Miyakogusa Predicted Gene
- Lj1g3v2556380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2556380.1 Non Chatacterized Hit- tr|I1L6W7|I1L6W7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38178
PE,70.36,0,ZF_RING_2,Zinc finger, RING-type; SUBFAMILY NOT NAMED,NULL;
RING ZINC FINGER PROTEIN,NULL; seg,NULL;,CUFF.29146.1
(541 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 338 6e-93
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 132 9e-31
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 124 1e-28
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 111 2e-24
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 106 4e-23
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 103 2e-22
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 103 2e-22
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 103 3e-22
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 103 3e-22
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 103 3e-22
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 103 3e-22
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 102 6e-22
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 99 6e-21
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 99 6e-21
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 99 6e-21
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 99 7e-21
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 99 7e-21
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 99 7e-21
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 99 9e-21
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 98 1e-20
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 98 2e-20
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 96 4e-20
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 94 2e-19
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 88 2e-17
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 86 7e-17
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 3e-16
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 83 4e-16
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 80 4e-15
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 77 4e-14
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 1e-12
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 8e-12
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 2e-11
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 2e-11
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 2e-10
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 61 2e-09
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 61 2e-09
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 4e-09
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 1e-08
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 1e-08
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 2e-08
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 3e-08
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 4e-08
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 8e-08
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 9e-08
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 9e-08
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 55 9e-08
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 55 1e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 1e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 1e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 55 1e-07
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 55 2e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 2e-07
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 3e-07
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 3e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 3e-07
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-07
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 54 4e-07
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 53 4e-07
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 6e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 9e-07
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 2e-06
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 51 2e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 2e-06
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 2e-06
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 50 3e-06
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 50 3e-06
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 50 4e-06
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 4e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 4e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 4e-06
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 5e-06
