Miyakogusa Predicted Gene

Lj1g3v2559440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2559440.1 Non Chatacterized Hit- tr|G7KZ72|G7KZ72_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.53,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.29171.1
         (759 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23590.1 | Symbols: RFR1, MED33A | REF4-related 1 | chr3:8467...   486   e-137
AT2G48110.1 | Symbols: REF4, MED33B | reduced epidermal fluoresc...   363   e-100

>AT3G23590.1 | Symbols: RFR1, MED33A | REF4-related 1 |
           chr3:8467638-8473469 FORWARD LENGTH=1309
          Length = 1309

 Score =  486 bits (1252), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/776 (36%), Positives = 447/776 (57%), Gaps = 46/776 (5%)

Query: 1   MCFEKDHPSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRSHPHAYALFLPLLDQHVFS 60
           +C++ + P +WKF+  A++ +LV PL +L+LL+ +V+P R +   AY ++L LL +++F+
Sbjct: 58  ICWDNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFT 117

Query: 61  FQPTGSVSCNLRIISSVDSSLQLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWGLQ 120
            +   S     +++ SV + L+LSE + +   + G + V F F ++  L+D+ L D GL 
Sbjct: 118 IKDHISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLL 177

Query: 121 VTFDERSCLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKATIL 180
               + S       Q MEID    +N +K+   E+++  N+  A+E++     +     L
Sbjct: 178 ELSQDSSSQWLVKSQDMEIDAPERYN-EKTGSLEKLQSLNTIMAIELIAEFLRNTVIARL 236

Query: 181 LQSVLLNMPEKFNCLRQRLQFXXXXXXXXXXXXXVNPV-LTKMSANIRGVSNFDYCLNKH 239
           L  V  N   K++   Q++Q              +N   L ++ +N R   ++D  +   
Sbjct: 237 LYLVSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSA 296

Query: 240 QLVGKLVDVGPCKTLLRYSYRSFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLTEQIKTL 299
           +    +VD G   +     + +  S  W+PLD+  E+AMD  Q+   S+I+++T   KTL
Sbjct: 297 RKSNAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTL 356

Query: 300 QIINQASWQETFLALWLSALRLVQRERDPPEGPIPHLEARLCVLLSIVPLAIVNVLKEDS 359
           + IN ++W +TFL LW++ALRLVQRERDP EGPIP L+ RLC+ L IVPL + N+++E  
Sbjct: 357 KEINGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEE-- 414

Query: 360 KHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVEVLGHFSSLLCPPALVVDPANQAARKA 419
                  +  ME     ++++D      L++S++VLG F  LL PP  VV  AN+AA KA
Sbjct: 415 ----GKYESVME-----KLRDD------LVTSLQVLGDFPGLLAPPKCVVSAANKAATKA 459

Query: 420 ARFI---------YNSTNKNGEPVTGIHANSNTKAGGNLRHLIVEACIARNLMDTSVYFW 470
             F+         ++  N    PV            GN+RHLIVEACIARN++D S Y W
Sbjct: 460 ILFLSGGNVGKSCFDVINMKDMPV---------NCSGNMRHLIVEACIARNILDMSAYSW 510

Query: 471 PGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPASSLAEIEKLYFIALNG 530
           PGYV                 W +F++G PLN +++N+L   PASSLAE+EKL+ +A+ G
Sbjct: 511 PGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKG 570

Query: 531 TEVERPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGHSGSWSLLVDNMSMLSAV 590
           ++ E+ +AA +LC ASL+RGW IQEH V Y+ +LL+ PVP  +S + + L+    ML+ V
Sbjct: 571 SDDEKISAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVV 630

Query: 591 LRGASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPNSINTGDEPSTSTYMAYMAFSL 650
           + G  SVD++ I SLHG+VP +A SL+P+CE FGS TP+   T   PS     AY  FS 
Sbjct: 631 IVGIGSVDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWT--LPSGEAISAYSVFSN 688

Query: 651 AFLFLIRLWKFCRPPLDQGITEEGIAVGGL--EYLLSLHNNRVMSSQ--DKLESNQSLFE 706
           AF  L++LW+F  PP++ G+ +       L  E+LLS+ N+ ++SS+  D+  + + L E
Sbjct: 689 AFTLLLKLWRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSE 748

Query: 707 ---SASVKPVCIDSFPKLRALYCQYKSCVASALSGLSTGNSIHQTATLILSMIYQK 759
              +AS +PV +DSFPKL+  Y Q++ C+A+ LSGL+ G+ +HQT   +L+M + K
Sbjct: 749 VARAASCQPVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGK 804


>AT2G48110.1 | Symbols: REF4, MED33B | reduced epidermal
           fluorescence 4 | chr2:19673370-19679494 FORWARD
           LENGTH=1275
          Length = 1275

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 271/787 (34%), Positives = 395/787 (50%), Gaps = 110/787 (13%)

