Y M+ + PNV T +L+ F
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
V ++ EA ELL M+ + P T+ +L+ C +G+ K + GFC GQL
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK---------LDMGFC--GQL 669
Query: 311 --------------------------KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
A LD M +++ + +VD L K G+
Sbjct: 670 MASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQ 729
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNS 369
+ A +V V ++ V P+ + S
Sbjct: 730 KEEAGSVWEVAAQKNVFPDALREKS 754
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 144/359 (40%), Gaps = 58/359 (16%)
Query: 22 PSIIEFGKILTSLV----KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
P G T++V + K + L +M G N VT + LI+ Y +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +V ++ + G +PD +T+ TLI D+ A+ LD
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLI-----------------DIHAKAGFLDI-------- 452
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
A+ + + A G D +YS++IN L K G A +L ++ +
Sbjct: 453 --------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
P++V Y ++D K + +A LY +M + P+ TY+ ++ G L+EA
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG-------------- 303
+ EM KN PD + +LVD K G V+ A M+ G
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
F V ++ EA ELL M+ + P T+++L+ C +G+ K G +M P
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGHP 676
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 25/300 (8%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ G++ D T+TT++ L Q + D++V G + + V+Y+ L + R
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-- 414
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ A+ + + G + D+V+Y LI+ K G A+ + ++++ + PD Y
Sbjct: 415 --LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+ II+ L K + A L+ EMV + PN+ TY ++ + A +L +M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+PD T++I VM + G C G L+EA + EM KN
Sbjct: 533 AGFEPDKVTYSI-------------------VMEVLGHC--GYLEEAEAVFTEMQQKNWI 571
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
PD + +LVD K G V+ A M+ G++PNV T NSL+ V+++ +A ++
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 171/385 (44%), Gaps = 42/385 (10%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + ++R P+ + + +++ S + + A+++ +QM+ +G + VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + ++ G PDT T++ +I L + A + ++V QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y+I+ ++ Q AL+ + D+ GF D+V+YSI++ L G + A +
Sbjct: 506 TYNIMMDLHAK----ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ K PD +Y ++D K V A+ Y M+ + PNV T +L+ F
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
V ++ EA ELL M+ + P T+ +L+ C +G+ K + GFC GQL
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK---------LDMGFC--GQL 669
Query: 311 --------------------------KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
A LD M +++ + +VD L K G+
Sbjct: 670 MASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQ 729
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNS 369
+ A +V V ++ V P+ + S
Sbjct: 730 KEEAGSVWEVAAQKNVFPDALREKS 754
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 144/359 (40%), Gaps = 58/359 (16%)
Query: 22 PSIIEFGKILTSLV----KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
P G T++V + K + L +M G N VT + LI+ Y +
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +V ++ + G +PD +T+ TLI D+ A+ LD
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLI-----------------DIHAKAGFLDI-------- 452
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
A+ + + A G D +YS++IN L K G A +L ++ +
Sbjct: 453 --------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
P++V Y ++D K + +A LY +M + P+ TY+ ++ G L+EA
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG-------------- 303
+ EM KN PD + +LVD K G V+ A M+ G
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
F V ++ EA ELL M+ + P T+++L+ C +G+ K G +M P
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGHP 676
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 166/365 (45%), Gaps = 45/365 (12%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISN-MVTSSILINCYCHLGQIPFAFSVLAKILKK 88
+L SL++ + +A+ + ME G N V S+LI ++ A S+L K+L+
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLI-ALVKKHELRLALSILFKLLEA 191
Query: 89 G---------------YQPDTITFTTLIKGLC---LNAQVQRALQFHDDVVAQGFRLDQV 130
Y P T+ L+ GL + ++ +R F + F+ D
Sbjct: 192 SDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRV--FEKLKGMKRFKFDTW 249
Query: 131 SYSILTLKFS--RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
SY+I F + + + + ++ V F D +Y+ LI+ LC G+ K AL
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+ +++ +PD Y +I CK + DA +Y EM +P+ Y L+ G
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG 308
++ EA +L ++MV + + +T+NIL+DGL + G+ + GF +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA-----------GFTLFC 418
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
LK+ + + DA TFSI+ LC+EGK++GA ++ M +G ++VT +
Sbjct: 419 DLKKKGQFV----------DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 369 SLMDG 373
SL+ G
Sbjct: 469 SLLIG 473
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 42 TAISLSHQMES------SGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTI 95
A+SL +M+ S ++ T + LI+ C G+ A V ++ G++PD
Sbjct: 266 AALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNS 325
Query: 96 TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL---TLKFSRRVISPTPVQRA 152
T+ LI+G C + ++ A++ + ++ GF D + Y+ L TLK + V A
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK-------VTEA 378
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
Q + +V +G R +Y+ILI+GL + G+ + L ++ K D + ++ +
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
LC++ + A L EM ++ ++ T ++L+ GF G+ +L+ + N+ P+
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 273 AYTFNILVDGLCKEGKVK 290
+N V+ K + K
Sbjct: 499 VLRWNAGVEASLKRPQSK 516
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 160/383 (41%), Gaps = 48/383 (12%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAK 84
I F + L + A+ L +ME+ G ++VT S L+ + G+ + ++
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV----AQGFRLDQVSYSILTLKFS 140
I + P+ + + ++ A ++R D ++G LD I+++ S
Sbjct: 490 IREGNLVPNVLRWNAGVE-----ASLKRPQSKDKDYTPMFPSKGSFLD-----IMSMVGS 539
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR--KIEGKL 198
+ DD + +DQ+++ + Q KP L R ++E K
Sbjct: 540 ED--DGASAEEVSPMEDDPWSSSPYMDQLAH--------QRNQPKPLFGLARGQRVEAKP 589
Query: 199 VQPDVVMYTTIID---SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLK 255
DV M T + S L F +++ M + +TY +++ F G +
Sbjct: 590 DSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQ 647
Query: 256 EATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MI 301
A +LD+M D T+N+++ GL K G+ A VL + +I
Sbjct: 648 TARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLI 707
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+L EAT+L D M + I+PD +++ +++ K GK+K A L M+ G
Sbjct: 708 NALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Query: 362 PNVVTYNSLMDGHCLVSEVNKAK 384
PN VT ++++D L E+ KA+
Sbjct: 768 PNHVT-DTILD--YLGKEMEKAR 787
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 47/320 (14%)
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
L+ GY+ ++ + + +C + + G LDQ IL +I
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILL----DSLIR 139
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI----------- 194
+ AL D + G L+ Y ++ L K + + AL +L K+
Sbjct: 140 SGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDD 199
Query: 195 EGKLV----QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS-KRILPNVFTYTALIYGFC 249
G+++ P V ++ L + + ++ ++ ++ KR + ++Y I+GF
Sbjct: 200 TGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFG 259
Query: 250 IVGQLKEATELLDEMVTKN------IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
G L A L EM ++ PD T+N L I+
Sbjct: 260 CWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSL---------------------IHV 298
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
C+ G+ K+A + DE+ +PD T+ IL+ G CK ++ A + G M G P+
Sbjct: 299 LCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD 358
Query: 364 VVTYNSLMDGHCLVSEVNKA 383
+ YN L+DG +V +A
Sbjct: 359 TIVYNCLLDGTLKARKVTEA 378
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 158/392 (40%), Gaps = 44/392 (11%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I + ++ L A+ + +++ SG + T ILI C ++ A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ G+ PDTI + L+ G +V A Q + +V +G R +Y+IL R
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ D+ +G +D +++SI+ LC+ G+ + A++L+ ++E +
Sbjct: 407 N----GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV 462
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT--- 258
D+V ++++ K L + ++PNV + A + Q K+
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTP 522
Query: 259 ------ELLDEM----------VTKNIDP---DAYTFNILVD-------------GLCKE 286
LD M + + P D ++ + +D GL +
Sbjct: 523 MFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARG 582
Query: 287 GKVKGAKNVLGVMMIYGFCIV----GQLKEATELLDEMVTKNI-DPDAYTFSILVDGLCK 341
+V+ + V M+ F + G L A +L + + D +YT++ ++ K
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+G + A+ VL M + ++ TYN ++ G
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 23/339 (6%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +++S K + HQM +SG+ +N+ T LI+ GQ+ AF +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
K +PD + F LI + V RA ++ A+ +D SI L + +
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALM--KACCNA 622
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
V+RA + + + G R Y+I +N K G A + + ++ K V PD V +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+ +ID K++ +AF + + S+ I +Y++L+ C K+A EL +++ +
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+ P T N L+ LC EG QL +A E LDE+ T +
Sbjct: 743 IKLRPTISTMNALITALC-EGN--------------------QLPKAMEYLDEIKTLGLK 781
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVV 365
P+ T+S+L+ ++ + + +L GV PN++
Sbjct: 782 PNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 16/241 (6%)
Query: 159 VVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
V G D Y+ LI+ K G+ ++ ++ V+ ++ + +ID +
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM--VTKNIDPDAYTF 276
V AF Y + SK + P+ + ALI G + A ++L EM T IDPD +
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 277 NILVDGLCKEGKVKGAKNVLGVMMIYG-------FCIV-------GQLKEATELLDEMVT 322
L+ C G+V+ AK V ++ YG + I G A + +M
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKE 672
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
K++ PD FS L+D + A +L QG++ ++Y+SLM C + K
Sbjct: 673 KDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKK 732
Query: 383 A 383
A
Sbjct: 733 A 733
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 158/369 (42%), Gaps = 38/369 (10%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
F F +L+ P++ F +++ + A + ++ SG+ ++ + LI+
Sbjct: 455 AFRFTKLILN---PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISS 511
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
G++ F V ++ G + + TF LI G QV +A + + ++ + D
Sbjct: 512 CAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPD 571
Query: 129 QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD--QVSYSILINGLCKMGQTKP 186
+V ++ L + V RA ++ A+ +D +S L+ C GQ +
Sbjct: 572 RVVFNALISACGQS----GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A ++ + I ++ +YT ++S K A ++Y +M K + P+ ++ALI
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----MIY 302
+ G K +LDE F IL D K +G + LG + ++
Sbjct: 688 ---VAGHAK----MLDE-----------AFGILQDA-----KSQGIR--LGTISYSSLMG 722
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
C K+A EL +++ + + P T + L+ LC+ ++ A L + G+KP
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 363 NVVTYNSLM 371
N +TY+ LM
Sbjct: 783 NTITYSMLM 791
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 159 VVAQGFRLDQV-------SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIID 211
V + FR ++ ++++L++ + A +LR ++ + D +YTT+I
Sbjct: 451 AVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLIS 510
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
S K V F ++ +M + + N+ T+ ALI G GQ+ +A + +KN+ P
Sbjct: 511 SCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKP 570
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
D FN L+ + G V A +VL M + T IDPD +
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEM-------------------KAETHPIDPDHIS 611
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVK--PNVVT 366
L+ C G+V+ AK V ++ K G++ P V T
Sbjct: 612 IGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 5/223 (2%)
Query: 17 RTHP-TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQI 75
THP P I G ++ + A + + GI +I +N G
Sbjct: 601 ETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDW 660
Query: 76 PFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL 135
FA S+ + +K PD + F+ LI + A D +QG RL +SYS L
Sbjct: 661 DFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Query: 136 TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE 195
+ ++AL+ ++ + + R + + LI LC+ Q A++ L +I+
Sbjct: 721 MGA----CCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIK 776
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
++P+ + Y+ ++ + + +F L S+ + PN+
Sbjct: 777 TLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ-LKEA---TELLDEMVT 266
+ L +D + D +L ++ + +L Y A + C + +KEA T+L+
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI----- 462
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI--------------VGQLKE 312
++P TFN+L+ ++GA+ VL ++ G G++
Sbjct: 463 --LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA 520
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
E+ +M ++ + +TF L+DG + G+V A G++ + VKP+ V +N+L+
Sbjct: 521 MFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS 580
Query: 373 GHCLVSEVNKAKDI 386
V++A D+
Sbjct: 581 ACGQSGAVDRAFDV 594
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 142/300 (47%), Gaps = 30/300 (10%)
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
Q A+ ++ + + + TFT LI+ A+ + + G D++++S
Sbjct: 166 QFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFS 225
Query: 134 ILTLKFSRRVISPTPVQRALQFHD--DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
I+ SR+ +RA + D + F D + Y+ L+ G C+ G+ A ++
Sbjct: 226 IVISNLSRK-------RRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVF 278
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
++++ ++P+V Y+ +ID+LC+ ++ A +++++M+ PN T+ L+
Sbjct: 279 KEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKA 338
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G+ ++ ++ ++M +PD T+N L++ C++ L+
Sbjct: 339 GRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD---------------------ENLE 377
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
A ++L+ M+ K + +A TF+ + + K+ V GA + MM+ +PN VTYN LM
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+++ILI + G A+ ++E PD + ++ +I +L + + ++A + + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
R P+V YT L+ G+C G++ EA ++ EM I+P+ YT++I++D L
Sbjct: 248 -KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL------ 300
Query: 290 KGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
C GQ+ A ++ +M+ P+A TF+ L+ K G+ +
Sbjct: 301 ---------------CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL 345
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHC 375
V M K G +P+ +TYN L++ HC
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHC 371
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 148/333 (44%), Gaps = 20/333 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV FNR+ P I F ++++L + + A S ++ +++ + L+
Sbjct: 205 AVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVR 263
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+C G+I A V ++ G +P+ T++ +I LC Q+ RA D++ G
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ ++++ L R + ++ LQ ++ + G D ++Y+ LI C+ + A
Sbjct: 324 NAITFNNLM----RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+++L + K + + + TI + K + V A +YS+M+ + PN TY L+
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM------- 300
F ++ EM K ++P+ T+ +LV C G A + M+
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 301 ---IYGFCI-----VGQLKEATELLDEMVTKNI 325
+Y + GQLK+ EL+++M+ K +
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y +ID K + A++L M S+ + ++ T+T LI + G EA + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------------MIYGFCIVGQLKE 312
PD F+I++ L ++ + A++ + ++ G+C G++ E
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A ++ EM I+P+ YT+SI++D LC+ G++ A +V M+ G PN +T+N+LM
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 373 GH 374
H
Sbjct: 334 VH 335
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQ------RALQFHDDVVAQGFRLDQVSYSILTLK 138
+L K + PD+ +TTL+KG N +V A++ DD + D+V+Y+ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD---RNSHPDEVTYTTVVSA 461
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI-EGK 197
F ++ + RA Q ++ G ++++Y++L+ G CK Q A LLR++ E
Sbjct: 462 F----VNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA 517
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
++PDVV Y IID A ++EM ++ I P +YT L+ F + GQ K A
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 258 TELLDEMVTKNIDP----DAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------- 304
+ DEM+ DP D +N+LV+G C+ G ++ A+ V+ M GF
Sbjct: 578 NRVFDEMMN---DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 305 ------------------------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
C V + + ++ + + PD L D
Sbjct: 635 LANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICV 694
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
+ K A ++ M + G+ PN Y +
Sbjct: 695 RAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 28/244 (11%)
Query: 164 FRLDQVSYSILINGLCKMGQ---TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVT 220
F D Y+ L+ G K G+ T L+ +R+ + + PD V YTT++ + L+
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNIL 279
A + +EM + N TY L+ G+C Q+ A +LL EM I+PD ++NI+
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 280 VDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNI 325
+DG GA M G F + GQ K A + DEM+
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN--- 586
Query: 326 DP----DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
DP D +++LV+G C+ G ++ A+ V+ M + G PNV TY SL +G VS+
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG---VSQAR 643
Query: 382 KAKD 385
K D
Sbjct: 644 KPGD 647
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV---SKRILPNVFTYTALIYGFCIVGQ 253
K+ PD +YTT++ K+ V D + M + P+ TYT ++ F G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEA 313
+ A ++L EM + + T+N+L+ G CK+ ++ A+++L +E
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL--------------REM 513
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
TE I+PD +++I++DG GA M +G+ P ++Y +LM
Sbjct: 514 TE------DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Query: 374 HCL 376
+
Sbjct: 568 FAM 570
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++++ V A + +M G+ +N +T ++L+ YC QI A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 82 LAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
L ++ + G +PD +++ +I G L AL F +++ +G ++SY+ L F+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+S P F + + ++D +++++L+ G C++G + A +++ +++
Sbjct: 570 ---MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
P+V Y ++ + + + + DA L+ E+ +
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 18/123 (14%)
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTK 323
++ K PD+ + L+ G K G+V +L EA D+ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARML---------------EAMRRQDD---R 446
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
N PD T++ +V G + A+ VL M + GV N +TYN L+ G+C ++++A
Sbjct: 447 NSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 384 KDI 386
+D+
Sbjct: 507 EDL 509
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP--ALQLLRKIEGKLVQPDVVMYTT 208
+A + D + +G D +S++ LIN K G P A++LL + ++PD + Y T
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNT 302
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI--YGFCIVGQLKEATELLDEMVT 266
++ + +D + A ++ +M + R P+++TY A+I YG C G EA L E+
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFMELEL 360
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------CIV------GQLKE 312
K PDA T+N L+ +E + K V M GF I+ GQL
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 313 ATELLDEMVT-KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
A +L +M +PDA T+++L+D L K + A ++ M+ G+KP + TY++L+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 372 DGHCLVSEVNKAKD 385
G+ + +A+D
Sbjct: 481 CGYAKAGKREEAED 494
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 22/306 (7%)
Query: 22 PSIIEFGKILTSLVKMKHYPT--AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
P +I F ++ + +K A+ L + +SG+ + +T + L++ + A
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 80 SVLAKILKKGYQPDTITFTTLIK--GLC-LNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
V + QPD T+ +I G C L A+ +R ++ +GF D V+Y+ L
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM---ELELKGFFPDAVTYNSLL 374
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
F+R ++ + + + GF D+++Y+ +I+ K GQ ALQL + ++G
Sbjct: 375 YAFARE----RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 197 -KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLK 255
PD + YT +IDSL K +A L SEM+ I P + TY+ALI G+ G+ +
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 256 EATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM---------IYGFCI 306
EA + M+ PD +++++D L + + + A + M+ +Y I
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 307 VGQLKE 312
+G +KE
Sbjct: 551 LGLMKE 556
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 171/385 (44%), Gaps = 40/385 (10%)
Query: 8 AVFIFNRL-LRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
A+ +F L LR +P+ IL L + A+ + + E + + + + ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMM 232
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQR-------ALQFHDD 119
Y G+ A ++ + ++G PD I+F TLI NA+++ A++ D
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI-----NARLKSGGLTPNLAVELLDM 287
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC 179
V G R D ++Y+ L SR + + A++ +D+ A + D +Y+ +I+
Sbjct: 288 VRNSGLRPDAITYNTLLSACSR----DSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
+ G A +L ++E K PD V Y +++ + +++ +Y +M +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVT-KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
TY +I+ + GQL A +L +M +PDA T+ +L+D L K +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT--------- 454
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
EA L+ EM+ I P T+S L+ G K GK + A++ M++
Sbjct: 455 ------------VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKA 383
G KP+ + Y+ ++D +E KA
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/382 (17%), Positives = 163/382 (42%), Gaps = 45/382 (11%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ I+ + K K + A S+ + SG ++ T + L++ Y G A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR----- 141
+ G P + L+ LC++ +++ +++ GF++ + S ++ F+R
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 142 ---------RVISPTPVQRALQFHDDVVAQGFR----------LDQVSYSI---LINGLC 179
+ P R + +++ +G R +++ ++ + + N +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 180 KM----GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
KM K +Q+ ++I+ ++PD Y T+I C+D+ + + L +M + +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
P + TY +LI F L++A +L +E+++K + D ++ ++ G A+ +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 296 LGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
L +M ++ + G +EA ++L + ++ +S ++D +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 342 EGKVKGAKNVLGVMMKQGVKPN 363
L M K+G++P+
Sbjct: 1115 SKDYNSGIERLLEMKKEGLEPD 1136
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/343 (18%), Positives = 143/343 (41%), Gaps = 18/343 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A IFN ++R P+P++ +L +L + +++ G + + ++++
Sbjct: 806 ARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLD 865
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G I + + + GY P + +I+ LC +V+ A ++ F++
Sbjct: 866 AFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ ++ + ++ + ++ +Q + + G D+ +Y+ LI C+ + +
Sbjct: 926 ELAIWNSMLKMYT----AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L++++ + P + Y ++I + K K + A L+ E++SK + + Y ++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG---------V 298
G +A +LL M I+P T ++L+ G + A+ VL
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 299 MMIYGFCIVGQLK-----EATELLDEMVTKNIDPDAYTFSILV 336
+ Y I L+ E L EM + ++PD ++ V
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/391 (17%), Positives = 157/391 (40%), Gaps = 46/391 (11%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
+ +L V +HY A + + SG ++ ++ YC LG A V+ +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 87 KKGYQ-PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR---- 141
KG+ + +T +I+ Q+A ++ G D +++ L +++
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 142 ---RVI-------SPTPVQRALQ--FH---------------DDVVAQGFRLDQVSYSIL 174
R I P+P ++ H +++ GF++ + S ++
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI 234
++ + G ++ ++ P + +Y +I+ LCK K V DA + SEM
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 235 LPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKN 294
+ + +++ + + K+ ++ + ++PD T+N L+ C++ + +
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 295 VLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
++ M +I F L++A +L +E+++K + D + ++
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
G A+ +L +M G++P + T + LM
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 179 CKMGQTKPALQLLRKIEGK----LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI 234
CK+G + A Q++ + E K P MYT II++ K KL A ++ +
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGR 783
Query: 235 LPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV----- 289
P++ T+ +L+ + G + A + + M+ P + NIL+ LC +G++
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 290 ----------KGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
K +K+ + ++M+ F G + E ++ M P + ++++ L
Sbjct: 844 VVEELQDMGFKISKSSI-LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
CK +V+ A+ ++ M + K + +NS++ + + + K
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 25/240 (10%)
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILING-LCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
QRAL+ + + + + I G L + Q A+++ + E V V +Y
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNA 230
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE--ATELLDEMVT 266
++ + + A L M + +P++ ++ LI G L A ELLD +
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+ PDA T+N L+ ++ + GA V ++M
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVF---------------------EDMEAHRCQ 329
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
PD +T++ ++ + G A+ + + +G P+ VTYNSL+ K K++
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 172/396 (43%), Gaps = 24/396 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F + P+ + +L+ L K I + M+S+G N T + ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G F V ++ G++PD TF TLI A + + ++ GF
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+Y+ L +R+ + D+ ++GF+ + SYS+++ K G
Sbjct: 525 CVTTYNALLNALARK----GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD---AFNLYSEMVSKRILPNVFTYTAL 244
++ +I+ + P ++ T++ + K + + AF L+ + K P++ + ++
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK---PDMVIFNSM 637
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----- 299
+ F +A +L+ + + PD T+N L+D + G+ A+ +L +
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL 697
Query: 300 ---------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
+I GFC G ++EA +L EM + I P +T++ V G G ++
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
V+ M K +PN +T+ ++DG+C + ++A D
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 136/303 (44%), Gaps = 12/303 (3%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
++ + R + + +L +L + + + ++ M+S G + S+++ CY
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLI----KGLCLNAQVQRALQFHDDVVAQGFR 126
G + +I + P + TL+ K L A +RA G++
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL-AGSERAFTLFKK---HGYK 628
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D V ++ + F+R + +A + + G D V+Y+ L++ + G+
Sbjct: 629 PDMVIFNSMLSIFTRNNM----YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A ++L+ +E ++PD+V Y T+I C+ L+ +A + SEM + I P +FTY +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G+ +G E ++++ M + P+ TF ++VDG C+ GK A + + + + C
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCF 804
Query: 307 VGQ 309
Q
Sbjct: 805 DDQ 807
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 154/365 (42%), Gaps = 27/365 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKM-KHYPTAISLSHQMESSGIISNMVTSSILI 66
A+ +F R+ P+P+++ + IL KM + + + + +M S G+ + T S ++
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ G + A A++ GY+P T+T+ L++ AL ++
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D V+Y+ L + R S + A + + +G + ++Y+ +I+ K G+
Sbjct: 349 ADSVTYNELVAAYVRAGFS----KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
AL+L ++ P+ Y ++ L K + + +M S PN T+ ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G K + EM + +PD TFN L+ YG C
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA-------------------YGRC- 504
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
G +A+++ EM + T++ L++ L ++G + +NV+ M +G KP +
Sbjct: 505 -GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 367 YNSLM 371
Y SLM
Sbjct: 564 Y-SLM 567
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 165/403 (40%), Gaps = 30/403 (7%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
LR A F L P + + +L K Y A+S+ +ME + ++ VT +
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
L+ Y G A V+ + KKG P+ IT+TT+I + AL+ +
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G + +Y+ + ++ S ++ D+ + G ++ +++ ++ G
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRS----NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K ++ R+++ +PD + T+I + + DA +Y EM V TY A
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
L+ G + ++ +M +K P ++++++ K G N LG+ I
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG------NYLGIERIEN 585
Query: 304 FCIVGQLKEATELLDEMVTKNI--------------------DPDAYTFSILVDGLCKEG 343
GQ+ + LL ++ N PD F+ ++ +
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A+ +L + + G+ P++VTYNSLMD + E KA++I
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 144/326 (44%), Gaps = 24/326 (7%)
Query: 79 FSVLAKILKK----GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+SV AK+L K Y D +TT++ + ++A+ + + G V+Y++
Sbjct: 191 YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
+ F + S ++ L D++ ++G + D+ + S +++ + G + A + ++
Sbjct: 251 ILDVFGKMGRS---WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
+ +P V Y ++ K + T+A ++ EM + TY L+ + G
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG----------- 303
KEA +++ M K + P+A T+ ++D K GK A + M G
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 304 FCIVGQLKEATELLD---EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
++G+ + E++ +M + P+ T++ ++ +G K V M G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 361 KPNVVTYNSLMD--GHCLVSEVNKAK 384
+P+ T+N+L+ G C SEV+ +K
Sbjct: 488 EPDRDTFNTLISAYGRC-GSEVDASK 512
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 27/351 (7%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ-IPFAFSVLAKI 85
+ ++ L + Y A + M+ + + VT +ILI G+ + + K+
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
+KG + F L+K C + AL ++ +G R + + Y+ L +++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK---- 391
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
++ ++ +G + +Y+IL++ + Q LLR++E ++P+V
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 206 YTTIIDSLCKDKLVTD-AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
YT +I + + K ++D A + + M + P+ +YTALI+ + + G ++A +EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+ I P T+ ++D + G G+L E +L M+ +
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDT------------------GKLMEIWKL---MLREK 550
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
I T++ L+DG K+G A++V+ K G++P+V+TYN LM+ +
Sbjct: 551 IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 136/311 (43%), Gaps = 22/311 (7%)
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL--TLKFSRRVISPTPVQ 150
D + I GL + + A + ++ + D V+ +IL TL+ + R +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR-----SAK 326
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
+ + + +G + Q + L+ C G + AL + ++E K ++ + ++Y T++
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
D+ K + + L++EM K + P+ TY L+ + Q LL EM ++
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 271 PDAYTFNILVDGLCKEGKVKG-AKNVLGVM--------------MIYGFCIVGQLKEATE 315
P+ ++ L+ + K+ A + M +I+ + + G ++A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+EM + I P T++ ++D + G + +M+++ +K +TYN+L+DG
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 376 LVSEVNKAKDI 386
+A+D+
Sbjct: 567 KQGLYIEARDV 577
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 142/344 (41%), Gaps = 43/344 (12%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVL 82
+ I + ++ + K H L +M G+ + T +IL++ Y Q ++L
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-RLDQV-------SYSI 134
++ G +P+ ++T LI ++ D+ A F R+ +V SY+
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMS-------DMAADAFLRMKKVGLKPSSHSYTA 490
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
L +S ++A +++ +G + +Y+ +++ + G T +++ + +
Sbjct: 491 LIHAYSVSGWH----EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
+ ++ + Y T++D K L +A ++ SE + P+V TY L+ + GQ
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEAT 314
+ +LL EM N+ PD+ T++ MIY F V K A
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYST---------------------MIYAFVRVRDFKRAF 645
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN---VLGVM 355
MV PD ++ L L + K K K+ +LG++
Sbjct: 646 FYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGII 689
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
L S + K +V Y A I G + +A E+ + M N+ PD T IL+ L
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 285 KEGK----------------VKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
K G+ VK +++V G ++ FC G +EA + EM K I +
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGG-LVKSFCDEGLKEEALVIQTEMEKKGIRSN 378
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
++ L+D K ++ + + M +G+KP+ TYN LMD +
Sbjct: 379 TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 188/403 (46%), Gaps = 51/403 (12%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSI-IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
SS+ R++ F+ R R P S ++ + L M+ + +L E++ ++ ++
Sbjct: 5 SSWHRMSNFM--RKYRKIPHSSFKTKWNENLKQKYAMEELRS--NLLTDSENASVMRTLL 60
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQ-FHDD 119
+S L NC P A+ + K L K Q + I+ +++ L ++ + F D
Sbjct: 61 SSFQLHNC----EPTPQAYRFVIKTLAKSSQLENIS--SVLYHLEVSEKFDTPESIFRDV 114
Query: 120 VVAQGF--RLDQVSYSILTLKFSRRVISPTPV----------QRALQFHDDVVAQ----G 163
+ A GF R+++ + R V S + +++L+ +++ + G
Sbjct: 115 IAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMG 174
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK--DKLVTD 221
RL++ ++ ILI+ LC++G+ A +L+R + V D +Y+ ++ S+CK D D
Sbjct: 175 VRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFD 234
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
++ R P + YT ++ G+ KE +L++M ++PD + I++
Sbjct: 235 VIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQ 294
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
G+ + +A +L DE++ + PD YT+++ ++GLCK
Sbjct: 295 GVIADE---------------------DYPKADKLFDELLLLGLAPDVYTYNVYINGLCK 333
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ ++GA ++ M K G +PNVVTYN L+ ++++AK
Sbjct: 334 QNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 16/287 (5%)
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+L K + G + + TF LI LC +V A + + +D YS L
Sbjct: 166 ILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVC 225
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ + + + +D+ F Y++++ L + G+ K + +L +++ V+
Sbjct: 226 KH--KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVE 283
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+V YT ++ + D+ A L+ E++ + P+V+TY I G C ++ A ++
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCI 306
+ M +P+ T+NIL+ L K G + AK + M MI +
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
V ++ A LL+E N+ + ++ LC++G + A +L
Sbjct: 404 VDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLA 450
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
V + N++ P ++ + +L ++ + YP A L ++ G+ ++ T ++ IN
Sbjct: 271 VSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYING 330
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
C I A +++ + K G +P+ +T+ LIK L + RA ++ G +
Sbjct: 331 LCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRN 390
Query: 129 QVSYSILT---LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
++ I+ ++ V + ++ A F+ +V + R+++V I+ LC+ G
Sbjct: 391 SHTFDIMISAYIEVDEVVCAHGLLEEA--FNMNVFVKSSRIEEV-----ISRLCEKGLMD 443
Query: 186 PALQLL 191
A++LL
Sbjct: 444 QAVELL 449
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 34/285 (11%)
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFH------DDVVAQGFRLDQVSYSILING 177
GF+ D +Y+ + R A QF D++V G + + V+Y+ LI+
Sbjct: 354 GFKHDGHTYTTMVGNLGR----------AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS 403
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
+ K A+ + +++ +PD V Y T+ID K + A ++Y M + P+
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
FTY+ +I G L A L EMV + P+ TFNI++ K + A +
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 298 ----------------VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
VM + G C G L+EA + EM KN PD + +LVD K
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGK 581
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G V A M++ G++PNV T NSL+ V +++A ++
Sbjct: 582 AGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 18/373 (4%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + ++R P+ + + +++ S + + A+++ +QM+ +G + VT LI+ +
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
G + A + ++ + G PDT T++ +I L + A + ++V QG + V
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+++I+ ++ T AL+ + D+ GF+ D+V+YSI++ L G + A +
Sbjct: 501 TFNIMIALHAKARNYET----ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+++ K PD +Y ++D K V A+ Y M+ + PNV T +L+ F
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVD-----------GLCKE-GKVKGAKNVLGV 298
V ++ EA LL M+ + P T+ +L+ G C + V G + +
Sbjct: 617 VHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFL 676
Query: 299 MMIYGFCIVGQ--LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
+ + GQ + LD M +++ + +VD L K G + A +V V
Sbjct: 677 LKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAA 736
Query: 357 KQGVKPNVVTYNS 369
+ V P+ + S
Sbjct: 737 GKNVYPDALREKS 749
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ G++ D T+TT++ L Q + D++V G + + V+Y+ L + R
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY-- 409
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
++ A+ + + G D+V+Y LI+ K G A+ + ++++ + PD Y
Sbjct: 410 --LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+ II+ L K + A L+ EMV + PN+ T+ +I + A +L +M
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM---------IYGFCI-----VGQLKE 312
PD T++I+++ L G ++ A+ V M +YG + G + +
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
A + M+ + P+ T + L+ + ++ A N+L M+ G+ P++ TY L+
Sbjct: 588 AWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 133/335 (39%), Gaps = 61/335 (18%)
Query: 22 PSIIEFGKILTSLV----KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
P G T++V + K + L +M G N VT + LI+ Y +
Sbjct: 353 PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
A +V ++ + G +PD +T+ TLI D+ A+ LD
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLI-----------------DIHAKAGFLDI-------- 447
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
A+ + + G D +YS++IN L K G A +L ++ G+
Sbjct: 448 --------------AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL--IYGFCIVGQLK 255
P++V + +I K + A LY +M + P+ TY+ + + G C G L+
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLE 551
Query: 256 EATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG------------ 303