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 5e-06
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-06
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 6e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 9e-06
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 9e-06
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 9e-06
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 229/556 (41%), Positives = 290/556 (52%), Gaps = 106/556 (19%)
Query: 13 ADSVHVAVCSLCQKVLSPDNEMTGDLANRGVCGDCKFLLLEDVGN--------LTVAQSS 64
++S+ + C+LC +V+ + DL +C DCKFLLLED G T+ +
Sbjct: 16 SNSIPSSACNLCGRVV---QSASDDLEIFSLCVDCKFLLLEDFGTPAPPLARRQTIRRRR 72
Query: 65 QRRVRGRFRHDSSESVE--NISSQQLPYMVNTMRQNQSTASSDDDQFVDGDAPAWSLQYG 122
RR R RHDSSESV ++SSQQ ++++ RQ+ ST + +D D
Sbjct: 73 MRRRRRTTRHDSSESVGVGDLSSQQFTHLISIARQSLSTVQASEDLRDD--------LRT 124
Query: 123 STHTTPSGSSRWRQFLSDSDSEGFDNWS--------SVYRAPHGETDSFSFSAYGGESDI 174
S+HTTPSGS+RWR F S+S+S+ FDN+ S+YR PH + D+ SFSAYGGESD
Sbjct: 125 SSHTTPSGSTRWRLF-SESESDDFDNFGETESNASFSLYRFPHADNDTISFSAYGGESDA 183
Query: 175 SVDRHSFVGTGILDLPDEGNQFDSDSDIDPMHAGLSQWISXXXXXXXXXXXXXXXXXXXX 234
S DRH+ I PD+ + D D+DIDPM AGL+QW S
Sbjct: 184 STDRHA----DIFVQPDDRSDIDFDTDIDPMRAGLNQWNSDEEDRE-------------- 225
Query: 235 XXXXXXXXWGLAEDDEAEVTARLQIFLTSDSSESRSNTNWEQRFNSTESVGIFTQVI--- 291
W R + +L S S S T RF+S E F Q I
Sbjct: 226 --------WEEGAGPSGVAGTRYRNYLASPSESYSSMT----RFDSPELERSFRQRIIER 273
Query: 292 -----RDTWQALEDAHL-PHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNN 345
R+ + LED P+ AN GDYLD R F++LLE LAE+D+SRRGAPPA+VS V N
Sbjct: 274 RHSLSRNIFTGLEDLDFSPYAANVGDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRN 333
Query: 346 LPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRY 405
LPR++I +EH G LVCAICK++ + E QLPC HLYH CI+PWLSARNSCPLCRY
Sbjct: 334 LPRVIIAEEHVMKG-LVCAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRY 392
Query: 406 ELPTDDKDYEEGKQNSDAGNVIHVTQLXXXXXXXXXXXXXXXXXXXXXYGNTLQQREXXX 465
ELPTDDKDYEEGK+N G + E
Sbjct: 393 ELPTDDKDYEEGKRN---------------------VLDVSEDSSSSDDGTESGEEEYVE 431
Query: 466 XXXXXXXAIRGGRGRWLFLAAAPIVSLVGMVLVMWLGSNSHIEVSRHLSGQNQHAVHVHA 525
R RGRWLFLAAAP+VSLVG+VL MWL S H +
Sbjct: 432 RGESESGVSRVSRGRWLFLAAAPVVSLVGVVLAMWLSS--------------PHRRGIAI 477
Query: 526 SPNQRESRSKRWWWPF 541
S +QRE+R++R W PF
Sbjct: 478 SHSQRENRTRR-WLPF 492
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 12/162 (7%)
Query: 257 LQIFLTSDSSESRSNTNWEQRFNSTESVGIFTQVIRDTWQALEDAHLPHGANFGDYLDTR 316
L+ +T + +E N WE N T + +++ L G + DY+ +
Sbjct: 215 LEGLVTRERAEGSGNLGWEVLLNHTLEINF----------DVDNRELYIGGDHDDYV--Q 262
Query: 317 RFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEV 376
++ L E A+ + S G PP + SF+NNLP +++ E++ G LVCA+CKD + G +
Sbjct: 263 DYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKA 322
Query: 377 NQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGK 418
QLPC+H YH CI+PWL RN+CP+CRYELPTDD +YE+ K
Sbjct: 323 VQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRK 364
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 71/109 (65%)
Query: 307 ANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAIC 366
NFGDY E L++ LAEND +R G PPA+ S ++ LP + + K+ K CA+C
Sbjct: 160 GNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVC 219
Query: 367 KDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYE 415
D G++V Q+PC H++H C+LPWL NSCP+CR+ELPTDD DYE
Sbjct: 220 MDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYE 268
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%)
Query: 321 LLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLP 380
+L + ++++ RG PPAA S + +LP + + E G VCA+CKD + +V +LP
Sbjct: 293 ILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLP 352
Query: 381 CSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGK 418
CSH YH CI+PWL RN+CP+CRYELPTDD +YE K
Sbjct: 353 CSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYERHK 390
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 66/102 (64%)
Query: 318 FEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVN 377
+ ++ + +N++ +G PPA+ S V+ LP + + E +VCAICKD + +V
Sbjct: 246 YNAIIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVK 305
Query: 378 QLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQ 419
+LPC H YH CI+PWL RN+CP+CR+ELPTDD +YE ++
Sbjct: 306 RLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDDLEYERKRR 347
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 309 FGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKD 368
GDY + LLEHLA+NDS R G+ PA V+NLP + I + L C+IC D
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISES------LQCSICLD 246
Query: 369 VLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
