Miyakogusa Predicted Gene
- Lj1g3v2536150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2536150.1 Non Chatacterized Hit- tr|I1L6X3|I1L6X3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.54,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PENTATR,CUFF.29122.1
(707 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 931 0.0
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 888 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 702 0.0
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 519 e-147
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 474 e-133
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 467 e-131
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 450 e-126
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 443 e-124
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 438 e-123
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 438 e-123
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-123
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 434 e-121
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 429 e-120
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 424 e-118
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 422 e-118
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 417 e-116
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 415 e-116
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 406 e-113
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 403 e-112
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 401 e-111
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 399 e-111
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-109
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 393 e-109
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 392 e-109
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 392 e-109
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 387 e-107
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 384 e-106
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 381 e-106
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 371 e-102
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 369 e-102
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 364 e-100
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 358 1e-98
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 7e-97
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 350 1e-96
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 6e-96
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 7e-96
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 344 2e-94
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 8e-94
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 1e-93
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 3e-93
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 337 1e-92
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 8e-92
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 333 2e-91
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 8e-91
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 325 8e-89
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 3e-86
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 8e-86
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 308 7e-84
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 2e-80
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 9e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 9e-80
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 294 2e-79
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 293 2e-79
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 6e-79
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 286 4e-77
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 6e-76
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 282 7e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 274 1e-73
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 6e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 6e-72
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 2e-71
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 266 3e-71
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 5e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 263 2e-70
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 9e-70
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 3e-69
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 6e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 257 2e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 7e-67
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 246 4e-65
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 6e-64
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 7e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 7e-57
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 6e-54
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 3e-53
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 4e-52
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 9e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 9e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 3e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 185 8e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 7e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 1e-39
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 125 8e-29
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 8e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 8e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 110 2e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 106 7e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 98 2e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 6e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 96 7e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 6e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 89 9e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 82 2e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 7e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 2e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 9e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 2e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 8e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 7e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 6e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 7e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 53 8e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 50 7e-06
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/704 (61%), Positives = 549/704 (77%), Gaps = 7/704 (0%)
Query: 9 RVCMVQVRFQCTSTGA-----ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQ 63
R+ ++ R TSTG ISR +RIG+I ARK FD + SWN++V+ YF
Sbjct: 3 RLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQF--KAIGSWNSIVSGYFS 60
Query: 64 AHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGY 123
P +A LF+ E+N+VSWNG+VSG++KN M+ EAR VF+ MP RNVVSWT+MV+GY
Sbjct: 61 NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 124 VQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIG 183
+QEG V EAE LFWRMPE+N VSWTVM GGL+ D R++ ARKL+DMMPVKDVVA TNMIG
Sbjct: 121 MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG 180
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
G C EGR++EAR +FDEM +RNVVTWTTM++GY +N RVDVARKLFEVMPE+ EVSWT+M
Sbjct: 181 GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWS 303
L+GYT SGR+ +A EFF+ MP+KPV+ACN MI+GFG G++ +A+ VF+ M +RD+ TW
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWR 300
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
MIK YERKGFELEAL LFA+MQ++G +FP +GRQVHA LVR
Sbjct: 301 GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
+FD D+YVAS L+TMYVKCG+LV+AK +F+R+ KD++MWNS+I+GY+ HGLGEEAL +F
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+M SG P+ ++ I +L+ACSY+GK++EG EIFESM+ K+ V P +EHY+C VD+LGR
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 484 AGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 543
AGQV+ A+E++E M ++PDA VWG+LLGAC+TH +LDLAEVA +KL + EP NAG YVLL
Sbjct: 481 AGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Query: 544 SHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKM 603
S + AS+ +W DV VVR+ ++T +V K PG SWIEV KK HMF G HPEQ +I+ M
Sbjct: 541 SSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMM 600
Query: 604 LERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKN 663
LE+ DGLLR+AGYSPD S VLHDV+EEEK SL HSE+LA+AYGLLK+PEG+PIRVMKN
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKN 660
Query: 664 LRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
LRVCGDCH+AIKLI+KVT REII+RDANRFHHF +G CSC+DYW
Sbjct: 661 LRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/689 (59%), Positives = 536/689 (77%), Gaps = 3/689 (0%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T+ I+ +RIG+I ARK+FD ++ SSWN+MVA YF P A LF+ P+
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDS--KSISSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+NI+SWNG+VSG++KNG + EAR+VFD MP RNVVSWT++V+GYV G V+ AE LFW+M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
PEKN VSWTVML G L+D R++DA KL++M+P KD +A T+MI G C+EGR++EAR +FD
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEF 259
EM +R+V+TWTTMV+GY +N RVD ARK+F+VMPE+ EVSWT+MLMGY +GR+ +A E
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 260 FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
F+ MPVKPV+ACN MI G G G++ +A+ VF+ M+ER+D +W +IK++ER GFELEAL
Sbjct: 257 FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEAL 316
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
LF MQ++G FP HG+QVHA+LVR +FD D+YVAS L+TMY
Sbjct: 317 DLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMY 376
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISF 438
+KCG+LV++K IF+R+P KD++MWNS+I+GY+ HGLGEEAL VF +M LSG P++++F
Sbjct: 377 IKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 439 IGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP 498
+ LSACSY+G V+EG +I+ESM+ + V+P HYACMVD+LGRAG+ N+A+E+++ M
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 499 MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEV 558
+EPDA VWGSLLGACRTH +LD+AE +KL ++EP+N+G Y+LLS+MYAS+GRW DV
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 559 VREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSP 618
+R+ +KTR V K PG SW EVE K H F G N HPEQ I+K+L+ LDGLLR+AGY+P
Sbjct: 557 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP 616
Query: 619 DHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIA 678
D S+ LHDV+EEEK +SL YHSE+LA+AY LLK+ EG+PIRVMKNLRVC DCH+AIK+I+
Sbjct: 617 DCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIIS 676
Query: 679 KVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KV REII+RDANRFHHF++G CSCKDYW
Sbjct: 677 KVKEREIILRDANRFHHFRNGECSCKDYW 705
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/702 (49%), Positives = 455/702 (64%), Gaps = 4/702 (0%)
Query: 7 TLRVCMVQVRFQCTS-TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAH 65
LRV R+ S G IS Y R G+ E ARK+FDE P R SWN M+ Y +
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE--RDLVSWNVMIKGYVRNR 140
Query: 66 QPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQ 125
+A LFE PE+++ SWN M+SG+ +NG V +AR VFD MP +N VSW +++ YVQ
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 126 EGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGY 185
+EEA LF +VSW +LGG +K ++ +AR+ FD M V+DVV+ +I GY
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 186 CEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLM 245
+ G+++EAR LFDE P ++V TWT MVSGY +NR V+ AR+LF+ MPERNEVSW AML
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLA 320
Query: 246 GYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAM 305
GY RM A E FD MP + V N MI G+ G + AK +F+KM +RD +W+AM
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 306 IKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF 365
I Y + G EAL LF +M+REG LN + G+Q+H RLV+ +
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 366 DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
+ +V +AL+ MY KCG + A +F KD+V WN+MI GYS+HG GE AL F
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M G+ PDD + + VLSACS++G V +GR+ F +M Y V P +HYACMVDLLGRAG
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 486 QVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSH 545
+ DA +++ MP EPDA +WG+LLGA R H +LAE A +K+ +EP+N+G YVLLS+
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620
Query: 546 MYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLE 605
+YAS GRW DV +R +++ + V K+PGYSWIE++ K H F GD HPE+ I LE
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD-EFHPEKDEIFAFLE 679
Query: 606 RLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLR 665
LD ++ AGY S VLHDVEEEEK + YHSE+LA+AYG+++V G PIRV+KNLR
Sbjct: 680 ELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLR 739
Query: 666 VCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
VC DCH+AIK +A++TGR II+RD NRFHHFKDG CSC DYW
Sbjct: 740 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 261/507 (51%), Gaps = 35/507 (6%)
Query: 55 NAMVAAYFQA--HQPHQAVTLFETTP-----EKNIVSWNGMVSGFVKNGMVAEARRVFDA 107
NA AA F + + +T P + +I WN +S +++ G EA RVF
Sbjct: 30 NAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKR 89
Query: 108 MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF 167
MP + VS+ M+ GY++ G E A +LF MPE+++VSW VM+ G +++ + AR+LF
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
++MP +DV + M+ GY + G +++AR++FD MP++N V+W ++S Y +N +++ A
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRA 287
LF+ VSW +L G+ ++ EA +FFD+M V+ VV+ N +I G+ G +D A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM-QREGAALNFPXXXXXXXXXXX 346
+ +F++ +D TW+AM+ Y + EA LF +M +R + N
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN------------- 316
Query: 347 XXXXDHGRQVHARLVRSEFD----QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
+ + + + FD +++ + +IT Y +CG + AK +F++ P +D V
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
W +MI GYSQ G EAL +F M G + SF LS C+ ++ G+++ +
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL- 435
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
K E G ++ + + G + +A ++ ++M + D + W +++ H
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH---GFG 491
Query: 523 EVAVE-----KLAQLEPKNAGPYVLLS 544
EVA+ K L+P +A +LS
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLS 518
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/586 (45%), Positives = 372/586 (63%), Gaps = 3/586 (0%)
Query: 124 VQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD-SRVEDARKLFDMMPVKDVVAVTNMI 182
V+ G+++ A R+F M KN ++W +L G+ KD SR+ +A +LFD +P D + M+
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 183 GGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTA 242
Y E+A++ FD MP ++ +W TM++GYAR ++ AR+LF M E+NEVSW A
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGT 301
M+ GY G + +AS FF PV+ VVA MI G+ V+ A+A+F+ M ++ T
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
W+AMI Y + L LF M EG N GRQ+H +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALN 421
+S D+ ++LI+MY KCG+L A +F KDVV WN+MI+GY+QHG ++AL
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 422 VFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLL 481
+FR+M + + PD I+F+ VL AC+++G V G FESM Y+VEP +HY CMVDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 541
GRAG++ +A++++ MP P A V+G+LLGACR H ++LAE A EKL QL +NA YV
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 542 LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIM 601
L+++YASK RWEDV VR+++K +V+K+PGYSWIE+ K H F D HPE I
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD-RIHPELDSIH 550
Query: 602 KMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVM 661
K L+ L+ ++ AGY P+ F LH+VEEE+K L +HSEKLA+A+G +K+P+G I+V
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 662 KNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KNLR+CGDCH AIK I+++ REIIVRD RFHHFKDG CSC DYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 164/317 (51%), Gaps = 24/317 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMV-------AAYFQAHQPHQAVTLFETT 77
I+R R G I+ A +VF + T +WN+++ + +AHQ LF+
Sbjct: 68 IARCVRSGDIDGALRVFHGMRA--KNTITWNSLLIGISKDPSRMMEAHQ------LFDEI 119
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
PE + S+N M+S +V+N +A+ FD MP ++ SW +M+ GY + G +E+A LF+
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 138 RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARAL 197
M EKN VSW M+ G ++ +E A F + PV+ VVA T MI GY + ++E A A+
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAM 239
Query: 198 FDEMP-KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGR 252
F +M +N+VTW M+SGY N R + KLF M E N ++ L+G +
Sbjct: 240 FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSA 299
Query: 253 MREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKV 308
++ + + V A +I + G++ A +FE M+++D W+AMI
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 309 YERKGFELEALGLFARM 325
Y + G +AL LF M
Sbjct: 360 YAQHGNADKALCLFREM 376
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 54/266 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK- 80
T I+ Y + ++E A +F + +++ +WNAM++ Y + +P + LF E+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMT-VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 81 --------------------------------------NIVSWNGMVSGFVKNGMVAEAR 102
++ + ++S + K G + +A
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-VSWTVMLGGLLKDSRV- 160
++F+ M ++VV+W +M+ GY Q GN ++A LF M + + W + LL +
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 161 ---------EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-NVVTWT 210
E + + + P D T M+ G+LEEA L MP R + +
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFG 457
Query: 211 TMVSGYARNRRVDVARKLFEVMPERN 236
T++ ++ V++A E + + N
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLN 483
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/731 (35%), Positives = 405/731 (55%), Gaps = 54/731 (7%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y++ G +ARK+FDE P RT SWN +++AY + F+ P+++ VSW
Sbjct: 59 YSKTGYALHARKLFDEMPL--RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTT 116
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERLFWRMPE-- 141
M+ G+ G +A RV M + + T+++ +E +++ + +
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 142 --KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
NV +L K A+ +FD M V+D+ + MI + + G+++ A A F+
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 200 EMPKRNVVTWTTMVSGYARN----RRVDVARKLFE---VMPER----------------- 235
+M +R++VTW +M+SG+ + R +D+ K+ + P+R
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 236 ----------------NEVSWTAMLMGYTHSGRMREASEFFDAMPVK--PVVACNEMIMG 277
