Miyakogusa Predicted Gene

Lj1g3v2570520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2570520.1 tr|D8LVY6|D8LVY6_BLAHO Singapore isolate B
(sub-type 7) whole genome shotgun sequence assembly,
scaf,24.61,7e-16,seg,NULL; coiled-coil,NULL; Tricorn protease domain
2,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAM,CUFF.29154.1
         (411 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54190.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   718   0.0  
AT2G38630.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   696   0.0  

>AT3G54190.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr3:20061759-20063880 REVERSE LENGTH=467
          Length = 467

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/411 (83%), Positives = 374/411 (90%), Gaps = 4/411 (0%)

Query: 1   MRLTQQYDTHDPKGXXXXXXXXXXXMKRTKVVEIVAAKDIVFALAHSGLCAAFSRETNER 60
           MRL +QYDTHDPKG           MKRTKV+EIVAA+DIVFALAHSG+CAAFSRE+N+R
Sbjct: 61  MRLVEQYDTHDPKGHCLVALPFL--MKRTKVIEIVAARDIVFALAHSGVCAAFSRESNKR 118

Query: 61  ICLLNVCPDEVIRSLFYNKNNDSLITVSVYASESFSSLKCRSTRIEYIRRAKPDAGFPLF 120
           IC LNV PDEVIRSLFYNKNNDSLITVSVYAS++FSSLKCRSTRIEYI R +PDAGF LF
Sbjct: 119 ICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFALF 178

Query: 121 QSESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDRNVQEIKISPGIML 180
           +SESLKWPGFVEFDDVNGKVLTYSAQDS+YKVFDLKNYTMLYSISD+NVQEIKISPGIML
Sbjct: 179 ESESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKNYTMLYSISDKNVQEIKISPGIML 238

Query: 181 LIFNRTSGYIPLKIISIEDGTVLKTFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV 240
           LIF R + ++PLKI+SIEDGTVLK+FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV
Sbjct: 239 LIFKRAASHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV 298

Query: 241 RNAELMEVSKTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCN 300
           RNAELMEVS+ EFMTPSAFIFLYENQLFLTFRNR V+VWNFRGELVTSFEDHLLWHPDCN
Sbjct: 299 RNAELMEVSRAEFMTPSAFIFLYENQLFLTFRNRNVSVWNFRGELVTSFEDHLLWHPDCN 358

Query: 301 TNNIYITSDQDLIISYCKADSEDQWMEGNAGSINISNILTGKCVAKINAANTCTKVDECS 360
           TNNIYITSDQDLIISYCKAD+EDQW+EGNAGSINISNILTGKC+AKI  ++   K DE S
Sbjct: 359 TNNIYITSDQDLIISYCKADTEDQWIEGNAGSINISNILTGKCLAKITPSSGPPKDDESS 418

Query: 361 CTACSCKQTHSSQIRSSVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 411
            + C  K  +S Q R++VAEALEDITALFYDE+RNEIYTGNRHGLVHVWSN
Sbjct: 419 SSNCMGK--NSKQRRNAVAEALEDITALFYDEERNEIYTGNRHGLVHVWSN 467


>AT2G38630.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr2:16154283-16156302 REVERSE LENGTH=467
          Length = 467

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/411 (81%), Positives = 372/411 (90%), Gaps = 6/411 (1%)

Query: 1   MRLTQQYDTHDPKGXXXXXXXXXXXMKRTKVVEIVAAKDIVFALAHSGLCAAFSRETNER 60
           MRL +QYDTHDPKG           +KR+KV+EIVAA+DIVFAL  SG+CA+FSRETN++
Sbjct: 63  MRLVEQYDTHDPKGYCLVSLPNL--LKRSKVIEIVAARDIVFALTLSGVCASFSRETNKK 120

Query: 61  ICLLNVCPDEVIRSLFYNKNNDSLITVSVYASESFSSLKCRSTRIEYIRRAKPDAGFPLF 120
           +C LNV PDEVIRSLFYNKNNDSLITVSVYAS+++SSLKCRSTRIEYI R + DAGFPLF
Sbjct: 121 VCFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNYSSLKCRSTRIEYILRGQADAGFPLF 180

Query: 121 QSESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDRNVQEIKISPGIML 180
           +SESLKWPGFVEFDDVNGKVLTYSAQDS+YKVFDLKNY +LYSISD+NVQEIKISPGIML
Sbjct: 181 ESESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKNYALLYSISDKNVQEIKISPGIML 240

Query: 181 LIFNRTSGYIPLKIISIEDGTVLKTFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV 240
           LIF R + ++PLKI+SIEDGT+LK+F+HLLHRNKKVDFIEQFNEKLLVKQENENLQILDV
Sbjct: 241 LIFKRAASHVPLKILSIEDGTLLKSFHHLLHRNKKVDFIEQFNEKLLVKQENENLQILDV 300

Query: 241 RNAELMEVSKTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCN 300
           RNAEL+EVS+T+FMTPSAFIFLYENQLFLTFRNR V+VWNFRGELVTSFEDHLLWHPDCN
Sbjct: 301 RNAELIEVSRTDFMTPSAFIFLYENQLFLTFRNRNVSVWNFRGELVTSFEDHLLWHPDCN 360

Query: 301 TNNIYITSDQDLIISYCKADSEDQWMEGNAGSINISNILTGKCVAKINAANTCTKVDECS 360
           TNNIYITSDQDLIISYCKAD+EDQW+EGNAGSINISNILTGKC+AKI A N   K ++CS
Sbjct: 361 TNNIYITSDQDLIISYCKADTEDQWIEGNAGSINISNILTGKCLAKIKANNGPPKEEDCS 420

Query: 361 CTACSCKQTHSSQIRSSVAEALEDITALFYDEDRNEIYTGNRHGLVHVWSN 411
               S    +SS+ RS+VAEALEDITALFYDE+RNEIYTGNRHGL+HVWSN
Sbjct: 421 ----SSDLGNSSRRRSAVAEALEDITALFYDEERNEIYTGNRHGLLHVWSN 467