G+E ++PC H +H CI+PWL +SCP+CRYELP DD+
Sbjct: 247 DFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 290
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 309 FGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKD 368
GDY + LLEHLA+NDS R G+ PA V+NLP + I + L C+IC D
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISES------LQCSICLD 246
Query: 369 VLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
G+E ++PC H +H CI+PWL +SCP+CRYELP DD+
Sbjct: 247 DFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 290
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 307 ANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAIC 366
N GDY E+L E L+ ++RRG PPA S ++ LP I I + H + + C +C
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193
Query: 367 KDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPT 409
KD G+E Q+PC+H+YH CI+PWL NSCP+CR ELP+
Sbjct: 194 KDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 307 ANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAIC 366
N GDY E+L E L+ ++RRG PPA S ++ LP I I + H + + C +C
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193
Query: 367 KDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPT 409
KD G+E Q+PC+H+YH CI+PWL NSCP+CR ELP+
Sbjct: 194 KDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 307 ANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAIC 366
N GDY E+L E L+ ++RRG PPA S ++ LP I I + H + + C +C
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 193
Query: 367 KDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPT 409
KD G+E Q+PC+H+YH CI+PWL NSCP+CR ELP+
Sbjct: 194 KDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 304 PHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVC 363
P + GDY + LL+HLAEND +R+G PPA V LP + I + L C
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEP------LQC 259
Query: 364 AICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQNSD 422
++C D GTE ++PC H +H CI+PWL +SCP+CR+ELP+ D +E K +S+
Sbjct: 260 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSE 318
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 6/98 (6%)
Query: 318 FEDLLEHLAENDSS-----RRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAP 372
FE LLE L++ ++S R G PPA+ S + +LPR+ I H K E CA+C +V
Sbjct: 166 FERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK-AEANCAVCTEVFEA 224
Query: 373 GTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTD 410
G E ++PC H++H CI+PWLS RNSCP+CR+ELP+D
Sbjct: 225 GIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 303 LPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELV 362
+ G N GDY E+L+E L+ + + RG PPA S ++ LP I I ++H K +
Sbjct: 127 IARGTNAGDYFFGPGLEELIEQLS-SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSH 185
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C +CKD +E Q+PC H+YH CI+PWL NSCP+CR ELP
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 303 LPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELV 362
+ G N GDY E+L+E L+ + + RG PPA S ++ LP I I ++H K +
Sbjct: 127 IARGTNAGDYFFGPGLEELIEQLS-SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSH 185
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C +CKD +E Q+PC H+YH CI+PWL NSCP+CR ELP
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 303 LPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELV 362
+ G N GDY E+L+E L+ + + RG PPA S ++ LP I I ++H K +
Sbjct: 127 IARGTNAGDYFFGPGLEELIEQLS-SGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSH 185
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C +CKD +E Q+PC H+YH CI+PWL NSCP+CR ELP
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 284 VGIFTQVIRDTWQALEDAHLPHGANFGDYLDTRRFEDLLEHLAEND-SSRRGAPPAAVSF 342
+ F Q IR +++ +P G+ GDY FE LL+ LAEND ++R G PPA
Sbjct: 151 INSFNQRIRVHQDSVDTTSVPSGS-LGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEA 209
Query: 343 VNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPL 402
V L + I + L C++C D G E ++PC H +H C+LPWL +SCP+
Sbjct: 210 VEALAMVKI-----EDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPV 264
Query: 403 CRYELPTDDKD 413
CRY LPT D D
Sbjct: 265 CRYLLPTGDDD 275
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 284 VGIFTQVIRDTWQALEDAHLPHGANFGDYLDTRRFEDLLEHLAEND-SSRRGAPPAAVSF 342
+ F Q IR +++ +P G+ GDY FE LL+ LAEND ++R G PPA
Sbjct: 151 INSFNQRIRVHQDSVDTTSVPSGS-LGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEA 209
Query: 343 VNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPL 402
V L + I + L C++C D G E ++PC H +H C+LPWL +SCP+
Sbjct: 210 VEALAMVKI-----EDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPV 264
Query: 403 CRYELPTDDKD 413
CRY LPT D D
Sbjct: 265 CRYLLPTGDDD 275
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 284 VGIFTQVIRDTWQALEDAHLPHGANFGDYLDTRRFEDLLEHLAEND-SSRRGAPPAAVSF 342