+ + A++ Y+ G + A + K + ++ G
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 278 FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXX 337
+ GD+++AK +F +++RD W+AMI YE+ G EA+ LF M G N
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 338 XXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL 397
HG+Q+H V+S + V++ALITMY K G++ A F+
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 398 -KDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGRE 456
+D V W SMI +QHG EEAL +F M + G+ PD I+++GV SAC+++G V +GR+
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 457 IFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
F+ MK ++ P + HYACMVDL GRAG + +A E +EKMP+EPD + WGSLL ACR H
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 517 MKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSW 576
+DL +VA E+L LEP+N+G Y L+++Y++ G+WE+ +R+ +K V K G+SW
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 577 IEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSL 636
IEV+ K H+F G ++ HPE+ I ++++ ++ GY PD + VLHD+EEE K L
Sbjct: 657 IEVKHKVHVF-GVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQIL 715
Query: 637 GYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHF 696
+HSEKLAIA+GL+ P+ +R+MKNLRVC DCH+AIK I+K+ GREIIVRD RFHHF
Sbjct: 716 RHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHF 775
Query: 697 KDGYCSCKDYW 707
KDG+CSC+DYW
Sbjct: 776 KDGFCSCRDYW 786
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 206/458 (44%), Gaps = 47/458 (10%)
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
RV + + +V +++ Y + G A +LF MP + SW +L K ++
Sbjct: 39 RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDS 98
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYAR 218
+ FD +P +D V+ T MI GY G+ +A + +M K + T T +++ A
Sbjct: 99 TCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
Query: 219 NRRVDVARKLFEVMPE---RNEVSWTAMLMG-YTHSGRMREASEFFDAMPVKPVVACNEM 274
R ++ +K+ + + R VS + L+ Y G A FD M V+ + + N M
Sbjct: 159 TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
I G +D A A FE+M ERD TW++MI + ++G++L AL +F++M R+ +L
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD--SLLS 276
Query: 335 PXXXXXXXXXXXXXXXDH---GRQVHARLVRSEFDQDLYVASALITMYVKC--------- 382
P + G+Q+H+ +V + FD V +ALI+MY +C
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 383 ------------------------GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
GD+ +AK IF +DVV W +MI GY QHG E
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
A+N+FR M G P+ + +LS S + G++I S ++ + ++
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALI 455
Query: 479 DLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+ +AG + A + + E D + W S++ A H
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S I+ YA+ G I +A + FD R T SW +M+ A Q +A+ LFET +
Sbjct: 451 SNALITMYAKAGNITSASRAFD-LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 81 NI----VSWNGMVSGFVKNGMVAEARRVFDAMP-----VRNVVSWTSMVRGYVQEGNVEE 131
+ +++ G+ S G+V + R+ FD M + + + MV + + G ++E
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 132 AERLFWRMP-EKNVVSWTVMLGGLLKDSRVED--------ARKLFDMMPVKDVVAVTNMI 182
A+ +MP E +VV+W G LL RV A +L + P ++ A + +
Sbjct: 570 AQEFIEKMPIEPDVVTW----GSLLSACRVHKNIDLGKVAAERLLLLEP-ENSGAYSALA 624
Query: 183 GGYCEEGRLEEARALFDEM 201
Y G+ EEA + M
Sbjct: 625 NLYSACGKWEEAAKIRKSM 643
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/666 (36%), Positives = 380/666 (57%), Gaps = 24/666 (3%)
Query: 57 MVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSW 116
++ + + + +A +F P ++ + M++G+ ++ + +A +FD MPVR+VVSW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 117 TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV 176
SM+ G V+ G++ A +LF MPE++VVSWT M+ G + +V+ A +LF MPVKD
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM---- 232
A +M+ GY + G++++A LF +MP +NV++WTTM+ G +N R A LF+ M
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV----------ACNEMIMGFGFDG 282
+ +T ++ + A F + V ++ +I +
Sbjct: 221 IKSTSRPFTCVITACAN------APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
+ ++ VF++ W+A++ Y +AL +F+ M R N
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
D G+++H V+ + D +V ++L+ MY G++ A +F + K +V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
WNS+I G +QHG G+ A +F M PD+I+F G+LSACS+ G +++GR++F M
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMS 454
Query: 463 CKY-QVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL 521
++ I+HY CMVD+LGR G++ +A E++E+M ++P+ +VW +LL ACR H +D
Sbjct: 455 SGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDR 514
Query: 522 AEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEK 581
E A + L+ K++ YVLLS++YAS GRW +V +R K+K ++K PG SW+ +
Sbjct: 515 GEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Query: 582 KAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSE 641
K H F GD P I + LE L L++ GY+PD+ LHDVE+E+K L YHSE
Sbjct: 575 KKHEFFSGD---QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 631
Query: 642 KLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYC 701
+LAIA+GL+ EG + VMKNLRVC DCH+ IKLI+ V GREI++RD RFHHFK+G C
Sbjct: 632 RLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTC 691
Query: 702 SCKDYW 707
SC DYW
Sbjct: 692 SCGDYW 697
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 204/398 (51%), Gaps = 4/398 (1%)
Query: 149 VMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
V++ L R+++AR++F+ +P V T MI GY RL +A LFDEMP R+VV+
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 209 WTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
W +M+SG ++ A KLF+ MPER+ VSWTAM+ G SG++ +A F MPVK
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
A N M+ G+ G VD A +F++M ++ +W+ MI ++ EAL LF M R
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G QVH +++ F + YV+++LIT Y C + +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+ +F+ + V +W ++++GYS + E+AL++F M + + P+ +F L++CS
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G + G+E+ + K +E +V + +G VNDAV + K+ + + W S
Sbjct: 340 GTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNS 397
Query: 509 LLGACRTHMKLDLAEVAVEKLAQL--EPKNAGPYVLLS 544
++ C H + A V ++ +L EP LLS
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 205/443 (46%), Gaps = 54/443 (12%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T I+ Y R ++ +A +FDE P R SWN+M++ + + AV LF+ PE++
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMP--VRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+VSW MV+G ++G V +A R+F MPV++ +W SMV GY+Q G V++A +LF +MP
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMM----------PVKDVVAV------------- 178
KNV+SWT M+ GL ++ R +A LF M P V+
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 179 ----------------TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
++I Y R+ ++R +FDE V WT ++SGY+ N++
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 223 DVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNE 273
+ A +F M N+ ++ + L + G + E + VK N
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNS 366
Query: 274 MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
+++ + G+V+ A +VF K+ ++ +W+++I + G A +F +M R +
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVR--SEFDQDLYVASALITMYVKCGDLVRAKWI 391
+ GR++ + + D+ + + ++ + +CG L A+ +
Sbjct: 427 EITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486
Query: 392 FNRYPLK-DVVMWNSMITGYSQH 413
R +K + ++W ++++ H
Sbjct: 487 IERMVVKPNEMVWLALLSACRMH 509
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 21/243 (8%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S I+ YA +I ++RKVFDE +H + W A+++ Y + A+++F
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEK--VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 81 NIV-SWNGMVSGFVKNGMVAEAR--RVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEA 132
+I+ + + SG + + + V+ + S+V Y GNV +A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM----PVKDVVAVTNMIGGYCEE 188
+F ++ +K++VSW ++ G + R + A +F M D + T ++
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 189 GRLEEARALFDEMPK------RNVVTWTTMVSGYARNRRVDVARKLFEVMPER-NEVSWT 241
G LE+ R LF M R + +T MV R ++ A +L E M + NE+ W
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Query: 242 AML 244
A+L
Sbjct: 501 ALL 503
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 272/753 (36%), Positives = 411/753 (54%), Gaps = 71/753 (9%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
+G +S +A+ G + ARKVF++ R + N ++ + +A LF
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMET--RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 75 ETTPEKNIVSW-------------------------------------NGMVSGFVKNGM 97
+ +PE ++ NG+V+ + K G
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD 157
+A+ARRVF M ++ VSW SM+ G Q G EA + M +++ + L L
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 158 SRVEDARKLFDMMPVKDV-------VAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTW 209
KL + + + V+V+N ++ Y E G L E R +F MP+ + V+W
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 210 TTMVSGYARNRRVDVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFDAMP 264
+++ AR+ R + + +R N ++++++L + E + +
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL-SFGELGKQIHGLA 543
Query: 265 VKPVVAC-----NEMIMGFGFDGDVDRAKAVFEKMRER-DDGTWSAMIKVYERKGFELEA 318
+K +A N +I +G G++D + +F +M ER D+ TW++MI Y +A
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKA 603
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
L L M + G L+ + G +VHA VR+ + D+ V SAL+ M
Sbjct: 604 LDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDM 663
Query: 379 YVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDIS 437
Y KCG L A FN P+++ WNSMI+GY++HG GEEAL +F M L G PPD ++
Sbjct: 664 YSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVT 723
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
F+GVLSACS++G ++EG + FESM Y + P IEH++CM D+LGRAG+++ + +EKM
Sbjct: 724 FVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM 783
Query: 498 PMEPDAIVWGSLLGAC--RTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWED 555
PM+P+ ++W ++LGAC K +L + A E L QLEP+NA YVLL +MYA+ GRWED
Sbjct: 784 PMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWED 843
Query: 556 VEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAG 615
+ R+K+K V K GYSW+ ++ HMFV GD + HP+ +I K L+ L+ +RDAG
Sbjct: 844 LVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS-HPDADVIYKKLKELNRKMRDAG 902
Query: 616 YSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGL-LKVPEGMPIRVMKNLRVCGDCHSAI 674
Y P F L+D+E+E K L YHSEKLA+A+ L + +PIR+MKNLRVCGDCHSA
Sbjct: 903 YVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAF 962
Query: 675 KLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
K I+K+ GR+II+RD+NRFHHF+DG CSC D+W
Sbjct: 963 KYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 210/475 (44%), Gaps = 46/475 (9%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
L++ +K++ N +++ +++ G AR+VFD MP+RN VSW +V GY + G +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSR------VEDARK----LFDMMPVKDVVAVTNMI 182
M ++ + S +L+ + + R+ +F + D V +I
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 183 GGYCE-EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNE 237
Y + G + A F ++ +N V+W +++S Y++ A ++F M E
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 238 VSWTAMLMGYTHSGRMREAS---------EFFDAMPVKPVVACNEMIMGFGFDGDVDRAK 288
++ +++ T + + E + + + + ++ F G + A+
Sbjct: 207 YTFGSLV---TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR------EGAAL---NFPXXXX 339
VF +M R+ T + ++ R+ + EA LF M E + +FP
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP---- 319
Query: 340 XXXXXXXXXXXDHGRQVHARLVRSEF-DQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
GR+VH ++ + D + + + L+ MY KCG + A+ +F K
Sbjct: 320 -EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D V WNSMITG Q+G EA+ ++ M + P + I LS+C+ K G++I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 459 -ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
ES+K + + + ++ L G +N+ +I MP E D + W S++GA
Sbjct: 439 GESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 50/297 (16%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
R H+RL ++ D+D+Y+ + LI Y++ GD V A+ +F+ PL++ V W +++GYS+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK--EGREIFESM-KCKYQVEP 469
+G +EAL RDM G+ + +F+ VL AC G V GR+I M K Y V+
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 470 GIE------HYAC------------------------MVDLLGRAGQVNDAVEIVEKMPM 499
+ ++ C ++ + +AG A I M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 500 E---PDAIVWGSLL-GACR-THMKLDLAE---VAVEKLAQLEPKNAGPYVLLSHMYASKG 551
+ P +GSL+ AC T + L E ++K L G L +A G
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG--LVSAFAKSG 257
Query: 552 RWEDVEVVREKIKTRSVIKLPGY-------SWIEVEKKAHMFVGGDNNCHPEQPIIM 601
V +++TR+ + L G W E K M + + PE +I+
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/746 (34%), Positives = 402/746 (53%), Gaps = 56/746 (7%)
Query: 14 QVRFQCTSTGAISRYARIGQIENARKVFDETPHI-HRTTSSWNAMVAAYFQAHQPHQAVT 72
Q++ C S ++ Y +G + AR FD HI +R +WN M++ Y +A + +
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFD---HIQNRDVYAWNLMISGYGRAGNSSEVIR 138
Query: 73 LFET-------TPE-----------KNIVSWNGMVSGFVKNGM----------------- 97
F TP+ + ++ N + +K G
Sbjct: 139 CFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 98 --VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
V AR +FD MPVR++ SW +M+ GY Q GN +EA L + + V+ +L
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACT 258
Query: 156 KDSRVEDARKLFDMM---PVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
+ + ++ + V+N +I Y E GRL + + +FD M R++++W +
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 212 MVSGYARNRRVDVARKLFEVM------PE-RNEVSWTAML--MGYTHSGRMREASEFFDA 262
++ Y N + A LF+ M P+ +S ++L +G + R +
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
++ + N +++ + G VD A+AVF + D +W+ +I Y + GF EA+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 323 ARMQREG-AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
M+ EG A N G ++H RL+++ D++V ++L MY K
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 382 CGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
CG L A +F + P + V WN++I + HG GE+A+ +F++M GV PD I+F+ +
Sbjct: 499 CGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
LSACS+SG V EG+ FE M+ Y + P ++HY CMVD+ GRAGQ+ A++ ++ M ++P
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQP 618
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
DA +WG+LL ACR H +DL ++A E L ++EP++ G +VLLS+MYAS G+WE V+ +R
Sbjct: 619 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRS 678
Query: 562 KIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHS 621
+ + K PG+S +EV+ K +F G N HP + + L L L+ GY PDH
Sbjct: 679 IAHGKGLRKTPGWSSMEVDNKVEVFYTG-NQTHPMYEEMYRELTALQAKLKMIGYVPDHR 737
Query: 622 FVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVT 681
FVL DVE++EK H L HSE+LAIA+ L+ P IR+ KNLRVCGDCHS K I+K+T
Sbjct: 738 FVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKIT 797
Query: 682 GREIIVRDANRFHHFKDGYCSCKDYW 707
REIIVRD+NRFHHFK+G CSC DYW
Sbjct: 798 EREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 48/369 (13%)
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV 238
TN+ C RL ++ + +NV +V+ Y V +AR F+ + R+
Sbjct: 65 TNLQSAKCLHARLVVSKQI------QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVK----------PVV--ACNEMIMG--------- 277
+W M+ GY +G E F + P V AC +I G
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALK 178
Query: 278 FGFDGDV----------DRAKAV------FEKMRERDDGTWSAMIKVYERKGFELEALGL 321
FGF DV R KAV F++M RD G+W+AMI Y + G EAL L
Sbjct: 179 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
++ A++ + G +H+ ++ + +L+V++ LI +Y +
Sbjct: 239 SNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 382 CGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
G L + +F+R ++D++ WNS+I Y + A+++F++M LS + PD ++ I +
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
S S G ++ R + K I +V + + G V+ A + +P
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NT 413
Query: 502 DAIVWGSLL 510
D I W +++
Sbjct: 414 DVISWNTII 422
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
+HARLV S+ Q++ +++ L+ +Y G++ A+ F+ +DV WN MI+GY + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 416 GEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
E + F L SG+ PD +F VL AC V +G +I + K+ +
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI-HCLALKFGFMWDVYVA 188
Query: 475 ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL-GACRT 515
A ++ L R V +A + ++MP+ D W +++ G C++
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQS 229
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/759 (34%), Positives = 398/759 (52%), Gaps = 95/759 (12%)
Query: 22 TGAISRYARIGQIENARKVF--DETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----- 74
T R + +G I AR +F + P + +N ++ + PH ++++F
Sbjct: 56 TKLTQRLSDLGAIYYARDIFLSVQRPDVFL----FNVLMRGFSVNESPHSSLSVFAHLRK 111
Query: 75 --ETTPEKNIVSWN-GMVSGFVKN--GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
+ P + ++ SGF + G V + V D ++ +++V+ Y + V
Sbjct: 112 STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD-SELLLGSNIVKMYFKFWRV 170
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGLLKDSR-VE----------------DARKLFDMMPV 172
E+A ++F RMPEK+ + W M+ G K+ VE D L D++P
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 173 ------------------------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
D V +T I Y + G+++ ALF E K ++V
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYV-LTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 209 WTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
+ M+ GY N +++ LF+ + ML G R+R +S +PV
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKEL----------MLSG----ARLR-SSTLVSLVPVSGH 334
Query: 269 VACNEMIMGFGFDGD--------------------VDRAKAVFEKMRERDDGTWSAMIKV 308
+ I G+ + ++ A+ +F++ E+ +W+AMI
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 309 YERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD 368
Y + G +A+ LF MQ+ + N G+ VH + ++F+
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 369 LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
+YV++ALI MY KCG + A+ +F+ K+ V WN+MI+GY HG G+EALN+F +M
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 429 SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVN 488
SG+ P ++F+ VL ACS++G VKEG EIF SM +Y EP ++HYACMVD+LGRAG +
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 489 DAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYA 548
A++ +E M +EP + VW +LLGACR H +LA EKL +L+P N G +VLLS++++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 549 SKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLD 608
+ + VR+ K R + K PGY+ IE+ + H+F GD + HP+ I + LE+L+
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS-HPQVKEIYEKLEKLE 693
Query: 609 GLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCG 668
G +R+AGY P+ LHDVEEEE+ + HSE+LAIA+GL+ G IR++KNLRVC