EA + EM KN PD + +LVD K G V A M+ G
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Query: 304 --FCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
F V ++ EA LL M+ + P T+++L+
Sbjct: 612 STFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
V R L +V G DQV+ I + LC+ G+ A L++++ K PD Y
Sbjct: 143 VHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
++ LCK K + + EM + P++ ++T LI C L+EA L+ ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
PD + +N + + GFC + + EA + +M + ++P
Sbjct: 260 GFKPDCFLYNTI---------------------MKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
D T++ L+ GL K G+V+ A+ L M+ G +P+ TY SLM+G C
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 46/285 (16%)
Query: 9 VFIFNRLLRTHPT--PSIIEFGKILTSLVKMKHYPTAISLSHQ----MESSGIISNMVTS 62
V +F +L++ P P F +L+ + ++IS H+ M ++G+ + VT+
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPD--SSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
I + C G++ A ++ ++ +K PDT T+ L+K LC + +F D
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD---- 218
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ DD + D VS++ILI+ +C
Sbjct: 219 -------------------------------EMRDDF---DVKPDLVSFTILIDNVCNSK 244
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
+ A+ L+ K+ +PD +Y TI+ C ++A +Y +M + + P+ TY
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
LI+G G+++EA L MV +PD T+ L++G+C++G
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 34/263 (12%)
Query: 87 KKGYQPDTITFTTLIKGLCLN-----AQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ ++P TF L+ C + V R L +V G DQV+ I R
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAV----R 167
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL-VQ 200
+ V A ++ + D +Y+ L+ LCK + + ++ V+
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD+V +T +ID++C K + +A L S++ + P+ F Y ++ GFC + + EA +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
+M + ++PD T+N L+ GL K G+V+ A+ L M+ G+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY---------------- 331
Query: 321 VTKNIDPDAYTFSILVDGLCKEG 343
+PD T++ L++G+C++G
Sbjct: 332 -----EPDTATYTSLMNGMCRKG 349
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPA--LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVT 220
FR + ++ IL++ C+ + + ++L + ++PD V + SLC+ V
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNIL 279
+A +L E+ K P+ +TY L+ C L E +DEM ++ PD +F IL
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 280 VDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+D +C +KN L+EA L+ ++ PD + ++ ++ G
Sbjct: 237 IDNVC------NSKN---------------LREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
C K A V M ++GV+P+ +TYN+L+ G V +A+
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S LR A+++ ++L P + I+ + A+ + +M+ G+ + +T
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC 105
+ LI G++ A L ++ GY+PDT T+T+L+ G+C
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/420 (19%), Positives = 172/420 (40%), Gaps = 87/420 (20%)
Query: 10 FIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
+++ ++ + P + + +I+ +LVK ++ A+++ + G++ T IL+
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C G+I +L ++ + +PD +T +IK L + +L+ D++ R D+
Sbjct: 274 CKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM-----RRDE 328
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
+ + D ++Y L+ GLCK G+ + +
Sbjct: 329 I----------------------------------KPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
L +++GK + D +Y +I+ D V A NL+ ++V + ++ Y A+I G C
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------------- 296
V Q+ +A +L + + ++PD T + ++ ++ NVL
Sbjct: 415 SVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDY 474
Query: 297 ------------------------------GVMMIYGFCI-----VGQLKEATELLDEMV 321
G + +Y + +G ++++ L EM
Sbjct: 475 LTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMR 534
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+PD+ ++SI + ++G VK A + +++ P++ Y SL G C + E++
Sbjct: 535 KLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEID 594
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 29/299 (9%)
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS--RRVI 144
+KGY+ D + L N + A Q + + +QG + + IL + RR +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
R ++ + GF+ Y+ +++ L K G AL + + + +
Sbjct: 211 ------RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST 264
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+ ++ LCK + + + M P+VF YTA+I G L + + DEM
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
I PD + LV GLCK+G+V + EL EM K
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRV---------------------ERGYELFMEMKGKQ 363
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
I D + +L++G +GKV+ A N+ ++ G ++ YN+++ G C V++V+KA
Sbjct: 364 ILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 164/401 (40%), Gaps = 56/401 (13%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L ++ +++ + R P ++ +G ++ L K L +M+ I+ + +
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI + G++ A ++ ++ GY D + +IKGLC QV +A + + +
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 125 FRLDQVSYSILTLKF---SRRVISPTPVQRALQFH---DDVVAQGFRL------------ 166
D + S + + + +R ++R + D + Q F+L
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 167 -----------DQVS-YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
VS Y+IL+ L KMG + +L L ++ +PD Y+ I
Sbjct: 494 DVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFV 553
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID--PD 272
+ V A + + +++ +P++ Y +L G C +G++ +A LL N++ P
Sbjct: 554 EKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI-DAVMLLVRECLGNVESGPM 612
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
+ + + V +CK N VM + +DEM + + + +
Sbjct: 613 EFKYALTVCHVCK------GSNAEKVMKV---------------VDEMNQEGVFINEVIY 651
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGV--KPNVVTYNSLM 371
++ G+ K G +K A+ V + K+ V + ++V Y ++
Sbjct: 652 CAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 32/256 (12%)
Query: 142 RVISPTPVQRALQFHDDVVA-----------QGFRLDQVSYSILINGLCKMGQTKPALQL 190
R ++P+ V L+ +D +G++ D +Y+ L + G + A QL
Sbjct: 121 RRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++ + P + +I ++ + +Y +M P VF Y ++
Sbjct: 181 PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVK 240
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
G A + ++ + ++ TF ILV GLCK G+++
Sbjct: 241 NGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE-------------------- 280
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
E E+L M PD + ++ ++ L EG + + V M + +KP+V+ Y +L
Sbjct: 281 -EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 371 MDGHCLVSEVNKAKDI 386
+ G C V + ++
Sbjct: 340 VVGLCKDGRVERGYEL 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
+L+T S+ + ++ +L KM ++SL ++M G + + SI I C+ G
Sbjct: 498 ILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ A S KI++ P + +L KGLC ++ + + L V
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVREC------LGNVESGP 611
Query: 135 LTLKFSR---RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
+ K++ V + ++ ++ D++ +G +++V Y +I+G+ K G K A ++
Sbjct: 612 MEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVF 671
Query: 192 RKIEGK--LVQPDVVMYTTIIDSLCKDK---LVTDA---FNLYSEMVSK--RILPN 237
+++ + + + D+V+Y ++ K K LV F L S++ +K R+L N
Sbjct: 672 TELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLRAKGCRLLDN 727
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 164/382 (42%), Gaps = 25/382 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + + S+ + ++ + + Y T++ L +M++ I +++T + +IN C
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-C 221
Query: 71 HLGQIPFA--FSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
G + + + A++ +G QPD +T+ TL+ + A + G D
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 129 QVSYSILTLKFS--RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+YS L F RR +++ ++ + G D SY++L+ K G K
Sbjct: 282 LTTYSHLVETFGKLRR------LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A+ + +++ P+ Y+ +++ + D L+ EM S P+ TY LI
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
F G KE L +MV +NI+PD T+ ++ K G + A+ +L M
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
+I F +EA + M +P TF L+ + G VK ++ +L
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 353 GVMMKQGVKPNVVTYNSLMDGH 374
++ G+ N T+N+ ++ +
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAY 537
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 19/296 (6%)
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
+P+ +T +I L + + L+ D++ +QG SY+ L + R T
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYET--- 194
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMG-QTKPALQLLRKIEGKLVQPDVVMYTTI 209
+L+ D + + ++Y+ +IN + G + L L ++ + +QPD+V Y T+
Sbjct: 195 -SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 253
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+ + L +A ++ M I+P++ TY+ L+ F + +L++ +LL EM +
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATE 315
PD ++N+L++ K G +K A V M G F G+ + +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
L EM + N DPDA T++IL++ + G K + M+++ ++P++ TY ++
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLV-QPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
++++ G + +L+L + ++ ++ +P+ +YT +I L ++ L+ ++ EM
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG-K 288
S+ + +VF+YTALI + G+ + + ELLD M + I P T+N +++ + G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 289 VKGAKNVLGVMMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
+G + M G I G EA + M I PD T+S
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
LV+ K +++ ++LG M G P++ +YN L++ + + +A
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 134/322 (41%), Gaps = 22/322 (6%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ + K++ L +M S G + ++ + ++L+ Y G I A V
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ G P+ T++ L+ + + Q ++ + D +Y+IL F
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
V FHD +V + D +Y +I K G + A ++L+ + + P
Sbjct: 400 GGYFKEVVT---LFHD-MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
YT +I++ + L +A ++ M P++ T+ +L+Y F G +KE+ +L
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGA----------------KNVLGVMMIYGFC 305
+V I + TFN ++ + GK + A + + V+ +Y F
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 306 IVGQLKEATELLDEMVTKNIDP 327
+ + E E +EM +I P
Sbjct: 576 RL--VDECREQFEEMKASDILP 595
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 29/356 (8%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+M GI+ VT + +I+ Y + GQ+ S++ K +K PDT T+ LI N
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNN 381
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
++RA + ++ G + D VSY L FS R + + DD V +D+
Sbjct: 382 DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV----EIDE 437
Query: 169 VSYSILINGLCKMGQTKPALQLLRK--IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
+ S L + + + ++ + G + Y+ ID+ + +++A ++
Sbjct: 438 YTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG---YSANIDAYGERGYLSEAERVF 494
Query: 227 --SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD--- 281
+ V+KR V Y +I + I ++A EL + M++ + PD T+N LV
Sbjct: 495 ICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 282 -------GLCKEGKVKGAKNVLGVM----MIYGFCIVGQLKEATELLDEMVTKNIDPDAY 330
G C K++ V + +I F +GQL A E+ EMV NI+PD
Sbjct: 552 SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV 611
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ +L++ G V+ A + + M + G+ N V YNSL+ + V +++A+ I
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 152/362 (41%), Gaps = 34/362 (9%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVL 82
++IE+ ++ + K A L M S G+ + T + L+ L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRR 142
K+ + GY D I + +I Q+ A + + ++V D V Y +L F+
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA-- 621
Query: 143 VISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE---GKLV 199
VQ+A+ + + + G + V Y+ LI K+G A + RK+ K
Sbjct: 622 --DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
PDV +I+ + +V A ++ M +R N FT+ ++ + G+ +EAT+
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEEATQ 738
Query: 260 LLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDE 319
+ +M I D ++N +VLG+ F + G+ KEA E E
Sbjct: 739 IAKQMREMKILTDPLSYN----------------SVLGL-----FALDGRFKEAVETFKE 777
Query: 320 MVTKNIDPDAYTFSILVDGLCKEGKVKGA----KNVLGVMMKQGVKPNVVTYNSLMD-GH 374
MV+ I PD TF L L K G K A + + +K+G++ + T +SL+ G
Sbjct: 778 MVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
Query: 375 CL 376
C+
Sbjct: 838 CV 839
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 160/418 (38%), Gaps = 60/418 (14%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVL 82
++I + +L L K + SL +M GI T LI+ Y G A L
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 83 AKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD------QVSYSILT 136
K+ K G QPD +T +++ + Q+A +F + D +Y+ +
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
+ + ++ A + ++ +G V+++ +I+ GQ L++ +
Sbjct: 306 DTYGK----SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-- 359
Query: 197 KL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLK 255
KL PD Y +I K+ + A + EM + P+ +Y L+Y F I ++
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 256 EATELLDEMVTKNIDPDAYTFNIL----------------------------------VD 281
EA L+ EM N++ D YT + L +D
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 282 GLCKEGKVKGAKNVLGV-------------MMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
+ G + A+ V +MI + I ++A EL + M++ + PD
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD 539
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
T++ LV L + L M + G + + Y +++ + ++N A+++
Sbjct: 540 KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 22/258 (8%)
Query: 150 QRALQFHDDVVAQG-FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+RA++ + ++G + L+ + Y+I++ L K + + L ++ K ++P Y T
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+ID K L A +M + P+ T ++ + + ++A E +
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 269 IDPD------AYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVG 308
D +YT+N ++D K G++K A M MI+ + G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
QL E T L+ M + PD T++IL+ K ++ A M G+KP+ V+Y
Sbjct: 348 QLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 369 SLMDGHCLVSEVNKAKDI 386
+L+ + V +A+ +
Sbjct: 407 TLLYAFSIRHMVEEAEGL 424
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 116/277 (41%), Gaps = 48/277 (17%)
Query: 1 MSSFLRL-----AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGI 55
+SSF++L A ++ ++ + P ++ +G ++ + + A+S M+ +GI
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 56 ISNMVTSSILINCYCHLGQIPFAFSVLAKILK---KGYQPDTITFTTLIKGLCLNAQVQR 112
N V + LI Y +G + A ++ K+L+ K PD T +I N +R
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI-----NLYSER 696
Query: 113 ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
++ V++A D + +G ++ +++
Sbjct: 697 SM----------------------------------VRKAEAIFDSMKQRG-EANEFTFA 721
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+++ K G+ + A Q+ +++ + D + Y +++ D +A + EMVS
Sbjct: 722 MMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS 781
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
I P+ T+ +L +G K+A ++E+ K I
Sbjct: 782 GIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 79/128 (61%)
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
++Y+ +I+G CK + A ++L + K PDVV ++T+I+ CK K V + ++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M + I+ N TYT LI+GFC VG L A +LL+EM++ + PD TF+ ++ GLC + +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 289 VKGAKNVL 296
++ A +L
Sbjct: 131 LRKAFAIL 138
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M+ I P TY ++I GFC ++ +A +LD M +K PD TF+ L++G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
V + M +I+GFC VG L A +LL+EM++ + PD TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 335 LVDGLCKEGKVKGAKNVLGVMMK 357
++ GLC + +++ A +L + K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTK 323
M+ +I P T+N ++DG CK+ +V AK +LD M +K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAK---------------------RMLDSMASK 39
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
PD TFS L++G CK +V + M ++G+ N VTY +L+ G C V +++ A
Sbjct: 40 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 99
Query: 384 KDI 386
+D+
Sbjct: 100 QDL 102
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P ++ F ++ K K + + +M GI++N VT + LI+ +C +G + A
Sbjct: 42 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 101
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
+L +++ G PD ITF ++ GLC ++++A +D+
Sbjct: 102 LLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
+L+ P TIT+ ++I G C +V A + D + ++G
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-------------------C 41
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
SP D V++S LING CK + +++ ++ + + + V
Sbjct: 42 SP--------------------DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 81
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
YTT+I C+ + A +L +EM+S + P+ T+ ++ G C +L++A +L+++
Sbjct: 82 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
+LR P+ I + ++ K A + M S G ++VT S LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ + ++ ++G +T+T+TTLI G C + A +++++ G D +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 135 L 135
+
Sbjct: 121 M 121
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 39/175 (22%)
Query: 55 IISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL 114
I +T + +I+ +C ++ A +L + KG PD +TF+TLI G C +V +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSIL 174
+ + + RR G + V+Y+ L
Sbjct: 66 E-------------------IFCEMHRR--------------------GIVANTVTYTTL 86
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
I+G C++G A LL ++ V PD + + ++ LC K + AF + ++
Sbjct: 87 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 170/383 (44%), Gaps = 42/383 (10%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS---ILINCYCHLGQIPF 77
+PS+ F ++ SL K + + A SL S SN+V++ +LI Y G +
Sbjct: 134 SPSL--FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQ 191
Query: 78 AFSVLAKILKKGYQPDTITFTTL------IKGLCLNAQVQRALQFHDDVVAQGFRLD--- 128
A + Y+P + T L + LC V+ A + + + G +D
Sbjct: 192 AIRAFE--FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERI---GGTMDSNW 246
Query: 129 ----QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
++ +L F R + ++A + +++ A + V+Y LI G C+M +
Sbjct: 247 VPSVRIFNILLNGWFRSRKL-----KQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ A+++L +++ ++ + +++ IID L + +++A + P + TY +L
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL 361
Query: 245 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG- 303
+ FC G L A+++L M+T+ +DP T+N K K + N+ ++ G
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 304 -------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
C G+L A ++ EM + IDPD T ++L+ LC+ ++ A
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Query: 351 VLGVMMKQGVKPNVVTYNSLMDG 373
+++G+ P +T+ + +G
Sbjct: 482 EFDNAVRRGIIPQYITFKMIDNG 504
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 38/329 (11%)
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS---YSILTLKFSRR 142
+K G+ F +++ LC + + A D V + VS + +L +++R
Sbjct: 127 MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARA 186
Query: 143 VISPTPVQRALQF---HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
+ + RA +F ++ V L + +L++ LCK G + A L +I G +
Sbjct: 187 GMVQQAI-RAFEFARSYEPVCKSATELRLLE--VLLDALCKEGHVREASMYLERIGGTMD 243
Query: 200 Q---PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
P V ++ +++ + + + A L+ EM + + P V TY LI G+C + +++
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQI 303
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------------- 299
A E+L+EM ++ + FN ++DGL + G++ A LG+M
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA---LGMMERFFVCESGPTIVTYNS 360
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
++ FC G L A+++L M+T+ +DP T++ K K + N+ +++ G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 360 VKPNVVTYNSLMDGHC------LVSEVNK 382
P+ +TY+ ++ C L +VNK
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 4/278 (1%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS+ F +L + + A L +M++ + +VT LI YC + ++ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++ + + + F +I GL ++ AL + V+Y+ L F +
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
P A + ++ +G +Y+ K +T+ + L K+ P
Sbjct: 368 AGDLPG----ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D + Y I+ LC+D ++ A + EM ++ I P++ T T LI+ C + L+EA E
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEF 483
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
D V + I P TF ++ +GL +G AK + +M
Sbjct: 484 DNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 139 FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL----RKI 194
F R SP + ++ + + GF L + ++N LCK + + A L+ R
Sbjct: 108 FDRLSSSPMLLHSVFKWAE--MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSD 165
Query: 195 EG-KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS-----EMVSKRILPNVFTYTALIYGF 248
EG LV D + +I + +V A + E V K + L+
Sbjct: 166 EGSNLVSADT--FIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSAT-ELRLLEVLLDAL 222
Query: 249 CIVGQLKEATELLDEM---VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
C G ++EA+ L+ + + N P FNIL++G + K+K A+ + M
Sbjct: 223 CKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVK 282
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+I G+C + +++ A E+L+EM ++ + F+ ++DGL + G++ A
Sbjct: 283 PTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA--- 339
Query: 352 LGVMMKQGV---KPNVVTYNSLMDGHCLVSEVNKAKDI 386
LG+M + V P +VTYNSL+ C ++ A I
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ + R P+I+ + ++ + K P A + M + G+ T +
Sbjct: 339 ALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFK 398
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ + ++ K+++ G+ PD +T+ ++K LC + ++ A+Q + ++ +G
Sbjct: 399 YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D ++ ++L R + ++ A + D+ V +G +++ ++ NGL G + A
Sbjct: 459 DLLTTTMLIHLLCRLEM----LEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Query: 188 LQL 190
+L
Sbjct: 515 KRL 517
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 59 MVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD 118
+VT + L+ +C G +P A +L ++ +G P T T+ K + + + + +
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 119 DVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
++ G D+++Y ++ + + + A+Q + ++ +G D ++ ++LI+ L
Sbjct: 415 KLIEAGHSPDRLTYHLIL----KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS----KRI 234
C++ + A + + + P + + +ID+ + K ++D S ++S +
Sbjct: 471 CRLEMLEEAFEEFDNAVRRGIIPQYITF-KMIDNGLRSKGMSDMAKRLSSLMSSLPHSKK 529
Query: 235 LPNVF 239
LPN +
Sbjct: 530 LPNTY 534
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 145/289 (50%), Gaps = 7/289 (2%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +FN++++ +P+++ + ++ V + A ++ +++S G+ ++V +++I+
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y LG+ A V + K+ PD TF +++ LCL+ + + + G
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDF 382
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D V+ ++L+ FS+ + AL+ + + F LD +Y++ ++ LC+ G + A
Sbjct: 383 DLVTGNLLSNCFSKIGYNSY----ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+++ + I + D ++ IIDSL + A +L+ + ++ +V +YT I G
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
+++EA L +M I P+ T+ ++ GLCKE + + + +L
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKIL 547
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 150/352 (42%), Gaps = 50/352 (14%)
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
VL +++ +G+ P+ F +++ C V A Q ++ G + +S+L F
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R S P Q+A+ + ++ G + V+Y+ LI G +G A +L K++ + +
Sbjct: 259 R---SGEP-QKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL------ 254
PD+V+ +I + + +A +++ + ++++P+ +T+ +++ C+ G+
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI 374
Query: 255 --------------------------KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
A ++L M K+ D YT+ + + LC+ G
Sbjct: 375 THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 289 VKGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
+ A + +++ I +G+ A L + + D ++++
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ GL + +++ A ++ M + G+ PN TY +++ G C E K + I
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
KI G ++P V + +++ + + A +Y+ M S +PN ++ +
Sbjct: 100 KISGCEIKPRVFL--LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLN 157
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG---KVKGAKNVLGVMMIYGF----- 304
+ A E+ + + +N ++F+I + C G + G K VL M+ GF
Sbjct: 158 VVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRE 213
Query: 305 ---------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
C G + EA +++ M+ I +S+LV G + G+ + A ++ M
Sbjct: 214 RFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 356 MKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++ G PN+VTY SL+ G + V++A
Sbjct: 274 IQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 25/309 (8%)
Query: 51 ESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ- 109
ES+ I N+ + +++C G++ + ++ + G +PD +T+ TL+ G C+ +
Sbjct: 160 ESTKI--NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKN 216
Query: 110 -VQRALQFHDDVVAQGFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD 167
+A++ ++ G ++D V Y ++L + S + A F + +G +
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAI-----CASNGRSEEAENFIQQMKVEGHSPN 271
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
YS L+N G K A +L+ +++ + P+ VM TT++ K L + L S
Sbjct: 272 IYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLS 331
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
E+ S N Y L+ G G+L+EA + D+M K + D Y +I++ LC+
Sbjct: 332 ELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSK 391
Query: 288 KVKGAKN--------------VLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFS 333
+ K AK V+ M+ +C G+++ ++ +M + + PD TF
Sbjct: 392 RFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFH 451
Query: 334 ILVDGLCKE 342
IL+ KE
Sbjct: 452 ILIKYFIKE 460
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP-ALQLLRKIEGKLVQPDVVMYTTIID 211
++ D + G + D V+Y+ L+ G K+ P A++L+ ++ +Q D VMY T++
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLA 245
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
+ +A N +M + PN++ Y++L+ + G K+A EL+ EM + + P
Sbjct: 246 ICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP 305
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLG--------------VMMIYGFCIVGQLKEATELL 317
+ L+ K G ++ +L M++ G G+L+EA +
Sbjct: 306 NKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIF 365
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
D+M K + D Y SI++ LC+ + K AK + K ++V N+++ +C
Sbjct: 366 DDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRA 425
Query: 378 SEV 380
E+
Sbjct: 426 GEM 428
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 146/362 (40%), Gaps = 54/362 (14%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKH-YPTAISLS---------------------- 47
+F+++ R P ++ + +L +K+K+ YP AI L
Sbjct: 188 LFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAIC 247
Query: 48 -------------HQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDT 94
QM+ G N+ S L+N Y G A ++ ++ G P+
Sbjct: 248 ASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNK 307
Query: 95 ITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ 154
+ TTL+K R+ + ++ + G+ +++ Y +L S+ ++ A
Sbjct: 308 VMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSK----AGKLEEARS 363
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
DD+ +G R D + SI+I+ LC+ + K A +L R E + D+VM T++ + C
Sbjct: 364 IFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYC 423
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+ + + +M + + P+ T+ LI F +KE LL T ++ +
Sbjct: 424 RAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF-----IKEKLHLLAYQTTLDMHSKGH 478
Query: 275 TFNILVDGLCKE-----GKVKGAKNVLGVMMIYGFCIVGQLKEATE-LLDEMVTKNIDPD 328
L + LC GK++ V + + KE E +L ++ N+ D
Sbjct: 479 R---LEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKD 535
Query: 329 AY 330
AY
Sbjct: 536 AY 537
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 31/268 (11%)
Query: 121 VAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK 180
VA+ R + S S L R + + VQR+ F + L ++++
Sbjct: 56 VAEAPRSKRHSNSYLA-----RKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGI 110
Query: 181 MGQTKPALQLLRKIE--GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
G+ + +QL ++ GK+ V Y++ I K V+ A +Y + + NV
Sbjct: 111 SGRWQDLIQLFEWMQQHGKI---SVSTYSSCI-KFVGAKNVSKALEIYQSIPDESTKINV 166
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
+ +++ G+L +L D+M + PD T+N L+ G K KN
Sbjct: 167 YICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK------VKN---- 216
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
G+ +A EL+ E+ I D+ + ++ G+ + A+N + M +
Sbjct: 217 ----GY------PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 359 GVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G PN+ Y+SL++ + + KA ++
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADEL 294
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 170/404 (42%), Gaps = 41/404 (10%)
Query: 1 MSSFLR-----LAVF-------IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSH 48
MSS LR LAV+ + R +I + +L + + + A+ L
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+ME GI +VT +ILI Y LG+ A ++ K+ G D T+T +I GL N
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
+AL D+ + F V ++ + + + + H V GF D
Sbjct: 332 MRYQAL----DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
+ + L++ K G+ + A ++ ++ K DV + ++I C+ A+ L++
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN-IDPDAYTFNILVDGLCKEG 287
M + PN+ T+ +I G+ G EA +L M + + T+N+++ G + G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 288 KVKGAKNVLGVMMIYGF-----CIVGQLKEATELLDE---------MVTKNIDPDAYTFS 333
K A + M F I+ L LL ++ +N+D +
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 334 ILVDGLCKEGKVKGAKNV-LGVMMKQGVKPNVVTYNSLMDGHCL 376
L D K G ++ ++ + LG+ K +++T+NSL+ G+ L
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETK-----DIITWNSLIGGYVL 602
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 152/355 (42%), Gaps = 38/355 (10%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N+ T S +I Y + + ++K G PD F +++G V+ H
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 118 DDVVAQGFR-LDQVSYSILTL-----------KFSRR-----VISPTPV----------Q 150
V+ G +VS SIL + KF RR VI+ V +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
A++ ++ +G V+++ILI G ++G+ A+ L++K+E + DV +T +I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
L + + A +++ +M ++PN T + + + + + +E+ V
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEM 320
D N LVD K GK++ A+ V + MI G+C G +A EL M
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG-VKPNVVTYNSLMDGH 374
N+ P+ T++ ++ G K G A ++ M K G V+ N T+N ++ G+
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 166/393 (42%), Gaps = 25/393 (6%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV + + + +P ++ + ++ ++ A+ L +ME+ GI +++ T + +I+
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
H G A + K+ G P+ +T + + + + + H V GF
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D + + L +S+ ++ A + D V + D +++ +I G C+ G A
Sbjct: 386 DVLVGNSLVDMYSK----CGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIY 246
+L +++ ++P+++ + T+I K+ +A +L+ M ++ N T+ +I
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI 306
G+ G+ EA EL +M P++ T L+ K + + G ++
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 307 VGQLKEATELLDEMVTKNID-------------PDAYTFSILVDGLCKEGKVKGAKNVLG 353
+ +K A L + K+ D D T++ L+ G G A +
Sbjct: 558 IHAVKNA---LTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M QG+ PN T +S++ H L+ V++ K +
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 122/278 (43%), Gaps = 24/278 (8%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIIS-NMVTSSILI 66
A +F R+ + P+II + +++ +K A+ L +ME G + N T +++I
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC--LNAQVQRALQFHDDVVAQG 124
Y G+ A + K+ + P+++T +L+ L A++ R + H V+ +
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR--EIHGCVLRRN 554
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+ LT +++ +++ + D ++++ LI G G
Sbjct: 555 LDAIHAVKNALTDTYAK--------SGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSY 606
Query: 185 KPALQLLRKIEGKLVQPD------VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
PAL L +++ + + P+ +++ ++ ++ + K V YS I+P +
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV-----FYSIANDYHIIPAL 661
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
+A++Y + +L+EA + + EM ++ P +F
Sbjct: 662 EHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 16/241 (6%)
Query: 149 VQRALQFHDDVVAQ-GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
+Q+AL+F + GF ++++ + L K K LR++ + +VV
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 208 TI---IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+I + L ++ V +A + M P+V+ Y +I C VG K+A LLD+M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 265 VTKNID--PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVT 322
PD YT+ IL+ C+ G G + I ++ EA + EM+
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKA----------IRRRMWEANRMFREMLF 276
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
+ PD T++ L+DG CK ++ A + M +G PN VTYNS + + + +E+
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 383 A 383
A
Sbjct: 337 A 337
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIE--GKLVQPDVVMYTTIIDSLCK--------- 215
D +Y+ +IN LC++G K A LL +++ G PD YT +I S C+
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258
Query: 216 --DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
+ + +A ++ EM+ + +P+V TY LI G C ++ A EL ++M TK P+
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG---------------QLKEATELLD 318
T+N + +++GA ++ M G + G + EA +L+
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVV 378
Query: 319 EMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
EMV + P YT+ ++ D L EG L M++G++
Sbjct: 379 EMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
Query: 58 NMVTSS---ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL 114
N+VT++ L+ C G + A + ++ + +PD + T+I LC ++A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 115 QFHDDVVAQGFRL--DQVSYSILTLKFSR-------RVISPTPVQRALQFHDDVVAQGFR 165
D + GFR D +Y+IL + R R + A + +++ +GF
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNL 225
D V+Y+ LI+G CK + AL+L ++ K P+ V Y + I + A +
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 226 YSEMVSKRI---LPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
M K++ +P TYT LI+ + EA +L+ EMV + P YT+ ++ D
Sbjct: 341 MRTM--KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Query: 283 LCKEG 287
L EG
Sbjct: 399 LSSEG 403
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G +KEA M + PD Y +N +++ LC+ G K A+ +L M + GF
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGF------- 231
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG-----------AKNVLGVMMKQGV 360
PD YT++IL+ C+ G G A + M+ +G
Sbjct: 232 ------------RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGF 279
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAKDI 386
P+VVTYN L+DG C + + +A ++
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALEL 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 55/255 (21%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGII--SNM 59
F++ A+ F R+ H P + + I+ +L ++ ++ A L QM+ G +
Sbjct: 178 EGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDT 237
Query: 60 VTSSILINCYCHLG-----------QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
T +ILI+ YC G ++ A + ++L +G+ PD +T+ LI G C
Sbjct: 238 YTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTN 297
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
++ RAL+ +D+ +G +QV+Y+
Sbjct: 298 RIGRALELFEDMKTKGCVPNQVTYNSF--------------------------------- 324
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQ--PDVVMYTTIIDSLCKDKLVTDAFNLY 226
+ Y + N + + A++++R ++ KL P YT +I +L + + +A +L
Sbjct: 325 IRYYSVTN------EIEGAIEMMRTMK-KLGHGVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 227 SEMVSKRILPNVFTY 241
EMV ++P +TY
Sbjct: 378 VEMVEAGLVPREYTY 392
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 154/391 (39%), Gaps = 65/391 (16%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + + ++ L K A ++ ME G+ + S +I G++ A
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
AK+L+ G QPD I + +I N ++ A + ++VV R +Y++L F +
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
+ +++ Q+ D ++ G + V Y+ LI K G K + L + ++
Sbjct: 665 MGM----MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 202 DVVMYTTIIDSLC----------------KDKL------------VTDAFNLYSEM---- 229
D + Y T++ L K+KL + + Y
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAM 780
Query: 230 -----VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
V K I+PN++ + +I G+C G+L EA L+ M + I P+ T+ IL+
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 285 KEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
+ G ++ A +D N +PD +S L+ GLC +
Sbjct: 841 EAGDIESA------------------------IDLFEGTNCEPDQVMYSTLLKGLCDFKR 876
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
A ++ M K G+ PN +Y L+ C
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 162/395 (41%), Gaps = 26/395 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+ + R + + + T+L ++Y A+S +M + G + + +I C
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
I S++ I + + PD T+ ++ LC A D + G R
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 131 SYS--ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
YS I +L RV+ A + ++ G + D+++Y I+IN + G+ A
Sbjct: 584 IYSSIIGSLGKQGRVVE------AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+L+ ++ ++P YT +I K ++ +M+ + PNV YTALI F
Sbjct: 638 ELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG----------- 297
G K + L M +I D + L+ GL + K + V+
Sbjct: 698 LKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL 757
Query: 298 ------VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
V + G A E++ + V K+I P+ Y + ++ G C G++ A N
Sbjct: 758 IRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
L M K+G+ PN+VTY LM H ++ A D+
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 167/390 (42%), Gaps = 60/390 (15%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++ + I+ SL K A +M SGI + + I+IN Y G+I A +
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ +++K +P + T+T LI G +++ Q+ D ++ G + V Y+ L F +
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCK--------------------- 180
+ + + + + D ++Y L++GL +
Sbjct: 700 K----GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 181 -MGQTKP----------------ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ +TKP A++++ K++ ++ P++ ++ TII C + +A+
Sbjct: 756 RLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII-PNLYLHNTIITGYCAAGRLDEAY 814
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
N M + I+PN+ TYT L+ G ++ A +L + N +PD ++ L+ GL
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGL 871
Query: 284 CKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNIDPDA 329
C + A ++ M G C EA +++ +M +I P +
Sbjct: 872 CDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRS 931
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
+ L+ LC+E K++ A+ + +M++ G
Sbjct: 932 INHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 177/405 (43%), Gaps = 53/405 (13%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
P S+++ ++ LVK++ + A + ++ +SG + +SS++++ C+ + AF
Sbjct: 129 PDSSVLD--SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAF 186
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRAL------------------------- 114
++ ++G L KGLC + + A+
Sbjct: 187 HCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYC 246
Query: 115 -----------QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQG 163
D + G+ +D+V Y+ L ++ + + A++ + +V +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCK----DNNMTMAMRLYLRMVERS 302
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
F LD ++ LI+G K+G + ++ K VQ +V Y +I S CK+ V A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 224 NLY-SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
L+ + S+ I NV YT LI+GF G + +A +LL M+ I PD T+ +L+
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKM 422
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCI-------VGQLKEATE-LLDEMVTKNIDPDAYTFSI 334