+ F Q IR +++ +P G+ GDY FE LL+ LAEND ++R G PPA
Sbjct: 151 INSFNQRIRVHQDSVDTTSVPSGS-LGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEA 209
Query: 343 VNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPL 402
V L + I + L C++C D G E ++PC H +H C+LPWL +SCP+
Sbjct: 210 VEALAMVKI-----EDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPV 264
Query: 403 CRYELPTDDKD 413
CRY LPT D D
Sbjct: 265 CRYLLPTGDDD 275
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 303 LPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELV 362
+P G+ GDY FE LL+ LAEND +R G PPA V L + I + L
Sbjct: 170 VPAGS-LGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEET------LQ 222
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQNSD 422
C++C D GTE +PC+H +H C+LPWL +SCP+CRY+LP D+ + SD
Sbjct: 223 CSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSD 282
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 6/98 (6%)
Query: 318 FEDLLEHLAENDSS-----RRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAP 372
FE LLE L++ ++S R G PPA+ S + +LPR+ I H E CA+C ++
Sbjct: 150 FERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCH-IGSEANCAVCTEIFET 208
Query: 373 GTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTD 410
TE ++PC HL+H CI+PWLS RNSCP+CR+ELP++
Sbjct: 209 ETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 246
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 308 NFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGE---LVCA 364
++ DYL T +E L E AE SS G PPA+ SF+ NL + E + + CA
Sbjct: 317 DYEDYLHTTEYEMLFE--AEI-SSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCA 373
Query: 365 ICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTD 410
+CK+ + G EV +LPC H YH CI+PWL RN+CP+CR+ELP+D
Sbjct: 374 VCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 305 HGANFGDYLD-TRRFEDLLEHLAENDSSRRG----APPAAVSFVNNLPRIVIGKEHEKHG 359
+ N DY+D +E LL++LAE D G APPAA S + L + E
Sbjct: 195 YAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSS-EGEM 253
Query: 360 ELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQ 419
+VCA+CKD + G +LPC H YH CI+PWL RNSCP+CR++L TDD +YEE ++
Sbjct: 254 VMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERK 313
Query: 420 N 420
Sbjct: 314 K 314
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 328 NDSSRRGAPPAAVSFVNNLPRIVIGKEHEKH--GELVCAICKDVLAPGTEVNQLPCSHLY 385
+D APPA+ V LP I+ +E K E C ICK+ L G ++ +LPC H +
Sbjct: 193 DDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTF 252
Query: 386 HPSCILPWLSARNSCPLCRYELPTDDKDYE 415
HP C+ PWL NSCP+CR+ELPTDD+ YE
Sbjct: 253 HPPCLKPWLDEHNSCPICRHELPTDDQKYE 282
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 318 FEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVN 377
FE+L L RRG PPA+++ +N+L +I I ++H + C +C+D G++
Sbjct: 78 FEELFNRLPA-LQDRRGPPPASLAAINSLQKIKIRQKHLGL-DPYCPVCQDQFEIGSDAR 135
Query: 378 QLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKD 413
++PC H+YH CILPWL RN+CP+CR ELP D +
Sbjct: 136 KMPCKHIYHSECILPWLVQRNTCPVCRKELPQDRNN 171
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 304 PHGANFGDYLD-TRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELV 362
P N DY E L+E L ++D R G PPA+ +N+LP + I +H +
Sbjct: 166 PRHVNSHDYFTGASSLEQLIEQLTQDD--RPGPPPASEPTINSLPSVKITPQHLTNDMSQ 223
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C +C + G + +LPC H+YH CI+PWL NSCP+CR +LP
Sbjct: 224 CTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLP 269
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 328 NDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHP 387
+D ++G PA S V N+PR+VIG++ EK+G CAIC D + G ++PC H +H
Sbjct: 75 SDGGKQGRSPALKSEVENMPRVVIGEDKEKYGG-SCAICLDEWSKGDVAAEMPCKHKFHS 133
Query: 388 SCILPWLSARNSCPLCRYELP 408
C+ WL +CP+CRYE+P
Sbjct: 134 KCVEEWLGRHATCPMCRYEMP 154
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 336 PPAAVSFVNNLPRIVIGKEHE-KHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWL 394
PPA+ S + LP I I H + CA+CK+ + ++PC+H+YHP CILPWL
Sbjct: 173 PPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWL 232
Query: 395 SARNSCPLCRYELPTDD 411
+ RNSCP+CR+ELP +D
Sbjct: 233 AIRNSCPVCRHELPAED 249
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 359 GELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDD 411
GE+ C ICK+ ++ G +V ++PC H +H CILPWLS +N+CP CR++LPTDD
Sbjct: 210 GEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDD 262
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 361 LVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
L+CA+CK+ G +LPCSH+YH CI+PWLS NSCPLCR+ELPT K
Sbjct: 167 LLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAK 218
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 330 SSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSC 389