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 669 DCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
DCH+ KLI+K+T R I+VRDANRFHHFKDG CSC DYW
Sbjct: 754 DCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 65/272 (23%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------ 74
ST + Y+++ +IE+ARK+FDE+P ++ SWNAM++ Y Q A++LF
Sbjct: 357 STALTTVYSKLNEIESARKLFDESP--EKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 75 ETTP---------------------------------EKNIVSWNGMVSGFVKNGMVAEA 101
E +P E +I ++ + K G +AEA
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKD 157
RR+FD M +N V+W +M+ GY G +EA +F+ M + V++ +L
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 158 SRVEDARKLFDMM--------PVKDVVAVTNMIGGYCEEGRLEEARALFDEM---PKRNV 206
V++ ++F+ M VK + +++G G L+ A + M P +V
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG---RAGHLQRALQFIEAMSIEPGSSV 591
Query: 207 VTWTTMVSGYARNRRVDVAR----KLFEVMPE 234
W T++ ++ ++AR KLFE+ P+
Sbjct: 592 --WETLLGACRIHKDTNLARTVSEKLFELDPD 621
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/706 (33%), Positives = 384/706 (54%), Gaps = 56/706 (7%)
Query: 57 MVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSW 116
++A+Y + + A + ++ P+ I S++ ++ K + ++ VF M ++
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 117 TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT--------VMLGGLLKDSRVEDARKLFD 168
+ ++ + A ++ ++ + VS M ++ R+ DARK+FD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 169 MMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDV 224
M KDVV + ++ Y +G LEE + EM N+V+W ++SG+ R+
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 225 ARKLFE----------------VMPE-----------------------RNEVSWTAMLM 245
A +F+ V+P +++ +AM+
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 246 GYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGT 301
Y SG + F+ + CN I G +G VD+A +FE +E+ + +
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
W+++I + G ++EAL LF MQ G N HGR H V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALN 421
R +++V SALI MY KCG + ++ +FN P K++V WNS++ G+S HG +E ++
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 422 VFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLL 481
+F + + + PD ISF +LSAC G EG + F+ M +Y ++P +EHY+CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 541
GRAG++ +A +++++MP EPD+ VWG+LL +CR +DLAE+A EKL LEP+N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 542 LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIM 601
LLS++YA+KG W +V+ +R K+++ + K PG SWI+V+ + + + GD + HP+ I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKS-HPQIDQIT 654
Query: 602 KMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVM 661
+ ++ + +R +G+ P+ F LHDVEE+E+ L HSEKLA+ +GLL P+G P++V+
Sbjct: 655 EKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVI 714
Query: 662 KNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KNLR+CGDCH+ IK I+ GREI +RD NRFHHFKDG CSC D+W
Sbjct: 715 KNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/495 (19%), Positives = 192/495 (38%), Gaps = 100/495 (20%)
Query: 3 YGYSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF 62
Y +S+L + + + S G SR G I ++ + P++ + + +A F
Sbjct: 82 YSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVL----PNLFKVCAELSA-----F 132
Query: 63 QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRG 122
+ + V+ V M +++ G + +AR+VFD M ++VV+ ++++
Sbjct: 133 KVGKQIHCVSCVSGLDMDAFVQ-GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 123 YVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLF----------- 167
Y ++G +EE R+ M E N+VSW +L G + ++A +F
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 168 -----DMMP-----------------------VKDVVAVTNMIGGYCEEGRLEEARALFD 199
++P +KD ++ MI Y + G + +LF+
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMRE 255
+ ++G +RN VD A ++FE+ E+ N VSWT+++ G +G+ E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 256 ASEFFDAMP---VKP--------VVAC-NEMIMGFGFD---------------------- 281
A E F M VKP + AC N +G G
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 282 -----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPX 336
G ++ ++ VF M ++ W++++ + G E + +F + R +F
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 337 XXXXXXXXXXXXXXDHGRQVHARLVRSEF--DQDLYVASALITMYVKCGDLVRAKWIFNR 394
D G + + +++ E+ L S ++ + + G L A +
Sbjct: 492 FTSLLSACGQVGLTDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 395 YPLK-DVVMWNSMIT 408
P + D +W +++
Sbjct: 551 MPFEPDSCVWGALLN 565
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
Q HAR+++S D Y+++ LI Y A + P + ++S+I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
L +++ VF M G+ PD + C+ K G++I + C ++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI-HCVSCVSGLDMDAFVQ 154
Query: 475 ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
M + R G++ DA ++ ++M + D + +LL A
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCA 191
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 266/786 (33%), Positives = 400/786 (50%), Gaps = 104/786 (13%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET------TP 78
IS Y +G + +A + P WN+++ +Y ++ + LF TP
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 79 EKNIVSWN-------------------GMVSGFVKNGMV--------------AEARRVF 105
+ + +V+GF+ N V ++AR+VF
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK------NVVSWTVM--------- 150
D M V +VVSW S++ Y + G + A +F RM + N+ V+
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 151 --------------------LGGLLKD-----SRVEDARKLFDMMPVKDVVAVTNMIGGY 185
+G L D +++A +F M VKDVV+ M+ GY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 186 CEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARN----RRVDVARKLFEVMPERNE 237
+ GR E+A LF++M K +VVTW+ +SGYA+ + V R++ + NE
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVKPV-----------VACNEMIMGFGFDGDVDR 286
V+ ++L G G + E P+ + N++I + VD
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 287 AKAVFEKM--RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL--NFPXXXXXXX 342
A+A+F+ + +ERD TW+ MI Y + G +AL L + M E N
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQ-DLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
G+Q+HA +R++ + L+V++ LI MY KCG + A+ +F+ K+ V
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV 545
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
W S++TGY HG GEEAL +F +M G D ++ + VL ACS+SG + +G E F M
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Query: 462 KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL 521
K + V PG EHYAC+VDLLGRAG++N A+ ++E+MPMEP +VW + L CR H K++L
Sbjct: 606 KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVEL 665
Query: 522 AEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEK 581
E A EK+ +L + G Y LLS++YA+ GRW+DV +R ++ + V K PG SW+E K
Sbjct: 666 GEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIK 725
Query: 582 KAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSE 641
F GD HP I ++L ++D GY P+ F LHDV++EEK L HSE
Sbjct: 726 GTTTFFVGDKT-HPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSE 784
Query: 642 KLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYC 701
KLA+AYG+L P+G IR+ KNLRVCGDCH+A ++++ +II+RD++RFHHFK+G C
Sbjct: 785 KLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSC 844
Query: 702 SCKDYW 707
SCK YW
Sbjct: 845 SCKGYW 850
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 201/490 (41%), Gaps = 70/490 (14%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRN--VVSWTSMVRGYVQEGNVEEAERLFWRM------ 139
++S ++ G ++ A + P + V W S++R Y G + LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARAL 197
P+ + G + R ++ ++ + +V ++ Y L +AR +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-----------------EVMPE------ 234
FDEM +VV+W +++ YA+ + VA ++F V+P
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 235 -----------------RNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG 277
+N ++ Y G M EA+ F M VK VV+ N M+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 278 FGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
+ G + A +FEKM+E D TWSA I Y ++G EALG+ +M G N
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD-------QDLYVASALITMYVKCGDLV 386
HG+++H ++ D + V + LI MY KC +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 387 RAKWIFNRYPLK--DVVMWNSMITGYSQHGLGEEALNVFRDM----CLSGVPPDDISFIG 440
A+ +F+ K DVV W MI GYSQHG +AL + +M C + P+ +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT--RPNAFTISC 482
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
L AC+ ++ G++I Q + C++D+ + G ++DA + + M M
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MA 541
Query: 501 PDAIVWGSLL 510
+ + W SL+
Sbjct: 542 KNEVTWTSLM 551
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 174/409 (42%), Gaps = 58/409 (14%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRN--VVTWTTMVSGYARNRRVDVARKLFEVM--- 232
+++I Y G L A +L P + V W +++ Y N + LF +M
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 233 ---PERNEVSWTAMLMGYTHSGRMREASEFFDAMP--VKPVVACNEMIMGFGFDGDVDRA 287
P+ + G S R E++ + + V N ++ + + A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE-GAALNFPXXXXXXXXXXX 346
+ VF++M D +W+++I+ Y + G AL +F+RM E G +
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
G+Q+H V SE Q+++V + L+ MY KCG + A +F+ +KDVV WN+M
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 407 ITGYS-----------------------------------QHGLGEEALNVFRDMCLSGV 431
+ GYS Q GLG EAL V R M SG+
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE-----PGIEHYAC--MVDLLGRA 484
P++++ I VLS C+ G + G+EI KY ++ G E+ ++D+ +
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEI-HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 485 GQVNDAVEIVEKM-PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
+V+ A + + + P E D + W ++G H A A+E L+++
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD---ANKALELLSEM 466
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 264/812 (32%), Positives = 397/812 (48%), Gaps = 158/812 (19%)
Query: 19 CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
C S + R GQ+ ARKV+DE PH
Sbjct: 49 CRSNFIVEDLLRRGQVSAARKVYDEMPH-------------------------------- 76
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
KN VS N M+SG VK G V+ AR +FDAMP R VV+WT ++ Y + + +EA +LF +
Sbjct: 77 -KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 139 MPEKNV------VSWTVMLGG---------------------------------LLKD-- 157
M + V++T +L G LLK
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 158 --SRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK------------ 203
R++ A LF+ +P KD V +I GY ++G E+ LF +M +
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 204 ---------------------------RNVVTWTTMVSGYARNRRVDVARKLFEVMPERN 236
R+ ++ Y+++ RV R LF+ MPE +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 237 EVSWTAMLMGYTHSGRMREASEFFDAMPV------------------------------- 265
VS+ ++ Y+ + + + FF M
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 266 KPVVACNEMIMGFGFDGDVD---------RAKAVFEKMRERDDGTWSAMIKVYERKGFEL 316
+ ++A + I+ G + VD A+ +F+ + +R +W+A+I Y +KG
Sbjct: 376 QALLATADSILHVG-NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
L LF +M+ + G+Q+HA ++RS ++++ S L+
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 377 TMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
MY KCG + A +F P ++ V WN++I+ ++ +G GE A+ F M SG+ PD +
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
S +GVL+ACS+ G V++G E F++M Y + P +HYACM+DLLGR G+ +A +++++
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 497 MPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP-KNAGPYVLLSHMYASKGRWED 555
MP EPD I+W S+L ACR H LAE A EKL +E ++A YV +S++YA+ G WE
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 556 VEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAG 615
V V++ ++ R + K+P YSW+EV K H+F D HP I++ + L + G
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT-HPNGDEIVRKINELTAEIEREG 733
Query: 616 YSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIK 675
Y PD S V+ DV+E+ K SL YHSE+LA+A+ L+ PEG PI VMKNLR C DCH+AIK
Sbjct: 734 YKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIK 793
Query: 676 LIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
LI+K+ REI VRD +RFHHF +G CSC DYW
Sbjct: 794 LISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/741 (34%), Positives = 392/741 (52%), Gaps = 59/741 (7%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------E 75
T + Y + ++ RKVFDE R +W +++ Y + + +TLF
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKE--RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 76 TTP---------------------------------EKNIVSWNGMVSGFVKNGMVAEAR 102
T P +K I N +++ ++K G V +AR
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW-------RMPEKNVVSWTVMLGGLL 155
+FD V++VV+W SM+ GY G EA +F+ R+ E + S + L L
Sbjct: 250 ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS-VIKLCANL 308
Query: 156 KDSRVEDAR--KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTM 212
K+ R + + + D T ++ Y + + +A LF E+ NVV+WT M
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
+SG+ +N + A LF M + NE +++ +L ++ +
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS 428
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
++ + G V+ A VF + ++D WSAM+ Y + G A+ +F + +
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 329 GAALN-FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
G N F G+Q H ++S D L V+SAL+TMY K G++
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 388 AKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
A+ +F R KD+V WNSMI+GY+QHG +AL+VF++M V D ++FIGV +AC++
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWG 507
+G V+EG + F+ M ++ P EH +CMVDL RAGQ+ A++++E MP + +W
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 508 SLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
++L ACR H K +L +A EK+ ++P+++ YVLLS+MYA G W++ VR+ + R+
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDV 627
V K PGYSWIEV+ K + F+ GD + HP + I LE L L+D GY PD S+VL D+
Sbjct: 729 VKKEPGYSWIEVKNKTYSFLAGDRS-HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 628 EEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIV 687
++E K L HSE+LAIA+GL+ P+G P+ ++KNLRVCGDCH IKLIAK+ REI+V
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 688 RDANRFHHF-KDGYCSCKDYW 707
RD+NRFHHF DG CSC D+W
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 214/468 (45%), Gaps = 30/468 (6%)
Query: 91 GFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP------EKNV 144
G V + + A +FD P R+ S+ S++ G+ ++G +EA+RLF + + ++
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 145 VSWTVMLGGLLKDSRVEDARKL----FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDE 200
S + + L D R+L + DV T+++ Y + ++ R +FDE
Sbjct: 96 FSSVLKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 201 MPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREA 256
M +RNVVTWTT++SGYARN D LF M + N ++ A L G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 257 SEFFDAMPV----KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK 312
+ + K + N +I + G+V +A+ +F+K + TW++MI Y
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 313 GFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA 372
G +LEALG+F M+ L+ Q+H +V+ F D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 373 SALITMYVKCGDLVRAKWIFNRYP-LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV 431
+AL+ Y KC ++ A +F + +VV W +MI+G+ Q+ EEA+++F +M GV
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV 491
P++ ++ +L+A + ++ +K Y+ + ++D + G+V +A
Sbjct: 394 RPNEFTYSVILTALPVISPSEVHAQV---VKTNYERSSTVG--TALLDAYVKLGKVEEAA 448
Query: 492 EIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
++ + + D + W ++L + + E A++ +L P
Sbjct: 449 KVFSGID-DKDIVAWSAMLAG---YAQTGETEAAIKMFGELTKGGIKP 492
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/547 (22%), Positives = 239/547 (43%), Gaps = 114/547 (20%)
Query: 68 HQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF---------------------- 105
+ A LF+ +P ++ S+ ++ GF ++G EA+R+F
Sbjct: 44 YNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 106 ----DAMPVR-------------NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT 148
D + R +V TS+V Y++ N ++ ++F M E+NVV+WT
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 149 VMLGGLLKDSRVEDARKLFDMMP------------------------------------- 171
++ G ++S ++ LF M
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 172 -VKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF 229
+ + V+N +I Y + G + +AR LFD+ ++VVTW +M+SGYA N A +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 230 EVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV- 284
M +E S+ +++ + +R + + C+ + GF FD ++
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQ----------LHCSVVKYGFLFDQNIR 333
Query: 285 -------DRAKAVFEKMRE-RDDG------TWSAMIKVYERKGFELEALGLFARMQREGA 330
+ A+ + +R ++ G +W+AMI + + + EA+ LF+ M+R+G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
N +VHA++V++ +++ V +AL+ YVK G + A
Sbjct: 394 RPN----EFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS-G 449
+F+ KD+V W++M+ GY+Q G E A+ +F ++ G+ P++ +F +L+ C+ +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
+ +G++ F K +++ + + ++ + + G + A E+ K E D + W S+
Sbjct: 510 SMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF-KRQREKDLVSWNSM 567
Query: 510 LGACRTH 516
+ H
Sbjct: 568 ISGYAQH 574
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 59/444 (13%)
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
G RL A LFD+ P R+ ++ +++ G++R+ R A++LF
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF-------------- 81
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMI--------MGFGFDGDVD---------- 285
+ G + S F + V + C+E+ + FGF DV
Sbjct: 82 -LNIHRLGMEMDCSIFSSVLKVSATL-CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 286 ------RAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXX 339
+ VF++M+ER+ TW+ +I Y R E L LF RMQ EG N
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 340 XXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD 399
G QVH +V++ D+ + V+++LI +Y+KCG++ +A+ +F++ +K
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
VV WNSMI+GY+ +GL EAL +F M L+ V + SF V+ C+ +KE R E
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA---NLKELR-FTE 315
Query: 460 SMKC---KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+ C KY ++ + + DA+ + +++ + + W +++
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG---F 372
Query: 517 MKLDLAEVAVEKLAQLEPKNAGP-----YVLLSHMYASKGRWEDVEVVR---EKIKTRSV 568
++ D E AV+ ++++ K P V+L+ + +VV+ E+ T
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT 432
Query: 569 IKLPGYSWI-EVEKKAHMFVGGDN 591
L Y + +VE+ A +F G D+
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDD 456
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 19 CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
C S+ ++ YA+ G IE+A +VF + SWN+M++ Y Q Q +A+ +F+
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKR--QREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 79 EKNI----VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTS-----MVRGYVQEGNV 129