L K ++K A +L ++ G I +G ++ E LL E+ K+ + A ++
Sbjct: 423 LPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAV 482
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
+ LC + A + + M+ G P +YNS++ CL E
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVI--KCLFQE 525
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 110/292 (37%), Gaps = 18/292 (6%)
Query: 107 NAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRL 166
++ + A D V G LD Y L K + P ++ V+ G
Sbjct: 73 SSSISEAALVADFAVDNGIELDSSCYGALIRKLTEM---GQPGVAETFYNQRVIGNGIVP 129
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D ++ L K+ + A L +I P + ++D LC +AF+ +
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFNILVDGLCK 285
++ + ++ L G C G L EA +LD + P + L CK
Sbjct: 190 EQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCK 249
Query: 286 EGKVKGAKNVLGVMMIYGF--------------CIVGQLKEATELLDEMVTKNIDPDAYT 331
G A+ + M + G+ C + A L MV ++ + D
Sbjct: 250 RGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI 309
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
F+ L+ G K G + + + M+K+GV+ NV TY+ ++ +C V+ A
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA 361
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 171/376 (45%), Gaps = 19/376 (5%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIE-FGKILTSLVKMKHYPTAISLSHQM-ESSGIISNM 59
S+ + A+ FN + R E F +++ L K + + +L ++M ++ + N
Sbjct: 58 SNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNH 117
Query: 60 VTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA--LQFH 117
VT I+ Y + A K+ + +T +F L+ LC + V A L F
Sbjct: 118 VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDET-SFYNLVDALCEHKHVVEAEELCFG 176
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
+V+ GF + L L+ ++ + ++ + +G D SYSI ++
Sbjct: 177 KNVIGNGFSVSNTKIHNLILRGWSKL---GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
+CK G+ A++L ++++ + ++ DVV Y T+I ++ + V ++ EM + PN
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV-------- 289
V T+ +I C G++++A +LDEM + PD+ T+ L L K ++
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMI 353
Query: 290 -KGAKNVLG--VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
G + + VM++ F G L+ + M PD+ ++ ++D L ++G +
Sbjct: 354 RSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLD 413
Query: 347 GAKNVLGVMMKQGVKP 362
A+ M+++G+ P
Sbjct: 414 MAREYEEEMIERGLSP 429
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 137/306 (44%), Gaps = 40/306 (13%)
Query: 105 CLNAQVQRALQFHDDVVAQ-GFRLDQVSYSI---LTLKFSRRVISPTPVQRALQFHDDVV 160
C + Q+AL+F + V + GFR +++ + K+ IS + R + + V
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 161 AQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVT 220
+ V++ I+ + A+ K++ ++ + Y ++D+LC+ K V
Sbjct: 116 ------NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVV 168
Query: 221 DAFNLYSEMVSKRILPNVFT------YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+A L K ++ N F+ + ++ G+ +G + E +M T+ + D +
Sbjct: 169 EAEEL---CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLF 225
Query: 275 TFNILVDGLCKEGK----------VKGAKNVLGVM----MIYGFCIVGQLKEATELLDEM 320
+++I +D +CK GK +K + L V+ +I ++ + EM
Sbjct: 226 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
+ +P+ T + ++ LC++G+++ A +L M K+G +P+ +TY CL S +
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRL 339
Query: 381 NKAKDI 386
K +I
Sbjct: 340 EKPSEI 345
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 152/339 (44%), Gaps = 28/339 (8%)
Query: 45 SLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGL 104
L +ME +G ++ T +ILI+ Y +I V K+ K G++ D + +I+ L
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 105 CLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ-FHDDVVAQG 163
C+ + AL+F+ +++ +G +++ + T K I+ + +Q DD+V
Sbjct: 270 CIAGRGDLALEFYKEMMEKG-----ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ ++ L+ C G+ K AL+L+R+++ K + D + ++ LC+ + DA
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDAL 384
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
+ +++ +R L + Y +I G+ + +A E + + P T+ ++ L
Sbjct: 385 EIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHL 443
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
K + Q ++ L +EM+ I+PD+ + +V G +
Sbjct: 444 FK---------------------LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNK 382
+V A V M ++G+KP +Y+ + C S ++
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 141/338 (41%), Gaps = 28/338 (8%)
Query: 38 KHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITF 97
K + SL ++M G + T +I+I Y G A ++ G P + TF
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 98 TTLIKGLCLNA--QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF 155
LI LC V+ A + +++ GF D+ L + + + A
Sbjct: 752 KCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE----LVQDYLGCLCEVGNTKDAKSC 807
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
D + GF + V+YSI I LC++G+ + AL L EG+ D Y +I+ L +
Sbjct: 808 LDSLGKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ 866
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
+ A + + M P V YT+LI F QL++ E +M ++ +P T
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+ MI G+ +G+++EA M + PD T+S
Sbjct: 927 Y---------------------TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
++ LC+ K + A +L M+ +G+ P+ + + ++ G
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 112 RALQFHDDVVAQ----GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD 167
R L D++V++ G D +++IL + + + + L + + GF LD
Sbjct: 203 RNLDMVDELVSEMEKNGCDKDIRTWTILISVYGK----AKKIGKGLLVFEKMRKSGFELD 258
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
+Y+I+I LC G+ AL+ +++ K + + Y ++D + K + V ++
Sbjct: 259 ATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIAD 318
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
+MV + + L+ FC+ G++KEA EL+ E+ K + DA F ILV GLC+
Sbjct: 319 DMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRAN 378
Query: 288 KVKGAKNVLGVMM--------IYGFCIVGQLKE-----ATELLDEMVTKNIDPDAYTFSI 334
++ A ++ +M +YG I G L++ A E + + P T++
Sbjct: 379 RMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTE 438
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++ L K + + N+ M++ G++P+ V +++ GH + V +A
Sbjct: 439 IMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 28/304 (9%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLG--QIPFAFSVLAKILKKGYQPDTITFTTL 100
AI +M+ G+I + T LI C + A ++++ G+ PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 101 IKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVV 160
+ LC + A D + GF + V+YSI + R + ++ AL
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSI----YIRALCRIGKLEEALSELASFE 846
Query: 161 AQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVT 220
+ LDQ +Y +++GL + G + AL + ++ +P V +YT++I K+K +
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLE 906
Query: 221 DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILV 280
+M + P+V TYTA+I G+ +G+++EA M + PD T++ +
Sbjct: 907 KVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 281 DGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
+ LC+ K ++A +LL EM+ K I P F + GL
Sbjct: 967 NCLCQACKS---------------------EDALKLLSEMLDKGIAPSTINFRTVFYGLN 1005
Query: 341 KEGK 344
+EGK
Sbjct: 1006 REGK 1009
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 26/309 (8%)
Query: 36 KMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTI 95
K K + + +M SG + +I+I C G+ A ++++KG
Sbjct: 236 KAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLR 295
Query: 96 TFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF 155
T+ L+ + + +V DD+V R+ ++S + ++ AL+
Sbjct: 296 TYKMLLDCIAKSEKVDVVQSIADDMV----RICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
++ + LD + IL+ GLC+ + AL+++ ++ + + D +Y II +
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLR 410
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
V+ A + + P V TYT ++ + Q ++ L +EM+ I+PD+
Sbjct: 411 QNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+V G + +V EA ++ M K I P ++SI
Sbjct: 471 ITAVVAGHLGQNRV---------------------AEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 336 VDGLCKEGK 344
V LC+ +
Sbjct: 510 VKELCRSSR 518
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
LA+ + ++ T + + +L + K + S++ M IS L+
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C G+I A ++ ++ K D F L+KGLC ++ AL+ D + + +
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD--IMKRRK 394
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
LD D Y I+I+G +
Sbjct: 395 LD--------------------------------------DSNVYGIIISGYLRQNDVSK 416
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
AL+ I+ P V YT I+ L K K NL++EM+ I P+ TA++
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVA 476
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
G ++ EA ++ M K I P +++I V LC+ +
Sbjct: 477 GHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC--KDKLV 219
QG + Q +++I+I + G T A++ ++++ + P + +I LC K + V
Sbjct: 707 QGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNV 766
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
+A + EM+ +P+ + C VG K+A LD + P ++I
Sbjct: 767 EEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIY 825
Query: 280 VDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNI 325
+ LC+ GK++ A + L +++G G L++A + ++ M
Sbjct: 826 IRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGT 885
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
P + ++ L+ KE +++ M + +P+VVTY +++ G+ + +V +A
Sbjct: 886 KPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEA 943
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 50/411 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A +F+ +L++ + F ++ + H A SL +ME GI + T +IL++
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS 383
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G I A KI K G PDT+T ++ LC V ++ R+
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Query: 128 DQVSYSILTLKFSRR-----------------VISPTP--------------VQRALQFH 156
D+ S ++ + V+S T V+ F+
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFY 503
Query: 157 DDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD 216
G R D + Y+++I K + AL L + ++ + PD Y ++ L
Sbjct: 504 GKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV 563
Query: 217 KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
LV +A + +EM+ P TY A+I + +G L +A +L + M + P+ +
Sbjct: 564 DLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Query: 277 NILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVT 322
L++G + G V+ A +M +I + VG L+EA + D+M
Sbjct: 624 GSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 323 KNIDPD-AYTFSILVDGLCKE-GKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
PD A + S+L LC + G V A+++ + ++G +V+++ ++M
Sbjct: 684 SEGGPDVAASNSML--SLCADLGIVSEAESIFNALREKGT-CDVISFATMM 731
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 141/356 (39%), Gaps = 43/356 (12%)
Query: 14 RLLRTHPT--PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCH 71
R ++H + P++I + +L +L + + +M +G++ T +L++ Y
Sbjct: 133 RFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGK 192
Query: 72 LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
G + A + + ++ + PD +T T+++ + + RA +F A LD S
Sbjct: 193 AGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS 252
Query: 132 YSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
F + + +PV L Q L L K+G P + L
Sbjct: 253 ID----DFPKNGSAQSPVN---------------LKQ----FLSMELFKVGARNPIEKSL 289
Query: 192 RKIEGKLVQPD----VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
G P + T+ID K + DA NL+SEM+ + + T+ +I+
Sbjct: 290 HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT 349
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA--------------K 293
G L EA LL +M K I PD T+NIL+ G ++ A
Sbjct: 350 CGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD 409
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
V +++ C + E ++ EM +I D ++ +++ EG V AK
Sbjct: 410 TVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/434 (19%), Positives = 164/434 (37%), Gaps = 88/434 (20%)
Query: 24 IIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLA 83
++E+ ++ + K K + A+SL M++ G + T + L + + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++L G +P T+ +I + A+ ++ + G + ++V Y L F+
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
+ V+ A+Q+ + G + + + + LI K+G + A ++ K++ PDV
Sbjct: 635 M----VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 204 VMYTTIIDSLCKD-----------------------------------KLVTDAFNLYSE 228
+++ SLC D ++ +A + E
Sbjct: 691 AASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFNILVDGLCKEG 287
M +L + ++ ++ + GQL E EL EM V + + D TF L L K G
Sbjct: 750 MRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
Query: 288 -------KVKGAKN----------------VLGV------------------------MM 300
+++ A N +G+ +
Sbjct: 810 VPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAV 869
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
IY + G + A + M K ++PD T + LV K G V+G K V + +
Sbjct: 870 IYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGEL 929
Query: 361 KPNVVTYNSLMDGH 374
+P+ + ++ D +
Sbjct: 930 EPSQSLFKAVRDAY 943
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 137/299 (45%), Gaps = 26/299 (8%)
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRV 143
++L++G +PD TFTT+I N +RA+++ + + + G D V+ + + + R
Sbjct: 200 EMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR-- 257
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDV 203
V AL +D + +R+D V++S LI G L + +++ V+P++
Sbjct: 258 --AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
V+Y +IDS+ + K A +Y ++++ PN TY AL+ + +A + E
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVT- 322
M K + +N L+ +C + + + EA E+ +M
Sbjct: 376 MKEKGLSLTVILYNTLL-SMCADNRY--------------------VDEAFEIFQDMKNC 414
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ DPD++TFS L+ G+V A+ L M + G +P + S++ + +V+
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 6/299 (2%)
Query: 8 AVFIFNRLLRT-HPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
A + N LL T P+ +I + + K K + L +M GI + T + +I
Sbjct: 158 APLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII 217
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+C G A K+ G +PD +T +I V AL +D + +R
Sbjct: 218 SCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWR 277
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+D V++S L + +S L ++++ A G + + V Y+ LI+ + + +
Sbjct: 278 IDAVTFSTLIRIYG---VSGN-YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + + + P+ Y ++ + + + DA +Y EM K + V Y L+
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Query: 247 GFCIVGQLKEATELLDEMVT-KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+ EA E+ +M + DPD++TF+ L+ G+V A+ L M GF
Sbjct: 394 MCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 136 TLKFSRRVI----------SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
T+K SR VI ++++ + D+++ +G + D +++ +I+ + G K
Sbjct: 168 TMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPK 227
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
A++ K+ +PD V +ID+ + V A +LY +++ + T++ LI
Sbjct: 228 RAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLI 287
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFC 305
+ + G + +EM + P+ +N L+D + + AK +IY
Sbjct: 288 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGR------AKRPWQAKIIY--- 338
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV---MMKQGVKP 362
+++T P+ T++ LV G+ + + L + M ++G+
Sbjct: 339 ------------KDLITNGFTPNWSTYAALVRAY---GRARYGDDALAIYREMKEKGLSL 383
Query: 363 NVVTYNSLM 371
V+ YN+L+
Sbjct: 384 TVILYNTLL 392
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 27/329 (8%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+ ES G++ N+ + LI + LG+ AF V +K + G+ P+ T+ ++ LC +
Sbjct: 222 EKESCGVL-NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRS 280
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
+ A + ++ G + + F + + A ++ + L
Sbjct: 281 FMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKE----GKAEEAYSVYELAKTKEKSLPP 336
Query: 169 VSYSILINGLCKM-GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
+ LI LCK G A ++L + G+ + + ++ +I SLC+ + V DA L
Sbjct: 337 RFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLL 396
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
+M+SK P + +++ G L EA E+L M ++ + PD YT+ +++ G K
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK-- 454
Query: 288 KVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKG 347
G + EA E+L E K+ T+ L+ G CK +
Sbjct: 455 -------------------GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDE 495
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCL 376
A +L M + GV+PN YN L+ CL
Sbjct: 496 ALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 9/282 (3%)
Query: 6 RLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL 65
+ A +F++ TP+ + L +L K A S+ +M SG++S +
Sbjct: 248 KAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNI 307
Query: 66 INCYCHLGQIPFAFSV--LAKILKKGYQPDTITFTTLIKGLCLN-AQVQRALQFHDDVVA 122
I +C G+ A+SV LAK +K P + TLI LC N + A + D+
Sbjct: 308 ITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSG 365
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ R +S + R V+ A D++++G ++++++ K G
Sbjct: 366 EARRRGIKPFSDVIHSLCRM----RNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
A ++L+ +E + ++PDV YT II K ++ +A + +E K + TY
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLC 284
ALI G+C + + EA +LL+EM + P+A +N L+ C
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
LI K+G++K A + K E P+ Y +++LCK + A ++ +M+
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK-EGKVKGA 292
+L +I FC G+ +EA + + TK L+ LCK +G + A
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 293 KNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+ +LG + +I+ C + +K+A LL +M++K P F+++V
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
K G + AK VL +M +G+KP+V TY ++ G+ +++A++I
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
++++L++ LCK G K LLR++ + V+PD + + C+ + A L EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID---PDAYTFNILVDGLCKE 286
+ P FTY A I FC G + EA +L D M+TK P A TF +++ L K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
K + E EL+ M++ PD T+ +++G+C KV
Sbjct: 355 DKAE---------------------ECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD 393
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
A L M +G P++VTYN + C + ++A
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 430
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
QP++ + ++D+LCK LV + L M R+ P+ T+ L +G+C V K+A
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLD 318
+LL+EM+ P+ +T+ +D FC G + EA +L D
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDT---------------------FCQAGMVDEAADLFD 327
Query: 319 EMVTKNID---PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
M+TK P A TF++++ L K K + ++G M+ G P+V TY +++G C
Sbjct: 328 FMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMC 387
Query: 376 LVSEVNKA 383
+ +V++A
Sbjct: 388 MAEKVDEA 395
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 29/286 (10%)
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
QP+ F L+ LC V+ + + D ++++L + R V P +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCR-VRDP---K 285
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI--EGKLVQ-PDVVMYT 207
+A++ ++++ G + + +Y I+ C+ G A L + +G V P +
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
+I +L K+ + F L M+S LP+V TY +I G C+ ++ EA + LDEM K
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
PD T+N + LC+ K EA +L MV P
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKT---------------------DEALKLYGRMVESRCAP 444
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
T+++L+ + GA N M K+ +V TY ++++G
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 490
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 30/338 (8%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
++L++ C G + ++L + ++ +PD TF L G C ++A++ ++++
Sbjct: 238 NMLLDALCKCGLVKEGEALLRR-MRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIE 296
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD---QVSYSILINGLC 179
G + + +Y F + + V A D ++ +G + +++++I L
Sbjct: 297 AGHKPENFTYCAAIDTFCQAGM----VDEAADLFDFMITKGSAVSAPTAKTFALMIVALA 352
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
K + + +L+ ++ PDV Y +I+ +C + V +A+ EM +K P++
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
TY + C + EA +L MV P T+N+L+ + GA N M
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 300 --------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
MI G + KEA LL+E+V K + F + L + G +
Sbjct: 473 DKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL 532
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
K V M K YN M +SE K+
Sbjct: 533 KAIHKVSEHMKK--------FYNHSMARRFALSEKRKS 562
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 7/285 (2%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
R +R P F + +++ A+ L +M +G T I+ +C G
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 74 QIPFAFSVLAKILKKGYQ---PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A + ++ KG P TF +I L N + + + +++ G D
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
+Y + + V A +F D++ +G+ D V+Y+ + LC+ +T AL+L
Sbjct: 378 TYKDVI----EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++ P V Y +I + AFN ++EM + + +V TY A+I G
Sbjct: 434 YGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFD 493
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
+ KEA LL+E+V K + F+ + L + G +K V
Sbjct: 494 CHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKV 538
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAY 330
P+ FN+L+D LCK G +KE LL M + + PDA
Sbjct: 232 PEINAFNMLLDALCK---------------------CGLVKEGEALLRRMRHR-VKPDAN 269
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
TF++L G C+ K A +L M++ G KP TY + +D C V++A D+
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 23/276 (8%)
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ----GFRLDQVSYSILINGLC 179
FR + S+ IL LK R R DDV+A+ G+ L ++ LI
Sbjct: 79 NFRHSRSSHLILILKLGR--------GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK-LVTDAFNLYSEMVSKRILPNV 238
+ + L K+ P I+D L + + AF L+ ++PN
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
+Y L+ FC+ L A +L +M+ +++ PD ++ IL+ G C++G+V GA +L
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 299 MMIYGF----------CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
M+ GF C G E + L+EM++K P + LV G C GKV+ A
Sbjct: 251 MLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+V+ V+MK G + T+ ++ C E K K
Sbjct: 311 CDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIK 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 12 FNRLLRTHPTPSIIEFGKILTSLVKMKHY-PTAISLSHQMESSGIISNMVTSSILINCYC 70
F ++L + TP +IL LV + Y A L G++ N + ++L+ +C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A+ + K+L++ PD ++ LI+G C QV A++ DD++ +GF D+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT 261
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
L ++ ++++++GF + L+ G C G+ + A +
Sbjct: 262 LIGGLC--------DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 313
Query: 191 LRKI--EGKLVQPDVVMYTTIIDSLCKD 216
+ + G+ + D + +I +C +
Sbjct: 314 VEVVMKNGETLHSDT--WEMVIPLICNE 339
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 171/402 (42%), Gaps = 37/402 (9%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTS-S 63
L A+ +F L + + F +L +VK A + + +++ +T+ +
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF----HDD 119
+L+ C + + A V ++ +G PD ++ L+KG CL +++ A
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC 179
+ +G D V Y IL + V A++ ++ +G + + Y +
Sbjct: 217 ISQKGSGEDIVVYRILL----DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI----- 267
Query: 180 KMGQTKPALQLLRKIEGKLVQ-------PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+ G + + + + +++ L + P + Y+ + L ++ + + + M SK
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLD-EMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
P F Y A + C G+LKEA +++ EM+ + P +N+L+ GLC +GK
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 292 AKNVLGVM---------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
A L M ++ G C GQ EA+++++EM+ K+ P T+ +++
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
GLC + A L M+ Q + P + +L + C +
Sbjct: 448 KGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCA 489
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+Y T+ID L K V + + M + ++I F G+L++A L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF----------------CIVG 308
N + +F+ L+ + KE +++ A ++ YG+ C V
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFR-KYCYGWEVNSRITALNLLMKVLCQVN 166
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM----KQGVKPNV 364
+ A+++ EM + PD ++ IL+ G C EGK++ A ++L M ++G ++
Sbjct: 167 RSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDI 226
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
V Y L+D C EV+ A +I
Sbjct: 227 VVYRILLDALCDAGEVDDAIEI 248
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 171/402 (42%), Gaps = 37/402 (9%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTS-S 63
L A+ +F L + + F +L +VK A + + +++ +T+ +
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF----HDD 119
+L+ C + + A V ++ +G PD ++ L+KG CL +++ A
Sbjct: 157 LLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR 216
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC 179
+ +G D V Y IL + V A++ ++ +G + + Y +
Sbjct: 217 ISQKGSGEDIVVYRILL----DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI----- 267
Query: 180 KMGQTKPALQLLRKIEGKLVQ-------PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+ G + + + + +++ L + P + Y+ + L ++ + + + M SK
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLD-EMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
P F Y A + C G+LKEA +++ EM+ + P +N+L+ GLC +GK
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 292 AKNVLGVM---------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
A L M ++ G C GQ EA+++++EM+ K+ P T+ +++
Sbjct: 388 AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
GLC + A L M+ Q + P + +L + C +
Sbjct: 448 KGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCA 489
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+Y T+ID L K V + + M + ++I F G+L++A L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF----------------CIVG 308
N + +F+ L+ + KE +++ A ++ YG+ C V
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFR-KYCYGWEVNSRITALNLLMKVLCQVN 166
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM----KQGVKPNV 364
+ A+++ EM + PD ++ IL+ G C EGK++ A ++L M ++G ++
Sbjct: 167 RSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDI 226
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
V Y L+D C EV+ A +I
Sbjct: 227 VVYRILLDALCDAGEVDDAIEI 248
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 147/352 (41%), Gaps = 51/352 (14%)
Query: 50 MESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ 109
+ S +++ ++LI+ Y Q A S+ ++L+ Y P T+ LIK C+
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQV 169
++RA ++ ++ +SP + +
Sbjct: 228 IERA-------------------EVVLVEMQNHHVSPKTIGVTV---------------- 252
Query: 170 SYSILINGLCKM-GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
Y+ I GL K G T+ A+ + ++++ +P Y +I+ K ++ LY E
Sbjct: 253 -YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 311
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M S + PN+ TYTAL+ F G ++A E+ +++ ++PD Y +N L++ + G
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
GA + +M M+ + G +A + +EM I P + +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
L+ K V + ++ M + GV+P+ NS+++ + + + K + I
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 483
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 150/373 (40%), Gaps = 51/373 (13%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
L ++ P +I F ++ + + Y A SL Q+ S + T ++LI YC G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
I A VL ++ P TI T NA ++ ++ R +I
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTV------YNAYIEGLMK----------RKGNTEEAI 271
Query: 135 LTL-KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ R PT +Y+++IN K ++ + +L +
Sbjct: 272 DVFQRMKRDRCKPT--------------------TETYNLMINLYGKASKSYMSWKLYCE 311
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
+ +P++ YT ++++ ++ L A ++ ++ + P+V+ Y AL+ + G
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV------LGV--------M 299
A E+ M +PD ++NI+VD + G A+ V LG+ +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
++ + + + ++ EM ++PD + + +++ + G+ + +L M
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 360 VKPNVVTYNSLMD 372
++ TYN L++
Sbjct: 492 CTADISTYNILIN 504
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 148/377 (39%), Gaps = 29/377 (7%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIE---FGKILTSLVKMK-HYPTAISLSHQMESSGII 56
M+ + A + + H +P I + + L+K K + AI + +M+
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 57 SNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF 116
T +++IN Y + ++ + ++ +P+ T+T L+ ++A +
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 117 HDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILIN 176
+ + G D Y+ L +SR + P A + + G D+ SY+I+++
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSR---AGYPYG-AAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 177 GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP 236
+ G A + +++ + P + + ++ + K + VT + EM + P
Sbjct: 400 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
+ F +++ + +GQ + ++L EM D T+NIL++
Sbjct: 460 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN--------------- 504
Query: 297 GVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
IYG G L+ EL E+ KN PD T++ + ++ V M+
Sbjct: 505 ----IYG--KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 357 KQGVKPNVVTYNSLMDG 373
G P+ T L+
Sbjct: 559 DSGCAPDGGTAKVLLSA 575
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 135/350 (38%), Gaps = 25/350 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F R+ R P+ + ++ K + L +M S N+ T + L+N
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G A + ++ + G +PD + L++ A + + G
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D+ SY+I+ + R + A +++ G S+ +L++ K
Sbjct: 390 DRASYNIMVDAYGRAGLHSD----AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+++++ V+PD + ++++ + T + +EM + ++ TY LI
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
+ G L+ EL E+ KN PD T+ + ++ +Y C+
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK-------------KLYVKCL- 551
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
E+ +EM+ PD T +L+ E +V+ +VL M K
Sbjct: 552 -------EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 16 LRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQI 75
L++H TP+ F + K A+ +M+ G +++ + +I CYC +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 76 PFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL 135
+ +L+++ G P++IT+TT++ L + + AL+ + G + D + Y+ L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 136 --TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
TL + R+ V F ++ G ++ +Y+ +I C + A++LL++
Sbjct: 336 IHTLARAGRLEEAERV-----FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 194 IE-GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-NVFTYTALIYGFCIV 251
+E L PDV Y ++ S K V + L EMV+K L + TYT LI C
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+ A L +EM++++I P T +L++ + K+ + A+ + +M
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+++I I+G CK + + AL +++++G +P V+ YTTII C+ + + SEM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ PN TYT ++ + +EA + M PD+ +N L+ L + G++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 290 KGAKNV-------LGV--------MMIYGFCIVGQLKEATELLDEMVTKNI-DPDAYTFS 333
+ A+ V LGV MI +C + +A ELL EM + N+ +PD +T+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 334 ILVDGLCKEGKVKGAKNVLGVMM-KQGVKPNVVTYNSLMDGHC 375
L+ K G V +L M+ K + + TY L+ C
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLC 448
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y +D L K K D + E + L + T ++ F G+ +EA + D +
Sbjct: 124 YDMAVDILGKAK-KWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
++ + + N+L+D LCKE +V+ A+ VL QLK +I
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLL-----------QLK-----------SHI 220
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
P+A+TF+I + G CK +V+ A + M G +P V++Y +++ +C
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 16 LRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQI 75
L++H TP+ F + K A+ +M+ G +++ + +I CYC +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 76 PFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSIL 135
+ +L+++ G P++IT+TT++ L + + AL+ + G + D + Y+ L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 136 --TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
TL + R+ V F ++ G ++ +Y+ +I C + A++LL++
Sbjct: 336 IHTLARAGRLEEAERV-----FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 194 IE-GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP-NVFTYTALIYGFCIV 251
+E L PDV Y ++ S K V + L EMV+K L + TYT LI C
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+ A L +EM++++I P T +L++ + K+ + A+ + +M
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+++I I+G CK + + AL +++++G +P V+ YTTII C+ + + SEM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ PN TYT ++ + +EA + M PD+ +N L+ L + G++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 290 KGAKNV-------LGV--------MMIYGFCIVGQLKEATELLDEMVTKNI-DPDAYTFS 333
+ A+ V LGV MI +C + +A ELL EM + N+ +PD +T+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 334 ILVDGLCKEGKVKGAKNVLGVMM-KQGVKPNVVTYNSLMDGHC 375
L+ K G V +L M+ K + + TY L+ C
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLC 448
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y +D L K K D + E + L + T ++ F G+ +EA + D +
Sbjct: 124 YDMAVDILGKAK-KWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI 325
++ + + N+L+D LCKE +V+ A+ VL QLK +I
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLL-----------QLK-----------SHI 220
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
P+A+TF+I + G CK +V+ A + M G +P V++Y +++ +C
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 144/334 (43%), Gaps = 53/334 (15%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+L+ CY + + F V ++ G+ IT TLI +
Sbjct: 169 LLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH------------------YSS 210
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
++D + + I +R+ ++++ I+I LCK G+
Sbjct: 211 KSKIDDLVWRIYECAIDKRIYP---------------------NEITIRIMIQVLCKEGR 249
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K + LL +I GK P V++ T+++ + ++ + ++ +L ++ K ++ + Y+
Sbjct: 250 LKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSI 309
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---- 299
++Y G L A ++ DEM+ + +++ + + V C++G VK A+ +L M
Sbjct: 310 VVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESG 369
Query: 300 ----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
+I GF G ++ E + MVT+ + P F+ +V + K V A
Sbjct: 370 VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRAN 429
Query: 350 NVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+L + +G P+ TY+ L+ G +++++A
Sbjct: 430 EILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 18/300 (6%)
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
+ K P+ IT +I+ LC +++ + D + + + I+ RV+
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRC----LPSVIVNTSLVFRVLE 281
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
++ ++ ++ + +D + YSI++ K G A ++ ++ + + +
Sbjct: 282 EMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV 341
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
YT + C+ V +A L SEM + P T+ LI GF G ++ E + MV
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG--------------VMMIYGFCIVGQLK 311
T+ + P FN +V + K V A +L +I GF +
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+A +L EM + + P F L+ GLC GKV+ + L +M K+ ++PN Y++L+
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 148/367 (40%), Gaps = 18/367 (4%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
+L L +F RL T S+I ++ K K + I N +T
Sbjct: 179 YLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIR 238
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
I+I C G++ +L +I K P I T+L+ + +++ ++ ++ +
Sbjct: 239 IMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
+D + YSI+ ++ + A + D+++ +GF + Y++ + C+ G
Sbjct: 299 NMVVDTIGYSIVVYAKAKE----GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K A +LL ++E V P + +I + MV++ ++P+ +
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---- 299
++ + + A E+L + + K PD +T++ L+ G + + A + M
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Query: 300 ----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
+I G C G+++ + L M + I+P+A + L+ K G A
Sbjct: 475 MSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNAD 534
Query: 350 NVLGVMM 356
V M+
Sbjct: 535 RVYNEMI 541
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+I + S+L ++L K DTI ++ ++ + A + D+++ +GF + Y+
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ F R V+ A + ++ G +++ LI G + G + L+
Sbjct: 344 V----FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV 399
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
+ + + P + ++ S+ K + V A + ++ + K +P+ TY+ LI GF
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------------- 299
+ +A +L EM + + P F L+ GLC GKV+ + L +M
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 300 MIYGFCIVGQLKEATELLDEMVT 322
+I F +G A + +EM++
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMIS 542
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A L +ME SG+ T + LI + G ++ +G P F ++K
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV--- 159
+ V RA + + +GF D+ +YS L F I + +AL+ ++
Sbjct: 418 SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF----IEGNDIDQALKLFYEMEYR 473
Query: 160 -VAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
++ GF + + LI GLC G+ + + L+ ++ +L++P+ +Y +I + K
Sbjct: 474 KMSPGFEV----FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 219 VTDAFNLYSEMVSKR 233
T+A +Y+EM+S R
Sbjct: 530 KTNADRVYNEMISVR 544
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 147/352 (41%), Gaps = 51/352 (14%)
Query: 50 MESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ 109
+ S +++ ++LI+ Y Q A S+ ++L+ Y P T+ LIK C+
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQV 169
++RA ++ ++ +SP + +
Sbjct: 206 IERA-------------------EVVLVEMQNHHVSPKTIGVTV---------------- 230
Query: 170 SYSILINGLCKM-GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
Y+ I GL K G T+ A+ + ++++ +P Y +I+ K ++ LY E
Sbjct: 231 -YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 289
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M S + PN+ TYTAL+ F G ++A E+ +++ ++PD Y +N L++ + G
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 289 VKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
GA + +M M+ + G +A + +EM I P + +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
L+ K V + ++ M + GV+P+ NS+++ + + + K + I
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 461
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 150/373 (40%), Gaps = 51/373 (13%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
L ++ P +I F ++ + + Y A SL Q+ S + T ++LI YC G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
I A VL ++ P TI T NA ++ ++ R +I
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTV------YNAYIEGLMK----------RKGNTEEAI 249
Query: 135 LTL-KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ R PT +Y+++IN K ++ + +L +
Sbjct: 250 DVFQRMKRDRCKPT--------------------TETYNLMINLYGKASKSYMSWKLYCE 289
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
+ +P++ YT ++++ ++ L A ++ ++ + P+V+ Y AL+ + G
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV------LGV--------M 299
A E+ M +PD ++NI+VD + G A+ V LG+ +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
++ + + + ++ EM ++PD + + +++ + G+ + +L M
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 360 VKPNVVTYNSLMD 372
++ TYN L++
Sbjct: 470 CTADISTYNILIN 482
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 148/377 (39%), Gaps = 29/377 (7%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIE---FGKILTSLVKMK-HYPTAISLSHQMESSGII 56
M+ + A + + H +P I + + L+K K + AI + +M+
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 57 SNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQF 116
T +++IN Y + ++ + ++ +P+ T+T L+ ++A +
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 117 HDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILIN 176