S + G PPA+ S + + R VI + + E VCAICK+ G E +L C HLYH SC
Sbjct: 106 SVQIGPPPASQSAIEAV-RTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSC 164
Query: 390 ILPWLSARNSCPLCRYEL 407
I+ WL+ N+CP+CR+E+
Sbjct: 165 IVSWLNIHNTCPICRFEV 182
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 321 LLEHLAENDSSRRGAPPAAVSFVNNLPRIVI-GKEHEKHGELVCAICKDVLAPGTEVNQL 379
LL L E S G PPA+ + ++ +P + I G E E C IC + V ++
Sbjct: 78 LLRSLLE--SREEGRPPASKASIDAMPIVEIDGCEGE------CVICLEEWKSEETVKEM 129
Query: 380 PCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQNSDAGNVIHV 429
PC H +H CI WL SCP+CRYE+P D + GK+ +D GN I V
Sbjct: 130 PCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEI--GKKRND-GNEIWV 176
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEG 417
CAIC++ G +LPC+HLYH CI+PWL++ NSCPLCR ELP + + G
Sbjct: 96 CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSEDDSG 150
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 346 LPRI-VIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
LP + +E + G +VCAIC++ LA +++LPC H YH CI WLS RN+CPLCR
Sbjct: 79 LPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCR 138
Query: 405 Y--ELP 408
+ ELP
Sbjct: 139 HNVELP 144
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%)
Query: 341 SFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSC 400
S N R + +E GE CAIC G EV L C H + CI+ W R +C
Sbjct: 150 SIANKSTRYMRKRETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNC 209
Query: 401 PLCRYELPTDD 411
PLCR+ELP +D
Sbjct: 210 PLCRFELPRED 220
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 337 PAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA 396
PA+ V +L R + GE+ C IC + + G V LPC H + C+L W
Sbjct: 34 PASKLVVKSLARKIYKMTTSSTGEM-CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFET 92
Query: 397 RNSCPLCRYELP 408
+SCPLCR++LP
Sbjct: 93 NHSCPLCRFKLP 104
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 337 PAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA 396
PA VN+L R + K C IC + GT+V LPC H + C+L W
Sbjct: 151 PANKLVVNSLARKIYKKTTSSTER--CTICLEEFNDGTKVMTLPCGHEFDDECVLTWFET 208
Query: 397 RNSCPLCRYELPTDDK 412
+ CPLCR++LP +D+
Sbjct: 209 NHDCPLCRFKLPCEDQ 224
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 356 EKHGELVCAICKDVLAPGTEVNQL-PCSHLYHPSCILPWLSARNSCPLCRYELP 408
EKH C IC + A G ++ ++ CSH +H CI PWL +++CPLCR E+P
Sbjct: 63 EKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP 116
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 317 RFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGE-LVCAICKDVLAPGTE 375
+FE +L+ + N+++ PA+ V +L R K + GE +C+IC + G
Sbjct: 198 QFEQVLQ-ASFNETNTARLKPASKLAVESLNRKTYKKASDVVGENEMCSICLEEFDDGRS 256
Query: 376 VNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
+ LPC H + C L W + CPLCR++LP +D+
Sbjct: 257 IVALPCGHEFDDECALKWFETNHDCPLCRFKLPCEDQ 293
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 337 PAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA 396
PA + V LPR+ + ++ E C IC + + +LPC H YH C+ WL
Sbjct: 461 PATIRAVAMLPRVAMVEKGE------CVICFEEWSKSDMETELPCKHKYHLECVEKWLKI 514
Query: 397 RNSCPLCRYELPTDDKDY 414
SCP CRY+L K +
Sbjct: 515 HTSCPQCRYKLSCVYKSF 532
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 356 EKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCPLCRYELP 408
EKH C IC + G ++ ++ CSH +H CI PWL ++ CPLCR E+P
Sbjct: 63 EKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIP 116
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 363 CAICKDVLAPGT---EVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
C+IC + L G ++ ++ CSH++H C+L WL +N+CPLCR EL
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 320 DLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQL 379
+LL L EN+ GA + + +NNLP + ++ + C IC + G + L
Sbjct: 552 ELLLALDENNHRHGGA---SANRINNLPESTVQTDNFQE---TCVICLETPKIGDTIRHL 605
Query: 380 PCSHLYHPSCILPWLSARNSCPLCR 404
PC H +H CI PWL SCP+C+
Sbjct: 606 PCLHKFHKDCIDPWLGRSKSCPVCK 630
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 3/112 (2%)
Query: 296 QALEDAHLPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEH 355
+ E L N + D +E+LL E R G + NL R K
Sbjct: 163 EQFETESLEEYTNPSSHGDIFTYEELLSITDETGDERTGLSEEVID--ENLIRRKYEKRS 220
Query: 356 EKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
+ + C IC+ L EV++L C H +H CI WL N CPLC E+
Sbjct: 221 DDETKR-CVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREV 271
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 357 KHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
K ++ C+IC++ G E+ +PC H+YH SC+ WL +N CP+C+
Sbjct: 469 KDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 357 KHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
K ++ C+IC++ G E+ +PC H+YH SC+ WL +N CP+C+