++ + V++ G+ + G+V E + FD M ++ T MV Y + G +
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 130 EEAERLFWRMPE-KNVVSWTVMLGGLLKDSRVEDAR----KLFDMMPVKDVVAVTNMIGG 184
E+A ++ MP W +L + E R K+ M P +D A +
Sbjct: 649 EKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP-EDSAAYVLLSNM 707
Query: 185 YCEEGRLEEARALFDEMPKRNV 206
Y E G +E + M +RNV
Sbjct: 708 YAESGDWQERAKVRKLMNERNV 729
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/647 (37%), Positives = 371/647 (57%), Gaps = 21/647 (3%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
E+N V N +V+ ++KN V AR+VFD M R+V+SW S++ GYV G E+ +F +
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 139 M----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA-----VTNMIGGYCEEG 189
M E ++ + + G DSR+ + + VK + ++ Y + G
Sbjct: 287 MLVSGIEIDLATIVSVFAGC-ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 345
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLM 245
L+ A+A+F EM R+VV++T+M++GYAR A KLFE M E + + TA+L
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 246 GYTHSGRMREASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT 301
+ E + + + N ++ + G + A+ VF +MR +D +
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGA-ALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
W+ +I Y + + EAL LF + E + + D GR++H +
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
+R+ + D +VA++L+ MY KCG L+ A +F+ KD+V W MI GY HG G+EA+
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
+F M +G+ D+ISF+ +L ACS+SG V EG F M+ + ++EP +EHYAC+VD+
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY 540
L R G + A +E MP+ PDA +WG+LL CR H + LAE EK+ +LEP+N G Y
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 541 VLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPII 600
VL++++YA +WE V+ +R++I R + K PG SWIE++ + ++FV GD++ +PE I
Sbjct: 706 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS-NPETENI 764
Query: 601 MKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRV 660
L ++ + + GYSP + L D EE EK +L HSEKLA+A G++ G IRV
Sbjct: 765 EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRV 824
Query: 661 MKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KNLRVCGDCH K ++K+T REI++RD+NRFH FKDG+CSC+ +W
Sbjct: 825 TKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 212/488 (43%), Gaps = 89/488 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+ R+ G +ENA K+ + W+ P ++ + + +
Sbjct: 68 LRRFCESGNLENAVKLL-------CVSGKWDI---------DPRTLCSVLQLCADSKSLK 111
Query: 85 WNGMVSGFVK-NGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN 143
V F++ NG V ++ N+ S S++ Y G+++EA R+F + +
Sbjct: 112 DGKEVDNFIRGNGFVIDS----------NLGSKLSLM--YTNCGDLKEASRVFDEVKIEK 159
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDMM--------------PVKDVVAVTNMIGGYCEEG 189
+ W +++ L K + LF M K ++ ++ GG G
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTH 249
+ L +RN V ++V+ Y +N+RVD ARK+F+ M ER+ +SW +++ GY
Sbjct: 220 FI-----LKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 250 SGRMREASEFF----------DAMPVKPVVA----------------------------- 270
+G + F D + V A
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
CN ++ + GD+D AKAVF +M +R ++++MI Y R+G EA+ LF M+ EG
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ + D G++VH + ++ D++V++AL+ MY KCG + A+
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSG 449
+F+ +KD++ WN++I GYS++ EAL++F + PD+ + VL AC+
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 450 KVKEGREI 457
+GREI
Sbjct: 514 AFDKGREI 521
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 192/454 (42%), Gaps = 74/454 (16%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQA-------------- 70
++ Y + ++++ARKVFDE R SWN+++ Y +
Sbjct: 237 VAFYLKNQRVDSARKVFDEMT--ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 71 -----VTLFETTPEKNIVSW--------------------NGMVSGFVKNGMVAEARRVF 105
V++F + ++S N ++ + K G + A+ VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVE 161
M R+VVS+TSM+ GY +EG EA +LF M E+ +V + T +L + ++
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 162 DARKLFDMMPVKDV---VAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
+ +++ + + D+ + V+N ++ Y + G ++EA +F EM +++++W T++ GY+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 218 RNRRVDVARKLFEVMPERNE---------------VSWTAMLMGYTHSGRMREASEFFDA 262
+N + A LF ++ E S +A G G + F D
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
N ++ + G + A +F+ + +D +W+ MI Y GF EA+ LF
Sbjct: 535 H------VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA--SALITMYV 380
+M++ G + D G + ++R E + V + ++ M
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLA 647
Query: 381 KCGDLVRAKWIFNRYPL-KDVVMWNSMITGYSQH 413
+ GDL++A P+ D +W +++ G H
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 163/380 (42%), Gaps = 58/380 (15%)
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
GD+ A VF++++ W+ ++ + G ++GLF +M G ++
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 342 XXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
G Q+H +++S F + V ++L+ Y+K + A+ +F+ +DV+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI---- 457
WNS+I GY +GL E+ L+VF M +SG+ D + + V + C+ S + GR +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 458 ------------------------FESMKCKYQ--VEPGIEHYACMVDLLGRAGQVNDAV 491
+S K ++ + + Y M+ R G +AV
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 492 EIVEKMPME---PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSH--- 545
++ E+M E PD ++L C + LD + E ++ + G + +S+
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE---WIKENDLGFDIFVSNALM 439
Query: 546 -MYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGG-DNNCHPEQPIIMKM 603
MYA G ++ E+V +++ + +I SW + +GG NC+ + + +
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDII-----SW-------NTIIGGYSKNCYANEALSLFN 487
Query: 604 LERLDGLLRDAGYSPDHSFV 623
L LL + +SPD V
Sbjct: 488 L-----LLEEKRFSPDERTV 502
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G++V + + F D + S L MY CGDL A +F+ ++ + WN ++ ++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE-SMKCKYQVEPGI 471
G ++ +F+ M SGV D +F V + S V G ++ +K + +
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
+ +V + +V+ A ++ ++M E D I W S++ ++ LAE + Q
Sbjct: 233 GN--SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIING---YVSNGLAEKGLSVFVQ 286
Query: 532 L 532
+
Sbjct: 287 M 287
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/708 (33%), Positives = 386/708 (54%), Gaps = 23/708 (3%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T +S Y G I AR VF++ P R T +NAM+ + + + A+ LF +
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 82 IVSWNGMVSGFVKN-GMVAEARRV---FDAMPVRNVVSWTSMVRGYV---------QEGN 128
N + + +VA+ + F A +++ + + V +
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 129 VEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-DVVAVTNMIGGYCE 187
+ A ++F + EK+ SWT M+ G +K+ + +L + M +VA MI GY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 188 EGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW--- 240
G +EA + M + T+ +++ A + + +++ + R + S+
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
+++ Y G+ EA F+ MP K +V+ N ++ G+ G + AK +F++M+E++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
+W MI GF E L LF+ M+REG +G+Q HA+L
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
++ FD L +ALITMY KCG + A+ +F P D V WN++I QHG G EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
+V+ +M G+ PD I+ + VL+ACS++G V +GR+ F+SM+ Y++ PG +HYA ++DL
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY 540
L R+G+ +DA ++E +P +P A +W +LL CR H ++L +A +KL L P++ G Y
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTY 623
Query: 541 VLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPII 600
+LLS+M+A+ G+WE+V VR+ ++ R V K SWIE+E + H F+ D+ HPE +
Sbjct: 624 MLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFL-VDDTSHPEAEAV 682
Query: 601 MKMLERLDGLLRDAGYSPDHSFVLHDVEEE-EKTHSLGYHSEKLAIAYGLLKVPEGMPIR 659
L+ L +R GY PD SFVLHDVE + K L HSEK+A+A+GL+K+P G IR
Sbjct: 683 YIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742
Query: 660 VMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
+ KNLR CGDCH+ + ++ V R+II+RD RFHHF++G CSC ++W
Sbjct: 743 IFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 174/428 (40%), Gaps = 78/428 (18%)
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP 264
N++T+ + NR +DV Y S + A + FD +
Sbjct: 39 NIITFGFQPRAHILNRLIDV----------------------YCKSSELNYARQLFDEIS 76
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEK--MRERDDGTWSAMIKVYERKGFELEALGLF 322
+A M+ G+ GD+ A+ VFEK + RD ++AMI + A+ LF
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 323 ARMQREG-AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
+M+ EG NF Q HA ++S V++AL+++Y K
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 382 CGD----LVRAKWIFNRYPLKD--------------------------------VVMWNS 405
C L A+ +F+ KD +V +N+
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 406 MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKY 465
MI+GY G +EAL + R M SG+ D+ ++ V+ AC+ +G ++ G+++ + +
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 466 QVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVA 525
++ +V L + G+ ++A I EKMP + D + W +LL + + A++
Sbjct: 317 DFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLI 373
Query: 526 VEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHM 585
+ +++ KN ++++ A G E E +K S +K G+ E +
Sbjct: 374 FK---EMKEKNILSWMIMISGLAENGFGE------EGLKLFSCMKREGF-----EPCDYA 419
Query: 586 FVGGDNNC 593
F G +C
Sbjct: 420 FSGAIKSC 427
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/747 (34%), Positives = 389/747 (52%), Gaps = 63/747 (8%)
Query: 13 VQVRFQCTSTGA--ISRYARI--GQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPH 68
VQ++ QC GA SRY ++ G I A + T +N +V AY
Sbjct: 8 VQIK-QCIGLGARNQSRYVKMIHGNIIRALP--------YPETFLYNNIVHAYALMKSST 58
Query: 69 QAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGN 128
A +F+ P+ N+ SWN ++ + K G+++E F+ +P R+ V+W ++ GY G
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGL 118
Query: 129 VEEAERLFWRMPEKNVVSWT-VMLGGLLKDSRVEDARKLFDMMPVKDV--------VAVT 179
V A + + M + T V L +LK S L + + + + +
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 180 NMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
++ Y G + +A+ +F + RN V + +++ G ++ A +LF M E++ VS
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVS 237
Query: 240 WTAMLMGYTHSGRMREASEFF----------DAMPVKPVV-ACNEM------------IM 276
W AM+ G +G +EA E F D P V+ AC + I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 277 GFGFDGDV----------------DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALG 320
F + AK VF++M++++ +W+AM+ Y + G EA+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
+F MQR G + + G Q H + + S + V+++L+T+Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 381 KCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIG 440
KCGD+ + +FN ++D V W +M++ Y+Q G E + +F M G+ PD ++ G
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
V+SACS +G V++G+ F+ M +Y + P I HY+CM+DL R+G++ +A+ + MP
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP 537
Query: 501 PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVR 560
PDAI W +LL ACR L++ + A E L +L+P + Y LLS +YASKG+W+ V +R
Sbjct: 538 PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLR 597
Query: 561 EKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDH 620
++ ++V K PG SWI+ + K H F D+ P I LE L+ + D GY PD
Sbjct: 598 RGMREKNVKKEPGQSWIKWKGKLHSF-SADDESSPYLDQIYAKLEELNNKIIDNGYKPDT 656
Query: 621 SFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKV 680
SFV HDVEE K L YHSE+LAIA+GL+ VP G PIRV KNLRVC DCH+A K I+ V
Sbjct: 657 SFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSV 716
Query: 681 TGREIIVRDANRFHHFKDGYCSCKDYW 707
TGREI+VRDA RFH FKDG CSC D+W
Sbjct: 717 TGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 59/317 (18%)
Query: 8 LRVCMVQVRFQ---CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQA 64
+ C+++ FQ + I Y + + A+ VFD + SW AMV Y Q
Sbjct: 292 IHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ--KNVVSWTAMVVGYGQT 349
Query: 65 HQPHQAVTLF-----------------ETTPEKNIVSW---------------------- 85
+ +AV +F + N+ S
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N +V+ + K G + ++ R+F+ M VR+ VSWT+MV Y Q G E +LF +M + +
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 146 SWTVMLGGLL----KDSRVEDARKLFDMMP-----VKDVVAVTNMIGGYCEEGRLEEARA 196
V L G++ + VE ++ F +M V + + MI + GRLEEA
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 197 LFDEMP-KRNVVTWTTMVSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTHSG 251
+ MP + + WTT++S +++ A L E+ P + +T + Y G
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH-HPAGYTLLSSIYASKG 588
Query: 252 RMREASEFFDAMPVKPV 268
+ ++ M K V
Sbjct: 589 KWDSVAQLRRGMREKNV 605
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/637 (37%), Positives = 361/637 (56%), Gaps = 58/637 (9%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKD--SRVEDA 163
+V SW S++ + G+ EA F M P ++ + L D S +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 164 RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVD 223
++ F D+ + +I Y G+LE+AR +FDE+PKRN+V+WT+M+ GY N
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 224 VARKLF-EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV-ACN--------E 273
A LF +++ + N+ + + F D+M + V+ AC+ E
Sbjct: 160 DAVSLFKDLLVDEND----------------DDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 274 MIMGF----GFD------------------GDVDRAKAVFEKMRERDDGTWSAMIKVYER 311
I F GFD G V A+ +F+++ ++D ++++++ VY +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 312 KGFELEALGLFARM-QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLY 370
G EA +F R+ + + N G+ +H +++R + D+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG 430
V +++I MY KCG + A+ F+R K+V W +MI GY HG +AL +F M SG
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 431 VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDA 490
V P+ I+F+ VL+ACS++G EG F +MK ++ VEPG+EHY CMVDLLGRAG + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 491 VEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASK 550
+++++M M+PD+I+W SLL ACR H ++LAE++V +L +L+ N G Y+LLSH+YA
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADA 503
Query: 551 GRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGL 610
GRW+DVE VR +K R ++K PG+S +E+ + H+F+ GD HP++ I + L L+
Sbjct: 504 GRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEE-HPQREKIYEFLAELNRK 562
Query: 611 LRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDC 670
L +AGY + S V HDV+EEEK +L HSEKLAIA+G++ G + V+KNLRVC DC
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 671 HSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
H+ IKLI+K+ RE +VRDA RFHHFKDG CSC DYW
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 76/357 (21%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET--- 76
S+ I Y+ G++E+ARKVFDE P R SW +M+ Y AV+LF+
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 77 -------------------------TPEKNIVS-----------------WNGMVSGFVK 94
P K + N ++ + K
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
Query: 95 NGM--VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW----- 147
G VA AR++FD + ++ VS+ S++ Y Q G EA +F R+ + VV++
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 148 -TVML-----GGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
TV+L G L + D ++ M DV+ T++I YC+ GR+E AR FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHD--QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 202 PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREAS 257
+NV +WT M++GY + A +LF M + N +++ ++L +H+G E
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 258 EFFDAMP----VKPVV---ACNEMIMGFGFDGDVDRAKAVFEKMRERDDG-TWSAMI 306
+F+AM V+P + C M+ G G + +A + ++M+ + D WS+++
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGC--MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 175/443 (39%), Gaps = 75/443 (16%)
Query: 25 ISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAA------YFQAHQPHQAVTLFET 76
I+ AR G A F + + T SS+ + A F Q HQ +F
Sbjct: 48 IADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGY 107
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
+ +I + ++ + G + +AR+VFD +P RN+VSWTSM+RGY GN +A LF
Sbjct: 108 --QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMI--GGYCEEGRLEEA 194
LL D +D D M + V++ + + G E
Sbjct: 166 ---------------KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRR--VDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
+ FD R V T++ YA+ V VARK+F+ + +++ VS+ +++ Y SG
Sbjct: 211 KRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 253 MREASEFFDAMPVKPVVACN------------------------EMIMGFGFDGDV---- 284
EA E F + VV N + ++ G + DV
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 285 ------------DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+ A+ F++M+ ++ +W+AMI Y G +AL LF M G
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 333 NFPXXXXXXXXXXXXXXXDHG-RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI 391
N+ G R +A R + L ++ + + G L +A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 392 FNRYPLK-DVVMWNSMITGYSQH 413
R +K D ++W+S++ H
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIH 469
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 380/699 (54%), Gaps = 45/699 (6%)
Query: 24 AISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV 83
A++ + +E ARKVFDE P + +WN ++ AY P ++ F
Sbjct: 70 AMAALSSFASLEYARKVFDEIPK--PNSFAWNTLIRAYASGPDPVLSIWAFL-------- 119
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN 143
MV+E++ P N ++ +++ + ++ + L M K+
Sbjct: 120 ------------DMVSESQ----CYP--NKYTFPFLIKAAAEVSSLSLGQSLHG-MAVKS 160
Query: 144 VVSWTVMLGGLL-----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF 198
V V + L ++ A K+F + KDVV+ +MI G+ ++G ++A LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 199 DEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPE-RNEVSWT---AMLMGYTHS 250
+M +V VT ++S A+ R ++ R++ + E R V+ T AML YT
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 251 GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE 310
G + +A FDAM K V M+ G+ D + A+ V M ++D W+A+I YE
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 311 RKGFELEALGLFARMQ-REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDL 369
+ G EAL +F +Q ++ LN + GR +H+ + + +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 370 YVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLS 429
+V SALI MY KCGDL +++ +FN +DV +W++MI G + HG G EA+++F M +
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 430 GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVND 489
V P+ ++F V ACS++G V E +F M+ Y + P +HYAC+VD+LGR+G +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 490 AVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYAS 549
AV+ +E MP+ P VWG+LLGAC+ H L+LAE+A +L +LEP+N G +VLLS++YA