Query: 3   FEKDHPSMWKFMSHALSSRLVFPLQILSLLSSKVIPRRRSHPHAYALFLPLLDQHVFSFQ 62
           +E   P  WK +  A+S  +V PL +L+LLS +VIP R+ HP AY L++ LL +H FSF 
Sbjct: 61  WENHSPLSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFM 120

Query: 63  PTGSVSCNLRIISSVDSSLQLSETYKIHDLELGHVFVLFFFNIIIALIDSTLDDWGLQVT 122
           P        + ++S+D  L LSET+ + D E G + + F F+I+  L+D++L        
Sbjct: 121 PLIRAPGYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASL-------- 172

Query: 123 FDERSCLVPTGDQYMEIDHNVTHNFKKSEYHEQIRKRNSFTALEVLERLTASRKATILLQ 182
            DE   L  T ++  +   +  H+         +++  +  ALE       +  A  L+Q
Sbjct: 173 -DEEGLLELTSNKRSKWPSS-PHDMDLDGLENSVKRNENHDALEKAN----TEMAIELIQ 226

Query: 183 SVLLNMPEKFNCLRQRLQFXXXXXXXXXXXXXVNPVLTKMSANIRGVSNFDYCLNKHQLV 242
             L N                                 K+++ I         L    + 
Sbjct: 227 EFLQN---------------------------------KVTSRI-------LHLASQNME 246

Query: 243 GKLVDVGPCKTLLRYSYR---SFQSPCWVPLDIYMENAMDSRQIPIKSSIDVLTEQIKTL 299
            K +  G    ++    +   +  S  W+P+D++ E+ MD  Q    S+++ LT  +K L
Sbjct: 247 SKTIPRGEFHAIVSSGSKLALTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKAL 306

Query: 300 QIINQASWQETFLALWLSALRLVQRE-------------------RDPPEGPIPHLEARL 340
           Q  N  SW + FLALWL+ALRLVQRE                   RDP EGP+P  +  L
Sbjct: 307 QAANSTSWHDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFL 366

Query: 341 CVLLSIVPLAIVNVLKEDSKHNPSSVQMSMESGYSHEMKNDGSGKLGLISSVEVLGHFSS 400
           CVLLS+ PLA+ N+++E+       +  +  S  +   +  G  + GLI+S++ LG + S
Sbjct: 367 CVLLSVTPLAVANIIEEEESQ---WIDQTSSSPSNQWKEKKGKCRQGLINSLQQLGDYES 423

Query: 401 LLCPPALVVDPANQAARKAARFIYNSTNKNGEPVTGIHANSNTKAGGNLRHLIVEACIAR 460
           LL PP  V   ANQAA KA  FI   TN NG      + N++     +        C  R
Sbjct: 424 LLTPPRSVQSVANQAAAKAIMFISGITNSNGS-----YENTSMSESAS------GCCKVR 472

Query: 461 NLMDTSVYFWPGYVXXXXXXXXXXXXXXXXPWLTFMEGTPLNNSLINSLTVTPASSLAEI 520
             + T   F                      W   M+G+PL  SL NSL  TPASSLAEI
Sbjct: 473 FSLFTLKMF---------VVMGVYLLCNISCWSLVMKGSPLTPSLTNSLITTPASSLAEI 523

Query: 521 EKLYFIALNGTEVERPAAAKILCSASLSRGWYIQEHVVHYVVKLLASPVPLGHSGSWSLL 580
           EK+Y +A  G+E E+ A A ILC ASL RGW IQEHV+ ++V LL+ P P   SGS+S L
Sbjct: 524 EKMYEVATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHL 583

Query: 581 VDNMSMLSAVLRGASSVDTVHILSLHGVVPTVAASLLPLCEAFGSITPNSINTGDEPSTS 640
           +++   L+ +L G S +D VHI SLHGVVP +A +L+P+CEAFGS  PN   T   P+  
Sbjct: 584 INSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNI--TWTLPTGE 641

Query: 641 TYMAYMAFSLAFLFLIRLWKFCRPPLDQGITEEGIAVG---GLEYLLSLHNNRV----MS 693
              ++  FS AF  L+RLW+F  PPLD  +  +   VG     EYLL + N R+     S
Sbjct: 642 LISSHAVFSTAFTLLLRLWRFDHPPLDY-VLGDVPPVGPQPSPEYLLLVRNCRLECFGKS 700

Query: 694 SQDKLESNQ-SLFESASVKPVCIDSFPKLRALYCQYKSCVASALSGLSTGNSIHQTATLI 752
            +D++   + S     SV P+ +DSFP+L+  Y Q++ C+AS LS L TG+ +H     +
Sbjct: 701 PKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSL 760

Query: 753 LSMIYQK 759
           LSM+++K
Sbjct: 761 LSMMFKK 767