+ + G D Y+ L +SR + P A + + G D+ SY+I+++
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSR---AGYPYG-AAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 177 GLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILP 236
+ G A + +++ + P + + ++ + K + VT + EM + P
Sbjct: 378 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
+ F +++ + +GQ + ++L EM D T+NIL++
Sbjct: 438 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN--------------- 482
Query: 297 GVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
IYG G L+ EL E+ KN PD T++ + ++ V M+
Sbjct: 483 ----IYG--KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 357 KQGVKPNVVTYNSLMDG 373
G P+ T L+
Sbjct: 537 DSGCAPDGGTAKVLLSA 553
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 135/350 (38%), Gaps = 25/350 (7%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F R+ R P+ + ++ K + L +M S N+ T + L+N
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G A + ++ + G +PD + L++ A + + G
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
D+ SY+I+ + R + A +++ G S+ +L++ K
Sbjct: 368 DRASYNIMVDAYGRAGLHSD----AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+++++ V+PD + ++++ + T + +EM + ++ TY LI
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
+ G L+ EL E+ KN PD T+ + ++ +Y C+
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK-------------KLYVKCL- 529
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
E+ +EM+ PD T +L+ E +V+ +VL M K
Sbjct: 530 -------EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 133 SILTL-KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLL 191
+I TL K S+ + ++ ++ + ++G+ + SYS++I+ LCK G+ + + L
Sbjct: 361 AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTAL 420
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
++++ + + PDV +Y +I++ CK +++ A L+ EM + N+ TY LI
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEE 480
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM----------- 300
G+ +E+ L D+M+ + I+PD + L++GLCKE K++ A V M
Sbjct: 481 GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRV 540
Query: 301 ----IYGFCIVGQLKEATELLDE 319
+ C G EA++LL E
Sbjct: 541 LSEFVLNLCSNGHSGEASQLLRE 563
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 26/281 (9%)
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
VL K K G P + + I L ++ A + + +V+ F +D L S
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVS 339
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ P A++F +V+ G + S L LC+ ++ ++ + K
Sbjct: 340 --AVDPDS---AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYF 394
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
++ Y+ +I LCK V +++ EM + + P+V Y ALI C ++ A +L
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
DEM + + T+N+L+ L +EG+ +E+ L D+M
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEA---------------------EESLRLFDKM 493
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+ + I+PD + L++GLCKE K++ A V M++ K
Sbjct: 494 LERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHK 534
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
++ T P+I K+ +L + I + S G S + + S++I+ C G+
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 75 IPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSI 134
+ +++ L ++ K+G PD + LI+ C ++ A + D++ +G +++ +Y++
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
L K S + +L+ D ++ +G D+ Y LI GLCK + + A+++ RK
Sbjct: 473 LIRKLSEE----GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 144/333 (43%), Gaps = 30/333 (9%)
Query: 56 ISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQV-QRAL 114
I+ + + ++++ C + AF +L ++ +PD + + + + + + +R +
Sbjct: 220 INGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV 279
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSIL 174
V+ + +L S F +IS + A + + +V+ F +D L
Sbjct: 280 -----VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDAL 334
Query: 175 INGLCKMGQTKPALQLLRKIE-GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
I + + L+ + GKL P + + + +LC+ Y + SK
Sbjct: 335 IGSVSAVDPDSAVEFLVYMVSTGKL--PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKG 392
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
+ +Y+ +I C G+++E+ L EM + + PD +N L++ CK ++ AK
Sbjct: 393 YFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAK 452
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
+L DEM + + T+++L+ L +EG+ + + +
Sbjct: 453 ---------------------KLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+++G++P+ Y SL++G C +++ A ++
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 156/402 (38%), Gaps = 65/402 (16%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAK 84
I + I SL + + +L Q++S+ I+ + LI+ + AF VL +
Sbjct: 83 ISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEE 142
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
G + L+ GL + A + + +G L+ + + + F R
Sbjct: 143 AFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCR--- 199
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILI-NGLCKMGQTKPALQLLRKIEGKLVQPDV 203
+ + L+ D+V ++ ++LI + LCK + A +L ++ +PD
Sbjct: 200 -SSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDF 258
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMV---SKR---ILPNVFTYTALIYGFCIVGQLKEA 257
+ Y I ++ +VT NLY V KR + P Y A I +L EA
Sbjct: 259 MAYRVIAEAF----VVTG--NLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEA 312
Query: 258 TELLDEMVT-----------------KNIDPDA-----------------YTFNILVDGL 283
E+ + +V+ +DPD+ T + L L
Sbjct: 313 KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNL 372
Query: 284 CKEGKV------------KGAKNVLGV--MMIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
C+ K KG + L +MI C G+++E+ L EM + + PD
Sbjct: 373 CRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDV 432
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
++ L++ CK ++ AK + M +G K N+ TYN L+
Sbjct: 433 SLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLI 474
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 32/276 (11%)
Query: 141 RRVISPTPVQR------------ALQFHDDVVAQ-GFRLDQVSYSILINGLCKMGQTKPA 187
R ISP+ V R AL F + Q G+ D +SY + L Q
Sbjct: 42 RHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAM 101
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS--KRILPNVFTYTALI 245
L ++++ + D +Y ++ID+L + AF + E S + I P+V L+
Sbjct: 102 DALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCN--RLL 159
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK----------VKGAK-- 293
G G A +L +M K + + F + + C+ + VK A
Sbjct: 160 AGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLN 219
Query: 294 ---NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
+++ +++++ C + +A +L+E+ + PD + ++ + G + +
Sbjct: 220 INGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV 279
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
VL K GV P Y + + + +AK++
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV 315
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 56/410 (13%)
Query: 5 LRLAVFIFNRL--LRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTS 62
L L F+F R L +H T S IL+ H I L+ ++ ++ + V
Sbjct: 87 LSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLK 146
Query: 63 SI--LINCYCHLGQIPFAFSVLAKILKKGYQPD-TITFTTLIKGLCLNAQV--------- 110
LI Y G PF F +L K + D + ++ +NAQ+
Sbjct: 147 VFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITE 206
Query: 111 ---QRALQFHDDVVAQGFRLDQVS-----------------YSILTLKFSRRVISPTPVQ 150
+R + + F LD VS ++ + + F R + V+
Sbjct: 207 VSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEM-VE 265
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
R + ++ V G + SY++L+ C G A ++ +++ + V D+V Y T+I
Sbjct: 266 RIWREMEEEV--GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
LC + V A L+ +M K I TY L+ G+C G + + EM K +
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNI-DPDA 329
D T LV+GLC + + + V+ EA +++ + V + + P
Sbjct: 384 ADGLTIEALVEGLCDD---RDGQRVV---------------EAADIVKDAVREAMFYPSR 425
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
+ +LV LC++GK+ A N+ M+ +G KP+ TY + +DG+ +V +
Sbjct: 426 NCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 9/249 (3%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILINCYCHLGQIPFAFS 80
P+ F ++ S + + +ME G N+ + ++L+ YC G + A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
V ++ +G D + + T+I GLC N +V +A + D+ +G ++Y L +
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC--KMGQ--TKPALQLLRKIEG 196
+ V L + ++ +GF D ++ L+ GLC + GQ + A + +
Sbjct: 363 K----AGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVRE 418
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
+ P Y ++ LC+D + A N+ +EMV K P+ TY A I G+ IVG +
Sbjct: 419 AMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEET 478
Query: 257 ATELLDEMV 265
+ L EM
Sbjct: 479 SALLAIEMA 487
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE-- 228
+ +LI + A+ ++RK+ + + + +I + + + ++ + +Y E
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 229 ------------MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYT 275
M+ K I PN T+ +++ F G+ + + EM + P+ Y+
Sbjct: 225 GLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 276 FNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+N+L++ +C G + EA ++ +EM + + D ++ +
Sbjct: 284 YNVLMEA---------------------YCARGLMSEAEKVWEEMKVRGVVYDIVAYNTM 322
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
+ GLC +V AK + M +G++ +TY L++G+C +V+
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVD 368
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA 152
DT + +I GLC + A +++ G + D +Y+++ ++FS + RA
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM-IRFS-------SLGRA 64
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
+ + +++ +G D ++Y+ +I+GLCK Q K A + + V + T+I+
Sbjct: 65 EKLYAEMIRRGLVPDTITYNSMIHGLCK--QNKLA-------QARKVSKSCSTFNTLING 115
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
CK V D NL+ EM + I+ NV TYT LI+GF VG A ++ EMV+ +
Sbjct: 116 YCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 273 AYTFNILVDGLCKEGKVKGA 292
+ TF ++ LC +++ A
Sbjct: 176 SITFRDILPQLCSRKELRKA 195
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNL 225
+D Y+I+I+GLCK G+ A + + +QPDV Y +I + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
Y+EM+ + ++P+ TY ++I+G C +L +A + + TFN L++G CK
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 286 EGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
+VK N+ M +I+GF VG A ++ EMV+ + + T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 332 FSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
F ++ LC +++ A V ++ K + N VT
Sbjct: 179 FRDILPQLCSRKELRKA--VAMLLQKSSMVSNNVT 211
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D Y II LCK +A N+++ ++ + P+V TY +I L A +L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
EM+ + + PD T+N ++ GLCK+ K+ A+ V
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-------------------------- 102
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
TF+ L++G CK +VK N+ M ++G+ NV+TY +L+ G V + N
Sbjct: 103 ----SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFN 158
Query: 382 KAKDI 386
A DI
Sbjct: 159 TALDI 163
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 55/243 (22%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
I+ L K + A ++ + SG+ ++ T +++I + LG+ A + A+++++G
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR---AEKLYAEMIRRG 75
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
PDTIT+ ++I GLC ++ +A +VS S T
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQA--------------RKVSKSCST------------- 108
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
++ LING CK + K + L ++ + + +V+ YTT+
Sbjct: 109 ---------------------FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTL 147
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL---DEMVT 266
I + A +++ EMVS + + T+ ++ C +L++A +L MV+
Sbjct: 148 IHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVS 207
Query: 267 KNI 269
N+
Sbjct: 208 NNV 210
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 143/332 (43%), Gaps = 43/332 (12%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK-----GLCLNAQ-VQRALQFH 117
+LI Y LG A VL+ + K G P+ I++T L++ G C NA+ + R +Q
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ-- 201
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD---DVVAQGFRLDQVSYSIL 174
+ G ++Y I+ F + + A + + D + DQ Y ++
Sbjct: 202 ----SSGPEPSAITYQIILKTF----VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
Query: 175 INGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI 234
I K G + A ++ + GK V V Y +++ K V+ +Y +M I
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDI 310
Query: 235 LPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKN 294
P+V +Y LI + + +EA + +EM+ + P +NIL+D
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA------------ 358
Query: 295 VLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
F I G +++A + M I PD ++++ ++ ++GA+
Sbjct: 359 ---------FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 355 MMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ G +PN+VTY +L+ G+ ++V K ++
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 158/379 (41%), Gaps = 39/379 (10%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
L + TP++I + ++ S + A ++ +M+SSG + +T I++ + +
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 224
Query: 75 IPFAFSVLAKIL---KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
A V +L K +PD + +I ++A + +V +G V+
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 132 Y-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y S+++ + S + +S + +D + + D VSY++LI + + + AL +
Sbjct: 285 YNSLMSFETSYKEVS--------KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSV 336
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++ V+P Y ++D+ +V A ++ M RI P++++YT ++ +
Sbjct: 337 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 396
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
++ A + + +P+ T+ L+ G K A +V +M +Y
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK------ANDVEKMMEVY-------- 442
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV---MMKQGVKPNVVTY 367
++M I + + ++D G+ K + LG M GV P+
Sbjct: 443 -------EKMRLSGIKANQTILTTIMDA---SGRCKNFGSALGWYKEMESCGVPPDQKAK 492
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N L+ E+ +AK++
Sbjct: 493 NVLLSLASTQDELEEAKEL 511
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 16/238 (6%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ ++ + +LI K+G A ++L + P+V+ YT +++S + +A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE----LLDEMVTKNIDPDAYTFNIL 279
++ M S P+ TY ++ F + KEA E LLDE + + PD ++++
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-LKPDQKMYHMM 253
Query: 280 VDGLCKEGKVKGAKNVLGVMMIYG-----------FCIVGQLKEATELLDEMVTKNIDPD 328
+ K G + A+ V M+ G KE +++ D+M +I PD
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 313
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++++L+ + + + A +V M+ GV+P YN L+D + V +AK +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 172/415 (41%), Gaps = 63/415 (15%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISL-SHQMESSGIISNMV 60
S R +VF R P++ I+ ++ + K Y +ISL + + S I+ N+V
Sbjct: 165 SKLARQSVFSNTR-------PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVV 217
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDD 119
+ + +IN +C G + A V IL + P ++T+ L KGL ++ A +
Sbjct: 218 SYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLRE 277
Query: 120 VVAQGFRLDQVSYS-------------------------------ILTLKFSRRVISPTP 148
++++G D Y+ I+ F
Sbjct: 278 MLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGN 337
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+ A++ + ++ + FR+ + ++L+ K G+ A L ++ P+++ +
Sbjct: 338 DKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNS 397
Query: 209 -----IIDSLCKDKLVTDAFNLY----SEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
+++ K ++A N + S++ SK + + Y ++ FC G L EA
Sbjct: 398 DTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAER 457
Query: 260 LLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV------------ 307
E V++++ DA + ++D K ++ A +L M+ +V
Sbjct: 458 FFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELI 517
Query: 308 --GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
G+L E+ E+L +M + PD + ++V GLC + AK+++G M++ V
Sbjct: 518 KNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNV 572
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 137/326 (42%), Gaps = 31/326 (9%)
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+LI Y LG A VL+ + K G P+ I++T L++ + A + +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD---DVVAQGFRLDQVSYSILINGLCK 180
G ++Y I+ F + + A + + D + DQ Y ++I K
Sbjct: 211 GPEPSAITYQIILKTF----VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
G + A ++ + GK V V Y +++ K V+ +Y +M I P+V +
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 323
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM 300
Y LI + + +EA + +EM+ + P +NIL+D
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA------------------ 365
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
F I G +++A + M I PD ++++ ++ ++GA+ + G
Sbjct: 366 ---FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAKDI 386
+PN+VTY +L+ G+ ++V K ++
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEV 448
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 158/379 (41%), Gaps = 39/379 (10%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQ 74
L + TP++I + ++ S + A ++ +M+SSG + +T I++ + +
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 231
Query: 75 IPFAFSVLAKIL---KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
A V +L K +PD + +I ++A + +V +G V+
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 132 Y-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
Y S+++ + S + +S + +D + + D VSY++LI + + + AL +
Sbjct: 292 YNSLMSFETSYKEVS--------KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSV 343
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
++ V+P Y ++D+ +V A ++ M RI P++++YT ++ +
Sbjct: 344 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 403
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQL 310
++ A + + +P+ T+ L+ G K A +V +M +Y
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK------ANDVEKMMEVY-------- 449
Query: 311 KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV---MMKQGVKPNVVTY 367
++M I + + ++D G+ K + LG M GV P+
Sbjct: 450 -------EKMRLSGIKANQTILTTIMDA---SGRCKNFGSALGWYKEMESCGVPPDQKAK 499
Query: 368 NSLMDGHCLVSEVNKAKDI 386
N L+ E+ +AK++
Sbjct: 500 NVLLSLASTQDELEEAKEL 518
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ ++ + +LI K+G A ++L + P+V+ YT +++S + +A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN---IDPDAYTFNILV 280
++ M S P+ TY ++ F + KEA E+ + ++ + + PD +++++
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 281 DGLCKEGKVKGAKNVLGVMMIYG-----------FCIVGQLKEATELLDEMVTKNIDPDA 329
K G + A+ V M+ G KE +++ D+M +I PD
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 321
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++++L+ + + + A +V M+ GV+P YN L+D + V +AK +
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 21/352 (5%)
Query: 31 LTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGY 90
+ S V++ + AI L + ES G+ + + + L+ C C + A SV KKG
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGN 250
Query: 91 QP-DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
P D+ ++ +I G +V+ + ++V GF D +SYS L R +
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR----TGRI 306
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
+++ D++ +G D Y+ +I +++ R++ + +P++ Y+ +
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+ L K + V+DA ++ EM+S+ +LP T+ + C G A + +
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATE 315
+ +L+ L + GK NV M ++ G CI+G L+ A
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
+++E + K P+ + +S L L K + A + + K N ++
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 155/369 (42%), Gaps = 29/369 (7%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
T + + IL +L + K + + + M G+ ++ +I ++ + + + A
Sbjct: 148 TKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
+ + G + T +F L++ LC + V A + D SY+I+ +S
Sbjct: 208 LFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWS 266
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ V+ + ++V GF D +SYS LI GL + G+ ++++ I+ K
Sbjct: 267 K----LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
PD +Y +I + + ++ Y M+ + PN+ TY+ L+ G ++ +A E+
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA-------------------KNVLGVMMI 301
+EM+++ + P + LC G A K +L +
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+G C G L + DEM D + +VDGLC G ++ A V+ M++G
Sbjct: 443 FGKC--GML---LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497
Query: 362 PNVVTYNSL 370
PN Y+ L
Sbjct: 498 PNRFVYSRL 506
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 138/344 (40%), Gaps = 19/344 (5%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
G+ ++ + S+++ F VL ++ +G PD T + V+RA
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 114 LQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSI 173
++ ++ + G + S++ L R + A + + D SY+I
Sbjct: 206 IELFEESESFGVKCSTESFNALL-----RCLCERSHVSAAKSVFNAKKGNIPFDSCSYNI 260
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
+I+G K+G+ + ++L+++ PD + Y+ +I+ L + + D+ ++ + K
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
+P+ Y A+I F E+ M+ + +P+ T++ LV GL K KV A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 294 NVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+ M+ G C G A + + + +L+ L
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
+ GK NV M + G +V Y ++DG C++ + A
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 139/324 (42%), Gaps = 40/324 (12%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
++R A+ +F S F +L L + H A S+ + I + + +
Sbjct: 201 YVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSV-FNAKKGNIPFDSCSYN 259
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
I+I+ + LG++ VL ++++ G+ PD ++++ LI+GL ++ +++ D++ +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G D Y+ + F IS +++++ ++ + + +YS L++GL K +
Sbjct: 320 GNVPDANVYNAMICNF----ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD------------------KLVTDAF-- 223
AL++ ++ + V P + T+ + LC ++ A+
Sbjct: 376 VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL 435
Query: 224 ---------------NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
N++ EM +V Y ++ G CI+G L+ A +++E + K
Sbjct: 436 LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Query: 269 IDPDAYTFNILVDGLCKEGKVKGA 292
P+ + ++ L L K + A
Sbjct: 496 FCPNRFVYSRLSSKLMASNKTELA 519
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 96/234 (41%), Gaps = 4/234 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
+V IF+ + P + ++ + + + + ++ +M N+ T S L++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
++ A + ++L +G P T T+ +K LC A+ + G R+
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
+ +Y +L + SR L D++ G+ D Y +++GLC +G + A
Sbjct: 429 SESAYKLLLKRLSR----FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ ++ + K P+ +Y+ + L A+ L+ ++ R N ++
Sbjct: 485 VLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G +D +ILI GLC+ G + ALQLL + + +P+V+ ++ +I C +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
F L M +RI P+ T+ LI G G+++E +LL+ M K +P+ T+ ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
L + +N+ EA E++ +M++ + P ++ +V GLC+
Sbjct: 317 L-----LDKKRNL----------------EAKEMMSQMISWGMRPSFLSYKKMVLGLCET 355
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
V VL M+ G P + + ++ C+VS+ N
Sbjct: 356 KSVVEMDWVLRQMVNHGFVPKTLMWWKVV--QCVVSKNN 392
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++ ALQ D+ Q R + +++S LI G C G+ + A +LL ++E + ++PD + +
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I L K V + +L M K PN TY ++YG + EA E++ +M++
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
+ P ++ +V GLC+ V VL M+ +GF
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 39/250 (15%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS F IL LV K + + G+ + +ILI C G + A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L + ++ +P+ +TF+ LI+G C + + A + L + +
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK-------------------LLERMEK 265
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
I P D ++++ILI+GL K G+ + + LL +++ K +P
Sbjct: 266 ERIEP--------------------DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEP 305
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+ Y ++ L K +A + S+M+S + P+ +Y ++ G C + E +L
Sbjct: 306 NPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL 365
Query: 262 DEMVTKNIDP 271
+MV P
Sbjct: 366 RQMVNHGFVP 375
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++ L + + A+ L + N++T S LI +C+ G+ AF +L ++ K+
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS--ILTLKFSRRVISPT 147
+PDTITF LI GL +V+ + + + +G + +Y + L +R +
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE-- 325
Query: 148 PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
A + +++ G R +SY ++ GLC+ +LR++ P +M+
Sbjct: 326 ----AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWW 381
Query: 208 TII 210
++
Sbjct: 382 KVV 384
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L L+ +FN + ++ + IL+S K+ + AI L +ME G+ ++VT +
Sbjct: 140 LELSRKVFNSM----KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L++ Y G A +VL ++ G +P T + ++L++ + ++ H ++
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 125 FRLDQVSYSILT--------LKFSRRVISPTPVQRALQFHDDVVA--------------- 161
D + L L ++R V + + ++ V
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 162 ----QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
+G + D ++++ L +G +G+ + AL ++ K++ K V P+VV +T I K+
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+A ++ +M + + PN T + L+ + L E+ + KN+ DAY
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 278 ILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDP 327
LVD K G ++ A + + M+ G+ + G+ +E M+ ++P
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 328 DAYTFSILV-----DGLCKEG 343
DA TF+ ++ GL +EG
Sbjct: 496 DAITFTSVLSVCKNSGLVQEG 516
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
S++ +++ K+G A+ LL ++E ++PD+V + +++ L DA + M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ P+ + ++L+ G LK + ++ + D Y L+D K G +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 290 KGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
A+ V +M ++ G LK+A L+ M + I PDA T++ L G
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
GK + A +V+G M ++GV PNVV++ ++ G
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 18/237 (7%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
RL S + N L M L+L RK+ + ++ + +I+ S K V DA
Sbjct: 116 LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
L EM + P++ T+ +L+ G+ G K+A +L M + P + + L+ +
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 284 CKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDA 329
+ G +K K + G + +I + G L A + D M KNI
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI---- 291
Query: 330 YTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ LV GL +K A+ ++ M K+G+KP+ +T+NSL G+ + + KA D+
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 72/344 (20%)
Query: 32 TSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQ 91
SL+ M + LS ++ +S N+ + + +++ Y LG + A +L ++ G +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 92 PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQR 151
PD +T+ +L+ G ++G D ++ V +
Sbjct: 188 PDIVTWNSLLSG----------------YASKGLSKDAIA-----------------VLK 214
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP----DVVMYT 207
+Q G + S S L+ + + G L+L + I G +++ DV + T
Sbjct: 215 RMQI------AGLKPSTSSISSLLQAVAEPGH----LKLGKAIHGYILRNQLWYDVYVET 264
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
T+ID K + A ++ M +K N+ + +L+ G LK+A L+ M +
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
I PDA T+N L G GK + A +V +G++KE K + P
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDV-----------IGKMKE----------KGVAP 359
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ +++ + G K G + A V M ++GV PN T ++L+
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 145/363 (39%), Gaps = 58/363 (15%)
Query: 28 GKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
K++ L K Y A+ +ME S G+ ++ + + L++ I A V K+
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+PD TF LI G C +A +F D
Sbjct: 267 D-TIKPDARTFNILIHGFC------KARKFDD---------------------------- 291
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
RA+ D + F D V+Y+ + CK G + ++L ++ P+VV Y
Sbjct: 292 ---ARAMM--DLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T ++ SL K K V +A +Y +M +P+ Y++LI+ G+ K+A E+ ++M
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------------MIYGFCIVGQLKEAT 314
+ + D +N ++ + + A +L M Y + +
Sbjct: 407 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 466
Query: 315 E-----LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
LL MV ++ D T+ +L+ GLC GKV+ A +++G+ P T
Sbjct: 467 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKM 526
Query: 370 LMD 372
L+D
Sbjct: 527 LVD 529
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 13/277 (4%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P F ++ K + + A ++ M+ + ++VT + + YC G +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L ++ + G P+ +T+T ++ L + QV AL ++ + G D YS L
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI----- 385
Query: 142 RVISPT-PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE---GK 197
++S T + A + +D+ QG R D + Y+ +I+ + + AL+LL+++E G+
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
P+V Y ++ C K + L MV + +V TY LI G C+ G+++EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCK----EGKVK 290
+E V K + P T +LVD L K E K+K
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLK 542
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMV--SKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
Y ++D L K + + L +EM + L + T + ++ G+ +A + E
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228
Query: 264 MV-TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVT 322
M + + D N L+D L KE ++ A V +L D
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-----------------LKLFD---- 267
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
I PDA TF+IL+ G CK K A+ ++ +M P+VVTY S ++ +C
Sbjct: 268 -TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
L+ EM + ++ N TYT LI G G A E+ EMV+ + PD T+NIL+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
CK GK++ A + G++++ +L + K + P+ T++ ++ G CK+G
Sbjct: 62 CKNGKLEKA------------LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG 109
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+ A + M + G P+ TYN+L+ H
Sbjct: 110 FKEEAYTLFRKMKEDGPLPDSGTYNTLIRAH 140
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
++ ++ +G + V+Y+ LI GL + G A ++ +++ V PD++ Y ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 213 LCKD-KL--------VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
LCK+ KL V D ++L+ + K + PNV TYT +I GFC G +EA L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTK 323
M PD+ T+N L+ ++G K A + EL+ EM +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD-KAA--------------------SAELIKEMRSC 159
Query: 324 NIDPDAYTFSILVD 337
DA T+ ++ D
Sbjct: 160 RFAGDASTYGLVTD 173
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG---------KLVQPD 202
A + ++V+ G D ++Y+IL++GLCK G+ + AL + +G K V+P+
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
VV YTT+I CK +A+ L+ +M LP+ TY LI G + EL+
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 263 EMVTKNIDPDAYTFNILVD 281
EM + DA T+ ++ D
Sbjct: 155 EMRSCRFAGDASTYGLVTD 173
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 30/198 (15%)
Query: 44 ISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKG 103
+ L +M G++ N VT + LI G A + +++ G PD +T+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 104 LCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQG 163
LC N ++++AL V G+ L + L+LK G
Sbjct: 61 LCKNGKLEKALVAGK--VEDGWDL----FCSLSLK------------------------G 90
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
+ + V+Y+ +I+G CK G + A L RK++ PD Y T+I + +D +
Sbjct: 91 VKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 150
Query: 224 NLYSEMVSKRILPNVFTY 241
L EM S R + TY
Sbjct: 151 ELIKEMRSCRFAGDASTY 168
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK---------VKGAKN 350
+I G G A E+ EMV+ + PD T++IL+DGLCK GK V+ +
Sbjct: 22 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWD 81
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHC 375
+ + +GVKPNVVTY +++ G C
Sbjct: 82 LFCSLSLKGVKPNVVTYTTMISGFC 106
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
+I K G A++L + L Q V +Y +++ +LC K+ A+ L M+
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
K + P+ TY L+ G+C G++KEA E LDEM + +P A ++L++GL G ++
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
AK ++ M GF PD TF+IL++ + K G+V+ +
Sbjct: 271 AKEMVSKMTKGGFV---------------------PDIQTFNILIEAISKSGEVEFCIEM 309
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
K G+ ++ TY +L+ + ++++A
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 21/350 (6%)
Query: 12 FNRLLRTHP--TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCY 69
F R++P TP+ +E+ ++ SL K Y + + QM+ + + T +I Y
Sbjct: 97 FFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQY 156
Query: 70 CHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
G + A + + K G Q + +L+ LC A ++ +G + D
Sbjct: 157 GKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD 216
Query: 129 QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPAL 188
+ +Y+IL + S ++ A +F D++ +GF +LI GL G + A
Sbjct: 217 KRTYAILVNGW----CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 189 QLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+++ K+ PD+ + +I+++ K V +Y + ++ TY LI
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM-------- 300
+G++ EA LL+ V P + ++ G+C+ G A + M
Sbjct: 333 SKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNR 392
Query: 301 -IYGFCIV-----GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
+Y I G+ +A L EM + P + F ++ DGL GK
Sbjct: 393 PVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV------ 289
P Y L + + ++L +M ++D T +++ K G V
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 290 -KGAKNVLGVM--------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
G LG +++ C V A L+ M+ K + PD T++ILV+G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
GK+K A+ L M ++G P + L++G + AK++
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 189 QLLRKIEGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+L ++ GKL ++PD+V Y T+I +LC+ + +A L E+ +K + P++ T+ L+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
+ GQ + E+ +MV KN+ D T+N + GL E K K N+ G +
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
MI G G++ EA E+V PD TF++L+ +CK G + A
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESA 339
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILINCYCHLGQIPFAFSV 81
S++ F +L++ K + L +++ I ++V+ + LI C +P A ++
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L +I KG +PD +TF TL+ L Q + + +V + +D +Y+ L +
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
S + + ++ A G + D S++ +I G G+ A ++I +P
Sbjct: 263 EAKS----KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP 318
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D + ++ ++CK A L+ E SKR L T L+ + +EA E++
Sbjct: 319 DKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 26/291 (8%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ- 123
+I+ Y G A V ++ + + ++F L+ L+ + + +++ +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
+ D VSY+ L + P A+ D++ +G + D V+++ L+ GQ
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLP----EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
+ ++ K+ K V D+ Y + L + + NL+ E+ + + P+VF++ A
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
+I G G++ EA E+V PD TF +L+ +CK
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCK------------------ 332
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
G + A EL E +K T LVD L K K + A+ ++ +
Sbjct: 333 ---AGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 178/414 (42%), Gaps = 67/414 (16%)
Query: 23 SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVL 82
++ + ++++ K + + +A+SL +M +SG N T S ++ L I + V
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 83 AKILKKGYQ-------------------------------PDTITFTTLIKGLCLNAQVQ 111
++K G++ DTI++T +I L + +
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 112 RALQFHDDVVAQGFRLDQVSY-------SILTLKFSRRVISPTPVQRALQFHDDVVAQGF 164
ALQF+ ++V G ++ ++ S L L+F + + H +++ +G
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTI------------HSNIIVRGI 255
Query: 165 RLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFN 224
L+ V + L++ + + + A+++L + DV ++T+++ ++ +A
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG----EQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 225 LYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL- 283
+ EM S + PN FTY+A++ V L ++ + + + N LVD
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 284 -CKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
C +V+ ++ V G M +I G G +++ LL EMV + ++P+ T
Sbjct: 372 KCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
S ++ K V+ + ++++ V +V NSL+D + +V+ A ++
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 157/373 (42%), Gaps = 38/373 (10%)
Query: 25 IEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAK 84
+EFGK + S + ++ GI N+V + L++ Y ++ A +
Sbjct: 240 LEFGKTIHSNIIVR---------------GIPLNVVLKTSLVDFYSQFSKMEDA----VR 280
Query: 85 ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVI 144
+L + D +T+++ G N + + A+ ++ + G + + +YS ++
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA--------IL 332
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL-LRKIEGKLVQPDV 203
S R+L F + +Q ++ + + N L M A ++ ++ G +V P+V
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 204 VMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDE 263
V +TT+I L V D F L EMV + + PNV T + ++ + ++ E+
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 264 MVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEA 313
++ +++D + N LVD KV A NV+ M ++ F +G+ + A
Sbjct: 453 LLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+++ M I D + + G ++ K++ +K G NSL+D
Sbjct: 513 LSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDM 572
Query: 374 HCLVSEVNKAKDI 386
+ + AK +
Sbjct: 573 YSKCGSLEDAKKV 585
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
G++ N+ + L++ Y I A K+ + +T +I + + A
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNA----RKLFDEMSHRTVFAWTVMISAFTKSQEFASA 108
Query: 114 LQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSI 173
L ++++A G ++ ++S + R + + H V+ GF + V S
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVV----RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
L + K GQ K A +L ++ D + +T +I SL + +A YSEMV
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
+ PN FT+ L+ +G L+ + ++ + I + LVD + K++ A
Sbjct: 221 VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 294 NVLG----------VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
VL ++ GF + KEA EM + + P+ +T+S ++ LC
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LCSAV 338
Query: 344 K-VKGAKNVLGVMMKQGVKPNVVTYNSLMDGH--CLVSEVNKAK 384
+ + K + +K G + + N+L+D + C SEV ++
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 155/363 (42%), Gaps = 43/363 (11%)
Query: 13 NRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHL 72
+R+ +P+++ + ++ LV L +M + N+VT S ++ L
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 73 GQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY 132
+ + A +L++ + + +L+ + +V A +V+ R D ++Y
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW----NVIRSMKRRDNITY 496
Query: 133 SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR 192
+ L +F+ + AL + + G R+DQ+S I+ +G AL+ +
Sbjct: 497 TSLVTRFNE----LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG----ALETGK 548
Query: 193 KIEGKLVQPDVVMYTTIIDSL----CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGF 248
+ V+ ++++SL K + DA ++ E+ + P+V ++ L+ G
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGL 604
Query: 249 CIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG 308
G + A +EM K +PD+ TF IL+ C G++ LG+
Sbjct: 605 ASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTD----LGL---------- 649
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
E +++ ++ NI+P + LV L + G+++ A V+ M +KPN + +
Sbjct: 650 ---EYFQVMKKIY--NIEPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIFK 701