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 550 KGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDG 609
G+WE+V +R+ ++ + K PG S IE++ H F+ GD N HP + L +
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD-NAHPMSEKVYGKLHEVME 639
Query: 610 LLRDAGYSPDHSFVLHDVEEEE-KTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCG 668
L+ GY P+ S VL +EEEE K SL HSEKLAI YGL+ IRV+KNLRVCG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699
Query: 669 DCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
DCHS KLI+++ REIIVRD RFHHF++G CSC D+W
Sbjct: 700 DCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 25/310 (8%)
Query: 20 TSTGAISRYARIGQIENARKV--FDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T G +S A+I +E R+V + E ++ + NAM+ Y + A LF+
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
EK+ V+W M+ G+ + AR V ++MP +++V+W +++ Y Q G EA +F
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 138 RMPEK-----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV----AVTNMIGGYCEE 188
+ + N ++ L + +E R + + + + +I Y +
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYAR----NRRVDVARKLFEVMPERNEVSWTAML 244
G LE++R +F+ + KR+V W+ M+ G A N VD+ K+ E + N V++T +
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 245 MGYTHSGRMREASEFFDAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-E 296
+H+G + EA F M P + AC ++ G G +++A E M
Sbjct: 474 CACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC--IVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 297 RDDGTWSAMI 306
W A++
Sbjct: 532 PSTSVWGALL 541
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 361/648 (55%), Gaps = 28/648 (4%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP 140
++ + G+ + + K V EAR+VFD MP R++VSW ++V GY Q G A + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 141 EKNVVSWTVMLGGLL------------KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEE 188
E+N+ + + +L K+ R FD + V T ++ Y +
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL----VNISTALVDMYAKC 284
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
G LE AR LFD M +RNVV+W +M+ Y +N A +F+ M + +MG
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 249 HS----GRMREASEFFDAMPV-----KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
H+ G + E F + V + V N +I + +VD A ++F K++ R
Sbjct: 345 HACADLGDL-ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
+W+AMI + + G ++AL F++M+ + H + +H
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEA 419
++RS D++++V +AL+ MY KCG ++ A+ IF+ + V WN+MI GY HG G+ A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 420 LNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD 479
L +F +M + P+ ++F+ V+SACS+SG V+ G + F MK Y +E ++HY MVD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
LLGRAG++N+A + + +MP++P V+G++LGAC+ H ++ AE A E+L +L P + G
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 540 YVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPI 599
+VLL+++Y + WE V VR + + + K PG S +E++ + H F G + HP+
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG-STAHPDSKK 702
Query: 600 IMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIR 659
I LE+L +++AGY PD + VL VE + K L HSEKLAI++GLL G I
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 660 VMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
V KNLRVC DCH+A K I+ VTGREI+VRD RFHHFK+G CSC DYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 210/477 (44%), Gaps = 66/477 (13%)
Query: 117 TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF------DMM 170
T +V + + G+V+EA R+F + K V + ML G K S ++ A + F D+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 171 PV---------------------------------KDVVAVTNMIGGYCEEGRLEEARAL 197
PV D+ A+T + Y + ++ EAR +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNE----VSWTAMLMGYT----- 248
FD MP+R++V+W T+V+GY++N +A ++ + M E N ++ ++L +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 249 ------HSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
H MR FD++ V ++ + G ++ A+ +F+ M ER+ +W
Sbjct: 253 SVGKEIHGYAMRSG---FDSL----VNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
++MI Y + EA+ +F +M EG + GR +H V
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
D+++ V ++LI+MY KC ++ A +F + + +V WN+MI G++Q+G +ALN
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLG 482
F M V PD +++ V++A + + I + + ++ + +VD+
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYA 484
Query: 483 RAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ G + A I + M E W +++ TH + A+E +++ P
Sbjct: 485 KCGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTH---GFGKAALELFEEMQKGTIKP 537
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 159/362 (43%), Gaps = 59/362 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG + YA+ Q+ ARKVFD P R SWN +VA Y Q A+ + ++ E+N
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 82 I-------------------------VSWNGMVSGF--------------VKNGMVAEAR 102
+ + M SGF K G + AR
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTV-MLGGLLKDSRVE 161
++FD M RNVVSW SM+ YVQ N +EA +F +M ++ V V ++G L + +
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 162 DAR--KLFDMMPV-----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
D + + V ++V V ++I YC+ ++ A ++F ++ R +V+W M+
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 215 GYARNRRVDVARKLFEVMPER----NEVSWTAML-----MGYTHSGRMREASEFFDAMPV 265
G+A+N R A F M R + ++ +++ + TH + +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD- 470
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
K V ++ + G + A+ +F+ M ER TW+AMI Y GF AL LF M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 326 QR 327
Q+
Sbjct: 531 QK 532
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 29/331 (8%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
ST + YA+ G +E AR++FD + R SWN+M+ AY Q P +A+ +F+ ++
Sbjct: 274 STALVDMYAKCGSLETARQLFDGM--LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 81 NI----VSWNGMVSGFVKNGMVAEARRVFDAMPV-----RNVVSWTSMVRGYVQEGNVEE 131
+ VS G + G + E R + V RNV S++ Y + V+
Sbjct: 332 GVKPTDVSVMGALHACADLGDL-ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 132 AERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCE 187
A +F ++ + +VSW M+ G ++ R DA F M + D ++I E
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 188 EGRLEEAR----ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
A+ + +NV T +V YA+ + +AR +F++M ER+ +W AM
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 244 LMGYTHSGRMREASEFFDAM---PVKPV-VACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
+ GY G + A E F+ M +KP V +I G V+ F M+E
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 300 -----GTWSAMIKVYERKGFELEALGLFARM 325
+ AM+ + R G EA +M
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 23/330 (6%)
Query: 23 GAISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
GA+ A +G +E R + + + R S N++++ Y + + A ++F +
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAE--- 133
+VSWN M+ GF +NG +A F M R V ++ S++ + A+
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 134 -RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLE 192
+ +KNV T ++ K + AR +FDMM + V MI GY G +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 193 EARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----WTAM 243
A LF+EM K + VT+ +++S + + V+ K F +M E + + AM
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG-FGFDGDVDRAKAVFEKMRER--DDG 300
+ +GR+ EA +F MPVKP V ++G +V+ A+ E++ E DDG
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 301 TWSAMIKVYERKGFELEALG-LFARMQREG 329
+ ++ R E +G + M R+G
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQG 671
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 262/740 (35%), Positives = 392/740 (52%), Gaps = 62/740 (8%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+ Y+R+G + AR+VFDE P R SWN++++ Y +A+ ++ IV
Sbjct: 148 VDMYSRMGLLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 85 WNGMVSG---------FVKNG---------------------MVA---------EARRVF 105
+ VS VK G +VA +ARRVF
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR-----MPEKNVVSWTVMLGGLLKDSRV 160
D M VR+ VS+ +M+ GY++ VEE+ R+F P+ VS + G L+D +
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSL 325
Query: 161 EDARKLFDMMPVKDVV---AVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
A+ +++ M V V N +I Y + G + AR +F+ M ++ V+W +++SGY
Sbjct: 326 --AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 217 ARNRRVDVARKLFEVMPERNE-VSWTAMLMGYTHSGRMREA-------SEFFDAMPVKPV 268
++ + A KLF++M E LM + S R+ + S + +
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
N +I + G+V + +F M D TW+ +I R G L + +M++
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
+ G+++H L+R ++ +L + +ALI MY KCG L +
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+F R +DVV W MI Y +G GE+AL F DM SG+ PD + FI ++ ACS+S
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G V EG FE MK Y+++P IEHYAC+VDLL R+ +++ A E ++ MP++PDA +W S
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
+L ACRT ++ AE ++ +L P + G +L S+ YA+ +W+ V ++R+ +K + +
Sbjct: 684 VLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHI 743
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDV- 627
K PGYSWIEV K H+F GD++ P+ I K LE L L+ GY PD V ++
Sbjct: 744 TKNPGYSWIEVGKNVHVFSSGDDSA-PQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLE 802
Query: 628 EEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIV 687
EEEEK + HSE+LAIA+GLL G P++VMKNLRVCGDCH KLI+K+ GREI+V
Sbjct: 803 EEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILV 862
Query: 688 RDANRFHHFKDGYCSCKDYW 707
RDANRFH FKDG CSCKD W
Sbjct: 863 RDANRFHLFKDGTCSCKDRW 882
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 137/600 (22%), Positives = 250/600 (41%), Gaps = 97/600 (16%)
Query: 57 MVAAYFQAHQPHQAVTLFE-TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV-- 113
++ Y +P ++++F +P KN+ WN ++ F KNG+ EA + + V
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 114 --VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD--SR---VEDARKL 166
++ S+++ + E + ++ ++ + S + +G L D SR + AR++
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES-DLFVGNALVDMYSRMGLLTRARQV 163
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG----------- 215
FD MPV+D+V+ ++I GY G EEA ++ E+ +V + VS
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 216 ----------------------------YARNRRVDVARKLFEVMPERNEVSWTAMLMGY 247
Y + RR AR++F+ M R+ VS+ M+ GY
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 248 THSGRMREASEFF---------DAMPVKPVV-AC-------------------------- 271
+ E+ F D + V V+ AC
Sbjct: 284 LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 272 --NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
N +I + GD+ A+ VF M +D +W+++I Y + G +EA+ LF M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ G+ +H+ ++S DL V++ALI MY KCG++ +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
IF+ D V WN++I+ + G L V M S V PD +F+ L C+
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
+ G+EI + ++ E ++ ++++ + G + ++ + E+M D + W +
Sbjct: 524 AKRLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGM 581
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGP--YVLLSHMYAS--KGRWEDVEVVREKIKT 565
+ A + + E A+E A +E P V ++ +YA G ++ EK+KT
Sbjct: 582 IYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY-PLKDVVMWNSMITGYSQ 412
R++HA ++ D + + LI Y + + +F R P K+V +WNS+I +S+
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+GL EAL + + S V PD +F V+ AC+ + G ++E + E +
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI-LDMGFESDLF 142
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+VD+ R G + A ++ ++MP+ D + W SL+ +H
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSH 185
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/656 (36%), Positives = 354/656 (53%), Gaps = 50/656 (7%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
A VF + N++ W +M RG+ + A +L+ M ++ + +LK
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 161 EDARK--------LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
A K + + D+ T++I Y + GRLE+A +FD+ P R+VV++T +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP-- 267
+ GYA ++ A+KLF+ +P ++ VSW AM+ GY +G +EA E F M V+P
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 268 ------VVAC----------------------------NEMIMGFGFDGDVDRAKAVFEK 293
V AC N +I + G+++ A +FE+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
+ +D +W+ +I Y EAL LF M R G N D G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 354 RQVHARLVR--SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
R +H + + + ++LI MY KCGD+ A +FN K + WN+MI G++
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
HG + + ++F M G+ PDDI+F+G+LSACS+SG + GR IF +M Y++ P +
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
EHY CM+DLLG +G +A E++ M MEPD ++W SLL AC+ H ++L E E L +
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 532 LEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDN 591
+EP+N G YVLLS++YAS GRW +V R + + + K+PG S IE++ H F+ GD
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD- 625
Query: 592 NCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLK 651
HP I MLE ++ LL AG+ PD S VL ++EEE K +L +HSEKLAIA+GL+
Sbjct: 626 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 685
Query: 652 VPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
G + ++KNLRVC +CH A KLI+K+ REII RD RFHHF+DG CSC DYW
Sbjct: 686 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T IS Y + G++E+A KVFD++PH R S+ A++ Y A LF+ P K+
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPH--RDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERLFW 137
+VSWN M+SG+ + G EA +F M NV + ++V Q G++E ++
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 138 RMPEKNVVSWTVMLGGLL----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
+ + S ++ L+ K +E A LF+ +P KDV++ +IGGY +E
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 194 ARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER-----NEVSW-TAM 243
A LF EM + N VT +++ A +D+ R + + +R N S T++
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDD 299
+ Y G + A + F+++ K + + N MI GF G D + +F +MR + DD
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 300 GTWSAMIKVYERKG 313
T+ ++ G
Sbjct: 471 ITFVGLLSACSHSG 484
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 20/294 (6%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
++++ Y Q + A +F+ +P +++VS+ ++ G+ G + A+++FD +PV++VV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKLF--- 167
SW +M+ GY + GN +EA LF M + NV + ++ + +E R++
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 168 -DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
D ++ V +I Y + G LE A LF+ +P ++V++W T++ GY A
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 227 KLFEVMPER----NEVSWTAMLMGYTHSGRM---REASEFFDAMPVKPVVACN----EMI 275
LF+ M N+V+ ++L H G + R + D +K V + +I
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR-LKGVTNASSLRTSLI 411
Query: 276 MGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+ GD++ A VF + + +W+AMI + G + LF+RM++ G
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/633 (35%), Positives = 364/633 (57%), Gaps = 26/633 (4%)
Query: 96 GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
G + AR+VFD +P + W +++RGY + + ++A ++ M V + LL
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 156 KD----SRVEDAR----KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD--EMPKRN 205
K S ++ R ++F + DV +I Y + RL AR +F+ +P+R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 206 VVTWTTMVSGYARNRRVDVARKLFEVMPERN-EVSWTAM---LMGYT-----HSGRMREA 256
+V+WT +VS YA+N A ++F M + + + W A+ L +T GR A
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 257 SEFFDAMPVKP--VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGF 314
S + ++P +++ N M + G V AK +F+KM+ + W+AMI Y + G+
Sbjct: 247 SVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 315 ELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASA 374
EA+ +F M + + + R ++ + RS++ D++++SA
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 375 LITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
LI M+ KCG + A+ +F+R +DVV+W++MI GY HG EA++++R M GV P+
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
D++F+G+L AC++SG V+EG F M +++ P +HYAC++DLLGRAG ++ A E++
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 495 EKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
+ MP++P VWG+LL AC+ H ++L E A ++L ++P N G YV LS++YA+ W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 555 DVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDA 614
V VR ++K + + K G SW+EV + F GD + HP I + +E ++ L++
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKS-HPRYEEIERQVEWIESRLKEG 601
Query: 615 GYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAI 674
G+ + LHD+ +EE +L HSE++AIAYGL+ P+G P+R+ KNLR C +CH+A
Sbjct: 602 GFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAAT 661
Query: 675 KLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KLI+K+ REI+VRD NRFHHFKDG CSC DYW
Sbjct: 662 KLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 175/350 (50%), Gaps = 26/350 (7%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP---- 233
+T +I G + AR +FD++P+ + W ++ GY+RN A ++ M
Sbjct: 56 ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115
Query: 234 ERNEVSWTAML-----MGYTHSGRMREASEF---FDAMPVKPVVACNEMIMGFGFDGDVD 285
+ ++ +L + + GR A F FDA V N +I + +
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA----DVFVQNGLIALYAKCRRLG 171
Query: 286 RAKAVFE--KMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
A+ VFE + ER +W+A++ Y + G +EAL +F++M++ ++
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 344 XXXXXXXDHGRQVHARLVRS--EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
GR +HA +V+ E + DL + +L TMY KCG + AK +F++ +++
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+WN+MI+GY+++G EA+++F +M V PD IS +SAC+ G +++ R ++E +
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 462 -KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ Y+ + I + ++D+ + G V A + ++ ++ D +VW +++
Sbjct: 350 GRSDYRDDVFIS--SALIDMFAKCGSVEGARLVFDR-TLDRDVVVWSAMI 396
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 62/349 (17%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
G I+ YA+ ++ +AR VF+ P RT SW A+V+AY Q +P +A+ +F + +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 82 I-VSWNGMVS--------------------------------------GFVKNGMVAEAR 102
+ W +VS + K G VA A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDS 158
+FD M N++ W +M+ GY + G EA +F M K+V +S T + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 159 RVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+E AR +++ + DV + +I + + G +E AR +FD R+VV W+ M+
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 215 GYARNRRVDVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFDAM------ 263
GY + R A L+ M ER N+V++ +LM HSG +RE FF+ M
Sbjct: 398 GYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT-WSAMIKVYER 311
P + AC +I G G +D+A V + M + T W A++ ++