Sbjct: 469 KDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 352 GKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRY 405
G+E +K C++C + P V PC H++H CI+PWL + CP+CR+
Sbjct: 165 GEEDDKR----CSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKD 413
C IC G E++ LPC+H +H +CI+ WL R +CPLC+Y + D
Sbjct: 307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTTD 357
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 357 KHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
K ++ C+IC++ G EV LPC H YH SC WL +N CP+C+
Sbjct: 462 KDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 357 KHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
K ++ C+IC++ G EV LPC H YH SC WL +N CP+C+
Sbjct: 462 KDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYE-LPTDDKDYEE 416
C IC GTE+ +LPC H +H SC+ WL +CPLC+Y L + + D EE
Sbjct: 353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDREE 407
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 352 GKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRY 405
G+E +K C++C + P V PC H++H CI+PWL + CP+CR+
Sbjct: 137 GEEDDKR----CSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 186
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 360 ELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRY 405
EL C++C + + G V LPC H +H CI PWL + +CP+C++
Sbjct: 208 ELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 362 VCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEGKQNS 421
VC IC A E+ +LPCSH +H C+ WL SCPLC+ E+ G++NS
Sbjct: 362 VCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV---------GEKNS 412
Query: 422 D 422
D
Sbjct: 413 D 413
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYE-LPTDDKDYEE 416
C IC GTE+ +LPC H +H SC+ WL +CPLC+Y L + + D EE
Sbjct: 282 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDREE 336
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 363 CAICKDVLAPGTE---VNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
C+IC + L G + V ++ CSH++H C+L WL +N+CPLCR E+
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 358 HGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDKDYEEG 417
H + C IC TE+ +LPC H +H C+ WL +CPLC+Y + +YEEG
Sbjct: 320 HEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI-LKSSNYEEG 378
Query: 418 KQ 419
++
Sbjct: 379 EE 380
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 343 VNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCP 401
+ +LP V+G +++ G CA+C +L LP C H++H SC+ WL+ +++CP
Sbjct: 81 IASLPTFVVGIKNDVAGT-ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCP 139
Query: 402 LCRYE 406
+CR E
Sbjct: 140 VCRTE 144
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
CAIC D G + LPC+H +H C+LPWL CP CR ++
Sbjct: 150 CAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 337 PAAVSFVNNLPRIVIGKEHEKHGEL-VCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLS 395
PA V+ L R V K+ + + + VC IC + G V LPC H + CI W
Sbjct: 131 PANKLVVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFL 190
Query: 396 ARNSCPLCRYELPT 409
+ CPLCR+ELP
Sbjct: 191 KDHVCPLCRFELPC 204
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 341 SFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNS 399
S + +LP G L CA+C P + LP C H +H C+ WL A ++
Sbjct: 70 SVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHST 129
Query: 400 CPLCRYELPTDD 411
CPLCRY + +D
Sbjct: 130 CPLCRYRVDPED 141
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 340 VSFVNNLPRIV---IGKEHEKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLS 395
VS V P + + + GEL CAIC + + LP C H++HP CI WL
Sbjct: 102 VSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLE 161
Query: 396 ARNSCPLCRYEL 407
A +CP+CR L
Sbjct: 162 AHVTCPVCRANL 173
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 363 CAICKDVLAPG---TEVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
C+IC + L G +++ ++ CSH++H C+L W +N+CPLCR EL
Sbjct: 153 CSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 327 ENDSSRRGAPPAAVSFVNNLPRIVIGK-EHEKHGELV-----CAICKDVLAPGTEVNQLP 380
E + +RG + + + LP++++G+ HE+ E CAIC E P
Sbjct: 90 EREGKKRGLKQSVIETL--LPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFP 147
Query: 381 -CSHLYHPSCILPWLSARNSCPLCRYELP 408
C H+YH CI WL +CP CR +LP
Sbjct: 148 VCRHIYHALCIDAWLKNHLTCPTCRKDLP 176
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 297 ALEDAHLPHGANFGDYLDTRRFEDLLEHLAENDSSRRGAPPAAVSFVNNLPRIVIGKEHE 356
L ++ H A TR F + A + SSRRG AV V + P E
Sbjct: 61 GLLSVYIRHCARSNPDSSTRYFRNR----ANDGSSRRGGLDNAV--VESFPVFAYSSVKE 114
Query: 357 KH---GELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCPLCRYEL 407
+L CAIC + L V LP C+HL+H CI WL + +CP+CR L
Sbjct: 115 SKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 342 FVNNLPRIVIG-KEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA-RNS 399