Query: 369 SLM 371
+L+
Sbjct: 702 TLL 704
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 58/335 (17%)
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDDV 120
S+ +I Y Q P +F++ + K+ + PD TFTTL K L+ V + LQ H +
Sbjct: 45 SNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQI 104
Query: 121 VAQGFRLDQ-VSYSILTL--KF-----SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
GF D VS ++ + KF +R P + +VS++
Sbjct: 105 WRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR----------------SEVSWT 148
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
LI+G + G+ A +L ++ DVV+Y ++D K +T A L+ EM K
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
V T+T +I+G+C + + A +L D M +N+ ++N
Sbjct: 206 ----TVITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNT-------------- 243
Query: 293 KNVLGVMMIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
MI G+C Q +E L EM T ++DPD T ++ + G + +
Sbjct: 244 -------MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ ++ + V +++D + E+ KAK I
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 35/338 (10%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGY-QPDTITFTTLIKGLCLNAQVQRALQF 116
N+ + LI Y +G AFS+ ++ G +PDT T+ LIK + A V+
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 117 HDDVVAQGF-RLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
H V+ GF L V S+L L + V A + D + + D V+++ +I
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHL-----YANCGDVASAYKVFDKMPEK----DLVAWNSVI 194
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
NG + G+ + AL L ++ K ++PD +++ + K +T ++ M+ +
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
N+ + L+ + G+++EA L DEMV KN + ++ L+ GL G K A +
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN----SVSWTSLIVGLAVNGFGKEAIEL 310
Query: 296 LGVM---------------MIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFSILVDGL 339
M ++Y G +KE E M + I+P F +VD L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
+ G+VK A + M Q PNVV + +L+ G C V
Sbjct: 371 ARAGQVKKAYEYIKSMPMQ---PNVVIWRTLL-GACTV 404
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 12/215 (5%)
Query: 184 TKPALQLLRKIEGKLVQP-DVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTY 241
+ P + K+ K+ +P +V ++ T+I + AF+LY EM VS + P+ TY
Sbjct: 65 SPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTY 124
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
LI + ++ + ++ Y N L+ G V A V M
Sbjct: 125 PFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE 184
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+I GF G+ +EA L EM +K I PD +T L+ K G + K V
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M+K G+ N+ + N L+D + V +AK +
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 154/363 (42%), Gaps = 22/363 (6%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
+F+ + + P + ++TS K + +A+S +ME + ++V S LI
Sbjct: 177 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 236
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
L A S+ +++ + G PD + + ++I + A ++ G + V
Sbjct: 237 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 131 SYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL 190
SYS L + + AL ++ LD + +I+I+ ++ K A +L
Sbjct: 297 SYSTLLSVY----VENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 191 LRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCI 250
+ ++P+VV Y TI+ + +L +A +L+ M K I NV TY +I +
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 251 VGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA--------------KNVL 296
+ ++AT L+ EM ++ I+P+A T++ ++ K GK+ A VL
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 297 GVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
MI + VG + A LL E+ PD + L K G+ + A V
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 357 KQG 359
+ G
Sbjct: 529 ESG 531
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 31/369 (8%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
TPS+ + +L ++++ K + A L +M + + T S LI + G A S
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 81 VLAKILKKGYQPDTITFTTLI---KGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL 137
L K+ + D + ++ LI + LC +A+ + G D V+Y+ +
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 138 KFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGK 197
+ + + + A ++ G + VSYS L++ + + AL + +++
Sbjct: 269 VYGKAKL----FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 198 LVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
D+ +ID + +V +A L+ + I PNV +Y ++ + EA
Sbjct: 325 NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEA 384
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELL 317
L M K+I+ + T+N ++ IYG + + ++AT L+
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIK-------------------IYGKTM--EHEKATNLV 423
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLV 377
EM ++ I+P+A T+S ++ K GK+ A + + GV+ + V Y +++ + V
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 378 SEVNKAKDI 386
+ AK +
Sbjct: 484 GLMGHAKRL 492
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 171/391 (43%), Gaps = 49/391 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ IF+RL R+ TP ++ + ++ K K + A L +M +G++ N V+ S L++
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y + A SV A++ + D T +I + Q+ D+V +
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID---VYGQL--------DMVKEA--- 349
Query: 128 DQVSYSILTLKFSRRVISPTPVQR----ALQFHDDVVAQGFRLDQ--------VSYSILI 175
D++ +S+ + V+S + R A F + + FRL Q V+Y+ +I
Sbjct: 350 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI--HLFRLMQRKDIEQNVVTYNTMI 407
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
K + + A L+++++ + ++P+ + Y+TII K + A L+ ++ S +
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
+ Y +I + VG + A LL E+ PD + L K G+ + A V
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWV 523
Query: 296 LGV---------MMIYGFCIVG------QLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
+ ++G C++ + E+ ++M T PD+ +++++
Sbjct: 524 FRQAFESGEVKDISVFG-CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 582
Query: 341 KEGKVKGAKNVLGVMMKQG-VKPNVVTYNSL 370
K+ + + A V M ++G V P+ V + L
Sbjct: 583 KQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 28/208 (13%)
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
Q+S +++ L + + +L LL + E P V Y ++ ++ + K A L+
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLF 178
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD---GL 283
EM + + P+ +TY+ LI F G A L +M + D ++ L++ L
Sbjct: 179 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRL 238
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
C K I +LK + I PD ++ +++ K
Sbjct: 239 CDYSK--------------AISIFSRLKRS----------GITPDLVAYNSMINVYGKAK 274
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ A+ ++ M + GV PN V+Y++L+
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLL 302
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 24/172 (13%)
Query: 164 FRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAF 223
F+ D +++IL++G + + + ++ GK ++PDVV Y ++ID CKD+ + A+
Sbjct: 210 FQPDLQTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAY 266
Query: 224 NLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGL 283
L +M + P+V TYT +I G ++GQ +A E+L EM PD +N
Sbjct: 267 KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNA----- 321
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
I FCI +L +A +L+DEMV K + P+A T+++
Sbjct: 322 ----------------AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 24/293 (8%)
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRA 152
DT F L++ LC + A + + Q F+ D +++IL + + +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEE- 236
Query: 153 LQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
+ +G + D V+Y+ LI+ CK + + A +L+ K+ + PDV+ YTT+I
Sbjct: 237 ------MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGG 290
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
L A + EM P+V Y A I FCI +L +A +L+DEMV K + P+
Sbjct: 291 LGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVG---------------QLKEATELL 317
A T+N+ L + G L V M+ C+ ++ A L
Sbjct: 351 ATTYNLFFRVLSLANDL-GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLW 409
Query: 318 DEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
++MV K + +L+D LC KV+ A+ L M+++G +P+ V++ +
Sbjct: 410 EDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
LC + QT + +++ D + ++ +LC++K +TDA N+Y + + P+
Sbjct: 157 LCSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPD 213
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
+ T+ L+ G+ +EA +EM K + PD T+N L+D CK+ +++ A ++
Sbjct: 214 LQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLID 270
Query: 298 VM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
M +I G ++GQ +A E+L EM PD ++ + C
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIAR 330
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ A ++ M+K+G+ PN TYN L +++ ++ ++
Sbjct: 331 RLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWEL 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVIS 145
LK +QPD TF L+ G + A F +++ +G + D V+Y+ L + +
Sbjct: 206 LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK---- 258
Query: 146 PTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVM 205
+++A + D + + D ++Y+ +I GL +GQ A ++L++++ PDV
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 206 YTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
Y I + C + + DA L EMV K + PN TY + L + EL M+
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLK 311
P+ + L+ + KV A + M++ GF C + +++
Sbjct: 379 GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVE 438
Query: 312 EATELLDEMVTKNIDPDAYTF 332
EA + L EMV K P +F
Sbjct: 439 EAEKCLLEMVEKGHRPSNVSF 459
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 8/229 (3%)
Query: 50 MESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQ 109
M+ G+ ++VT + LI+ YC +I A+ ++ K+ ++ PD IT+TT+I GL L Q
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKF--SRRVISPTPVQRALQFHDDVVAQGFRLD 167
+A + ++ G D +Y+ F +RR+ A + D++V +G +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD------ADKLVDEMVKKGLSPN 350
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
+Y++ L + +L ++ G P+ +I + + V A L+
Sbjct: 351 ATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWE 410
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 276
+MV K L+ C + +++EA + L EMV K P +F
Sbjct: 411 DMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 157/376 (41%), Gaps = 21/376 (5%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F + + P +++ + Y S+ ++ I S S L+
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
Y G P A+ V + +K D + + +LI GLC N + + AL+ D+ L
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
S I+T + ++ LQ H ++ G L+ S LI+ K G + A
Sbjct: 473 KPDS-DIMT-SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
L++ + ++V + ++I ++ L + +L++ M+S+ I P+ + T+++
Sbjct: 531 LKVFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-------- 299
L + L + I D + N L+D K G K A+N+ M
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITW 646
Query: 300 --MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK 357
MIYG+ G A L DEM PD TF L+ G V+ KN+ M +
Sbjct: 647 NLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Query: 358 Q-GVKPNVVTYNSLMD 372
G++PN+ Y +++D
Sbjct: 707 DYGIEPNMEHYANMVD 722
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G D V+Y+ +I LC+ G L + ++E +PD++ + T+++ + +L +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
++ M SK + PN+ +Y + + G + +A L+D M T+ I PD +T+N L
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL--- 304
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
I + + L+E + +EM K + PD T+ +L+ LCK+
Sbjct: 305 ------------------ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Query: 343 GKVKGAKNVLGVMMKQGV--KPNV 364
G + A V +K + +PN+
Sbjct: 347 GDLDRAVEVSEEAIKHKLLSRPNM 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
L++ Y + ++ A ++ +K G PD +T+ T+IK LC + L +++
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
GF D +S++ L +F RR + + D + ++ + SY+ + GL + +
Sbjct: 223 GFEPDLISFNTLLEEFYRREL----FVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
AL L+ ++ + + PDV Y +I + D + + Y+EM K + P+ TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
LI C G L A E+ +E + + + +V+ L GK+ A
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKL-VQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
S++ L++ + A++ +++ KL + PD+V Y T+I +LC+ + D +++ E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+ P++ ++ L+ F E + D M +KN+ P+ ++N V GL + K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 289 VKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
A N L+D M T+ I PD +T++ L+ + ++
Sbjct: 279 FTDALN---------------------LIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 349 KNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
M ++G+ P+ VTY L+ C ++++A ++
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 110 VQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFH---DDVVAQGFRL 166
Q+ +F ++ FR YS + R + + LQ+ DD+ ++ F
Sbjct: 68 TQKVEKFKRSCESESFRQVHGLYSAFIRRL-REAKKFSTIDEVLQYQKKFDDIKSEDF-- 124
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
V +L+ G M + A +L ++ + V + ++ + K + +A +
Sbjct: 125 --VIRIMLLYGYSGMAEH--AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 227 SEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
E+ K I P++ TY +I C G + + + +E+ +PD +FN L++
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE--- 237
Query: 286 EGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
F E + D M +KN+ P+ +++ V GL + K
Sbjct: 238 ------------------FYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
A N++ VM +G+ P+V TYN+L+ +
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAY 308
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 38/347 (10%)
Query: 47 SHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV-------LAKILKKGY-QPDTITFT 98
S Q E I + M+ + ++ + Y + F S A+I+ G+ +PDT +
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 99 TLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDD 158
+I+G + + +R+L + ++ + ++ L S + + + Q H
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS----NLSAFEETTQIHAQ 140
Query: 159 VVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
+ G+ D + + LIN G K A L +I +PD V + ++I K
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVKAGK 196
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
+ A L+ +M K N ++T +I G+ KEA +L EM +++PD +
Sbjct: 197 MDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 279 LVDGLCKEGKVKGAK--------------NVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+ + G ++ K +VLG ++I + G+++EA E+ + K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ ++ L+ G G + A + M K G+KPNV+T+ +++
Sbjct: 313 VQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 139/372 (37%), Gaps = 42/372 (11%)
Query: 2 SSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT 61
S FL A +F+ R P + ++ ++ L +M S N T
Sbjct: 62 SDFLPYAQIVFDGFDR----PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYT 117
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
L+ +L + A+I K GY+ D +LI + + A D +
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
D VS++ + + + + AL + + + +S++ +I+G +
Sbjct: 178 EP----DDVSWNSVIKGY----VKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQA 225
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
K ALQL +++ V+PD V + + + + ++S + RI +
Sbjct: 226 DMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG 285
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
LI + G+++EA E+ + K++ A+T +I
Sbjct: 286 CVLIDMYAKCGEMEEALEVFKNIKKKSV--QAWT-----------------------ALI 320
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GV 360
G+ G +EA EM I P+ TF+ ++ G V+ K + M + +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 361 KPNVVTYNSLMD 372
KP + Y ++D
Sbjct: 381 KPTIEHYGCIVD 392
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 21/283 (7%)
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGF-RLDQVSYSI 173
Q H ++ G L Q SY+I KF IS T + +V GF R D +++
Sbjct: 32 QIHARMLKTG--LMQDSYAIT--KFLSFCISSTSSD--FLPYAQIVFDGFDRPDTFLWNL 85
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
+I G + + +L L +++ + + +++ + + +++++
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA- 292
+V+ +LI + + G K A L D + +PD ++N ++ G K GK+ A
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 293 --------KNVLG-VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
KN + MI G+ KEA +L EM +++PD + + + + G
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ K + + K ++ + V L+D + E+ +A ++
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPD--VVMYTTIIDSLCKDKLVTDAFNLYS 227
S SIL+ + K G + L+ K+E ++ + V + ++ + C ++ + +A +++
Sbjct: 141 SMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELL-DEMVTKNIDPDAYTFNILVDGLCKE 286
++ S R P+V T L+ GF G + ATEL EMV + P++ T+ I +DG CK+
Sbjct: 201 KLHS-RFNPDVKTMNILLLGFKEAGDVT-ATELFYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 287 GKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
A + M +I+G + +A +L DE+ + + PD +
Sbjct: 259 RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAY 318
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
+ L+ L K G V GA V+ M ++G++P+ VT++S+ G
Sbjct: 319 NALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 28/343 (8%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILINCYCHLGQIPFAFSVLAK- 84
F K L L +M+++ A +L ++ + + + SIL+ G K
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 85 ---ILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
I +K + D F L++ C +++ A + + ++ F D + +IL L F
Sbjct: 166 EKEIFRKKFGVDE--FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFK- 221
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
V F+ ++V +GF+ + V+Y I I+G CK AL+L ++
Sbjct: 222 ---EAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDI 278
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
V + TT+I + A L+ E+ + + P+ Y AL+ G + A +++
Sbjct: 279 TVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVM 338
Query: 262 DEMVTKNIDPDAYTFNIL-----------VDGLCKEGKVKGAKNVLG-----VMMIYGFC 305
EM K I+PD+ TF+ + +G+C+ + ++++ VM++ FC
Sbjct: 339 KEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFC 398
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
G++ +L M+ K P + +L LC + A
Sbjct: 399 HNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
L + + A+ L +E+ ++ PN+ ++ ++ C + + E L+ V ++ +
Sbjct: 113 LARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV--KMEKE 168
Query: 273 AYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
+ VD N+L + FC ++KEA + +++ ++ +PD T
Sbjct: 169 IFRKKFGVDEF----------NIL----LRAFCTEREMKEARSIFEKLHSR-FNPDVKTM 213
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHC 375
+IL+ G + G V + M+K+G KPN VTY +DG C
Sbjct: 214 NILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFC 256
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 149/338 (44%), Gaps = 62/338 (18%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQV-QRALQFHDDVV 121
S LI Y A + ++ K G ++F L+ CL++ + +R Q D+
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AACLHSDLFERVPQLFDE-- 162
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
F +R + TP D++SY +LI C
Sbjct: 163 -----------------FPQRYNNITP------------------DKISYGMLIKSYCDS 187
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI-LPNVFT 240
G+ + A++++R +E K V+ ++ +TTI+ SL K+ LV +A +L+ EMV+K L N
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNT-- 245
Query: 241 YTALIYGFCIVGQLKEA----TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL 296
+Y ++ KE+ EL++EM + + PD ++N L+ C +G + AK V
Sbjct: 246 ----VYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Query: 297 GVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
+ +I+ CI G + + + + PD T L +GL K +++
Sbjct: 302 EGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 347 GAKNVLGVMMKQGVKPNVVT-YNSLMDGHCLVSEVNKA 383
A+ V + +K+ P +VT + L + L S+ N A
Sbjct: 362 DARGVARI-VKKKFPPRLVTEWKKLEEKLGLYSKGNAA 398
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT-ELLDEMV 265
+T+I S + + A ++ EM V ++ AL+ C+ L E +L DE
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDEFP 164
Query: 266 TK--NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV--------------GQ 309
+ NI PD ++ +L+ C GK + A ++ M + G + G
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224
Query: 310 LKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS 369
+ EA L EMV K D D +++ + KE + K ++ M G+KP+ V+YN
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPER-VKELMEEMSSVGLKPDTVSYNY 283
Query: 370 LMDGHCLVSEVNKAKDI 386
LM +C+ +++AK +
Sbjct: 284 LMTAYCVKGMMSEAKKV 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 53 SGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQR 112
+ I + ++ +LI YC G+ A ++ + KG + I FTT++ L N V
Sbjct: 168 NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDE 227
Query: 113 ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
A ++V +G LD Y++ + ++ SP +R + +++ + G + D VSY+
Sbjct: 228 AESLWIEMVNKGCDLDNTVYNVRLMNAAKE--SP---ERVKELMEEMSSVGLKPDTVSYN 282
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
L+ C G A +K+ L QP+ + T+I LC + L ++ +
Sbjct: 283 YLMTAYCVKGMMSEA----KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIV 338
Query: 233 RILPNVFTYTALIYGFCIVGQLKEA 257
+P+ T L G ++++A
Sbjct: 339 HKIPDFKTCKHLTEGLVKNNRMEDA 363
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 11 IFNRLLRT------HPTP-SIIEFGKILTSLVKMKHYPTAISLSHQMES--SGIISNMVT 61
+FN +RT + TP S + F +L + + K++ L ++ + II + ++
Sbjct: 117 MFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKIS 176
Query: 62 SSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
ILI YC G A ++ ++ KG + TI FTT++ L +++ A +++V
Sbjct: 177 YGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMV 236
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
+G LD +Y++ + + SP +R + +++ + G + D +SY+ L+ C+
Sbjct: 237 KKGCELDNAAYNVRIMSAQKE--SP---ERVKELIEEMSSMGLKPDTISYNYLMTAYCER 291
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G A ++ +EG P+ + T+I LC +L + ++ + V +P+ T
Sbjct: 292 GMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTL 351
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDP 271
L+ G + +A L+ V K P
Sbjct: 352 KHLVVGLVENKKRDDAKGLI-RTVKKKFPP 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D++SY ILI C G + A++++R+++GK ++ + +TTI+ SL K + A NL+
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 227 SEMVSKRI-LPNVFTYTALIYGFCIVGQLKEA----TELLDEMVTKNIDPDAYTFNILVD 281
+EMV K L N Y I+ KE+ EL++EM + + PD ++N L+
Sbjct: 233 NEMVKKGCELDNA------AYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 282 GLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDP 327
C+ G + AK V + +I+ C ++ + + V + P
Sbjct: 287 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 346
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
D T LV GL + K AK ++ + K+
Sbjct: 347 DFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
YS LI + A++ +++ V + ++++ K L+ E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 231 SK--RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+ +I+P+ +Y LI +C G ++A E++ +M K ++ F ++ L K+G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 289 VKGAKNVLGVMM---------IYGFCIVGQLKEA----TELLDEMVTKNIDPDAYTFSIL 335
++ A N+ M+ Y I+ KE+ EL++EM + + PD +++ L
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYL 284
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ C+ G + AK V + PN T+ +L+
Sbjct: 285 MTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 192 RKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV 251
RK+ V +VVM+TT+I K + +AF+L+ +M+ + ILPN T A++ +
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MI 301
G L+ + M+ I+ DA F +D + G ++ A+ V +M MI
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 302 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK-GAKNVLGVMMKQGV 360
F I G +EA + +M ++N+ P++ TF L+ G VK G K + GV
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAK 384
P Y ++D E+ +AK
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAK 469
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHD---DVVAQGFRLDQVSYSILTLKFS 140
K+ + + + +TTLI G A+ +RA++ D ++ + +Q + + + + S
Sbjct: 267 KLFETSVDRNVVMWTTLISGF---AKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
S ++ H ++ G +D V+++ I+ + G +Q+ R + + +
Sbjct: 324 ----SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN----IQMARTVFDMMPE 375
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+V+ ++++I++ + L +A + + +M S+ ++PN T+ +L+ G +KE +
Sbjct: 376 RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQ 435
Query: 261 LDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+ M + P+ + +VD L + G++ AK+ + M
Sbjct: 436 FESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
LI LCK+G+ A RK+ L + DVV +T +I K + +A L+ + S++
Sbjct: 52 LIGELCKVGKIAEA----RKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
NV T+TA++ G+ QL A L EM +N+ ++N ++DG + G++ A
Sbjct: 108 ---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKAL 160
Query: 294 NVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
+ M M+ G++ EA L + M + D +++ +VDGL K G
Sbjct: 161 ELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNG 216
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
KV A+ + M ++ N++++N+++ G+ + +++A
Sbjct: 217 KVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEA 252
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 113/227 (49%), Gaps = 29/227 (12%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D V+++ +I G K+G + A +L +++ + +VV +T ++ + K ++ A L+
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
EM + NV ++ +I G+ G++ +A EL DEM +NI ++N +V L +
Sbjct: 133 QEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQR 184
Query: 287 GKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
G++ A N+ M M+ G G++ EA L D M +NI +++ ++
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMI 240
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
G + ++ A + VM ++ + ++N+++ G E+NKA
Sbjct: 241 TGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKA 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 164/365 (44%), Gaps = 57/365 (15%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A +F+R+ +++ + +++ ++ K A L +M N+V+ +
Sbjct: 93 MREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNT 145
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+I+ Y G+I A + ++ ++ + +++ +++K L ++ A+ + +
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP--- 198
Query: 125 FRLDQVSYSILT--------LKFSRRVISPTPVQRALQFHDDVV--AQGFRLDQV----- 169
R D VS++ + + +RR+ P + + ++ + AQ R+D+
Sbjct: 199 -RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 170 --------SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
S++ +I G + + A L ++ + +V+ +TT+I ++K +
Sbjct: 258 VMPERDFASWNTMITGFIRNREMNKACGLF----DRMPEKNVISWTTMITGYVENKENEE 313
Query: 222 AFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI-DPDAYTFNIL 279
A N++S+M+ + PNV TY +++ + L E ++ ++++K++ + + L
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI-HQLISKSVHQKNEIVTSAL 372
Query: 280 VDGLCKEGKVKGAKNVL--GVM----------MIYGFCIVGQLKEATELLDEMVTKNIDP 327
++ K G++ A+ + G++ MI + G KEA E+ ++M P
Sbjct: 373 LNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
Query: 328 DAYTF 332
A T+
Sbjct: 433 SAVTY 437
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 182/426 (42%), Gaps = 67/426 (15%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A F+F+ + R + +L + P + + +E G+ S++ + LI+
Sbjct: 101 AFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALID 160
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
CY G + ++ K+ +K + DT+++ +++ GL +++ A + D++ +
Sbjct: 161 CYSRCGGLGVRDAM--KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR---- 214
Query: 128 DQVSYSILTLKFSR-RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
D +S++ + ++R R +S +A + + + + + VS+S ++ G K G +
Sbjct: 215 DLISWNTMLDGYARCREMS-----KAFELFEKMPER----NTVSWSTMVMGYSKAGDMEM 265
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
A + K+ L +VV +T II + L+ +A L +MV+ + + +++
Sbjct: 266 ARVMFDKM--PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
G L + + N+ +AY N L+D K G +K A +V +
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF------------------------ 332
M++G + G KEA EL M + I PD TF
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 333 ------------SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
LVD L + G++K A V+ M ++PNVV + +L+ + +EV
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEV 500
Query: 381 NKAKDI 386
+ AK++
Sbjct: 501 DIAKEV 506
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 156/359 (43%), Gaps = 43/359 (11%)
Query: 29 KILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKK 88
K++++L + A+ + +Q++ N+ + LI + Q AF V +++ +
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQEP----NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G D T+ L+K + + H+ + G D + L +SR
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSR--CGGLG 169
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
V+ A++ + + + D VS++ ++ GL K G+ + A R++ ++ Q D++ + T
Sbjct: 170 VRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDA----RRLFDEMPQRDLISWNT 221
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
++D + + ++ AF L+ +M + N +++ ++ G+ G ++ A + D+M
Sbjct: 222 MLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLP- 276
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVL-GVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
AKNV+ ++I G+ G LKEA L+D+MV +
Sbjct: 277 -----------------------AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
DA ++ + G + + ++ + + N N+L+D + + KA D+
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 157/394 (39%), Gaps = 70/394 (17%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
RL P +I + +L + + A L +M N V+ S ++ Y G
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAG 261
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY- 132
+ A + K+ + +T+T +I G ++ A + D +VA G + D +
Sbjct: 262 DMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 133 SILT-------LKFSRRVISPTP-----------------------VQRALQFHDDVVAQ 162
SIL L R+ S +++A +D+ +
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
D VS++ +++GL G K A++L ++ + ++PD V + ++ S L+ +
Sbjct: 380 ----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 223 FNLYSEMVS-KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
+ + M ++P V Y L+ VG+LKEA +++ M ++P+ + L+
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALL- 491
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFSILVDGLC 340
G C+ + ++ A E+LD +V +DP D +S+L +
Sbjct: 492 GACR--------------------MHNEVDIAKEVLDNLV--KLDPCDPGNYSLLSNIYA 529
Query: 341 KEGKVKGAKNVLGVMMKQGV-KPNVVTYNSLMDG 373
+G ++ M GV KP+ + L DG
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKPSGASSVELEDG 563
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 91 QPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQ 150
+PD ++ TLIKGLC A+ D++ +G + D ++++IL + +
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILL----HESYTKGKFE 229
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
Q +V + + D SY+ + GL +++ + L K++G ++PDV +T +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
+ + +A Y E+ P F + +L+ C G L+ A EL E+ K +
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVL 296
D +VD L K K A+ ++
Sbjct: 350 VDEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 27/291 (9%)
Query: 115 QFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSY--- 171
+F A+ FR + Y R + + ++ ++++ + + +S
Sbjct: 57 KFKKACQAEWFRKNIAVYE--------RTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGF 108
Query: 172 -SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
+ +IN ++G + A ++ ++ + + + + ++++ K ++ E+
Sbjct: 109 VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELP 168
Query: 231 SK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
K I P+V +Y LI G C G EA L+DE+ K + PD TFNIL+ +GK
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 290 KGAKNVLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+ + + M+ + G + + +E L D++ + PD +TF+ +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ G EGK+ A + K G +P +NSL+ C ++ A ++
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII-DSLCKDKLVTDAFNL 225
D SY+ LI GLC G A+ L+ +IE K ++PD + + ++ +S K K + +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF-EEGEQI 234
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCK 285
++ MV K + ++ +Y A + G + + +E L D++ + PD +TF ++ G
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 286 EGKVKGA--------KNVLGVM------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 331
EGK+ A KN + ++ C G L+ A EL E+ K + D
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 332 FSILVDGLCKEGKVKGAKNVL 352
+VD L K K A+ ++
Sbjct: 355 LQEVVDALVKGSKQDEAEEIV 375
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 126/268 (47%), Gaps = 36/268 (13%)
Query: 113 ALQFHDDVVAQGFRLDQVSYSILTLKF-------SRRVISPTPVQRALQFHDDVVAQGFR 165
AL+ ++D++ +G + +SY ++ F S+R I V+ + D +G +
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED----KGLK 455
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNL 225
+ ++ ++ K +T A+Q+ + + +P V+ Y ++ +L K KL +AF +
Sbjct: 456 PQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRV 515
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEA--TELLDEMVTKNIDPDAYTFNILVDGL 283
++ M+ I PN++ YT + + GQ K LL EM +K I+P TFN ++ G
Sbjct: 516 WNHMIKVGIEPNLYAYTTM--ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 284 CKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEG 343
+ G + GV A E M ++N++P+ T+ +L++ L +
Sbjct: 574 ARNG-------LSGV--------------AYEWFHRMKSENVEPNEITYEMLIEALANDA 612
Query: 344 KVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
K + A + +G+K + Y++++
Sbjct: 613 KPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 28/229 (12%)
Query: 152 ALQFHDDVVAQGFRLDQVSY-------SILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
AL+ ++D++ +G + +SY +IL++ K G + ++LL K+E K ++P
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+ ++ + K T A ++ MV P V +Y AL+ EA + + M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKN 324
+ I+P+ Y + + L + K N+L LL EM +K
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKF----NLLDT-----------------LLKEMASKG 558
Query: 325 IDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDG 373
I+P TF+ ++ G + G A M + V+PN +TY L++
Sbjct: 559 IEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 157/379 (41%), Gaps = 39/379 (10%)
Query: 34 LVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPD 93
L M+ + A + ME GI+ N+VT + L+ Y G+ A +L +KG++P+
Sbjct: 194 LGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPN 253
Query: 94 TITFTTLIKGLCLNAQVQRALQFHDDV------------VAQGFRLDQVSYSILTLKFSR 141
IT++T + AL+F ++ V + + V +
Sbjct: 254 PITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICY 313
Query: 142 RVISPTPVQ------RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE 195
+V+ V+ R L+ + + + G R + + LI + +L ++I
Sbjct: 314 QVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIR 373
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIV---- 251
+ + + + +I + K K A +Y +++ + PN +Y ++ F I+
Sbjct: 374 ERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAA 433
Query: 252 ---GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------- 299
G + LL++M K + P +N ++ K + A + M
Sbjct: 434 SKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTV 493
Query: 300 MIYGFCIV----GQL-KEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGV 354
+ YG + G+L EA + + M+ I+P+ Y ++ + L + K +L
Sbjct: 494 ISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKE 553
Query: 355 MMKQGVKPNVVTYNSLMDG 373
M +G++P+VVT+N+++ G
Sbjct: 554 MASKGIEPSVVTFNAVISG 572
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 121/276 (43%), Gaps = 11/276 (3%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS E +++ + + +HY L ++ ++ + LI + A +
Sbjct: 344 PSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEI 403
Query: 82 LAKILKKGYQPDTITFTTLIK--GLCLNAQVQRAL-----QFHDDVVAQGFRLDQVSYSI 134
+L +G +P+ +++ ++ + L+A +R + + + + +G + + ++
Sbjct: 404 YEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNA 463
Query: 135 LTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKI 194
+ + S+ + A+Q +V G + +SY L++ L K A ++ +
Sbjct: 464 VLVACSK----ASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 195 EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL 254
++P++ YTT+ L + L EM SK I P+V T+ A+I G G
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
A E M ++N++P+ T+ +L++ L + K +
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPR 615
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
HD G +D VS++I I C++G A +R++E + PDVV YTT+I +L K
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224
Query: 216 DKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYT 275
+ L++ MV K PN+ T+ I + +A +LL M ++PD+ T
Sbjct: 225 HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284
Query: 276 FNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMV 321
+N+++ G A+ V M MI+ C G A + + +
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
K P+ T +L+ GL K+G++ AK+++ ++ ++
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
GI + V+ +I I +C LG + A+ + ++ K G PD +T+TTLI L + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 114 LQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ---GFRLDQVS 170
+ +V +G + + ++++ R+ +RA +D ++ D ++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNV-------RIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
Y+++I G A ++ + GK +P++ +Y T+I LCK A+ + + +
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
K+ PN+ T L+ G GQL +A ++ E+V + + P
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 24/232 (10%)
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
H + QG R + I++ G K G TK AL ++ + V + + L
Sbjct: 96 HQKTLPQGRREGFIVRIIMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSF 153
Query: 216 DKLVTDAFNLYSEMVSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+ + + + SK I + ++ I FC +G L A + EM + PD
Sbjct: 154 NPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVV 213
Query: 275 TFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
T+ L+ L K + C++G L + MV K P+ TF++
Sbjct: 214 TYTTLISALYKHER----------------CVIG-----NGLWNLMVLKGCKPNLTTFNV 252
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ L + A ++L +M K V+P+ +TYN ++ G L + A+ +
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERV 304
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
+++GLCK G + A++L + K P+VV+YT ++++ CK + DA ++ +M +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
I PN F+Y L+ G L +A EM+ P+ TF LVD LC+ V+ A+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDE 319
+ + + GF + +K E +D+
Sbjct: 257 SAIDTLNQKGFAV--NVKAVKEFMDK 280
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 189 QLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ +K+ EG L+ P+ V ++D LCKD LV +A L+ M K +P V YTA++
Sbjct: 120 EIFKKMKEGGLI-PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC ++++A + +M I P+A+++ +LV GL
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYN---------------------C 214
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L +A EM+ P+ TF LVD LC+ V+ A++ + + ++G NV
Sbjct: 215 NMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAV 274
Query: 368 NSLMD 372
MD
Sbjct: 275 KEFMD 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------M 300
+++ E+ +M + P+A ++DGLCK+G V+ A + G+M +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+ FC ++++A + +M I P+A+++ +LV GL + A M++ G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAK 384
PNV T+ L+D C V V +A+
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQ 256
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
VQ A++ + +G + V Y+ ++ CK + + A ++ RK++ + P+ Y
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
++ L ++ DA SEM+ PNV T+ L+ C V +++A +D + K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
+++GLCK G + A++L + K P+VV+YT ++++ CK + DA ++ +M +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
I PN F+Y L+ G L +A EM+ P+ TF LVD LC+ V+ A+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDE 319
+ + + GF + +K E +D+
Sbjct: 257 SAIDTLNQKGFAV--NVKAVKEFMDK 280
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 189 QLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
++ +K+ EG L+ P+ V ++D LCKD LV +A L+ M K +P V YTA++
Sbjct: 120 EIFKKMKEGGLI-PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV 307
FC ++++A + +M I P+A+++ +LV GL
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYN---------------------C 214