Sbjct: 457 PQQQHYAC--VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 190/461 (41%), Gaps = 67/461 (14%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------ 75
T I + G I AR+VFD+ P WNA++ Y + + A+ ++
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQ--IFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 76 ------TTP---------------------------EKNIVSWNGMVSGFVKNGMVAEAR 102
T P + ++ NG+++ + K + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 103 RVFDAMPV--RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-VSWTVMLGGL----- 154
VF+ +P+ R +VSWT++V Y Q G EA +F +M + +V W ++ L
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 155 ---LKDSRVEDARKLFDMMPVK-DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
LK R A + + ++ D++ N + C G++ A+ LFD+M N++ W
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC--GQVATAKILFDKMKSPNLILWN 292
Query: 211 TMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
M+SGYA+N A +F M + + +S T+ + G + +A ++ +
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 267 ----PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
V + +I F G V+ A+ VF++ +RD WSAMI Y G EA+ L+
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
M+R G N G R+ + + + +I + +
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 383 GDLVRAKWIFNRYPLK-DVVMWNSMITGYSQH---GLGEEA 419
G L +A + P++ V +W ++++ +H LGE A
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+Q+HARL+ ++ + LI GD+ A+ +F+ P + WN++I GYS++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM------------ 461
++AL ++ +M L+ V PD +F +L ACS ++ GR + +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 462 --------KCKY------------QVEPGIEHYACMVDLLGRAGQVNDAVEI---VEKMP 498
KC+ E I + +V + G+ +A+EI + KM
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 499 MEPDAIVWGSLLGA--CRTHMKLDLA-EVAVEKLA-QLEPKNAGPYVLLSHMYASKGRWE 554
++PD + S+L A C +K + +V K+ ++EP + L+ MYA G+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD---LLISLNTMYAKCGQVA 274
Query: 555 DVEVVREKIKTRSVI 569
+++ +K+K+ ++I
Sbjct: 275 TAKILFDKMKSPNLI 289
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 64/264 (24%)
Query: 28 YARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI--- 82
YA+ GQ+ A+ +FD+ +P++ WNAM++ Y + +A+ +F K++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNL----ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 83 -VSWNGMVSG-----------------------------------FVKNGMVAEARRVFD 106
+S +S F K G V AR VFD
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 107 AMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL----KDSRVED 162
R+VV W++M+ GY G EA L+ M V V GLL V +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 163 ARKLFDMMPVKDV-------VAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVS 214
F+ M + V +++G G L++A + MP + V W ++S
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLG---RAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 215 GYARNRRVDV----ARKLFEVMPE 234
++R V++ A++LF + P
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPS 523
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/623 (37%), Positives = 348/623 (55%), Gaps = 39/623 (6%)
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGG 153
VA AR+VFD +P RNV+ M+R YV G E ++F M NV ++ +L
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 154 LLKDSRVEDARKLF---DMMPVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTW 209
+ RK+ + + + V N ++ Y + G L EAR + DEM +R+VV+W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
++V GYA+N+R D A ++ M E ++S A M +E
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGTMASLLPAVSNTTTE----------- 257
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+V K +F KM ++ +W+ MI VY + +EA+ L++RM+ +G
Sbjct: 258 -------------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ G+++H + R + +L + +ALI MY KCG L +A+
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR 364
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F +DVV W +MI+ Y G G +A+ +F + SG+ PD I+F+ L+ACS++G
Sbjct: 365 DVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
++EGR F+ M Y++ P +EH ACMVDLLGRAG+V +A ++ M MEP+ VWG+L
Sbjct: 425 LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL 484
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
LGACR H D+ +A +KL QL P+ +G YVLLS++YA GRWE+V +R +K++ +
Sbjct: 485 LGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLK 544
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE 629
K PG S +EV + H F+ GD + HP+ I + L+ L +++ GY PD LHDVEE
Sbjct: 545 KNPGASNVEVNRIIHTFLVGDRS-HPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPE-----GMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684
E+K L HSEKLAI + L+ E IR+ KNLR+CGDCH A KLI+++T RE
Sbjct: 604 EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSRE 663
Query: 685 IIVRDANRFHHFKDGYCSCKDYW 707
II+RD NRFH F+ G CSC DYW
Sbjct: 664 IIIRDTNRFHVFRFGVCSCGDYW 686
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 162/408 (39%), Gaps = 98/408 (24%)
Query: 17 FQCTSTGAIS---RYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL 73
+C S+ + YA + + +ARKVFDE P R N M+ +Y + V +
Sbjct: 70 LRCNSSLGVKLMRAYASLKDVASARKVFDEIP--ERNVIIINVMIRSYVNNGFYGEGVKV 127
Query: 74 FETTPEKNI---------------------------------------VSWNGMVSGFVK 94
F T N+ NG+VS + K
Sbjct: 128 FGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 95 NGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA---------------------- 132
G ++EAR V D M R+VVSW S+V GY Q ++A
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 133 ---------------ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK---- 173
+ +F++M +K++VSW VM+G +K++ +A +L+ M
Sbjct: 248 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLF 229
D V++T+++ + L + + + ++ N++ ++ YA+ ++ AR +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 230 EVMPERNEVSWTAMLMGYTHSGRMREASEFF----DAMPVKPVVACNEMIMGFGFDGDVD 285
E M R+ VSWTAM+ Y SGR +A F D+ V +A + G ++
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 286 RAKAVFEKMRERDDGT-----WSAMIKVYERKGFELEALGLFARMQRE 328
++ F+ M + T + M+ + R G EA M E
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM---QREGAALNFPXXXX 339
DV A+ VF+++ ER+ + MI+ Y GF E + +F M FP
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 340 XXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD 399
GR++H + L+V + L++MY KCG L A+ + + +D
Sbjct: 149 ACSCSGTIVI---GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG--KVKEGREI 457
VV WNS++ GY+Q+ ++AL V R+M + D + +L A S + V +++
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 458 FESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLLGACR 514
F M K V + M+ + + +AVE+ +M EPDA+ S+L AC
Sbjct: 266 FFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSH----MYASKGRWEDVEVVREKIKTRSVI 569
L L + + +E K P +LL + MYA G E V E +K+R V+
Sbjct: 321 DTSALSLGK---KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
R VH+R++ + + + L+ Y D+ A+ +F+ P ++V++ N MI Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G E + VF MC V PD +F VL ACS SG + GR+I S K + +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT-KVGLSSTLFV 177
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+V + G+ G +++A ++++M D + W SL+ + + D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLVVGYAQNQRFDDA 225
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 62/275 (22%)
Query: 49 RTTSSWNAMVAAYFQAHQPHQAVTLFETT------PEK---------------------- 80
++ SWN M+ Y + P +AV L+ P+
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 81 -----------NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
N++ N ++ + K G + +AR VF+ M R+VVSWT+M+ Y G
Sbjct: 332 HGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 130 EEAERLFWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMP--------VKDVVA 177
+A LF ++ + +V ++ L +E+ R F +M ++ +
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC 451
Query: 178 VTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVSGYARNRRVDV----ARKLFEVM 232
+ +++G G+++EA +M + N W ++ + D+ A KLF++
Sbjct: 452 MVDLLG---RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 233 PERNEVSWTAMLMG-YTHSGRMREASEFFDAMPVK 266
PE++ + +L Y +GR E + + M K
Sbjct: 509 PEQS--GYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/746 (32%), Positives = 378/746 (50%), Gaps = 101/746 (13%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------ 108
NA+V+ YF A +F +++ V++N +++G + G +A +F M
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 109 PVRNVVSWT--------SMVRG-------------------------YVQEGNVEEAERL 135
P N ++ ++ RG Y + ++E A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 136 FWRMPEKNVVSWTVML--GGLLKDSRVEDARKLFDMMPVKDVV----------------- 176
F +NVV W VML GLL D R ++ ++F M ++++V
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLR--NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 177 ----------------------AVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ +I Y + G+L+ A + ++VV+WTTM++
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 215 GYARNRRVDVARKLFEVMPER----------NEVSWTAMLMGYTHSGRMRE---ASEFFD 261
GY + D A F M +R N VS A L ++ S F
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624
Query: 262 AMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGL 321
+P + N ++ + G ++ + FE+ D+ W+A++ +++ G EAL +
Sbjct: 625 DLPFQ-----NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
F RM REG N G+QVHA + ++ +D + V +ALI+MY K
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 382 CGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
CG + A+ F K+ V WN++I YS+HG G EAL+ F M S V P+ ++ +GV
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGV 799
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
LSACS+ G V +G FESM +Y + P EHY C+VD+L RAG ++ A E +++MP++P
Sbjct: 800 LSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP 859
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
DA+VW +LL AC H +++ E A L +LEP+++ YVLLS++YA +W+ ++ R+
Sbjct: 860 DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQ 919
Query: 562 KIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHS 621
K+K + V K PG SWIEV+ H F GD N HP I + + L + GY D
Sbjct: 920 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQN-HPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 622 FVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVT 681
+L++++ E+K + HSEKLAI++GLL +P +PI VMKNLRVC DCH+ IK ++KV+
Sbjct: 979 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 682 GREIIVRDANRFHHFKDGYCSCKDYW 707
REIIVRDA RFHHF+ G CSCKDYW
Sbjct: 1039 NREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 225/553 (40%), Gaps = 66/553 (11%)
Query: 19 CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
C S Y G + A KVFDE P RT +WN M+ + + LF
Sbjct: 121 CLSEKLFDFYLFKGDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 79 EKNIVSWNGMVSG----------------------------------------FVKNGMV 98
+N+ G SG + +NG V
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 99 AEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV----SWTVMLGGL 154
ARRVFD + +++ SW +M+ G + EA RLF M ++ +++ +L
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 155 LKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
K +E +L ++ D ++ Y G L A +F M +R+ VT+
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 211 TMVSGYARNRRVDVARKLFEVM------PERNEVSWTAMLMGYTHSGRMREASEFFDAMP 264
T+++G ++ + A +LF+ M P+ N ++ ++++ + G + + A
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQ-LHAYT 415
Query: 265 VKPVVACNEMIMG-----FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
K A N I G + D++ A F + + W+ M+ Y +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
+F +MQ E N + G Q+H++++++ F + YV S LI MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
K G L A I R+ KDVV W +MI GY+Q+ ++AL FR M G+ D++
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM 499
+SAC+ +KEG++I + C + +V L R G++ ++ E+
Sbjct: 596 NAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE- 653
Query: 500 EPDAIVWGSLLGA 512
D I W +L+
Sbjct: 654 AGDNIAWNALVSG 666
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 178/405 (43%), Gaps = 25/405 (6%)
Query: 125 QEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK-DSRVEDARKLFDMMPV----KDVVAVT 179
QE ++ E R P + W +L G LK + +++ RKL + +
Sbjct: 68 QEKRIDSVENRGIR-PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 180 NMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
+ Y +G L A +FDEMP+R + TW M+ A + LF M N
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPV-----------KPVVACNEMIMGFGFDGDVDRAK 288
G + R S FD + V CN +I + +G VD A+
Sbjct: 185 NEGTFSGVLEA--CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
VF+ +R +D +W AMI + E EA+ LF M G
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
+ G Q+H +++ F D YV +AL+++Y G+L+ A+ IF+ +D V +N++I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE-SMKCKYQV 467
G SQ G GE+A+ +F+ M L G+ PD + ++ ACS G + G+++ + K +
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
IE +++L + + A++ + +E + ++W +L A
Sbjct: 423 NNKIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 85/337 (25%)
Query: 12 MVQVRFQCTS---TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPH 68
+++ FQ + + I YA++G+++ A + + SW M+A Y Q +
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 69 QAVTLFETTPEKNIVS---------------------------------------WNGMV 89
+A+T F ++ I S N +V
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 90 SGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTV 149
+ + + G + E+ F+ + ++W ++V G+ Q GN EEA R+F RM + + +
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 150 MLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
G S V+ A + +M K V AV GY E + A
Sbjct: 694 TFG-----SAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNA--------------- 732
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVK 266
++S YA+ + A K F + +NEVSW A++ Y+ G EA + FD M V+
Sbjct: 733 --LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 267 P--------VVACNEMIMGFGFDGDVDRAKAVFEKMR 295
P + AC+ + G VD+ A FE M
Sbjct: 791 PNHVTLVGVLSACSHI-------GLVDKGIAYFESMN 820
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/645 (35%), Positives = 345/645 (53%), Gaps = 31/645 (4%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N +++ + K AR VFD M R+++SW S++ G Q G EA LF ++ +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 146 SWTVMLGGLLKD-SRVEDARKL--------FDMMPVKDVVAVTNMIGGYCEEGRLEEARA 196
+ +LK S + + L + V D T +I Y ++EA
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREA 256
LF E ++V W M++GY ++ KLF +M ++ E S L + +
Sbjct: 474 LF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL------ATVFKT 526
Query: 257 SEFFDAMPVKPVVACNEMIMGFGFD--------------GDVDRAKAVFEKMRERDDGTW 302
F A+ V + G+ D GD+ A+ F+ + DD W
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+ MI G E A +F++M+ G + + GRQ+HA ++
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
D +V ++L+ MY KCG + A +F R + ++ WN+M+ G +QHG G+E L +
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLG 482
F+ M G+ PD ++FIGVLSACS+SG V E + SM Y ++P IEHY+C+ D LG
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 483 RAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 542
RAG V A ++E M ME A ++ +LL ACR + + KL +LEP ++ YVL
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 543 LSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMK 602
LS+MYA+ +W+++++ R +K V K PG+SWIEV+ K H+FV D+ + + +I +
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV-VDDRSNRQTELIYR 885
Query: 603 MLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMK 662
++ + ++ GY P+ F L DVEEEEK +L YHSEKLA+A+GLL P PIRV+K
Sbjct: 886 KVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 945
Query: 663 NLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
NLRVCGDCH+A+K IAKV REI++RDANRFH FKDG CSC DYW
Sbjct: 946 NLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 246/526 (46%), Gaps = 49/526 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL---FETT---P 78
++ Y + G+++ + +F+E P+ R WN M+ AY + +A+ L F ++ P
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPY--RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 79 EKNIVSWNGMVSGFVKN-GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
+ + +SG + G V DA V ++ + Y+ G + F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 138 RMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDM---MPVKDVVAVTN-MIGGYCEEG 189
M E +V V++ +ML +K + +++ M + + ++ V+N +I YC+
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARN----RRVDVARKLFEVMPERNEVSWTAMLM 245
+ AR +FD M +R++++W ++++G A+N V + +L + ++ + T++L
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 246 G--------------YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF 291
+ H+ ++ S+ F +I + + + A+ +F
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSF---------VSTALIDAYSRNRCMKEAEILF 475
Query: 292 EKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
E+ D W+AM+ Y + + L LFA M ++G + +
Sbjct: 476 ER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
G+QVHA ++S +D DL+V+S ++ MYVKCGD+ A++ F+ P+ D V W +MI+G
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMKCKYQVEPG 470
++G E A +VF M L GV PD+ + + A S +++GR+I ++K +P
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+ +VD+ + G ++DA + +++ M + W ++L H
Sbjct: 655 VG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQH 697
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 53/399 (13%)
Query: 68 HQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEG 127
H + FE PE+ ++ N ++S + K G + ARRVFD MP R++VSW S++ Y Q
Sbjct: 62 HARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSS 119
Query: 128 -----NVEEAERLFWRMPEKNVVSWTVMLGGLLK---DSRVEDARKLFDMMPVK-----D 174
N+++A LF + + V + + L +LK S A + F K D
Sbjct: 120 ECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGD 179
Query: 175 VVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA----RNRRVDVARKLFE 230
++ Y + G+++E + LF+EMP R+VV W M+ Y + +D++
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 231 VMPERNEVS--WTAMLMG-YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRA 287
NE++ A + G + +G+++ + DA V ++ N+ + + G
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
F M E D + ++++L L
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLAL-------------------------- 333
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMI 407
G+QVH ++ D L V+++LI MY K A+ +F+ +D++ WNS+I
Sbjct: 334 -----GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
G +Q+GL EA+ +F + G+ PD + VL A S
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+ HAR++ E + + ++ + LI+MY KCG L A+ +F++ P +D+V WNS++ Y+Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 413 HGLG-----EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
++A +FR + V ++ +L C +SG V E F CK +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGL 176
Query: 468 EPGIEHYA-CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
+ G E A +V++ + G+V + + E+MP D ++W +L A ++++ E A+
Sbjct: 177 D-GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA---YLEMGFKEEAI 231
Query: 527 EKLAQLEPKNAGP 539
+ + P
Sbjct: 232 DLSSAFHSSGLNP 244