V+ LP H K GE CAIC + G + LPC H +H +CI WL+ S
Sbjct: 211 LVHTLPCFTFTDSAHHKAGE-TCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTS 269
Query: 400 CPLCRYELPTDDKDYEEGKQNS 421
CP+C++++ T+ E K+ S
Sbjct: 270 CPVCKHDIRTETMSSEVHKRES 291
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
C IC L+ G +LPCSH++H CI+ WL SCP+CR
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 343 VNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPL 402
+N L R K C+IC + G + LPC+H +H SC+ PWL A CP
Sbjct: 183 INCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPC 242
Query: 403 CRYEL 407
CR +
Sbjct: 243 CRRAI 247
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 362 VCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTD 410
VC IC + G + LPC H + C+L W + CPLCR ELP +
Sbjct: 276 VCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCRLELPCE 324
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 363 CAIC-KDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
CAIC +D + + V +LPC H +H CI WL + CPLCR +P D K
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKDVK 233
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 349 IVIGKEHEKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCPLCRYEL 407
+ IGK G + CAIC + + +P CSH +H SCI WLS+R++CP+CR L
Sbjct: 119 LKIGK-----GGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
Query: 408 P 408
P
Sbjct: 174 P 174
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
C IC G E+ LPC+H +H +CI+ WL +CPLC++ +
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 356 EKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARN-SCPLCRYELPTDDKDY 414
+K + C++C +E+N+L C HL+H +C+ W+ N +CPLCR L +D+
Sbjct: 96 KKQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDH 155
Query: 415 E 415
+
Sbjct: 156 Q 156
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 356 EKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARN-SCPLCRYELPTDDKDY 414
+K + C++C +E+N+L C HL+H +C+ W+ N +CPLCR L +D+
Sbjct: 96 KKQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDH 155
Query: 415 E 415
+
Sbjct: 156 Q 156
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 341 SFVNNLP----RIVIGKEHEKHGELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLS 395
SF++ LP + +IG H+ CA+C E+ LP CSH +H CI WL
Sbjct: 99 SFIDALPLLHYKTMIGLRHDLSD---CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 396 ARNSCPLCR 404
++CPLCR
Sbjct: 156 TNSTCPLCR 164
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C IC EV +LPCSH +H C+ WL + CPLC+ +LP
Sbjct: 289 CCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDLP 334
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C IC EV +LPCSH +H C+ WL + CPLC+ +LP
Sbjct: 289 CCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDLP 334
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C IC EV +LPCSH +H C+ WL + CPLC+ +LP
Sbjct: 297 CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELP 408
C IC EV +LPCSH +H C+ WL + CPLC+ +LP
Sbjct: 297 CCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYELPTDDK 412
C+IC++ G EV +L C H YH C+ WL ++ CP+C+ T K
Sbjct: 448 CSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAETSSK 497
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 337 PAAVSFVNNLPRIVIGKEHEKHGELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA 396
PA+ V +L R + K + GE C IC + G + LPC H + C + W
Sbjct: 251 PASKLVVKSLTRKIYDKINYT-GER-CTICLEEFNAGGILVALPCGHDFDDECAVKWFET 308
Query: 397 RNSCPLCRYELPTDD 411
+ CPLCRYELP ++
Sbjct: 309 NHFCPLCRYELPREE 323
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 363 CAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCPLCRYEL 407
CAIC A G V LP C+H +H SCI WL + +SCP CR+ L
Sbjct: 105 CAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCRYEL 407
C+IC A G ++ LPC H+YH CI WL C +C+ E+
Sbjct: 234 CSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARN-SCPLCRYELPTDD 411
C +C L G EV +L C H++H C+ WL N +CPLCR L +DD
Sbjct: 86 CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 342 FVNNLPRIVIGKEHEKHG-ELVCAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSA-RNS 399
V +P ++ HE + CAIC + G ++ LPC H +H +C+ WL++ R
Sbjct: 210 LVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTF 269
Query: 400 CPLCR 404
CP+C+
Sbjct: 270 CPVCK 274
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 353 KEHEKHG--ELVCAICKDVLAPGTEVNQLP-CSHLYHPSCILPWLSARNSCPLCR 404
K+ EK G E+ C+IC + L G E+ ++ C H++H SCI WL SCP CR
Sbjct: 105 KDIEKEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCR 159
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 363 CAICKDVLAPGTEVNQLPCSHLYHPSCILPWLSARNSCPLCR 404
C+IC+D EV +L C H +H C+ WLS +N+CP+C+
Sbjct: 320 CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361