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
L +A EM+ P+ TF LVD LC+ V+ A++ + + ++G NV
Sbjct: 215 NMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAV 274
Query: 368 NSLMD 372
MD
Sbjct: 275 KEFMD 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 255 KEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------M 300
+++ E+ +M + P+A ++DGLCK+G V+ A + G+M +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+ FC ++++A + +M I P+A+++ +LV GL + A M++ G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 361 KPNVVTYNSLMDGHCLVSEVNKAK 384
PNV T+ L+D C V V +A+
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQ 256
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
VQ A++ + +G + V Y+ ++ CK + + A ++ RK++ + P+ Y
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
++ L ++ DA SEM+ PNV T+ L+ C V +++A +D + K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
++PD+ Y +I C+ + ++++ +EM K I PN ++ +I GF + E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM--------------IYGF 304
++L M + ++ T+NI + LCK K K AK +L M+ I+GF
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C +EA +L MV + PD+ + L+ LCK G + A ++ M++ P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
SL++G S+V +AK++
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKEL 384
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP 148
G +PD T+ +IK C + + ++ +G + + S+ ++ F S
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKS-DE 240
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
V + L D +G + +Y+I I LCK ++K A LL + ++P+ V Y+
Sbjct: 241 VGKVLAMMKD---RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSH 297
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+I C + +A L+ MV++ P+ Y LIY C G + A L E + KN
Sbjct: 298 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
P LV+GL K+ KV+ AK ++G
Sbjct: 358 WVPSFSIMKSLVNGLAKDSKVEEAKELIG 386
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G D +Y+ +I C+ G + ++ ++E K ++P+ + +I + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+ + M + + V TY I C + KEA LLD M++ + P+ T++ L+ G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 283 LCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNIDPD 328
C E + AK + +M +IY C G + A L E + KN P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSL 370
LV+GL K+ KV+ AK ++G +K+ NV +N +
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIG-QVKEKFTRNVELWNEV 402
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCL---NAQV 110
GI ++ T + +I +C G ++S++A++ +KG +P++ +F +I G + +V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 111 QRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVS 170
+ L D +G + +Y+I +R S + A D +++ G + + V+
Sbjct: 242 GKVLAMMKD---RGVNIGVSTYNIRIQSLCKRKKS----KEAKALLDGMLSAGMKPNTVT 294
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
YS LI+G C + A +L + + + +PD Y T+I LCK A +L E +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELL---DEMVTKNID 270
K +P+ +L+ G +++EA EL+ E T+N++
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVE 397
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
+ D+L KD +A L+S++ K +P+V +TA++ + GQ KE ++ M+
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 269 IDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
+ P+AYT+++L+ GL +GK K+A + L EM+ + P+
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTH--------------------KDAKKYLLEMMGNGMSPN 302
Query: 329 AYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
A T++ + + +EGK + A+ +L M +G P+
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 155 FHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLC 214
FH + +GF + V + + L K G+T AL+L +I+ K PDVV +T I+++
Sbjct: 188 FHK-MRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 215 KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQL-KEATELLDEMVTKNIDPDA 273
+ ++ M++ + PN +TY+ LI G G+ K+A + L EM+ + P+A
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNA 303
Query: 274 YTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
T+ + + +EGK + A+ +L M GF
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKGF 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G+ EA EL ++ KN PD V ++ + GQ K
Sbjct: 211 GRTHEALELFSQIKDKNRMPDV---------------------VAHTAIVEAYANAGQAK 249
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV-KGAKNVLGVMMKQGVKPNVVTYNSL 370
E ++ M+ + P+AYT+S+L+ GL +GK K AK L MM G+ PN TY ++
Sbjct: 250 ETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAV 309
Query: 371 MDGHCLVSEVNKAKDI 386
+ + A+++
Sbjct: 310 FEAFVREGKEESAREL 325
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKD-KLVTDAFNL 225
D V+++ ++ GQ K L++ ++ V P+ Y+ +I L D K DA
Sbjct: 231 DVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKY 290
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
EM+ + PN TYTA+ F G+ + A ELL EM K PD
Sbjct: 291 LLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D YS LI+ + K GQT+ A+ L +++ +PD +Y +I + + A
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 227 SEMVSK-----RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
+ K R PNV TY L+ F G++ + L ++ + PD YTFN
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN---- 247
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
GVM YG G +KE +L M + PD TF++L+D K
Sbjct: 248 ---------------GVMDAYG--KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ + + + +M+ KP + T+NS++ + ++KA+
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 30/242 (12%)
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR----KIEG-KLVQPDVVMY 206
A+ ++ G R D Y+ LI AL+ +R K++G + QP+VV Y
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
++ + + V L+ ++ + P+V+T+ ++ + G +KE +L M +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
PD TFN+L+D K+ + + + +M + KE
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM--------RSKEK------------- 310
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS--LMDGHCLVSEVNKAK 384
P TF+ ++ K + A+ V M P+ +TY +M G+C V++A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 385 DI 386
+I
Sbjct: 369 EI 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/364 (18%), Positives = 147/364 (40%), Gaps = 35/364 (9%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
L VF + + R + P + K+++ + K A+ L +M++SG + + LI
Sbjct: 117 LEVFRWMQKQRWY-IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALI 175
Query: 67 NCYCHLGQIPFAFSVLAKILKK-----GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ H A + L K QP+ +T+ L++ + +V + D+
Sbjct: 176 TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
D +++ + + + + ++ + + + D +++++LI+ K
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGM----IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKK 291
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ + Q + + +P + + ++I + K +++ A ++ +M +P+ TY
Sbjct: 292 QEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITY 351
Query: 242 TALI--YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+I YG+C G + A E+ +E+ + A T N +++ C+ G +
Sbjct: 352 ECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG-----------L 398
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
I EA +L + PDA T+ L K + + ++ M K G
Sbjct: 399 YI----------EADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 360 VKPN 363
+ PN
Sbjct: 449 IVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D YS LI+ + K GQT+ A+ L +++ +PD +Y +I + + A
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 227 SEMVSK-----RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
+ K R PNV TY L+ F G++ + L ++ + PD YTFN
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN---- 247
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
GVM YG G +KE +L M + PD TF++L+D K
Sbjct: 248 ---------------GVMDAYG--KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ + + + +M+ KP + T+NS++ + ++KA+
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 30/242 (12%)
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLR----KIEG-KLVQPDVVMY 206
A+ ++ G R D Y+ LI AL+ +R K++G + QP+VV Y
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
++ + + V L+ ++ + P+V+T+ ++ + G +KE +L M +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
PD TFN+L+D K+ + + + +M + KE
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM--------RSKEK------------- 310
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNS--LMDGHCLVSEVNKAK 384
P TF+ ++ K + A+ V M P+ +TY +M G+C V++A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 385 DI 386
+I
Sbjct: 369 EI 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/364 (18%), Positives = 147/364 (40%), Gaps = 35/364 (9%)
Query: 7 LAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
L VF + + R + P + K+++ + K A+ L +M++SG + + LI
Sbjct: 117 LEVFRWMQKQRWY-IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALI 175
Query: 67 NCYCHLGQIPFAFSVLAKILKK-----GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVV 121
+ H A + L K QP+ +T+ L++ + +V + D+
Sbjct: 176 TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
D +++ + + + + ++ + + + D +++++LI+ K
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGM----IKEMEAVLTRMRSNECKPDIITFNVLIDSYGKK 291
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
+ + Q + + +P + + ++I + K +++ A ++ +M +P+ TY
Sbjct: 292 QEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITY 351
Query: 242 TALI--YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
+I YG+C G + A E+ +E+ + A T N +++ C+ G +
Sbjct: 352 ECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG-----------L 398
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
I EA +L + PDA T+ L K + + ++ M K G
Sbjct: 399 YI----------EADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 360 VKPN 363
+ PN
Sbjct: 449 IVPN 452
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 164 FRLDQVSYSILINGLCKMG-QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
F +D +++++NG C + A ++ R++ + P+ Y+ +I K + D+
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
LY EM + + P + Y +L+Y EA +L+ ++ + + PD+ T+N ++
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 283 LCKEGKVKGAKNVLGVMM----------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTF 332
LC+ GK+ A+NVL M+ + F ++ E+L +M ++ P TF
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETF 433
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+++ L K + + A + M + + N Y + + G + KA++I
Sbjct: 434 LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREI 487
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 34/317 (10%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC-LNAQVQRALQFHDDVVAQ 123
L+ C G I A + KK + D F ++ G C + V A + ++
Sbjct: 230 LLCALCRHGHIEKAEEFMLAS-KKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNY 288
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
++ SYS + FS+ + +L+ +D++ +G Y+ L+ L +
Sbjct: 289 CITPNKDSYSHMISCFSK----VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDC 344
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
A++L++K+ + ++PD V Y ++I LC+ + A N+ + M+S+ + P V T+ A
Sbjct: 345 FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---- 299
+ ++ E+L +M ++ P TF +++ L K + + A + M
Sbjct: 405 FLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFE 460
Query: 300 ----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
I G G L++A E+ EM +K + + ++ L +E KVKG +
Sbjct: 461 IVANPALYLATIQGLLSCGWLEKAREIYSEMKSK-----GFVGNPMLQKLLEEQKVKGVR 515
Query: 350 -----NVLGVMMKQGVK 361
N+ V ++G K
Sbjct: 516 KSKRMNLQKVGSQEGYK 532
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 13/251 (5%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A + +M + I N + S +I+C+ +G + + + ++ K+G P + +L+
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
L A++ + +G + D V+Y+ + I P L +V+A
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM--------IRPLCEAGKLDVARNVLAT 389
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
+ + + + L++L +++ + P + I+ L K K +A
Sbjct: 390 MISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENA 449
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+++EM I+ N Y A I G G L++A E+ EM +K + N ++
Sbjct: 450 LKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK-----GFVGNPMLQK 504
Query: 283 LCKEGKVKGAK 293
L +E KVKG +
Sbjct: 505 LLEEQKVKGVR 515
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 20/333 (6%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
G S++ SS LI Y G++ A V +I K+ + +++T++I+G LN A
Sbjct: 106 GYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR----NIVSWTSMIRGYDLNGNALDA 161
Query: 114 LQ-FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQ-FHDDVVAQGFRLDQVSY 171
+ F D +V + D + + L S P + + H V+ +GF
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
+ L++ K G+ A+ RKI ++V D V Y +I+ + + +AF ++ +V
Sbjct: 222 NTLLDAYAKGGEGGVAVA--RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 232 KRILP-NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
+++ N T + ++ G L+ + D+++ ++ D ++D CK G+V+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 291 GAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
A+ M MI G+ + G +A EL M+ + P+ TF ++
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 341 KEG-KVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
G V+G + + + GV+P + Y ++D
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 144/339 (42%), Gaps = 67/339 (19%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+M G+ + +T S +I C A ++ K G PD +T++ ++ +
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
+V+ L ++ VA G++ D +++S+L F + D
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMF---------------------GEAGDYDG 309
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
+ Y +L++++ V+P+VV+Y T+++++ + A +L++E
Sbjct: 310 IRY------------------VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
M+ + PN T TAL+ + ++A +L +EM K D +N L++ +C +
Sbjct: 352 MLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCAD-- 408
Query: 289 VKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFSILVDGLCKEGKVKG 347
+G +EA L ++M PD ++++ +++ GK +
Sbjct: 409 ------------------IGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 348 AKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
A + M+K GV+ NV M CLV + KAK I
Sbjct: 451 AMELFEEMLKAGVQVNV------MGCTCLVQCLGKAKRI 483
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 112/266 (42%), Gaps = 5/266 (1%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ F R+ +T P + + IL K +SL + ++G + + S+L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G VL ++ +P+ + + TL++ + + A ++++ G
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 128 DQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
++ + + L + + + + ALQ +++ A+ + +D + Y+ L+N +G + A
Sbjct: 360 NEKTLTALVKIYGKARWA----RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEA 415
Query: 188 LQLLRKI-EGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
+L + E +PD YT +++ A L+ EM+ + NV T L+
Sbjct: 416 ERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQ 475
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPD 272
++ + + D + + + PD
Sbjct: 476 CLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 27/235 (11%)
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
D V+Y+++I G A L+++++ + PDV+ YT++I+ C + DA+ L
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN----IDPDAYTFNILVDG 282
EM + N TY+ ++ G C G ++ A ELL EM ++ I P+A T+ +++
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 283 LCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
C++ +V+ A VL M G C+ ++ +L + V +N D D S L+D L K
Sbjct: 284 FCEKRRVEEALLVLDRMGNRG-CMPNRVTAC--VLIQGVLEN-DEDVKALSKLIDKLVKL 339
Query: 343 GKV-------------------KGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVS 378
G V + A+ + +M+ +GV+P+ + + + CL+
Sbjct: 340 GGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLE 394
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 60/332 (18%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
+ ++ V +++I + G + A ++ ++ G PD IT+T++I G C ++
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKI--- 216
Query: 114 LQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSI 173
DD +RL + + HD V L+ V+YS
Sbjct: 217 ----DD----AWRL----------------------AKEMSKHDCV------LNSVTYSR 240
Query: 174 LINGLCKMGQTKPALQLLRKIE----GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
++ G+CK G + AL+LL ++E G L+ P+ V YT +I + C+ + V +A + M
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
Query: 230 VSKRILPNVFTYTALIYGFCIVGQ-LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
++ +PN T LI G + +K ++L+D++V + F+ L + +
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKR 360
Query: 289 VKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNIDP--DAYTF 332
+ A+ + +M++ G C++ + + L E+ K++ D+
Sbjct: 361 WEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIH 420
Query: 333 SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
++L+ GLC++G A + M+ + ++ V
Sbjct: 421 AVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKV 452
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 46 LSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLC 105
L +M+ G+ +++T + +IN YC+ G+I A+ + ++ K +++T++ +++G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 106 LNAQVQRALQFHDD------------------VVAQGF-RLDQVSYSILTLK-------F 139
+ ++RAL+ + +V Q F +V ++L L
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQV----------SYSILINGLCKMGQTKPALQ 189
RV + +Q L+ +DV A +D++ +S L +M + + A +
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT--YTALIYG 247
+ R + + V+PD + + + LC + D F LY E+ K + + + + L+ G
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 248 FCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
C G EA +L M+ K + +++ L K G
Sbjct: 427 LCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 209 IIDSLC-KDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK 267
I+ +LC + L +A + + + + Y +I F G L A L+ EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDP 327
+ PD T+ MI G+C G++ +A L EM +
Sbjct: 195 GLYPDVITY---------------------TSMINGYCNAGKIDDAWRLAKEMSKHDCVL 233
Query: 328 DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG----VKPNVVTYNSLMDGHCLVSEVNKA 383
++ T+S +++G+CK G ++ A +L M K+ + PN VTY ++ C V +A
Sbjct: 234 NSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 149/347 (42%), Gaps = 42/347 (12%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I+ + ++L K A + +M + ++ + ++++N Y +G + A +
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKL 173
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
++ +K D+ ++T ++ G Q + AL + + R+ +I T+ +
Sbjct: 174 FDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQ----RVPNSRPNIFTVSIAV 225
Query: 142 RVISPTP-VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ ++R + H +V G D+V +S L++ K G A R I K+V+
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEA----RNIFDKIVE 281
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
DVV +T++ID K + F+L+SE+V PN +T+ ++ + + ++
Sbjct: 282 KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEM 320
M DP ++ + LVD K G ++ AK+V
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV------------------------- 376
Query: 321 VTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
V PD +++ L+ G + G+ A +++K G KP+ VT+
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 132/324 (40%), Gaps = 43/324 (13%)
Query: 84 KILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF--------RLDQVSYSIL 135
++L + +P T+ LI+ ++ + H+ + GF RL ++
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 136 TLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIE 195
+L +R+V P + D S+++++NG ++G L+ RK+
Sbjct: 135 SLVDARKVFDEMPNR----------------DLCSWNVMVNGYAEVG----LLEEARKLF 174
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI---LPNVFTYTALIYGFCIVG 252
++ + D +T ++ K +A LYS M +R+ PN+FT + + V
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM--QRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL----------GVMMIY 302
++ E+ +V +D D ++ L+D K G + A+N+ MI
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 303 GFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKP 362
+ + +E L E+V P+ YTF+ +++ + K V G M + G P
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 363 NVVTYNSLMDGHCLVSEVNKAKDI 386
+SL+D + + AK +
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHV 376
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 161/365 (44%), Gaps = 30/365 (8%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
TP + + +L + K+ + I + SG+ ++ + L++ Y LG
Sbjct: 59 ATPKL--YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP---GM 113
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
++ + D I++T+++ G + +AL+ ++V+ G ++ TL
Sbjct: 114 RETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE-----FTLSS 168
Query: 140 SRRVISP-TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKL 198
+ + S V+ FH V+ GF + S L G + + R++ ++
Sbjct: 169 AVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY---LYGVNREPVDA-RRVFDEM 224
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIYGFCIVGQLKEA 257
+PDV+ +T ++ + K+ L +A L+ M K ++P+ T+ ++ + +LK+
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 258 TELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIV 307
E+ +++T I + + L+D K G V+ A+ V M ++ G+C
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G+ ++A E+ EM K D Y F ++ V+ K + G +++G NV+
Sbjct: 345 GEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 368 NSLMD 372
++L+D
Sbjct: 401 SALID 405
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 163/369 (44%), Gaps = 38/369 (10%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P FG +LT+ ++ + ++ ++GI SN+V S L++ Y G + A V
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
+ KK ++++++ L+ G C N + ++A++ ++ + Y T+ +
Sbjct: 323 FNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL------YCFGTVL--K 370
Query: 142 RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQP 201
V+ + H V +G + + S LI+ K G A ++ K+
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA----SRVYSKMSIR 426
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
+++ + ++ +L ++ +A + +++MV K I P+ ++ A++ G + E
Sbjct: 427 NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF 486
Query: 262 DEMV-TKNIDPDAYTFNILVDGLCKEGKVKGAKNVL------------GVMMIYGFCIVG 308
M + I P ++ ++D L + G + A+N+L GV++ G C
Sbjct: 487 VLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL--GPCAAN 544
Query: 309 QLKEATELLDEMVTK--NIDPDAYTFSILVDGLCKE-GKVKGAKNVLGVMMKQGVKPNVV 365
+A+ + + + + ++P + +L+ + K G+ A N+ +M+++GV V
Sbjct: 545 A--DASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Query: 366 TYNSLMDGH 374
S +D H
Sbjct: 603 --QSWIDAH 609
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 145/373 (38%), Gaps = 96/373 (25%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLG 73
R+ P P +I + +L++ K Y A+ L + M H G
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM--------------------HRG 258
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
KG PD TF T++ ++++ + H ++ G + V S
Sbjct: 259 --------------KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
L + + V+ A Q + + + + VS+S L+ G C+ G+ + A+++ R+
Sbjct: 305 SLLDMYGK----CGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 194 IE---------------------------GKLVQ----PDVVMYTTIIDSLCKDKLVTDA 222
+E G+ V+ +V++ + +ID K + A
Sbjct: 357 MEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG 282
+YS+M + N+ T+ A++ G+ +EA ++MV K I PD +F ++
Sbjct: 417 SRVYSKMS----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 283 LCKEGKVKGAKNVLGVMM-IYGF--------CIV------GQLKEATELLDEMVTKNIDP 327
G V +N +M YG C++ G +EA LL+ +N
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN--- 529
Query: 328 DAYTFSILVDGLC 340
DA + +L+ G C
Sbjct: 530 DASLWGVLL-GPC 541
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 161/357 (45%), Gaps = 54/357 (15%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N+VT + LI+ Y ++ ++ +G QP++ TF + L R LQ H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 118 DDVVAQGFRLDQ---VSYSILTL-------KFSRRVISPTPVQRALQFHDDV---VAQGF 164
VV G LD+ VS S++ L + +R + T V+ + ++ + A G
Sbjct: 218 TVVVKNG--LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 165 RLDQVS--YSILINGLCKMGQTKPA--------LQLLRKIEGKLVQPDVVMYTTIIDSLC 214
L+ + YS+ +N ++ ++ A L+ LR E + VV Y + D
Sbjct: 276 DLEALGMFYSMRLN-YVRLSESSFASVIKLCANLKELRFTE--QLHCSVVKYGFLFDQNI 332
Query: 215 KDKLVT---------DAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
+ L+ DA L+ E+ + NV ++TA+I GF +EA +L EM
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 266 TKNIDPDAYTFNILVDGL--CKEGKVKGA--------KNVLGVMMIYGFCIVGQLKEATE 315
K + P+ +T+++++ L +V + +G ++ + +G+++EA +
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 316 LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+ + D D +S ++ G + G+ + A + G + K G+KPN T++S+++
Sbjct: 450 VFSGI----DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCL--NAQVQRALQ 115
++V S ++ Y G+ A + ++ K G +P+ TF++++ +C NA + + Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQ 516
Query: 116 FHDDVVAQGFRLDQ---VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
FH + RLD VS ++LT+ + I ++V + D VS++
Sbjct: 517 FHGFAIKS--RLDSSLCVSSALLTMYAKKGNIESA---------EEVFKRQREKDLVSWN 565
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
+I+G + GQ AL + ++++ + V+ D V + + + LV + + MV
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 233 -RILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+I P + ++ + GQL++A ++++ M
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G+ D ++YS L+ GLCK + + A +L ++E + PD+ +T +I CK+ + A
Sbjct: 400 GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Query: 223 FNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV-TKNIDPDAYTFNILVD 281
++ M+ K + LI GF I + + A+ L EMV N+ P T+ +L+D
Sbjct: 460 LACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLID 519
Query: 282 GLCKEGKVKGAKNVLGVMMIYGF-----------CIVGQLKEATELLDEMVTKNIDPDAY 330
L K K + A ++L +M + G L++A + LD + +K+ P
Sbjct: 520 KLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD-SPSFA 578
Query: 331 TFSILVDGLCKEGKVKGAKNVL 352
+ +++ +EG++ AKN+L
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLL 600
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 131/337 (38%), Gaps = 59/337 (17%)
Query: 72 LGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS 131
L + F V GYQ T+T+ ++ L V D++ G+ +D +
Sbjct: 241 LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDT 300
Query: 132 YSILTLKFSRRVI--------------------------------SPTP-VQRALQFHDD 158
Y ++ +F + + SP P + +
Sbjct: 301 YIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRK 360
Query: 159 VVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
+ G L + Y + L +G+ A ++ + + +PD + Y+ ++ LCK K
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR 420
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI 278
+ +A + +M ++ P++ T+T LI G C +L +A M+ K D D+ ++
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480
Query: 279 LVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV-TKNIDPDAYTFSILVD 337
L+DG K +G A+ L EMV N+ P T+ +L+D
Sbjct: 481 LIDGFVIHNKFEG---------------------ASIFLMEMVKNANVKPWQSTYKLLID 519
Query: 338 GLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
L K K + A ++L +M KQ N Y DG+
Sbjct: 520 KLLKIKKSEEALDLLQMMKKQ----NYPAYAEAFDGY 552
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
VG+ EA E+ M +PD T+S LV GLCK +++ A+ VL M QG P++ T
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 367 YNSLMDGHCLVSEVNKA 383
+ L+ GHC +E++KA
Sbjct: 443 WTILIQGHCKNNELDKA 459
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I + +++ L K K A + QME+ G ++ T +ILI +C ++ A +
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG-FRLDQVSYSILTLKFS 140
A +L+KG+ D+ LI G ++ + + A F ++V + Q +Y +L K
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDK-- 520
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING-LCKMGQTKPALQLLRKIEGKLV 199
++ + AL D++ + + +Y+ +G L K G + A + L + K
Sbjct: 521 --LLKIKKSEEAL----DLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSK-D 573
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNL 225
P Y +I++ ++ +TDA NL
Sbjct: 574 SPSFAAYFHVIEAFYREGRLTDAKNL 599
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 184 TKP--ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
KP AL L ++ + P V+ YTT+ID + A ++ EM K LPNVFTY
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
++I G C+ G+ +EA LL EM ++ +P+ ++ LV L K GK+ A+ V+ M+
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 302 YG 303
G
Sbjct: 823 KG 824
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 21/138 (15%)
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
A + M I P+V YT LI G+ + G+L +A E+ EM K P+ +T+N
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYN---- 763
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
MI G C+ G+ +EA LL EM ++ +P+ +S LV L K
Sbjct: 764 -----------------SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRK 806
Query: 342 EGKVKGAKNVLGVMMKQG 359
GK+ A+ V+ M+K+G
Sbjct: 807 AGKLSEARKVIKEMVKKG 824
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A L+ M IDP ++ L+DG G++ AK + M +G PNV TYNS++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 373 GHCLVSEVNKA 383
G C+ E +A
Sbjct: 768 GLCMAGEFREA 778
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/396 (18%), Positives = 148/396 (37%), Gaps = 51/396 (12%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
P P I + I+ + H+ A+ + M+ + + + T L+ L +
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 80 SVLAKILKKGYQPDT---------------------------------ITFTTLIKGLCL 106
V A++ + G+ D +++T ++
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 107 NAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRL 166
N + AL+ + + D V+ + F+ +++ H VV G +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT----CLQDLKQGRSIHASVVKMGLEI 255
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLY 226
+ L K GQ A L K++ P+++++ +I K+ +A +++
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 227 SEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE 286
EM++K + P+ + T+ I VG L++A + + + + D + + L+D K
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 287 GKVKGAK----------NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV 336
G V+GA+ V+ MI G+ + G+ +EA L M + P+ TF L+
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
G V+ M + P Y ++D
Sbjct: 432 MACNHSGMVREGWWFFNRMADHKINPQQQHYACVID 467
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LI+ G I FA V + + P + +I+G N Q AL + ++
Sbjct: 59 LIHASSSFGDITFARQVFDDLPR----PQIFPWNAIIRGYSRNNHFQDALLMYSNM---- 110
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
+L +VS T + S LQ V AQ FRL + + NGL +
Sbjct: 111 -QLARVSPDSFTFPHLLKACSGLS---HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166
Query: 185 KPALQLLRKIEGKLVQPD--VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
L R + L P+ +V +T I+ + ++ +A ++S+M + P+
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226
Query: 243 ALIYGFCIVGQLKEATELLDEMVTK--NIDPD--------------AYTFNILVDGLCKE 286
+++ F + LK+ + +V I+PD T IL D
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFD----- 281
Query: 287 GKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVK 346
K+K +L MI G+ G +EA ++ EM+ K++ PD + + + + G ++
Sbjct: 282 -KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 347 GAKNVLGVMMKQGVKPNVVTYNSLMD 372
A+++ + + + +V ++L+D
Sbjct: 341 QARSMYEYVGRSDYRDDVFISSALID 366
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 169/388 (43%), Gaps = 50/388 (12%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSIL-- 65
A+ +F+ + + P+ + L++ M + Q + I++ M +IL
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANM----GGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 66 --INCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
+N YC +G I +A V ++ +K D +T+ +I G V+ A+ + Q
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAI-----YMCQ 364
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV----VAQGFRLDQVSYSILINGLC 179
RL+++ Y +TL ++S L+ +V + F D V S +++
Sbjct: 365 LMRLEKLKYDCVTLA---TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
K G A +K+ V+ D++++ T++ + + L +A L+ M + + PNV
Sbjct: 422 KCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVI 477
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
T+ +I GQ+ EA ++ +M + I P+ ++ +++G+ + G
Sbjct: 478 TWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG------------ 525
Query: 300 MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQG 359
C +EA L +M + P+A++ ++ + + + + G +++
Sbjct: 526 -----CS----EEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 360 VKPNVVTYN-SLMDGHCLVSEVNKAKDI 386
++V+ SL+D + ++NKA+ +
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P++I + I+ SL++ A + QM+SSGII N+++ + ++N G A
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA--QGFRLDQVSYSILTLK- 138
L K+ + G +P+ + T + A + H ++ Q L + S++ +
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 139 -----------FSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPA 187
F ++ S P+ A +I+ G K A
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNA---------------------MISAYALYGNLKEA 632
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL-PNVFTYTALIY 246
+ L R +EG ++PD + T ++ + + A +++++VSKR + P + Y ++
Sbjct: 633 IALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVD 692
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
G+ ++A L++EM K PDA LV K+ K +
Sbjct: 693 LLASAGETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTE 733
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 66/284 (23%)
Query: 154 QFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII--- 210
+ HD+ Q SY ++ LCK G+ K AL L+ +++ + ++ +Y I+
Sbjct: 24 KHHDE---QAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGC 80
Query: 211 -------------------------DSLCKDKLV-----TDAFNLYSEMVSKRILPNVFT 240
+ + KLV DA + + SK + NVF+
Sbjct: 81 VYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFS 140
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE-GKVKGAKNVLGVM 299
+ A+I C +G + A EM+ I PD N +V +CK G +K ++ GV
Sbjct: 141 WAAIIGVKCRIGLCEGALMGFVEMLENEIFPD----NFVVPNVCKACGALKWSRFGRGVH 196
Query: 300 M-------------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
+YG C G L +A+++ DE+ +N A ++ L+ G
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKC--GVLDDASKVFDEIPDRN----AVAWNALMVGYV 250
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ GK + A + M KQGV+P VT ++ + + V + K
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
S+ ++I+G K + +++R ++ V V Y +I LCK K +A L
Sbjct: 218 ASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDG 277
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
++S R+ PN TY+ LI+GFC L EA L + MV PD+ + L+ LCK
Sbjct: 278 VMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKG-- 335
Query: 289 VKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGA 348
G + A L E + KN P LV+GL KV A
Sbjct: 336 -------------------GDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA 376
Query: 349 KNVLGVMMKQGVKPNVVTYNSL 370
K ++ V +K+ NV +N +
Sbjct: 377 KELIAV-VKEKFTRNVDLWNEV 397
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 199 VQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEAT 258
++PD+ Y +I LC+ + ++++ +EM K I P ++ +I GF + E
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 259 ELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVL-GVM-------------MIYGF 304
+++ M + T+NI++ LCK K AK ++ GVM +I+GF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 305 CIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNV 364
C L EA L + MV PD+ + L+ LCK G + A + M++ P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 365 VTYNSLMDGHCLVSEVNKAKDI 386
L++G S+V++AK++
Sbjct: 358 SVMKWLVNGLASRSKVDEAKEL 379
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR-ILPNVFTYTALI 245
++Q R +E + V ++ + K +A +Y EM I P++ TY +I
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------ 299
C G + ++ EM K I P A +F +++DG KE K + V+ +M
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
MI C + EA L+D +++ + P++ T+S+L+ G C E + A N+
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCL 376
VM+ G KP+ Y +L+ HCL
Sbjct: 310 FEVMVCNGYKPDSECYFTLI--HCL 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 41/280 (14%)
Query: 122 AQGFRLDQVSYSILTLKF-------SRRVIS----PTPVQRALQF-HDDVVAQGFRLDQV 169
A FRL S SI TLK SR +S R L+ ++ + +D++
Sbjct: 17 ATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRI 76
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLV-QPDVVMYTTIIDSLC---KDKLVTDAFNL 225
+S+ + L + QLL +G + QPD + + ++ + ++ +
Sbjct: 77 IFSVAVVTLAREKHFVAVSQLL---DGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQT 133
Query: 226 YSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLC 284
+ + I V + AL++ + KEA + EM I+PD T+N ++ LC
Sbjct: 134 FRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLC 193
Query: 285 KEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
+ G + +++ EM K I P A +F +++DG KE K
Sbjct: 194 ESGSTSSSYSIVA---------------------EMERKWIKPTAASFGLMIDGFYKEEK 232
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAK 384
+ V+ +M + GV V TYN ++ C + +AK
Sbjct: 233 FDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAK 272
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYC 70
I + R P+ FG ++ K + + + M+ G+ + T +I+I C C
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 71 HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQV 130
+ A +++ ++ +P+++T++ LI G C + A+ + +V G++ D
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 131 SYSIL 135
Y L
Sbjct: 324 CYFTL 328
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G ++D +Y+ L + F + + +A + ++ + LD +Y ++I L K G+
Sbjct: 273 GCKIDTQTYNNLMMLFLNKGLP----YKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR 328
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
A +L ++++ + ++P ++++++DS+ K + + +Y EM P+ + +
Sbjct: 329 LDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVS 388
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
LI + G+L A L DEM P+ + ++++ K GK++ A V M G
Sbjct: 389 LIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAG 448
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
F P T+S L++ G+V A + M G++P
Sbjct: 449 FL---------------------PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 364 VVTYNSLM 371
+ +Y SL+
Sbjct: 488 LSSYISLL 495
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 14/231 (6%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
+Y+ +I L K + + A +K + + D Y ++ L AF +Y M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
L + TY +I G+L A +L +M + + P F+ LVD + K G++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 290 KGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTKNIDPDAYTFSIL 335
+ V M +G + G+L A L DEM P+ ++++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 336 VDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ K GK++ A V M K G P TY+ L++ H +V+ A I
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 155/371 (41%), Gaps = 25/371 (6%)
Query: 18 THPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPF 77
+H S + +++ L K + A + + SG + T + L+ + + G +P+
Sbjct: 237 SHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKG-LPY 295
Query: 78 -AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
AF + + K D T+ +I L + ++ A + + + R S+S+
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR---PSFSV-- 350
Query: 137 LKFSRRVISPTPVQR---ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
FS V S R +++ + ++ G R + LI+ K G+ AL+L +
Sbjct: 351 --FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
++ +P+ +YT II+S K + A ++ +M LP TY+ L+ GQ
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQ 468
Query: 254 LKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI------- 306
+ A ++ + M + P ++ L+ L + V A +L M G+ +
Sbjct: 469 VDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDV 528
Query: 307 -VGQLKEAT-----ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+ +K+A+ + L M + I + + L + K G A+ +L ++
Sbjct: 529 LMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAG 588
Query: 361 KPNVVTYNSLM 371
K ++V Y S++
Sbjct: 589 KVDLVLYTSIL 599
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 42/233 (18%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
PS F ++ S K TA+ L +M+ SG N +++I + G++ A +V
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFS 140
+ K G+ P T++ L++ + QV A++ ++ + G R SY S+LTL +
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 141 RRVISPTP----VQRALQFHDDVVA------------------------------QGFRL 166
+R++ +A+ + DV A F +
Sbjct: 501 KRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFII 560
Query: 167 DQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL--CKDK 217
Q+ S + NGL +P L+ L GK+ D+V+YT+I+ L C+D+