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 68/289 (23%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
ST I Y+R ++ A +F+ + +WNAM+A Y Q+H H+ + LF ++
Sbjct: 455 STALIDAYSRNRCMKEAEILFERH---NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 81 -------------------------------------NIVSW--NGMVSGFVKNGMVAEA 101
++ W +G++ +VK G ++ A
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
+ FD++PV + V+WT+M+ G ++ G E A +F +M V+ + L K S
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 162 DARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR 221
A E+GR A AL V T++V YA+
Sbjct: 632 TA----------------------LEQGRQIHANALKLNCTNDPFVG-TSLVDMYAKCGS 668
Query: 222 VDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP 267
+D A LF+ + N +W AML+G G +E + F M +KP
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 316/563 (56%), Gaps = 42/563 (7%)
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF------EVMPERNE 237
Y G++ + ALF + ++ +T ++ + N D A L+ E+ P NE
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP--NE 130
Query: 238 VSWTAMLMG-------------------------------YTHSGRMREASEFFDAMPVK 266
+++++L Y G + A + FD MP +
Sbjct: 131 FTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER 190
Query: 267 PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ 326
+V+ MI + G+V+ A+A+F+ M ERD +W+ MI Y + GF +AL LF ++
Sbjct: 191 SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLL 250
Query: 327 REGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
EG + + GR +H + S ++ V + LI MY KCG L
Sbjct: 251 AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 386 VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM-CLSGVPPDDISFIGVLSA 444
A +FN P KD+V WN+MI GY+ HG ++AL +F +M ++G+ P DI+FIG L A
Sbjct: 311 EEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C+++G V EG IFESM +Y ++P IEHY C+V LLGRAGQ+ A E ++ M M+ D++
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK 564
+W S+LG+C+ H L + E L L KN+G YVLLS++YAS G +E V VR +K
Sbjct: 431 LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMK 490
Query: 565 TRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVL 624
+ ++K PG S IE+E K H F GD H + I ML ++ ++ GY P+ + VL
Sbjct: 491 EKGIVKEPGISTIEIENKVHEFRAGDRE-HSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 625 HDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684
D+EE EK SL HSE+LAIAYGL+ G P+++ KNLRVC DCH+ KLI+K+TGR+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609
Query: 685 IIVRDANRFHHFKDGYCSCKDYW 707
I++RD NRFHHF DG CSC D+W
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
+V Y + A +F+ PE+++VS M++ + K G V AR +FD+M R++V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRM-----PEKNVVSWTVMLGGLLKDSRVEDARKLFDM 169
SW M+ GY Q G +A LF ++ P+ + ++ L + +E R +
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 170 MPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVA 225
+ +V T +I Y + G LEEA +F++ P++++V W M++GYA + A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 226 RKLFEVMP-----ERNEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVV---ACNE 273
+LF M + ++++ L H+G + E F++M +KP + C
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC-- 402
Query: 274 MIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
++ G G + RA + M + D WS+++
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 18/318 (5%)
Query: 28 YARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSW 85
YA G+I ++ +F +T P + T++ N + V L + N ++
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 86 NGMV-SGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV 144
+ ++ S K+G + + + + V+ T +V Y + G+V A+++F RMPE+++
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVA-TGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 145 VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM--- 201
VS T M+ K VE AR LFD M +D+V+ MI GY + G +A LF ++
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 202 --PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMRE 255
PK + +T +S ++ ++ R + + N T ++ Y+ G + E
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 256 ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-----ERDDGTWSAMIKVYE 310
A F+ P K +VA N MI G+ G A +F +M+ + D T+ ++
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 311 RKGFELEALGLFARMQRE 328
G E + +F M +E
Sbjct: 373 HAGLVNEGIRIFESMGQE 390
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 RFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF- 74
R +ST I+ YA+ G +E AR +FD R SWN M+ Y Q P+ A+ LF
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSM--CERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 75 ----ETTPEKNIVSWNGMVSGFVKNGMVAEAR--RVF-DAMPVR-NVVSWTSMVRGYVQE 126
E P+ + ++ +S + G + R VF + +R NV T ++ Y +
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 127 GNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM 170
G++EEA +F P K++V+W M+ G +DA +LF+ M
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 18 QCTSTGAISRYARIGQIENAR--KVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE 75
+ T A+S ++IG +E R VF ++ I ++ Y + +AV +F
Sbjct: 259 EITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 76 TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM-------PVRNVVSWTSMVRGYVQEGN 128
TP K+IV+WN M++G+ +G +A R+F+ M P +++ ++ G
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD--ITFIGTLQACAHAGL 376
Query: 129 VEEAERLFWRMPEK 142
V E R+F M ++
Sbjct: 377 VNEGIRIFESMGQE 390
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 324/540 (60%), Gaps = 18/540 (3%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNE 237
V +I Y + L +A LFD+MP+RNV++WTTM+S Y++ + A +L +M R+
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML-RDN 157
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPV----------KPVVACNEMIMGFGFDGDVDRA 287
V YT+S +R + D + V + +I F G+ + A
Sbjct: 158 VRPNV----YTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
+VF++M D W+++I + + AL LF RM+R G
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMI 407
+ G Q H +V+ +DQDL + +AL+ MY KCG L A +FN+ +DV+ W++MI
Sbjct: 274 ALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
+G +Q+G +EAL +F M SG P+ I+ +GVL ACS++G +++G F SMK Y +
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
+P EHY CM+DLLG+AG+++DAV+++ +M EPDA+ W +LLGACR + LAE A +
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 528 KLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFV 587
K+ L+P++AG Y LLS++YA+ +W+ VE +R +++ R + K PG SWIEV K+ H F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 588 GGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAY 647
GDN+ HP+ + K L +L L GY P+ +FVL D+E E+ SL +HSEKLA+A+
Sbjct: 512 IGDNS-HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 648 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
GL+ +P IR+ KNLR+CGDCH KL +K+ R I++RD R+HHF+DG CSC DYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 24/285 (8%)
Query: 61 YFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMV 120
YF H+P + N +++ +VK ++ +A ++FD MP RNV+SWT+M+
Sbjct: 88 YFNGHRPMMFLV-------------NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 121 RGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DV 175
Y + ++A L M NV +L+ ++ +K DV
Sbjct: 135 SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDV 194
Query: 176 VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER 235
+ +I + + G E+A ++FDEM + + W +++ G+A+N R DVA +LF+ M
Sbjct: 195 FVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA 254
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPV------KPVVACNEMIMGFGFDGDVDRAKA 289
++ A L + E V + ++ N ++ + G ++ A
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 290 VFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
VF +M+ERD TWS MI + G+ EAL LF RM+ G N+
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 58/336 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-- 82
I+ Y + + +A ++FD+ P R SW M++AY + +A+ L N+
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 83 ---------VSWNGM-------------------------VSGFVKNGMVAEARRVFDAM 108
S NGM + F K G +A VFD M
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFD 168
+ + W S++ G+ Q + A LF RM ++ L +L+ +L
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 169 MMPV------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
V +D++ ++ YC+ G LE+A +F++M +R+V+TW+TM+SG A+N
Sbjct: 281 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 223 DVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM-------PVKPVVAC 271
A KLFE M N ++ +L +H+G + + +F +M PV+ C
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC 400
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
MI G G +D A + +M E D TW ++
Sbjct: 401 --MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 369 LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
+++ + LI MYVK L A +F++ P ++V+ W +MI+ YS+ + ++AL + M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 429 SGVPPDDISFIGVLSACS--------YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
V P+ ++ VL +C+ + G +KEG +E + + ++D+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDV 203
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+ G+ DA+ + ++M + DAIVW S++G + + D+A
Sbjct: 204 FAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/678 (35%), Positives = 355/678 (52%), Gaps = 52/678 (7%)
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
K++ N +V + + G + AR+VFD M RNVVSWTSM+ GY + ++A LF+RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 140 PEK-----NVVSWTVMLGGLLKDSRVEDARKLFDMM-----PVKDVVAVTNMIGGYCEEG 189
N V+ ++ K +E K++ + V D++ V+ ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM-VSALVDMYMKCN 285
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PERNEV----- 238
++ A+ LFDE N+ M S Y R A +F +M P+R +
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 239 ------------------------SW----TAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
SW A++ Y R A FD M K VV
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-REG 329
N ++ G+ +G+VD A FE M E++ +W+ +I + EA+ +F MQ +EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D + ++ + ++ D+ + + L+ M+ +CGD A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
IFN +DV W + I + G E A+ +F DM G+ PD ++F+G L+ACS+ G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
V++G+EIF SM + V P HY CMVDLLGRAG + +AV+++E MPMEP+ ++W SL
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L ACR +++A A EK+ L P+ G YVLLS++YAS GRW D+ VR +K + +
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE 629
K PG S I++ K H F GD + HPE P I ML+ + G+ PD S VL DV+E
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDES-HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 689
+EK L HSEKLA+AYGL+ +G IR++KNLRVC DCHS K +KV REII+RD
Sbjct: 765 KEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRD 824
Query: 690 ANRFHHFKDGYCSCKDYW 707
NRFH+ + G CSC D+W
Sbjct: 825 NNRFHYIRQGKCSCGDFW 842
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 182/431 (42%), Gaps = 50/431 (11%)
Query: 116 WTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSW--TVMLGGLLKDSRVEDARKLF 167
+ S++RGY G EA LF RM P+K + + K + ++ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
M KD+ +++ Y E G L+ AR +FDEM +RNVV+WT+M+ GYAR A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMR----EASEFFDAMPVKPVVACNEMIMGFGFD-- 281
LF M EV+ ++ M S + E E A + N++++ D
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 282 ---GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
+D AK +F++ + +AM Y R+G EALG+F M G +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
G+ H ++R+ F+ + +ALI MY+KC A IF+R K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 399 DVVMWNSMITGYSQHG-------------------------------LGEEALNVFRDM- 426
VV WNS++ GY ++G L EEA+ VF M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
GV D ++ + + SAC + G + + I+ ++ K ++ + +VD+ R G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGD 520
Query: 487 VNDAVEIVEKM 497
A+ I +
Sbjct: 521 PESAMSIFNSL 531
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 28/313 (8%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
I Y + + + A ++FD + +T +WN++VA Y + + A FET PEKNIVS
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEAERLFWRM 139
WN ++SG V+ + EA VF +M + + V+ S+ G ++ A+ +++ +
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 140 PEKNVVSWTVMLGGLLKD--SRV---EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
EKN + V LG L D SR E A +F+ + +DV A T IG G E A
Sbjct: 497 -EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 195 RALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----WTAMLM 245
LFD+M ++ + V + ++ + V +++F M + + VS + M+
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 246 GYTHSGRMREASEFFDAMPVKPV-VACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDG 300
+G + EA + + MP++P V N ++ G+V+ A EK++ ER G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER-TG 674
Query: 301 TWSAMIKVYERKG 313
++ + VY G
Sbjct: 675 SYVLLSNVYASAG 687
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 287 AKAVFEKMRERDDGT---WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
AK VFE GT ++++I+ Y G EA+ LF RM G + +
Sbjct: 86 AKEVFENSESY--GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
+G Q+H +V+ + +DL+V ++L+ Y +CG+L A+ +F+ ++VV W
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
SMI GY++ ++A+++F M V P+ ++ + V+SAC+ ++ G +++ ++
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
GIE MV L +A+++ +++
Sbjct: 264 -----NSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/544 (39%), Positives = 309/544 (56%), Gaps = 40/544 (7%)
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDA 262
+V T+++S Y+ + R++ A KLF+ +P+R+ V+WTA+ GYT SGR REA + F
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 263 M---PVKP--------VVAC----------------------------NEMIMGFGFDGD 283
M VKP + AC ++ + G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
+++A++VF+ M E+D TWS MI+ Y F E + LF +M +E +
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
D G + + R EF +L++A+ALI MY KCG + R +F KD+V+
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
N+ I+G +++G + + VF G+ PD +F+G+L C ++G +++G F ++ C
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 464 KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAE 523
Y ++ +EHY CMVDL GRAG ++DA ++ MPM P+AIVWG+LL CR LAE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 524 VAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKA 583
+++L LEP NAG YV LS++Y+ GRW++ VR+ + + + K+PGYSWIE+E K
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 584 HMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKL 643
H F+ D+ HP I LE L +R G+ P FV DVEEEEK LGYHSEKL
Sbjct: 563 HEFL-ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 644 AIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSC 703
A+A GL+ G IRV+KNLRVCGDCH +KLI+K+T REI+VRD NRFH F +G CSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 704 KDYW 707
DYW
Sbjct: 682 NDYW 685
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 30/274 (10%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP 140
++ + ++S + +G + +A ++FD +P R+VV+WT++ GY G EA LF +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 141 EK----------NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGR 190
E V+S V +G L DS + + +M K+ T ++ Y + G+
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDL--DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHS 250
+E+AR++FD M ++++VTW+TM+ GYA N +LF M + N ++G+ S
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 251 G-------------RMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+ + EF + + N +I + G + R VF++M+E+
Sbjct: 323 CASLGALDLGEWGISLIDRHEF-----LTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
D +A I + G + +F + ++ G +
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 129/296 (43%), Gaps = 57/296 (19%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
T +S Y+ G++ +A K+FDE P R+ +W A+ + Y + + +A+ LF
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPD--RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 75 --------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
E +KN +V+ + K G + +AR
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
VFD+M +++V+W++M++GY +E LF +M ++N+ + G L
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 163 ARKL----FDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
A L ++ + ++ +I Y + G + +F EM ++++V +S
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 215 GYARNRRVDVARKLF------EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP 264
G A+N V ++ +F + P+ + ++ +L G H+G +++ FF+A+
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGS--TFLGLLCGCVHAGLIQDGLRFFNAIS 441
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 21/270 (7%)
Query: 52 SSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR 111
++ ++++ Y + + + A LF+ P++++V+W + SG+ +G EA +F M
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 112 NV----VSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDA 163
V ++ V G+++ E + M E KN T ++ K ++E A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 164 RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVD 223
R +FD M KD+V + MI GY +E LF +M + N+ + G+ +
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 224 VARKLFE---VMPERNEVSWTAMLMG------YTHSGRMREASEFFDAMPVKPVVACNEM 274
A L E + +R+E T + M Y G M E F M K +V N
Sbjct: 327 GALDLGEWGISLIDRHEF-LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 275 IMGFGFDGDVDRAKAVF---EKMRERDDGT 301
I G +G V + AVF EK+ DG+
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 342/623 (54%), Gaps = 45/623 (7%)
Query: 129 VEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGG 184
+ EA +L R + ++ ++ + +E+ +K+ + + V +V ++
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 185 YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAML 244
Y + G L +AR +FDEMP R++ +W MV+GYA ++ ARKLF+ M E++ SWTAM+
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 245 MGYTHSGRMREASEFFDAMPVKPVVACNEM------------------------IMGFGF 280
GY + EA + M P N I+ G
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 281 DGD----------------VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
D D +D A+ +F+K+ E+D +W++MI Y + E LF+
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
+ N + G+QVH + R FD + +S+L+ MY KCG+
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
+ AK + + P D+V W S+I G +Q+G +EAL F + SG PD ++F+ VLSA
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C+++G V++G E F S+ K+++ +HY C+VDLL R+G+ ++ +MPM+P
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF 489
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK 564
+W S+LG C T+ +DLAE A ++L ++EP+N YV ++++YA+ G+WE+ +R++++
Sbjct: 490 LWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Query: 565 TRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVL 624
V K PG SW E+++K H+F+ D + HP I++ L L +++ GY P S VL
Sbjct: 550 EIGVTKRPGSSWTEIKRKRHVFIAADTS-HPMYNQIVEFLRELRKKMKEEGYVPATSLVL 608
Query: 625 HDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684