Sbjct: 561 RQLFESCMKNGL--YDSARPLLETLVHSAGKV---DLVLYTSILAHLVRCQDE 608
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 160/373 (42%), Gaps = 29/373 (7%)
Query: 32 TSLVKMKHYPTAISLSHQM-----ESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
TSLV M L+ +M S + N S ++ N +L +P F+++ K
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL--VPSVFNLMRKFS 225
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISP 146
+ +P+ +TF I +Q Q H V+ + F+ + + + L +S+
Sbjct: 226 SE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
+ + D + +S++ +I+G+ GQ + A++L K++ + ++PD +
Sbjct: 284 SAYIVFTELKDT-------RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATW 336
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
++I + V +AF + M+S ++P++ T+L+ + LK E+ ++
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIK 396
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKN------------VLGVMMIYGFCIVGQLKEAT 314
+ D + L+D K G A+ V +MI G+ G+ + A
Sbjct: 397 AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAI 456
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMDG 373
E+ + + + ++P TF+ ++ G V+ + +M ++ G KP+ ++D
Sbjct: 457 EIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDL 516
Query: 374 HCLVSEVNKAKDI 386
+ +AK++
Sbjct: 517 LGRSGRLREAKEV 529
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 159/380 (41%), Gaps = 31/380 (8%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
+P+ F +L S K+ L Q+ +G ++ T++ L++ Y + Q+ A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFS 140
VL ++ ++G + + GL N + A + D G ++ V+ + +
Sbjct: 88 VLDEMPERG----IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASV----- 138
Query: 141 RRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
+ ++ +Q H + GF ++ + L++ + G+ A ++ K+ K
Sbjct: 139 --LGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK--- 193
Query: 201 PDVVMYTTIIDSLCKD---KLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEA 257
VV Y I L ++ LV FNL + S+ PN T+ I + L+
Sbjct: 194 -SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYG 250
Query: 258 TELLDEMVTKNIDPDAYTFNILVD--GLCKEGK--------VKGAKNVLGV-MMIYGFCI 306
+L ++ K + L+D C+ K +K +N++ +I G I
Sbjct: 251 RQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMI 310
Query: 307 VGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
GQ + A EL +++ ++ + PD+ T++ L+ G + GKV A M+ + P++
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKC 370
Query: 367 YNSLMDGHCLVSEVNKAKDI 386
SL+ + + K+I
Sbjct: 371 LTSLLSACSDIWTLKNGKEI 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 113/258 (43%), Gaps = 33/258 (12%)
Query: 21 TPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFS 80
T ++I + +++ ++ + TA+ L +++S G+ + T + LI+ + LG++ AF
Sbjct: 295 TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFK 354
Query: 81 VLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ-VSYSILTL-- 137
++L P T+L+ ++ + H V+ D V S++ +
Sbjct: 355 FFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYM 414
Query: 138 -----KFSRRV---ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
++RR+ P P D V ++++I+G K G+ + A++
Sbjct: 415 KCGLSSWARRIFDRFEPKPK-----------------DPVFWNVMISGYGKHGECESAIE 457
Query: 190 LLRKIEGKLVQPDVVMYTTIID--SLCKD-KLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
+ + + V+P + +T ++ S C + + + F L E + P+ +I
Sbjct: 458 IFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK--PSTEHIGCMID 515
Query: 247 GFCIVGQLKEATELLDEM 264
G+L+EA E++D+M
Sbjct: 516 LLGRSGRLREAKEVIDQM 533
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 35/338 (10%)
Query: 53 SGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQR 112
SG ++ ++LI+ Y G I +A V + +K T+T+TT+I G +
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK----STVTWTTMISGCVKMGRSYV 232
Query: 113 ALQF-----HDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD 167
+LQ D+VV G+ L V + L F ++ Q H ++ G +D
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPF---------LEGGKQIHAHILRYGLEMD 283
Query: 168 QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYS 227
++LI+ K G+ A +L + K +++ +TT++ ++ L +A L++
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFT 339
Query: 228 EMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEG 287
M + P+++ ++++ + L T++ + N+ D+Y N L+D K
Sbjct: 340 SMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCD 399
Query: 288 KVKGAKNVLGVM----------MIYGFCIVG---QLKEATELLDEMVTKNIDPDAYTFSI 334
+ A+ V + MI G+ +G +L EA + +M + I P TF
Sbjct: 400 CLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVS 459
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
L+ + +K + G+M K G+ ++ ++L+D
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 149/383 (38%), Gaps = 78/383 (20%)
Query: 14 RLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQ----MESSGIISNMVTSSILI--- 66
RL+R PS++ F SL++ T++ LS Q M G+ ++ S LI
Sbjct: 448 RLIR----PSLLTF----VSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 67 -NCYCHLGQIPFAFS-------VLAKILKKGY---------------------QPDTITF 97
NCYC L F V+ + GY +PD TF
Sbjct: 500 SNCYC-LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 98 TTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD 157
++ A VQ +FH ++ +G + + L L + SP +A D
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL-LDMYAKCGSPEDAHKAF---D 614
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
++ D V ++ +I+ G+ K ALQ+L K+ + ++P+ + + ++ +
Sbjct: 615 SAASR----DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
LV D + M+ I P Y ++ G+L +A EL+++M TK P A +
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK---PAAIVWR 727
Query: 278 ILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVD 337
L+ G K G V E E EM + D+ +F++L +
Sbjct: 728 SLLSGCAKAGNV----------------------ELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 338 GLCKEGKVKGAKNVLGVMMKQGV 360
+G AK V M +GV
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGV 788
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 170/423 (40%), Gaps = 62/423 (14%)
Query: 13 NRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVT-SSILINCYC- 70
++L P +II + +L+ + + A+ L M G+ +M SSIL +C
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 71 ---HLGQIPFAFSVLAKILKKGY--------------------------QPDTITFTTLI 101
G A+++ A + Y D + F +I
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 102 KG---LCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTL-KFSRRVISPTPVQRALQFHD 157
+G L ++ AL D+ FRL + S+LT R S T + + Q H
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMR---FRL--IRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 158 DVVAQGFRLDQVSYSILI----NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
+ G LD + S LI N C L+ R + ++ D+V++ ++
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYC--------LKDSRLVFDEMKVKDLVIWNSMFAGY 530
Query: 214 CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDA 273
+ +A NL+ E+ R P+ FT+ ++ + ++ E +++ + ++ +
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Query: 274 YTFNILVDGLCKEGKVKGAKN----------VLGVMMIYGFCIVGQLKEATELLDEMVTK 323
Y N L+D K G + A V +I + G+ K+A ++L++M+++
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 650
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
I+P+ TF ++ G V+ +M++ G++P Y ++ +NKA
Sbjct: 651 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 384 KDI 386
+++
Sbjct: 711 REL 713
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 156 HDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCK 215
H ++ G LD +ILIN + G + RK+ K+ + ++V ++T++ +
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAG----GMVYARKVFEKMPERNLVSWSTMVSACNH 122
Query: 216 DKLVTDAFNLYSEMV-SKRILPNVFTYTALI--------YGFCIVGQLKEATELLDEMVT 266
+ ++ ++ E +++ PN + ++ I G +V QL+ +V
Sbjct: 123 HGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSF------LVK 176
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATEL 316
D D Y +L+D K+G + A+ V + MI G +G+ + +L
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 317 LDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
+++ N+ PD Y S ++ ++G K + +++ G++ + N L+D +
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 5/256 (1%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
+M+ G++ + T + L++ Y + L+ ++ KG +P+ + + LC N
Sbjct: 934 EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
V++AL + ++G+ L S++ K +IS + +A F V G +
Sbjct: 994 DVKKALDLWQVMESKGWNLGS---SVVQTKIVETLISKGEIPKAEDFLTRVTRNG--MMA 1048
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
+Y +I L G A+ LL + P Y ++I+ L + + A + ++E
Sbjct: 1049 PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
MV + P++ T++ L++ FC Q+ E+ L+ MV P F ++D E
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKN 1168
Query: 289 VKGAKNVLGVMMIYGF 304
A ++ +M G+
Sbjct: 1169 TVKASEMMEMMQKCGY 1184
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTL-- 100
A+ L M G++ ILI+ + + A+ + ++ + + + ++
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 101 -IKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV 159
I+ LCL+ +VQ A +VA G L+ YS +T+ ++ + + L F +V
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEK----QDFEDLLSFIGEV 317
Query: 160 VAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLV 219
+ D + +++ LC+ ++ A + ++E + D V + +I C + +
Sbjct: 318 ---KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDI 374
Query: 220 TDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
A SE++SK P+V++Y A++ G G + +LDEM + TF I+
Sbjct: 375 KRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIM 434
Query: 280 VDGLCKEGKVKGAKNVLGVMMIYGF 304
V G CK + + AK ++ M YG
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGL 459
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 146/370 (39%), Gaps = 49/370 (13%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P + +IL SL + A ++E G + VT ILI C+ G I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L++I+ KGY+PD ++ ++ GL ++ L H + LD++ + + L S
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGL-----FRKGLWQHTHCI-----LDEMKENGMMLSLST 430
Query: 142 RVISPTPVQRALQFHD--DVVAQGFRLDQVSYSILINGLCK----MGQTKPALQLLRKIE 195
I T +A QF + +V + F + S + + L + +G A++L R +
Sbjct: 431 FKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDND 490
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS----KRILPNVFTYTALIYGFCIV 251
+ + D L + + Y + V+ + +LP + +LI
Sbjct: 491 STFSKAE------FFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASED 541
Query: 252 GQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLK 311
G L+ A LLDEM +F +L+ LC L+
Sbjct: 542 GDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASR--------------------AHLR 581
Query: 312 EATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ LL++ D T + LV CK+G + +K + M++ + VTY SL+
Sbjct: 582 VSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLI 641
Query: 372 DGHCLVSEVN 381
C +N
Sbjct: 642 RCFCKKETLN 651
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 20/254 (7%)
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQL-LRKIE--GKLVQPDVVMY 206
++A+ D + +G Y ILI+ L ++ +T+ A ++ L +E +L ++
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+I+ LC D+ V +A L ++V+ + N Y+ + G+ + ++ +LL +
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGY---NEKQDFEDLLSFIGE 316
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF--------------CIVGQLKE 312
+PD + N ++ LC+ + A + + GF C G +K
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A L E+++K PD Y+++ ++ GL ++G + +L M + G+ ++ T+ ++
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 373 GHCLVSEVNKAKDI 386
G+C + +AK I
Sbjct: 437 GYCKARQFEEAKRI 450
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/462 (19%), Positives = 169/462 (36%), Gaps = 84/462 (18%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMK-HYPTAISLSHQMESSGIISNMVTSS 63
L+ A+ + + + R S F ++ SL + H +ISL + + T +
Sbjct: 544 LQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLN 603
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
L+ YC G + + K+++ + D +T+T+LI+ C + L
Sbjct: 604 FLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQND 663
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
+ D L R+ + V+ +Q + V + I + L +G
Sbjct: 664 NWLPDLNDCGDLWNCLVRKGL----VEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGF 719
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV----- 238
+ A +++++EG+ + +Y +I LC +K + AF + EM+ K+ +P++
Sbjct: 720 SCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLM 779
Query: 239 ------------------------FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAY 274
+ + ALI G + G++ +A L M++ +
Sbjct: 780 LIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNK 839
Query: 275 TFNILVDGLCKEGKVKGAKNVLGVM----------------------------------- 299
+N++ G CK + VLG+M
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 300 ----------MIYGFCIVGQLK-----EATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
+IY I + E ++L EM + + PD TF+ LV G
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSAD 959
Query: 345 VKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ L M+ +G+KPN + ++ C +V KA D+
Sbjct: 960 YSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDL 1001
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 172/423 (40%), Gaps = 51/423 (12%)
Query: 9 VFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINC 68
V +F R+ ++P + L + A S+ ++E G I + LI
Sbjct: 689 VQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKG 748
Query: 69 YCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLD 128
C + AF++L ++L K + P + LI LC + A + + +
Sbjct: 749 LCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS----- 803
Query: 129 QVSYSILT-LKFSRRVISPTPVQRALQFHD--------DVVAQGF-------RLDQV--- 169
V Y+++ L + +++ R + + +V+ QG+ ++++V
Sbjct: 804 YVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGL 863
Query: 170 -----------SYSILINGLCKMGQTKPALQLLR-KIEGKLVQPDVVMYTTIIDSLCKDK 217
SY + +C Q+ A+ L + G+ V++Y +I + + K
Sbjct: 864 MVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAK 923
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFN 277
+ + EM + +LP+ T+ L++G+ + L M++K + P+ +
Sbjct: 924 NHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLR 983
Query: 278 ILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTF----- 332
+ LC G VK A ++ VM G+ + G T++++ +++K P A F
Sbjct: 984 AVTSSLCDNGDVKKALDLWQVMESKGWNL-GSSVVQTKIVETLISKGEIPKAEDFLTRVT 1042
Query: 333 ---------SILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++ L G + A ++L M+K P +Y+S+++G ++++KA
Sbjct: 1043 RNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKA 1102
Query: 384 KDI 386
D
Sbjct: 1103 MDF 1105
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 171 YSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
Y++LI + + ++L +++G+ V PD + ++ + + S M+
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI-LVDGLCKEGKV 289
SK + PN + A+ C G +K+A +L M +K + + +V+ L +G++
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031
Query: 290 KGAKNVL------GVM------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVD 337
A++ L G+M +I G L A LL+ M+ P + ++ +++
Sbjct: 1032 PKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVIN 1091
Query: 338 GLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEV 380
GL + ++ A + M++ G+ P++ T++ L+ C +V
Sbjct: 1092 GLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQV 1134
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 142/327 (43%), Gaps = 24/327 (7%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
++V+ + ++ Y G + A + + G + + +F L+ + Q+Q Q H
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
V+ GF +S +L+ ++ A + D++ + + ++ LI+G
Sbjct: 203 GQVLVAGF----LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI----WTTLISG 254
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN 237
K+G + A +L ++ + + V +T +I + A +L+ +M++ + P
Sbjct: 255 YAKLGDMEAAEKLF----CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 238 VFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLG 297
FT+++ + + L+ E+ M+ N+ P+A + L+D K G ++ ++ V
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 298 V-----------MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV- 345
+ MI G +A +LD+M+ + P+ T ++++ G V
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 346 KGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+G + + ++ G+ P+ Y L+D
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLID 457
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 164/409 (40%), Gaps = 60/409 (14%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
L A++ + R+ + F +LT+ VK + Q+ +G +SN+V S
Sbjct: 160 LHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCS 219
Query: 65 LINCYCHLGQIPFAFSVLAKILKK----------GY-----------------QPDTITF 97
+I+ Y GQ+ A ++ K GY + + +++
Sbjct: 220 IIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSW 279
Query: 98 TTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHD 157
T LI G RAL ++A G + +Q ++S + S ++ + H
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASA----SIASLRHGKEIHG 335
Query: 158 DVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDK 217
++ R + + S LI+ K G + + ++ R + K D V + T+I +L +
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK---HDCVFWNTMISALAQHG 392
Query: 218 LVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTF 276
L A + +M+ R+ PN T ++ G ++E + M V I PD +
Sbjct: 393 LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 277 NILVDGLCKEGKVKG----------------AKNVLGVMMIYGFCIVGQLKEATELLDEM 320
L+D L + G K +LGV I+G +G+ K A EL+
Sbjct: 453 ACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGK-KAADELI--- 508
Query: 321 VTKNIDPDAYTFSILVDGL-CKEGKVKGAKNVLGVMMKQGV-KPNVVTY 367
+DP++ IL+ + GK + + + GVM K+ V K V++
Sbjct: 509 ---KLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSW 554
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 18/227 (7%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
S++ +++G K G A R + + + DVV + T++ +D + +A Y E
Sbjct: 115 SWNNMVSGYVKSGMLVRA----RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
I N F++ L+ QL+ + +++ + ++D K G++
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 290 KGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
+ AK M +I G+ +G ++ A +L EM KN P ++T L+ G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN--PVSWT--ALIAGY 286
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++G A ++ M+ GVKP T++S + ++ + K+I
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 36/304 (11%)
Query: 68 CYCHL------GQIPFAFSVLAKILKKGYQPDTI-TFTTLIKGLCLNAQVQRALQFHDDV 120
C HL Q+ A + +++ G T+ + T ++ LC N ++ RA + +++
Sbjct: 177 CTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM 236
Query: 121 -VAQGFRLDQVSY-SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGL 178
+ +G + + V++ S++ R + L + V+ LD SY +LI+G
Sbjct: 237 GLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVM-----LDLDSYKVLIDGF 291
Query: 179 CKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNV 238
G+ + A +L+ + K ++ + +Y I++ + LV LYSEM S+ + PN
Sbjct: 292 TSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNK 351
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGV 298
TY L+ G C G++ EA L+E+ + D ++ L + +
Sbjct: 352 DTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYR------------- 398
Query: 299 MMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
VG + ++ E++ EM+ P A L D L + + K A+ ++ +++K
Sbjct: 399 --------VGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIVVKC 449
Query: 359 GVKP 362
G+KP
Sbjct: 450 GIKP 453
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 21/198 (10%)
Query: 207 TTIIDSLCKDKLVTDAFNLYSEM-VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
T ++ LC + +T A L EM + K + N+ T+ ++I G C+ E +L+ +++
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLM 272
Query: 266 TKN---IDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVG 308
K +D D+Y +L+DG GKV+ A+ ++ +M ++ G+ G
Sbjct: 273 EKESVMLDLDSY--KVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFG 330
Query: 309 QLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYN 368
+++ EL EM ++ + P+ T+ +L++GLCK GKV A + L + + + Y+
Sbjct: 331 LVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYS 390
Query: 369 SLMDGHCLVSEVNKAKDI 386
+L + V ++K+ ++
Sbjct: 391 TLSEECYRVGMIDKSLEV 408
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 222 AFNLYSEMVSKRI-LPNVFTYTALIYGFCIVGQLKEATELLDEM-VTKNIDPDAYTFNIL 279
A + +S MV I + V++ T ++ C G++ A EL++EM + K + + TF +
Sbjct: 193 ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSM 252
Query: 280 VDGLCKEGKVKGAKNVLGVM--------------MIYGFCIVGQLKEATELLDEMVTKNI 325
+ K + VL +M +I GF G+++EA L+ M K +
Sbjct: 253 IGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKL 312
Query: 326 DPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
++Y ++++++G + G V+ + M +GV PN TY LM+G C +V +A
Sbjct: 313 RVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEA 370
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 166/417 (39%), Gaps = 85/417 (20%)
Query: 1 MSSFLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMV 60
MS +L F P ++ +GKIL A + +E+ S+ +
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPA-TLFLYGKILQLSSSFSDVNYAFRVFDSIENH---SSFM 116
Query: 61 TSSILINCYCHLGQIPFAFSVLAKILKKG-YQPDTITFTTLIKGLCLNAQVQRALQFHDD 119
++++ C + + AF + K+L++G PD TF ++K Q H
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 120 VVAQGFRLD--------QVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSY 171
+V GF D + S L +R+V P +R+L VS+
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSL---------------VSW 220
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS------------------- 212
+ +I+ L + G+ ALQL R+++ + +PD +++ +
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 213 -----LCKDKLVTDAF-NLYSEMVSKRILPNVF---------TYTALIYGFCIVGQLKEA 257
+ D LV ++ +Y + S R+ VF ++ A+I GF G+ +EA
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEA 339
Query: 258 TELLDEMVTK--NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEA-- 313
D MV K N+ P++ TF L+ G V + MM+ +CI L+
Sbjct: 340 MNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFD-MMVRDYCIEPALEHYGC 398
Query: 314 -----------TELLDEMVTKNIDPDAYTFSILVDGLCKEGKV-----KGAKNVLGV 354
TE +D +++ + PDA + L+D CK+G + A+N++G
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGT 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 154 QFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
Q H +V GF D + NGL + + L L RK+ ++ + +V + ++ID+L
Sbjct: 172 QVHCQIVKHGFGGD----VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 214 CKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK---NID 270
+ A L+ EM + P+ +T +++ +G L T ++ K ++
Sbjct: 228 VRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEM 320
D N L++ CK G ++ A+ V M MI GF G+ +EA D M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 321 VTK--NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMD 372
V K N+ P++ TF L+ G V + +M++ ++P + Y ++D
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 171/395 (43%), Gaps = 25/395 (6%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLV-KMKHYPTAISLSHQMESSGIISNMVTS 62
L A+ +++RL+ S F +L + +H + ++ G+ + V
Sbjct: 80 LLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE 139
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVA 122
+ L+ Y G + A V + + D + ++TL+ N +V +AL+ +V
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSCLENGEVVKALRMFKCMVD 195
Query: 123 QGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
G D V+ ++++ + + R++ H + + F LD+ L N L M
Sbjct: 196 DGVEPDAVT--MISVVEGCAELGCLRIARSV--HGQITRKMFDLDET----LCNSLLTMY 247
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
L +I K+ + + V +T +I S + + A +SEM+ I PN+ T
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI-LVDGLCKEGKVKGAKNVLGVM-- 299
+++ ++G ++E + V + +DP+ + ++ LV+ + GK+ + VL V+
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
+I + G + +A L +MVT+ I PDA+T + + G V K +
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 352 LGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G +++ V V NSL+D + V+ A +
Sbjct: 428 HGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTV 461
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 172/389 (44%), Gaps = 61/389 (15%)
Query: 1 MSSFLRL-----AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGI 55
+SS++R A+ +F R+ P S + + +++ ++ + A L +M
Sbjct: 71 ISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLFDEMPER-- 124
Query: 56 ISNMVTSSILINCYC---HLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQR 112
++V+ +++I Y +LG+ F ++ + D ++ T++ G N V
Sbjct: 125 --DLVSWNVMIKGYVRNRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNGCVDD 175
Query: 113 ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYS 172
A D + + + VS++ L + + + ++ A + + L VS++
Sbjct: 176 ARSVFDRMPEK----NDVSWNALLSAY----VQNSKMEEACMLFKS--RENWAL--VSWN 223
Query: 173 ILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSK 232
L+ G K + A Q + + DVV + TII + + +A L+ E
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESP-- 277
Query: 233 RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGA 292
+ +VFT+TA++ G+ ++EA EL D+M +N ++N ++ G + +++ A
Sbjct: 278 --VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMA 331
Query: 293 KNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
K + VM MI G+ G++ EA L D+M + D +++ ++ G +
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQS 387
Query: 343 GKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
G A + M ++G + N +++S +
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 146/353 (41%), Gaps = 27/353 (7%)
Query: 20 PTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAF 79
P + + + +L V+ + A L M N+ T + +I Y G+I A
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAK 363
Query: 80 SVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKF 139
++ K+ K+ D +++ +I G + AL+ + +G RL++ S+S L
Sbjct: 364 NLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS-ALST 418
Query: 140 SRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLV 199
V++ ++ Q H +V G+ + L+ CK G + A L +++ GK
Sbjct: 419 CADVVA---LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-- 473
Query: 200 QPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE 259
D+V + T+I + A + M + + P+ T A++ G + + +
Sbjct: 474 --DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 260 LLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------MIYGFCI-VGQLK 311
M + P++ + +VD L + G ++ A N++ M I+G + ++
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 312 EATELLDEMVTK--NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMK-QGVK 361
TEL + K ++P+ +L+ L G L V M+ +GVK
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 152/338 (44%), Gaps = 25/338 (7%)
Query: 60 VTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDD 119
V SS+L N Y G++ A + K+ K+ D I +TT++ G + +A++F+ +
Sbjct: 153 VCSSVL-NLYMKCGKMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLC 179
+ +GF D+V +L L + + T + R++ H + G ++ V + L++
Sbjct: 208 MQNEGFGRDRVV--MLGLLQASGDLGDTKMGRSV--HGYLYRTGLPMNVVVETSLVDMYA 263
Query: 180 KMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF 239
K+G +++ ++ +++ V + ++I ++ L AF EM S P++
Sbjct: 264 KVG----FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLV 319
Query: 240 TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM 299
T ++ VG LK L+ + K D T L+D K G + ++ + +
Sbjct: 320 TLVGVLVACSQVGSLKTG-RLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHV 378
Query: 300 ----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAK 349
MI + I G +E L +M NI+PD TF+ L+ L G V+ +
Sbjct: 379 GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ 438
Query: 350 NVLGVMM-KQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+ VM+ K ++P+ Y L+D V +A D+
Sbjct: 439 HWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 154 QFHDDVVAQGFRLDQVSYSI-LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDS 212
Q H V++ G L+ S S LI ++G+ A RK+ +L Q V +Y ++I
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYA----RKVFDELPQRGVSVYNSMIVV 90
Query: 213 LCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATE-LLDEMVTKNIDP 271
+ K + LY +M++++I P+ T+T I C+ G + E E + + V
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA-CLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMV 321
D + + +++ K GK+ A+ + G M M+ GF G+ +A E EM
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
+ D L+ G K ++V G + + G+ NVV SL+D
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 32 TSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQ 91
TSLV M I ++ ++ S + V+ LI+ + G AF + ++ G+Q
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ 315
Query: 92 PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQR 151
PD +T ++ ++ H ++ + LD+V+ + L +S+
Sbjct: 316 PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSK--------CG 366
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIID 211
AL ++ R D V ++ +I+ G + + L K+ ++PD + +++
Sbjct: 367 ALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLS 426
Query: 212 SLCKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
+L LV + +S M++K +I P+ Y LI G+++EA ++++ N
Sbjct: 427 ALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNAL 486
Query: 271 P 271
P
Sbjct: 487 P 487
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 130/297 (43%), Gaps = 28/297 (9%)
Query: 63 SILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLN-AQVQRALQFHDDVV 121
+I+I+ + H G++ S+ ++L+ ++PD TF++L+ + + V H ++
Sbjct: 173 NIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML 232
Query: 122 AQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKM 181
G+ V L F ++ S R L+ + L QVS++ +I+ K+
Sbjct: 233 KNGWS-SAVEAKNSVLSFYTKLGSRDDAMRELESIE-------VLTQVSWNSIIDACMKI 284
Query: 182 GQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTY 241
G+T+ AL++ K ++V +TT+I ++ A + EM+ + + F Y
Sbjct: 285 GETEKALEVFHLAPEK----NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAY 340
Query: 242 TALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM-- 299
A+++ + L + ++ AY N LV+ K G +K A G +
Sbjct: 341 GAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN 400
Query: 300 --------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILV-----DGLCKEG 343
M++ F + G +A +L D M+ I PD TF L+ GL +EG
Sbjct: 401 KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 137/331 (41%), Gaps = 34/331 (10%)
Query: 49 QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNA 108
++ES +++ + +SI+ C +G+ A V +K + +T+TT+I G N
Sbjct: 262 ELESIEVLTQVSWNSIIDACM-KIGETEKALEVFHLAPEK----NIVTWTTMITGYGRNG 316
Query: 109 QVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQ 168
++AL+F +++ G D +Y + S + + H ++ GF+
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL----LGHGKMIHGCLIHCGFQGYA 372
Query: 169 VSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSE 228
+ L+N K G K A + G + D+V + T++ + L A LY
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAF----GDIANKDLVSWNTMLFAFGVHGLADQALKLYDN 428
Query: 229 MVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP-DAYTFNILVDGLCKEG 287
M++ I P+ T+ L+ G ++E + + MV P + ++D + G
Sbjct: 429 MIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGG 488
Query: 288 KVKGAK--------------NVLGVMMIYGFCIVGQLKEATELLDEM--VTKNIDP-DAY 330
+ AK N + G C TEL E+ V K +P +
Sbjct: 489 HLAEAKDLATTYSSLVTDSSNNSSWETLLGAC---STHWHTELGREVSKVLKIAEPSEEM 545
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGVK 361
+F +L + C G+ K ++V M+++G+K
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 159/381 (41%), Gaps = 32/381 (8%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMES----SGIISNMVTSS 63
AV +F+ +L + P + +L SLV P A+ Q+ + +G+ SN +
Sbjct: 168 AVGLFSGMLASGDKPPSSMYTTLLKSLVN----PRALDFGRQIHAHVIRAGLCSNTSIET 223
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
++N Y G + A V ++ K +P + T L+ G + + AL+ D+V +
Sbjct: 224 GIVNMYVKCGWLVGAKRVFDQMAVK--KP--VACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
G D +S++ + S + Q H V G + + L++ K
Sbjct: 280 GVEWDSFVFSVVL----KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRI-LPNVFTYT 242
+ A + ++I +P+ V ++ II C+ +A + + SK + N FTYT
Sbjct: 336 FESACRAFQEIR----EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYT 391
Query: 243 ALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM--- 299
++ ++ ++ + + +++ Y + L+ K G + A V M
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP 451
Query: 300 -------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVL 352
I G G EA L ++MV+ + P++ TF ++ G V+ K+ L
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCL 511
Query: 353 GVMMKQ-GVKPNVVTYNSLMD 372
M+++ V P + Y+ ++D
Sbjct: 512 DTMLRKYNVAPTIDHYDCMID 532
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 78 AFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR-LDQVSYSILT 136
+F + ++ +P+ ++++ +I G C +Q + A++ + ++ L+ +Y+ +
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
S V++ + Q H D + + Q S LI K G A ++ ++
Sbjct: 395 QACS--VLADCNI--GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD- 449
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
PD+V +T I ++A L+ +MVS + PN T+ A++ G +++
Sbjct: 450 ---NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
Query: 257 ATELLDEMVTK-NIDPDAYTFNILVDGLCKEG 287
LD M+ K N+ P ++ ++D + G
Sbjct: 507 GKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 109/264 (41%), Gaps = 56/264 (21%)
Query: 151 RALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTII 210
R+L+ D + + L+ VS + +I+ + G A+ L + +P MYTT++
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLL 191
Query: 211 DSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNID 270
SL + + +++ ++ + N T ++ + G L A + D+M K
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKK-- 249
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAY 330
P A T G+M+ G+ G+ ++A +L ++VT+ ++ D++
Sbjct: 250 PVACT---------------------GLMV--GYTQAGRARDALKLFVDLVTEGVEWDSF 286
Query: 331 TFSILVDGLCKEGKVKGAKNVLGVMMKQGV------------------------------ 360
FS+++ ++ K + + K G+
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 361 -KPNVVTYNSLMDGHCLVSEVNKA 383
+PN V++++++ G+C +S+ +A
Sbjct: 347 REPNDVSWSAIISGYCQMSQFEEA 370
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 35/319 (10%)
Query: 60 VTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDD 119
V ++++INCY G I A + + K DT+ +T +I GL N ++ +AL+ +
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIK----DTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 120 VVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQF----HDDVVAQGFRLDQVSYSILI 175
+ +++ VS + T + V+S AL+ H V Q L + LI
Sbjct: 246 M-----QMENVSANEFT---AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALI 297
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
N + G A ++ R + K DV+ Y T+I L +A N + +MV++
Sbjct: 298 NMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGA-- 292
PN T AL+ G L E+ + M N++P + +VD L + G+++ A
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR 413
Query: 293 --KNV--------LGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKE 342
+N+ LG ++ C + E E + + + ++ +PD+ T+ +L +
Sbjct: 414 FIENIPIEPDHIMLGTLL--SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 343 GKVKGAKNVLGVMMKQGVK 361
GK K + + M G++
Sbjct: 472 GKWKESTEIRESMRDSGIE 490
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDG----LCKEGKVK- 290
PNV+ YTA+I GF G+ + L M+ ++ PD Y ++ +C+E +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQV 149
Query: 291 -----GAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKV 345
G+ +G+ M+ + G+L A ++ DEM D D +++++ + G +
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMP----DRDHVAATVMINCYSECGFI 205
Query: 346 KGAKNVLGVMMKQGVK-PNVVTYNSLMDGHCLVSEVNKAKDI 386
K A + Q VK + V + +++DG E+NKA ++
Sbjct: 206 KEALELF-----QDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 114/226 (50%), Gaps = 30/226 (13%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
S++ +++G G K A QL ++ + +VV + ++ K++++ +A N++ E+
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLF----DEMSERNVVSWNGLVSGYIKNRMIVEARNVF-EL 104
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ +R NV ++TA++ G+ G + EA L M +N ++ ++ GL +G++
Sbjct: 105 MPER---NVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRI 157
Query: 290 KGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
A+ + +M MI G C G++ EA + DEM +N+ T++ ++ G
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGY 213
Query: 340 CKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
+ +V A+ + VM ++ V++ S++ G+ L + A++
Sbjct: 214 RQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEE 255
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 47/298 (15%)
Query: 96 TFTTLIKGLCLNAQVQRALQFHDDV----------VAQGF---RLDQVSYSILTLKFSRR 142
++ +++ G N + A Q D++ + G+ R+ + ++ L R
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 143 VISPTPVQRALQFHDDVVAQG----FRL---DQVSYSILINGLCKMGQTKPALQLLRKIE 195
V+S T + + + +V + +R+ ++VS++++ GL G+ A RK+
Sbjct: 110 VVSWTAMVKGY-MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKA----RKLY 164
Query: 196 GKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLK 255
+ DVV T +I LC++ V +A ++ EM + NV T+T +I G+ ++
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVD 220
Query: 256 EATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFC 305
A +L + M K ++ ++ G G+++ A+ VM MI GF
Sbjct: 221 VARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 306 IVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
VG++ +A + D M D D T+ ++ ++G A ++ M KQGV+P+
Sbjct: 277 EVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 36/251 (14%)
Query: 93 DTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFSRRVISPTPVQR 151
D T+ +IK AL + QG R S SIL++ + +Q
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV-----CATLASLQY 349
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIID 211
Q H +V F D S+L+ K G+ A + + K D++M+ +II
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIIS 405
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK-NID 270
L +A ++ EM S +PN T A++ G+L+E E+ + M +K +
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 271 PDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAY 330
P ++ VD L + GQ+ +A EL++ M K PDA
Sbjct: 466 PTVEHYSCTVDMLGR---------------------AGQVDKAMELIESMTIK---PDAT 501
Query: 331 TFSILVDGLCK 341
+ L+ G CK
Sbjct: 502 VWGALL-GACK 511
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 33/333 (9%)
Query: 56 ISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQ 115
+ ++V+ + LIN Y +G+ A V + +G +PD +T L+ + + R +
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
F++ V G R+ + L FS+ + A + D++ + VS++ +I
Sbjct: 279 FYEYVKENGLRMTIPLVNALMDMFSK----CGDIHEARRIFDNLEKRTI----VSWTTMI 330
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
+G + G L + RK+ + + DVV++ +I + K DA L+ EM +
Sbjct: 331 SGYARCG----LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNI-----LVDGLCKEGKVK 290
P+ T + +G L + + I+ + + N+ LVD K G +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGI-----WIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 291 GAKNVLG----------VMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
A +V +I G + G A +EM+ I PD TF L+ C
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 341 KEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMD 372
G ++ ++ M + + P + Y+ ++D
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTI 209
Q AL ++ + D+++ ++ ++G + + R IE + +V + T++
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 210 IDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI 269
+D K +++A +++ + ++ N TYTA+I G + G A +EM+ I
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 486
Query: 270 DPDAYTFNILVDGLCKEGKVKGAKNVLGVM---------------MIYGFCIVGQLKEAT 314
PD TF L+ C G ++ ++ M M+ G L+EA
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD 546
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKV----KGAKNVL 352
L++ M ++ DA + L+ G G V K AK +L
Sbjct: 547 RLMESMP---MEADAAVWGALLFGCRMHGNVELGEKAAKKLL 585
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 186 PALQLLRK----IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM----VSKRIL-- 235
P L LL K + K +Q +++ I+D +L+ AF SE S +IL
Sbjct: 55 PLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI--AFCALSESRYLDYSVKILKG 112
Query: 236 ---PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNI---DPDAYTFNILVDGLCKEGKV 289
PN+F++ I GF KE+ L +M+ PD +T+ +L +C + ++
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFK-VCADLRL 171
Query: 290 KGAKN-VLGVMM--------------IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSI 334
+ +LG ++ I+ F G ++ A ++ DE + D +++
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNC 227
Query: 335 LVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKD 385
L++G K G+ + A V +M +GVKP+ VT L+ ++ ++N+ K+
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 17 RTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIP 76
+T P PS+ I++++ + Y S Q+ G+ + + ++ + + +
Sbjct: 48 QTLPDPSVYT-RDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAW 106
Query: 77 FAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILT 136
F+ A+I KG++ D T+TT++ D+ + R+ Q YS+
Sbjct: 107 LFFNWAAQI--KGFKHDHFTYTTML-----------------DIFGEAGRI-QSMYSVFH 146
Query: 137 LKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEG 196
L + +G +D V+Y+ LI+ + G A++L ++
Sbjct: 147 L---------------------MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRD 185
Query: 197 KLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKE 256
+P VV YT + L D V +A +Y EM+ R+ PN TYT L+ G+ +E
Sbjct: 186 NGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEE 245
Query: 257 ATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
A ++ +M + PD NIL+ K G+ VL M G
Sbjct: 246 ALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 148 PVQRALQFHDDVVA-QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
P+Q+A F + +GF+ D +Y+ +++ + G+ + + ++ K V D V Y
Sbjct: 101 PMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTY 160
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
T++I + V A L+ EM P V +YTA + G+++EATE+ EM+
Sbjct: 161 TSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLR 220
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+ P+ +T+ +L++ L GK +EA ++ +M +
Sbjct: 221 SRVSPNCHTYTVLMEYLVATGKC---------------------EEALDIFFKMQEIGVQ 259
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
PD +IL+ K G+ VL M + GV
Sbjct: 260 PDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 202 DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELL 261
D YTT++D + + ++++ M K +L + TYT+LI+ G + A L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 262 DEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMV 321
+EM +P ++ + L +G+V+ EATE+ EM+
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVE---------------------EATEVYKEML 219
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLM 371
+ P+ +T+++L++ L GK + A ++ M + GV+P+ N L+
Sbjct: 220 RSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 163/396 (41%), Gaps = 54/396 (13%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R I NR+L+ HP M+ + + Q++ G + T +
Sbjct: 85 VRWDSHIINRVLKAHPP---------------MQKAWLFFNWAAQIK--GFKHDHFTYTT 127
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+++ + G+I +SV + +KG DT+T+T+LI + + V A++ +++ G
Sbjct: 128 MLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNG 187
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
VSY+ + + + + V+ A + + +++ + +Y++L+ L G+
Sbjct: 188 CEPTVVSYT----AYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPN------V 238
+ AL + K++ VQPD + C + L+ A R+L V
Sbjct: 244 EEALDIFFKMQEIGVQPD--------KAAC-NILIAKALKFGETSFMTRVLVYMKENGVV 294
Query: 239 FTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKE-------GKVKG 291
Y + + E+ +LL E+ + +I V+ LC +V
Sbjct: 295 LRYPIFVEALETLKAAGESDDLLREVNS----------HISVESLCSSDIDETPTAEVND 344
Query: 292 AKNVLGVMMIYGFCIVGQLKEATE-LLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKN 350
KN +I ++ Q A + LL++M +NI D++ S +++ C + +GA
Sbjct: 345 TKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASL 404
Query: 351 VLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
++ G+ Y +L+ +E+ K ++
Sbjct: 405 AFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEV 440
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 146/345 (42%), Gaps = 41/345 (11%)
Query: 45 SLSH---QMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLI 101
SL H Q+ G++S+ V + L++C L ++ S I + + + LI
Sbjct: 44 SLRHVHAQILRRGVLSSRVAAQ-LVSCSSLLKSPDYSLS----IFRNSEERNPFVLNALI 98
Query: 102 KGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVA 161
+GL NA+ + +++ ++ G + D++++ + S+ + + RAL H +
Sbjct: 99 RGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK--LGFRWLGRAL--HAATLK 154
Query: 162 QGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTD 221
D L++ K GQ K A Q+ + ++ + ++++ +I+ C+ K +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 222 AFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVD 281
A L+ M + N +++ LI G+ G+L A +L + M KN+
Sbjct: 215 ATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV------------ 258
Query: 282 GLCKEGKVKGAKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCK 341
V +I GF G + A EM+ K + P+ YT + ++ K
Sbjct: 259 -------------VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 342 EGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
G + + G ++ G+K + +L+D + E++ A +
Sbjct: 306 SGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N+V+ + LIN + G A S ++L+KG +P+ T ++ + + ++ H
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 118 DDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILING 177
++ G +LD+ + L +++ L V + D +S++ +I G
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAK--------CGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 178 LCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM-VSKRILP 236
G+ A+Q R++ +PD V++ ++ + V N + M + I P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 237 NVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
+ Y ++ G+L EA EL++ M I+PD T+ L CK K
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRA-CKAHK 476
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%)
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
S+S LI G G+ A QL + K +VV +TT+I+ + A + Y EM
Sbjct: 229 SWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 230 VSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKV 289
+ K + PN +T A++ G L + ++ I D LVD K G++
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 290 KGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
A V M MI G+ + G+ +A + +M+ PD F ++
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 340 CKEGKVKGAKNVLGVM-MKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+V N M + ++P + Y ++D ++N+A ++
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
++++ K + + A+ + M G+ N+V + LIN G++ F V + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF-RLDQVSYSILTLKFSRRVISPTP 148
++PD T+ L+ L + + LQ D + ++ L++ Y+ + +
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQK----LGY 405
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
++A++ ++ G + SY+++I+ K ++K AL + + + +P+ Y +
Sbjct: 406 WEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLS 465
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKN 268
++ S L + E + K++ P+V Y A I+G C+ + K A EL +M
Sbjct: 466 LVRSCIWGSLWDEV-----EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMG 520
Query: 269 IDPDAYTFNILVDGLCKEGK 288
++PD T +++ L K K
Sbjct: 521 LEPDGKTRAMMLQNLKKHQK 540
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+ A + +LKKG +P+ + TLI L +V + + + + G + D+ +++
Sbjct: 299 KWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWN 358
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFR-LDQVSYSILINGLCKMGQTKPALQLLR 192
L + + LQ D + ++ L++ Y+ + K+G + A++LL
Sbjct: 359 ALLTALYK----ANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLY 414
Query: 193 KIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVG 252
++EG + Y +I + K + A +Y M + PN FTY +L+ CI G
Sbjct: 415 EMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWG 473
Query: 253 QLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIVGQLKE 312
L + E + K ++PD +N I+G C+ + K
Sbjct: 474 SLWDEVE----DILKKVEPDVSLYNA---------------------AIHGMCLRREFKF 508
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGK 344
A EL +M ++PD T ++++ L K K
Sbjct: 509 AKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 159/379 (41%), Gaps = 25/379 (6%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKIL 86
K L L ++ +A+ L M G+ N + ++C G I AF+V + +
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFM 168
Query: 87 KKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR---LDQVSYSILTLKFSRRV 143
+K T++ ++K + + AL+ ++ + R D V Y+ + R+
Sbjct: 169 RKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNT-AISLCGRI 227
Query: 144 ISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK-IEGKLVQPD 202
+ +R + + G +++YS+L++ + G+++ AL + + + K+ +
Sbjct: 228 NNVYETERIWRV---MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 203 VVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLD 262
MY +I + K++ A ++ M+ K + PN+ LI G++ ++
Sbjct: 285 DAMY-AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS 343
Query: 263 EMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCI---------------V 307
+ + PD YT+N L+ L K + + + ++ C +
Sbjct: 344 VLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKL 403
Query: 308 GQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTY 367
G ++A +LL EM + ++++++ K K K A V M ++ KPN TY
Sbjct: 404 GYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTY 463
Query: 368 NSLMDGHCLVSEVNKAKDI 386
SL+ S ++ +DI
Sbjct: 464 LSLVRSCIWGSLWDEVEDI 482
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 121/290 (41%), Gaps = 24/290 (8%)
Query: 89 GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL-DQVSYSILTLKFSRRVISPT 147
G+ IT++ L+ + + AL +D++V L + Y++++
Sbjct: 244 GHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISA-----CTKEE 298
Query: 148 PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYT 207
AL+ ++ +G + + V+ + LIN L K G+ ++ ++ +PD +
Sbjct: 299 KWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWN 358
Query: 208 TIIDSLCKDKLVTDAFNLYSEMVSKRILP-NVFTYTALIYGFCIVGQLKEATELLDEMVT 266
++ +L K D L+ + S+ + N + Y + +G ++A +LL EM
Sbjct: 359 ALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEG 418
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGA-------------KNVLGVMMIYGFCIVGQLKEA 313
+ ++N+++ K K K A N + + CI G L +
Sbjct: 419 SGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDE 478
Query: 314 TELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
E + K ++PD ++ + G+C + K AK + M + G++P+
Sbjct: 479 VE----DILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 15 LLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSH-QMESSGIISNMVTSSILINCYCHLG 73
+LR + P++ + +L S M + + + H + G+ S++ S LI+ + LG
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGM----SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 74 QIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYS 133
+ A SV +++ D I + ++I G N++ AL+ + GF +Q + +
Sbjct: 209 EPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 134 ILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRK 193
+ R ++ +Q H +V + D + + L++ CK G + AL++ +
Sbjct: 265 SVL----RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 194 IEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQ 253
++ + DV+ ++T+I L ++ +A L+ M S PN T +++ G
Sbjct: 319 MK----ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 254 LKEATELLDEMVT-KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIY 302
L++ M IDP + ++D L K GK+ A +L M +
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 303 GFCIVGQLKEATELLDEMVTKNI---DP-DAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ 358
G C V + +L E K + DP DA T+++L + K + + M +
Sbjct: 435 GACRV----QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Query: 359 GVK 361
G+K
Sbjct: 491 GIK 493
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 133/344 (38%), Gaps = 66/344 (19%)
Query: 70 CHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQ 129
C+ +P A + + G D+ T++ LIK N V + G R
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 130 VSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQ 189
++L + + + A Q D + + +S++ +I+ K + AL+
Sbjct: 97 FLVNVLINMY----VKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALE 148
Query: 190 LLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFC 249
LL + V+P+V Y++++ S C ++D L+ ++ + + +VF +ALI F
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRS-CNG--MSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 250 IVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF----- 304
+G+ ++A + DEMVT DA +N ++ G + + A + M GF
Sbjct: 206 KLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 305 ------------------------------------------CIVGQLKEATELLDEMVT 322
C G L++A + ++M
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 323 KNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVT 366
+ D T+S ++ GL + G + A + M G KPN +T
Sbjct: 322 R----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 27/336 (8%)
Query: 8 AVFIFNRLLRTHPTP-SIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILI 66
A+ +F ++ P P + F + + + ++ ++E SG+ N+V SS L+
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173
Query: 67 NCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
+ Y + A V ++ GY + +++T++I NA+ A++ A
Sbjct: 174 DMYGKCNDVETARRVFDSMI--GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA-ALT 230
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQF----HDDVVAQGFRLDQVSYSILINGLCKMG 182
D+ + +L VIS LQ+ H V G+ + V + L++ K G
Sbjct: 231 SDRANQFMLA-----SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 183 QTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYT 242
A ++ +I V+ YT++I + K L A L+ EMV+ RI PN T
Sbjct: 286 SLSCAEKIFLRIRCH----SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLL 341
Query: 243 ALIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVL----- 296
+++ G + E E L M K + PD+ + +VD L + G+V A +
Sbjct: 342 GVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEV 401
Query: 297 ----GVMMIYGFCIVGQLKEATELLDEMVTKNIDPD 328
G ++ G+L E++ E + I +
Sbjct: 402 GAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 13/299 (4%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
+LR A+ +F+ +L +P +LT P + +GI M S
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
L+N Y G + A V ++ + D ++ ++LI G + +Q D+V
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLP----ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
GF +D S++I ++ + + + + Q H + G + S L+ K G
Sbjct: 647 GFTMD--SFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
+ +I G PD++ +T +I S + +A +Y+ M K P+ T+
Sbjct: 703 IDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 244 LIYGFCIVGQLKEATELLDEMVTK-NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMI 301
++ G ++E+ L+ MV I+P+ + +VD L + G+++ A++ + M I
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 158/399 (39%), Gaps = 62/399 (15%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
A+ +F+R+ P PS++ + +L+ K +A+ + +M SG+ N T + +I+
Sbjct: 304 AMEVFSRI----PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ A V A + K G+ D+ LI + + + Q +D L
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED-------L 412
Query: 128 DQVSY----SILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
D + +++ FS+ S P +A++ ++ +G R D+ S +C +
Sbjct: 413 DDIQRQNIVNVMITSFSQ---SKKP-GKAIRLFTRMLQEGLRTDEFS-------VCSLLS 461
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVF---- 239
L L +++ G ++ +V+ T+ SL F LYS+ S +F
Sbjct: 462 VLDCLNLGKQVHGYTLKSGLVLDLTVGSSL---------FTLYSKCGSLEESYKLFQGIP 512
Query: 240 -----TYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKN 294
+ ++I GF G L+EA L EM+ PD T ++ + K
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 295 V--------------LGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLC 340
+ LG ++ + G LK A ++ D + +DP + S L+ G
Sbjct: 573 IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL--PELDP--VSCSSLISGYS 628
Query: 341 KEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSE 379
+ G ++ + M+ G + +S++ L E
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 53 SGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQR 112
SG++ ++ S L Y G + ++ + I K D + ++I G ++
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMISGFNEYGYLRE 534
Query: 113 ALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTP-VQRALQFHDDVVAQGFRLDQVSY 171
A+ +++ G D+ TL V S P + R + H + G
Sbjct: 535 AIGLFSEMLDDGTSPDES-----TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 172 SILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVS 231
S L+N K G +L+L R++ +L + D V +++I + L+ D F L+ +MV
Sbjct: 590 SALVNMYSKCG----SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 232 KRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKG 291
+ F ++++ +A L DE + AY I GLC E V
Sbjct: 646 SGFTMDSFAISSIL----------KAAALSDES-SLGAQVHAYITKI---GLCTEPSV-- 689
Query: 292 AKNVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
G ++ + G + + + ++ PD ++ L+ + GK A V
Sbjct: 690 -----GSSLLTMYSKFGSIDDCCKAFSQIN----GPDLIAWTALIASYAQHGKANEALQV 740
Query: 352 LGVMMKQGVKPNVVTY 367
+M ++G KP+ VT+
Sbjct: 741 YNLMKEKGFKPDKVTF 756
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 123/307 (40%), Gaps = 26/307 (8%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
+++ Y G + A V ++I P +++T ++ G + AL+ ++ G
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIP----NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQT 184
++ + + + R P+ V A Q H V GF LD + LI+ K G
Sbjct: 347 VEINNCTVTSVISACGR----PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDI 402
Query: 185 KPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTAL 244
+ Q+ ++ + + ++V +I S + K A L++ M+ + + + F+ +L
Sbjct: 403 DLSEQVFEDLD-DIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 245 I-------YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK----VKGAK 293
+ G + G ++ +LD V ++ +T L + K +
Sbjct: 460 LSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL----FTLYSKCGSLEESYKLFQGIPFKD 515
Query: 294 NVLGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
N MI GF G L+EA L EM+ PD T + ++ + K + G
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 354 VMMKQGV 360
++ G+
Sbjct: 576 YTLRAGI 582
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 127/313 (40%), Gaps = 46/313 (14%)
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
L++ Y + G + A AK+ QPD ++ +I G + + +L+F + G
Sbjct: 90 LLSWYSNSGSMADA----AKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLG 145
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDV----VAQGFRLDQVSYSILINGLCK 180
F +++SY VIS +A F + V + G+ +V S LI+ K
Sbjct: 146 FEANEISYG--------SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 181 MGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFT 240
+ + A ++ R + +V + TII +++ F+L+ EM P+ +T
Sbjct: 198 NLRFEDAYKVFRDS----LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 241 YTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMM 300
Y++++ + +L+ +++ V K D + +VD
Sbjct: 254 YSSVLAACASLEKLRFG-KVVQARVIKCGAEDVFVCTAIVD------------------- 293
Query: 301 IYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGV 360
+Y C G + EA E+ + +P ++++++ G K A + M GV
Sbjct: 294 LYAKC--GHMAEAMEVFSRIP----NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV 347
Query: 361 KPNVVTYNSLMDG 373
+ N T S++
Sbjct: 348 EINNCTVTSVISA 360
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 155/343 (45%), Gaps = 25/343 (7%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+LT+LV M + ++ + + N+ S+ +++ Y G++ A + + KK
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK- 307
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVS-YSILTLKFSRRVISPTP 148
D + +TT+I + Q AL+ +++ G + D VS +S+++ + ++
Sbjct: 308 ---DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL---- 360
Query: 149 VQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTT 208
+A H + G + + LIN K G L R + K+ + +VV +++
Sbjct: 361 -DKAKWVHSCIHVNGLESELSINNALINMYAKCG----GLDATRDVFEKMPRRNVVSWSS 415
Query: 209 IIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTK- 267
+I++L +DA +L++ M + + PN T+ ++YG G ++E ++ M +
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 268 NIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFCIV-GQLKEATELLDEM-----V 321
NI P + +VD + ++ A V+ M + ++ G L A + E+
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 322 TKNI---DPDAYTFSILVDGL-CKEGKVKGAKNVLGVMMKQGV 360
K I +PD +L+ + +E + + +N+ VM ++ V
Sbjct: 536 AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 127/303 (41%), Gaps = 22/303 (7%)
Query: 92 PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQR 151
P++I F ++ L +++ + + F+ + G RLDQ S+ L + V + +
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSF----LPILKAVSKVSALFE 129
Query: 152 ALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIID 211
++ H F++ + + G M + + R + ++ DVV + T+I+
Sbjct: 130 GMELH----GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 212 SLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDP 271
C+ LV +AF L+ EM ++P+ ++ G ++ + + ++ ++
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 272 DAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEATELLDEMV 321
D + LV G + A+ M M+ G+ G+L +A + D+
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 322 TKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVN 381
K D ++ ++ + + A V M G+KP+VV+ S++ + ++
Sbjct: 306 KK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 382 KAK 384
KAK
Sbjct: 362 KAK 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 136/318 (42%), Gaps = 41/318 (12%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK--GLCLNAQVQRALQ 115
++VT + +I YC G + AF + ++ PD + ++ G N + RA+
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI- 234
Query: 116 FHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILI 175
++ ++ R+D + L ++ + A +F + + + + ++
Sbjct: 235 -YEFLIENDVRMDTHLLTALVTMYA----GAGCMDMAREFFRKMSVRNLFVS----TAMV 285
Query: 176 NGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRIL 235
+G K G+ A + + E K D+V +TT+I + + +A ++ EM I
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 236 PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNV 295
P+V + ++I +G L +A + I V+GL E + A
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHS--------------CIHVNGLESELSINNA--- 384
Query: 296 LGVMMIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVM 355
++ +Y C G L ++ ++M +N+ ++S +++ L G+ A ++ M
Sbjct: 385 --LINMYAKC--GGLDATRDVFEKMPRRNV----VSWSSMINALSMHGEASDALSLFARM 436
Query: 356 MKQGVKPNVVTYNSLMDG 373
++ V+PN VT+ ++ G
Sbjct: 437 KQENVEPNEVTFVGVLYG 454
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 29/326 (8%)
Query: 54 GIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRA 113
G+ ++ T S LI+ Y G I A V + + + ++ LI G N ++ A
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQN-NLEEA 613
Query: 114 LQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSI 173
+ +++ +G +++++ + + P + QFH + +GF + I
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHK----PESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 174 LINGLC--KMGQTKPALQLLRKIEGKLVQP-DVVMYTTIIDSLCKDKLVTDAFNLYSEMV 230
+ G+ G T+ + +L P +V++T ++ ++ +A Y EM
Sbjct: 670 SLLGMYMNSRGMTEAC-----ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 231 SKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVK 290
+LP+ T+ ++ ++ L+E + + D D T N L+D K G +K
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 291 GAKNVLGVM-----------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGL 339
G+ V M +I G+ G ++A ++ D M +I PD TF ++
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 340 CKEGKVKGAKNVLGVMMKQ-GVKPNV 364
GKV + + +M+ Q G++ V
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARV 870
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 153/363 (42%), Gaps = 70/363 (19%)
Query: 32 TSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQ 91
+SL+ M I + ++ SS ++V+ + LI Y + A + ++L +G
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVN 626
Query: 92 PDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGF--RLDQVSYSILTLKFSRR------- 142
P ITF T+++ + QFH + +GF + + S+L + + R
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 143 ----VISPTPV----------------QRALQFHDDVVAQGFRLDQVSYSILINGLCKMG 182
+ SP + + AL+F+ ++ G DQ ++ ++ +C +
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR-VCSV- 744
Query: 183 QTKPALQLLRKIEGKLVQP---------DVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
L LR EG+ + D + T+ID K + + ++ EM R
Sbjct: 745 -----LSSLR--EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM---R 794
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
NV ++ +LI G+ G ++A ++ D M +I PD TF ++ GKV +
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 294 NVLGVMM-IYGF--------CIV------GQLKEATELLDEMVTKNIDPDAYTFSILVDG 338
+ +M+ YG C+V G L+EA + ++ +N+ PDA +S L+ G
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE---AQNLKPDARLWSSLL-G 910
Query: 339 LCK 341
C+
Sbjct: 911 ACR 913
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 157/383 (40%), Gaps = 38/383 (9%)
Query: 8 AVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILIN 67
AV +F R+ P + F ++ + +++ A L +M S ++V +++I+
Sbjct: 245 AVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP----DVVAWNVMIS 300
Query: 68 CYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRL 127
+ G A + K + T +++ + + A + L H + + G
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 128 DQVSYSILTLKFSR--RVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTK 185
+ S L +S+ ++ + V AL+ +DV ++ +I G G++
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF----------WNAMIRGYAHNGESH 410
Query: 186 PALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALI 245
++L ++ D +T+++ + + +S ++ K++ N+F AL+
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 246 YGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF- 304
+ G L++A ++ + M D D T+N ++ ++ A ++ M + G
Sbjct: 471 DMYAKCGALEDARQIFERMC----DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 305 ----CIVGQLKEATELLDEMVTKNI---------DPDAYTFSILVDGLCKEGKVKGAKNV 351
C+ LK T + K + D D +T S L+D K G +K A+ V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 352 LGVMMKQGVKPNVVTYNSLMDGH 374
+ + +VV+ N+L+ G+
Sbjct: 587 FSSLPEW----SVVSMNALIAGY 605
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 159/393 (40%), Gaps = 37/393 (9%)
Query: 4 FLRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
FL V +N +L + SI + GK+L S V + +Q I N T S
Sbjct: 120 FLEKDVTAWNSMLSMYS--SIGKPGKVLRSFVSL--------FENQ-----IFPNKFTFS 164
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
I+++ + F + ++K G + ++ L+ ++ A + + +V
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
+ V ++ L FS V + P + L F + + +G R D +++ +IN ++G+
Sbjct: 225 ----NTVCWTCL---FSGYVKAGLPEEAVLVF-ERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
K A R + G++ PDVV + +I K T A + M + T +
Sbjct: 277 LKDA----RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM---- 299
++ IV L + E + + + Y + LV K K++ A V +
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 300 ------MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLG 353
MI G+ G+ + EL +M + + D +TF+ L+ ++
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 354 VMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
+++K+ + N+ N+L+D + + A+ I
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 137/338 (40%), Gaps = 59/338 (17%)
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR--RVISP- 146
Y+P+ + LI L Q ++A + +++ +G ++ Y+ L +SR R +
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 147 TPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMY 206
T ++R H+ + D +YSILI ++ LL + + ++P+ + Y
Sbjct: 206 TLLERMKSSHN------CQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 259
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMV 265
T+ID+ K K+ + + +M+ + P+ +T + + F GQ++ ++
Sbjct: 260 NTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQ 319
Query: 266 TKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIY--------------GFCIVGQLK 311
+ I+P+ TFNIL+D K G K V+ M Y F G LK
Sbjct: 320 SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK 379
Query: 312 EATELLDEMVTKNIDPDAYT-----------------------------------FSILV 336
+ L M ++ I P T F+ LV
Sbjct: 380 QMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 439
Query: 337 DGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGH 374
D + K K VL +M K+G KP+ +TY +++ +
Sbjct: 440 DAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 188 LQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYG 247
+LLR E +P+V +Y +I L K K A L+ EM+++ + N YTAL+
Sbjct: 137 FELLR--EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 248 FCIVGQLKEATELLDEM-VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGFC- 305
+ G+ A LL+ M + N PD +T++IL+ + +++L M G
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 306 ----------IVGQLKEATELLDEMV----TKNIDPDAYTFSILVDGLCKEGKVKGAKNV 351
G+ K E+ ++ + PD++T + + G+++ +N
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 352 LGVMMKQGVKPNVVTYNSLMDGH 374
G++PN+ T+N L+D +
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSY 337
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 14/284 (4%)
Query: 27 FGKILTSLVKMKHYPTAISLSHQMESS-GIISNMVTSSILINCYCHLGQIPFAFS----V 81
+ ++++ + + A +L +M+SS ++ T SILI + + FAF +
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQV----FAFDKVQDL 243
Query: 82 LAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSR 141
L+ + ++G +P+TIT+ TLI + + ++ ++ Q D T+ +
Sbjct: 244 LSDMRRQGIRPNTITYNTLIDAY---GKAKMFVEMESTLI-QMLGEDDCKPDSWTMNSTL 299
Query: 142 RVISPT-PVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQ 200
R ++ ++ + G + +++IL++ K G K ++ ++
Sbjct: 300 RAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYS 359
Query: 201 PDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATEL 260
+V Y +ID+ + + L+ M S+RI P+ T +L+ + + + +
Sbjct: 360 WTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGV 419
Query: 261 LDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYGF 304
L + +I D FN LVD + K K VL +M GF
Sbjct: 420 LRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGF 463
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 142/361 (39%), Gaps = 59/361 (16%)
Query: 30 ILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKG 89
+L +LV+ K + + + Q+ G + VT SIL+ +C G++ A L +L
Sbjct: 223 LLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPND 281
Query: 90 YQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPV 149
L+ LC + Q A + D++ +++ +
Sbjct: 282 PAGCGSGLGILVDALCSKRKFQEATKLLDEI---------------------KLVGTVNM 320
Query: 150 QRALQFHDDVVAQGFRLDQVSYSILINGLCKMG-QTKPA--LQLLRKIEGKLVQPDVVMY 206
RA Y+I I L K G PA LQ + +EG + +V Y
Sbjct: 321 DRA------------------YNIWIRALIKAGFLNNPADFLQKISPLEG--CELEVFRY 360
Query: 207 TTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT 266
+++ L K+ + +++ +EM+ + + PN T A + FC G + EA EL
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 267 KNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKE 312
P A ++N L+ LC V+ A +VL + G C G+
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 313 ATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMD 372
A EL+ +++ P ++ LC GKV+ A + + K GV + + SL+
Sbjct: 481 ARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIY 540
Query: 373 G 373
G
Sbjct: 541 G 541
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 137/349 (39%), Gaps = 27/349 (7%)
Query: 43 AISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIK 102
A+ L G ++ + LI+ C + A+ VL + +G+ TF+TL
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 103 GLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQ 162
LC + A + V+A R D + I K + V+ AL ++
Sbjct: 471 ALCWKGKPDMAREL---VIAAAER-DLLPKRIAGCKIISALCDVGKVEDALMINELFNKS 526
Query: 163 GFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDA 222
G ++ LI G + + A +L+ +++ K P +Y +I +C+ + +
Sbjct: 527 GVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE--MESGE 584
Query: 223 FNLYSEMVSKRIL---PNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNIL 279
N ++ ++ ++ V Y I G G+ K A + D M I P + ++
Sbjct: 585 KNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILM 644
Query: 280 VDGLCKEGKVKGA-------------KNVLGVMMIYGFCIVGQLKEATELLDEMVTKNID 326
+ K K+ A K L +MI G C +L +A L+EM + +
Sbjct: 645 LQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQ 704
Query: 327 PDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVK-----PNVVTYNSL 370
P + + + LC E K A ++ K G + NV+ +N++
Sbjct: 705 PSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAM 753
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 174 LINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKR 233
L+ G G+T ALQ + + + D Y ++++L ++K D+F++ + +S R
Sbjct: 188 LVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCF-DSFDVIFDQISVR 246
Query: 234 ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAK 293
T++ L+ FC G+L EA + L ++ + ILVD LC + K + A
Sbjct: 247 GFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEAT 306
Query: 294 NVLGVMMIYG--------------FCIVGQLKEATELLDEMVT-KNIDPDAYTFSILVDG 338
+L + + G G L + L ++ + + + + ++ +V
Sbjct: 307 KLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQ 366
Query: 339 LCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKAKDI 386
L KE + G ++L MM +GV PN T N+ + C V++A ++
Sbjct: 367 LLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALEL 414
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 20/303 (6%)
Query: 99 TLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDD 158
L+ G + + ALQ ++ +G LD Y +L ++ D
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLL----NALVEEKCFDSFDVIFDQ 242
Query: 159 VVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKL 218
+ +GF + V++SIL+ CK G+ A LR + ++D+LC +
Sbjct: 243 ISVRGF-VCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRK 301
Query: 219 VTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEMVT-KNIDPDAYTFN 277
+A L E+ + Y I G L + L ++ + + + + +N
Sbjct: 302 FQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYN 361
Query: 278 ILVDGLCKEGKVKGAKNVLGVMMIYG--------------FCIVGQLKEATELLDEMVTK 323
+V L KE + G ++L MM+ G FC G + EA EL
Sbjct: 362 SMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEI 421
Query: 324 NIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPNVVTYNSLMDGHCLVSEVNKA 383
P A +++ L+ LC V+ A +VL + +G T+++L + C + + A
Sbjct: 422 GFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMA 481
Query: 384 KDI 386
+++
Sbjct: 482 REL 484
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 74/328 (22%)
Query: 22 PSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSILINCYCHLGQIPFAFSV 81
P I KI+++L + A+ ++ SG+ ++ + LI L + A +
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 82 LAKILKKGYQPDTITFTTLIKGLC-----------------LNAQVQRALQFHDDVVAQG 124
+ ++ +KGY P + +I+ +C L+ + ++ + G
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAG 614
Query: 125 F----RLDQVSYSILTLKFSRRVISPT---------------PVQRALQFHDDVVAQGFR 165
F +L ++ Y ++ R I+PT + AL F D+ QG +
Sbjct: 615 FAGKPKLARLVYDMM----DRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-K 669
Query: 166 LDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNL 225
+ Y ++I GLCK + A+ L +++G+ +QP + Y I LC ++ +A L
Sbjct: 670 TKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL 729
Query: 226 YSEM--VSKRI---LPNVFTYTAL----IYGFCI--------VGQLKEATEL-------- 260
+E +RI + NV + A+ +Y + ++K EL
Sbjct: 730 VNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRI 789
Query: 261 --------LDEMVTKNIDPDAYTFNILV 280
LDE++ K D YT+N+L+
Sbjct: 790 DMEVELKRLDEVIEKCYPLDMYTYNMLL 817
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 126/299 (42%), Gaps = 21/299 (7%)
Query: 86 LKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFRLDQVSY-SILTLKFSRRVI 144
L +G + D++++ +IKGL N + A++ ++ QG ++DQ + S+L
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA-----CG 281
Query: 145 SPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVV 204
+ Q H ++ F+ S LI+ CK L + + ++ Q +VV
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC----KCLHYAKTVFDRMKQKNVV 337
Query: 205 MYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIYGFCIVGQLKEATELLDEM 264
+T ++ + +A ++ +M I P+ +T I V L+E ++ +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 265 VTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM----------MIYGFCIVGQLKEAT 314
+T + N LV K G + + + M M+ + G+ E
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 315 ELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQ-GVKPNVVTYNSLMD 372
+L D+MV + PD T + ++ + G V+ + +M + G+ P++ Y+ ++D
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 150/375 (40%), Gaps = 38/375 (10%)
Query: 11 IFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGII---SNMVTSSILIN 67
+F+R+ P P++ + +L + K L +MES+ + VT ++LI
Sbjct: 63 VFDRI----PQPNLFSWNNLLLAYSKA-------GLISEMESTFEKLPDRDGVTWNVLIE 111
Query: 68 CYCHLGQIPFAFSVLAKILKK-GYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQGFR 126
Y G + A +++ +T T++K N V Q H V+ GF
Sbjct: 112 GYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE 171
Query: 127 LDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQTKP 186
+ S L ++ V + ++ DD + V Y+ L+ GL G +
Sbjct: 172 SYLLVGSPLLYMYA-NVGCISDAKKVFYGLDD-------RNTVMYNSLMGGLLACGMIED 223
Query: 187 ALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTALIY 246
ALQL R +E D V + +I L ++ L +A + EM + + + + + +++
Sbjct: 224 ALQLFRGME-----KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 247 GFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVM------- 299
+G + E ++ ++ N Y + L+D CK + AK V M
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 300 ---MIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMM 356
M+ G+ G+ +EA ++ +M IDPD YT + ++ G +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 357 KQGVKPNVVTYNSLM 371
G+ V NSL+
Sbjct: 399 TSGLIHYVTVSNSLV 413
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 28/245 (11%)
Query: 58 NMVTSSILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFH 117
N+V+ + ++ Y G+ A + + + G PD T I + ++ QFH
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 118 DDVVAQGF-RLDQVSYSILTL-------KFSRRVISPTPVQRALQFHDDVVAQGFRLDQV 169
+ G VS S++TL S R+ + V+ D V
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----------------DAV 438
Query: 170 SYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEM 229
S++ +++ + G+ +QL K+ ++PD V T +I + + LV + M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 230 VSKR-ILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGK 288
S+ I+P++ Y+ +I F G+L+EA ++ M PDA + L+ +G
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGN 555
Query: 289 VKGAK 293
++ K
Sbjct: 556 LEIGK 560
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 52/313 (16%)
Query: 5 LRLAVFIFNRLLRTHPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSSI 64
+R A +F+ + P I + ++++ ++ +A SL++QM N TS+
Sbjct: 920 IREARKVFDEM----PERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNC 971
Query: 65 LINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQG 124
LIN Y LG + A S+ ++ K D I++TT+IKG N + + A+ ++ +G
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 125 FRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLD----------------- 167
D+V+ S + + + ++ + H + GF LD
Sbjct: 1028 IIPDEVTMSTVISACAHLGV----LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Query: 168 --------------QVSYSILINGLCKMGQTKPALQLLRKIEGKLVQPDVVMYTTIIDSL 213
++ +I GL G + AL++ K+E + V+P+ V + ++ +
Sbjct: 1084 ERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 1143
Query: 214 CKDKLVTDAFNLYSEMVSK-RILPNVFTYTALIYGFCIVGQLKEATELLDEMVTKNIDPD 272
LV + +Y M+ I+ NV Y +++ F G + EA EL+ M +P+
Sbjct: 1144 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPN 1200
Query: 273 AYTFNILVDGLCK 285
A + L+DG C+
Sbjct: 1201 AVIWGALLDG-CR 1212
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 154/367 (41%), Gaps = 68/367 (18%)
Query: 9 VFIFNRLLR-----THPTPSIIEFGKILTSLVKMKHYPTAISLSHQMESSGIISNMVTSS 63
VF++N L + +HP S+ + ++L V P++ + S +++S S
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS----PSSYTYSSLVKASSFASR----- 886
Query: 64 ILINCYCHLGQIPFAFSVLAKILKKGYQPDTITFTTLIKGLCLNAQVQRALQFHDDVVAQ 123
F S+ A I K G+ TTLI +++ A + D++ +
Sbjct: 887 -------------FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER 933
Query: 124 GFRLDQVSYSILTLKFSRRVISPTPVQRALQFHDDVVAQGFRLDQVSYSILINGLCKMGQ 183
D ++++ + + RRV+ + + + Q ++ + + LING +G
Sbjct: 934 ----DDIAWTTMVSAY-RRVLD-------MDSANSLANQMSEKNEATSNCLINGYMGLGN 981
Query: 184 TKPALQLLRKIEGKLVQPDVVMYTTIIDSLCKDKLVTDAFNLYSEMVSKRILPNVFTYTA 243
+ A L ++ K D++ +TT+I ++K +A ++ +M+ + I+P+ T +
Sbjct: 982 LEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 244 LIYGFCIVGQLKEATELLDEMVTKNIDPDAYTFNILVDGLCKEGKVKGAKNVLGVMMIYG 303
+I +G L+ E+ + D Y + LVD +Y
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD-------------------MYS 1078
Query: 304 FCIVGQLKEATELLDEMVTKNIDPDAYTFSILVDGLCKEGKVKGAKNVLGVMMKQGVKPN 363
C G L+ A + + KN+ + ++ +++GL G + A + M + VKPN
Sbjct: 1079 KC--GSLERALLVFFNLPKKNL----FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 1132
Query: 364 VVTYNSL 370
VT+ S+
Sbjct: 1133 AVTFVSV 1139