HDVE+E+K +L YHSEKLA+A+ +L EG I+V KNLR C DCH AIK I+ +T R+
Sbjct: 609 HDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRK 668
Query: 685 IIVRDANRFHHFKDGYCSCKDYW 707
I VRD+ RFH F++G CSC DYW
Sbjct: 669 ITVRDSTRFHCFENGQCSCGDYW 691
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 188/427 (44%), Gaps = 61/427 (14%)
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
IV WN ++ + K G + +AR+VFD MP R++ SW MV GY + G +EEA +LF M E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMM-----PVKDVVAVTNMIGGYCEEGRLEEARA 196
K+ SWT M+ G +K + E+A L+ +M ++ V+ + + +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 197 LFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
+ + + + V W++++ Y + +D AR +F+ + E++ VSWT+M+ Y S R
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 253 MREASEFFDAM---PVKP--------VVACNEM--------IMGF----GFD-------- 281
RE F + +P + AC ++ + G+ GFD
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 282 --------GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
G+++ AK V + + D +W+++I + G EAL F + + G +
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLV---RSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ G + + R D Y + L+ + + G + K
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY--TCLVDLLARSGRFEQLKS 477
Query: 391 IFNRYPLK-DVVMWNSMITGYSQHG---LGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
+ + P+K +W S++ G S +G L EEA + P + ++++ + + +
Sbjct: 478 VISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI----EPENPVTYVTMANIYA 533
Query: 447 YSGKVKE 453
+GK +E
Sbjct: 534 AAGKWEE 540
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 54/300 (18%)
Query: 19 CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF---- 74
C+ ++ YA +G +E ARK+FDE + + SW AMV Y + QP +A+ L+
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEM--TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 75 ---ETTPEKNIVS---------------------------------WNGMVSGFVKNGMV 98
+ P VS W+ ++ + K G +
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 99 AEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGL 154
EAR +FD + ++VVSWTSM+ Y + E LF + N ++ +L
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Query: 155 LKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
+ E +++ M A ++++ Y + G +E A+ + D PK ++V+WT
Sbjct: 330 ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWT 389
Query: 211 TMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
+++ G A+N + D A K F+++ + + V++ +L TH+G + + EFF ++ K
Sbjct: 390 SLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEK 449
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 338/610 (55%), Gaps = 59/610 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+++ R G I AR +F++ R T +WN M++ Y + + +QA LF+ P++++V+
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEA--RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVT 104
Query: 85 WNGMVSGFVKNG---MVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
WN M+SG+V G + EAR++FD MP R+ SW +M+ GY + + EA LF +MPE
Sbjct: 105 WNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE 164
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD--------------------------- 174
+N VSW+ M+ G ++ V+ A LF MPVKD
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 175 ----------VVAVTNMIGGYCEEGRLEEARALFDEMPK---------------RNVVTW 209
V A +I GY + G++E AR LFD++P +NVV+W
Sbjct: 225 GSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
+M+ Y + V AR LF+ M +R+ +SW M+ GY H RM +A F MP +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+ N M+ G+ G+V+ A+ FEK E+ +W+++I YE+ EA+ LF RM EG
Sbjct: 345 SWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ G Q+H +V++ D+ V +ALITMY +CG+++ ++
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESR 463
Query: 390 WIFNRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
IF+ LK +V+ WN+MI GY+ HG EALN+F M +G+ P I+F+ VL+AC+++
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHA 523
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G V E + F SM Y++EP +EHY+ +V++ GQ +A+ I+ MP EPD VWG+
Sbjct: 524 GLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGA 583
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LL ACR + + LA VA E +++LEP+++ PYVLL +MYA G W++ VR ++++ +
Sbjct: 584 LLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRI 643
Query: 569 IKLPGYSWIE 578
K G SW++
Sbjct: 644 KKERGSSWVD 653
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 337/599 (56%), Gaps = 50/599 (8%)
Query: 126 EGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGY 185
EG+ A+R F+ K + +++ G R+ A L + D+V ++ Y
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQG-----RIVHAHILQSIFR-HDIVMGNTLLNMY 105
Query: 186 CEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLM 245
+ G LEEAR +F++MP+R+ VTWTT++SGY+++ R A F M +
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM----------LRF 155
Query: 246 GYTHSGRMREASEFFDAMPVKPVVA-----CNEMIMGF----GFDGDV------------ 284
GY+ +EF + +K A C + GF GFD +V
Sbjct: 156 GYS-------PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 285 ----DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
D A+ VF+ + R+D +W+A+I + R+ +AL LF M R+G +
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
+ G+ VHA +++S + + L+ MY K G + A+ IF+R +DV
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
V WNS++T Y+QHG G+EA+ F +M G+ P++ISF+ VL+ACS+SG + EG +E
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD 520
MK K + P HY +VDLLGRAG +N A+ +E+MP+EP A +W +LL ACR H +
Sbjct: 389 MK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 521 LAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVE 580
L A E + +L+P + GP+V+L ++YAS GRW D VR+K+K V K P SW+E+E
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 581 KKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHS 640
HMFV D HP++ I + E + +++ GY PD S V+ V+++E+ +L YHS
Sbjct: 508 NAIHMFVANDER-HPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHS 566
Query: 641 EKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDG 699
EK+A+A+ LL P G I + KN+RVCGDCH+AIKL +KV GREIIVRD NRFHHFKD
Sbjct: 567 EKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 164/384 (42%), Gaps = 27/384 (7%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
+ ++ +IV N +++ + K G + EAR+VF+ MP R+ V+WT+++ GY Q +A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVED------------ARKLFDMMPVKDVVAVTN 180
F +M L ++K + E + FD +V +
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD----SNVHVGSA 201
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPE---RNE 237
++ Y G +++A+ +FD + RN V+W +++G+AR + A +LF+ M R
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFE 292
A L G S E ++ A +K A N ++ + G + A+ +F+
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 293 KMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH 352
++ +RD +W++++ Y + GF EA+ F M+R G N D
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYS 411
G + + + + + ++ + + GDL RA P++ +W +++
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 412 QHGLGEEALNVFRDMCLSGVPPDD 435
H E L + + + PDD
Sbjct: 442 MHKNTE--LGAYAAEHVFELDPDD 463
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 60/339 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET------TP 78
++ YA+ G +E ARKVF++ P R +W +++ Y Q +P A+ F +P
Sbjct: 102 LNMYAKCGSLEEARKVFEKMP--QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP 159
Query: 79 ---------------------------------EKNIVSWNGMVSGFVKNGMVAEARRVF 105
+ N+ + ++ + + G++ +A+ VF
Sbjct: 160 NEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVF 219
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVE 161
DA+ RN VSW +++ G+ + E+A LF M S+ + G +E
Sbjct: 220 DALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 162 DARKLFDMMPVKD-----VVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
+ + M +K A ++ Y + G + +AR +FD + KR+VV+W ++++ Y
Sbjct: 280 QGKWVHAYM-IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 217 ARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA-- 270
A++ A FE M NE+S+ ++L +HSG + E +++ M +V
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 271 --CNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
++ G GD++RA E+M E W A++
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/739 (30%), Positives = 372/739 (50%), Gaps = 59/739 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE--------- 75
IS +G ++ A +FD+ R T SWN++ AAY Q ++ +F
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 76 -TTPEKNIVS---------WNGMVSGFVKN--------------------GMVAEARRVF 105
+T ++S W + G V G EA VF
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVE 161
MP ++++SW S++ +V +G +A L M N V++T L E
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 162 DARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
R L ++ V + + ++ Y + G + E+R + +MP+R+VV W ++ GYA
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 218 RNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
+ D A F+ M N ++ ++L G + E + A V +E
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 274 -----MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+I + GD+ ++ +F + R+ TW+AM+ G E L L ++M+
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 559
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G +L+ + G+Q+H V+ F+ D ++ +A MY KCG++
Sbjct: 560 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+ + + WN +I+ +HG EE F +M G+ P ++F+ +L+ACS+
Sbjct: 620 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G V +G ++ + + +EP IEH C++DLLGR+G++ +A + KMPM+P+ +VW S
Sbjct: 680 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 739
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LL +C+ H LD A E L++LEP++ YVL S+M+A+ GRWEDVE VR+++ +++
Sbjct: 740 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 799
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE 628
K SW++++ K F GD HP+ I LE + L++++GY D S L D +
Sbjct: 800 KKKQACSWVKLKDKVSSFGIGDRT-HPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTD 858
Query: 629 EEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVR 688
EE+K H+L HSE+LA+AY L+ PEG +R+ KNLR+C DCHS K +++V GR I++R
Sbjct: 859 EEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLR 918
Query: 689 DANRFHHFKDGYCSCKDYW 707
D RFHHF+ G CSCKDYW
Sbjct: 919 DQYRFHHFERGLCSCKDYW 937
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 241/559 (43%), Gaps = 74/559 (13%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----- 75
ST + Y G + +RKVF+E P R SW +++ Y +P + + +++
Sbjct: 97 STAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 154
Query: 76 ----------------------------------TTPEKNIVSWNGMVSGFVKNGMVAEA 101
+ E + N ++S G V A
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKD 157
+FD M R+ +SW S+ Y Q G++EE+ R+F M E N + + +L L
Sbjct: 215 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Query: 158 SRVEDARKLFDM---MPVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ R + + M VV V N ++ Y GR EA +F +MP +++++W +++
Sbjct: 275 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 334
Query: 214 SGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG-----YTHSGRMREASEFFDAMP 264
+ + + R A L M N V++T+ L + GR+ +
Sbjct: 335 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 394
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
++ N ++ +G G++ ++ V +M RD W+A+I Y +AL F
Sbjct: 395 YNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 325 MQREGAALNF-PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
M+ EG + N+ + G+ +HA +V + F+ D +V ++LITMY KCG
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
DL ++ +FN ++++ WN+M+ + HG GEE L + M GV D SF LS
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEH----YACMVDLLGRAGQVNDAVEIVEKMPM 499
A + ++EG+++ V+ G EH + D+ + G++ E+V+ +P
Sbjct: 574 AAAKLAVLEEGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPP 625
Query: 500 EPDAIV--WGSLLGACRTH 516
+ + W L+ A H
Sbjct: 626 SVNRSLPSWNILISALGRH 644
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/551 (24%), Positives = 251/551 (45%), Gaps = 71/551 (12%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAM------VAAYFQAHQPHQAVTLFETTPEK- 80
Y + G+++ AR +FD P R SWN M V Y + + + + P
Sbjct: 2 YTKFGRVKPARHLFDIMPV--RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 81 ---NIVSWNG----------MVSGFVKN--------------------GMVAEARRVFDA 107
++V+ G V GFV G+V+ +R+VF+
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 108 MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP------EKNVVSWTVMLGGLLKDSRVE 161
MP RNVVSWTS++ GY +G EE ++ M +N +S + GLLKD +
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL- 178
Query: 162 DARKLFDMM---PVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
R++ + ++ +AV N +I G ++ A +FD+M +R+ ++W ++ + YA
Sbjct: 179 -GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 218 RNRRVDVARKLFEVM----PERNEVSWTAML--MGYT-HSGRMREASEFFDAMPVKPVVA 270
+N ++ + ++F +M E N + + +L +G+ H R M VV
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 271 -CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
CN ++ + G A VF++M +D +W++++ + G L+ALGL M G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
++N+ + GR +H +V S + + +AL++MY K G++ ++
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+ + P +DVV WN++I GY++ ++AL F+ M + GV + I+ + VLSAC G
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 450 KVKEGREIFESMKCKYQVEPGIEH----YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
+ E + + Y V G E ++ + + G ++ + ++ + + I
Sbjct: 478 DLLERGKPLHA----YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIIT 532
Query: 506 WGSLLGACRTH 516
W ++L A H
Sbjct: 533 WNAMLAANAHH 543
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 139/348 (39%), Gaps = 62/348 (17%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
Q +S Y +IG++ +R+V + P R +WNA++ Y + P +A+ F+T
Sbjct: 397 QIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Query: 78 PEKNIVS----------------------------------------WNGMVSGFVKNGM 97
+ + S N +++ + K G
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGG 153
++ ++ +F+ + RN+++W +M+ G+ EE +L +M V S++ L
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 154 LLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
K + +E+ ++L + VK D Y + G + E + R++ +
Sbjct: 575 AAKLAVLEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 209 WTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP 264
W ++S R+ + F M E V++ ++L +H G + + ++D +
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 265 ----VKPVVA-CNEMIMGFGFDGDVDRAKAVFEKMRER-DDGTWSAMI 306
++P + C +I G G + A+ KM + +D W +++
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 741
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 378 MYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
MY K G + A+ +F+ P+++ V WN+M++G + GL E + FR MC G+ P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 438 FIGVLSACSYSGKV-KEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
+++AC SG + +EG ++ K + + ++ L G G V+ + ++ E+
Sbjct: 61 IASLVTACGRSGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 497 MPMEPDAIVWGSLL 510
MP + + + W SL+
Sbjct: 120 MP-DRNVVSWTSLM 132
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/677 (35%), Positives = 354/677 (52%), Gaps = 52/677 (7%)
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
K++ N +V + + G + AR+VFD M RNVVSWTSM+ GY + ++A LF+RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 140 PEK-----NVVSWTVMLGGLLKDSRVEDARKLFDMM-----PVKDVVAVTNMIGGYCEEG 189
N V+ ++ K +E K++ + V D++ V+ ++ Y +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM-VSALVDMYMKCN 285
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PERNEV----- 238
++ A+ LFDE N+ M S Y R A +F +M P+R +
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 239 ------------------------SW----TAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
SW A++ Y R A FD M K VV
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-REG 329
N ++ G+ +G+VD A FE M E++ +W+ +I + EA+ +F MQ +EG
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D + ++ + ++ D+ + + L+ M+ +CGD A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
IFN +DV W + I + G E A+ +F DM G+ PD ++F+G L+ACS+ G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
V++G+EIF SM + V P HY CMVDLLGRAG + +AV+++E MPMEP+ ++W SL
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L ACR +++A A EK+ L P+ G YVLLS++YAS GRW D+ VR +K + +
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE 629
K PG S I++ K H F GD + HPE P I ML+ + G+ PD S VL DV+E
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDES-HPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 689
+EK L HSEKLA+AYGL+ +G IR++KNLRVC DCHS K +KV REII+RD
Sbjct: 765 KEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRD 824
Query: 690 ANRFHHFKDGYCSCKDY 706
NRFH+ + G CSC D+
Sbjct: 825 NNRFHYIRQGKCSCGDF 841
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 182/431 (42%), Gaps = 50/431 (11%)
Query: 116 WTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSW--TVMLGGLLKDSRVEDARKLF 167
+ S++RGY G EA LF RM P+K + + K + ++ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
M KD+ +++ Y E G L+ AR +FDEM +RNVV+WT+M+ GYAR A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMR----EASEFFDAMPVKPVVACNEMIMGFGFD-- 281
LF M EV+ ++ M S + E E A + N++++ D
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 282 ---GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
+D AK +F++ + +AM Y R+G EALG+F M G +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
G+ H ++R+ F+ + +ALI MY+KC A IF+R K
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 399 DVVMWNSMITGYSQHG-------------------------------LGEEALNVFRDM- 426
VV WNS++ GY ++G L EEA+ VF M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
GV D ++ + + SAC + G + + I+ ++ K ++ + +VD+ R G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGD 520
Query: 487 VNDAVEIVEKM 497
A+ I +
Sbjct: 521 PESAMSIFNSL 531
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 32/315 (10%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
I Y + + + A ++FD + +T +WN++VA Y + + A FET PEKNIVS
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEAERLFWRM 139
WN ++SG V+ + EA VF +M + + V+ S+ G ++ A+ +++ +
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 140 PEKNVVSWTVMLGGLLKD--SRV---EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
EKN + V LG L D SR E A +F+ + +DV A T IG G E A
Sbjct: 497 -EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 195 RALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVM-------PERNEVSWTAM 243
LFD+M ++ + V + ++ + V +++F M PE +V + M
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE--DVHYGCM 613
Query: 244 LMGYTHSGRMREASEFFDAMPVKPV-VACNEMIMGFGFDGDVDRAKAVFEKMR----ERD 298
+ +G + EA + + MP++P V N ++ G+V+ A EK++ ER
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER- 672
Query: 299 DGTWSAMIKVYERKG 313
G++ + VY G
Sbjct: 673 TGSYVLLSNVYASAG 687
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 287 AKAVFEKMRERDDGT---WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
AK VFE GT ++++I+ Y G EA+ LF RM G + +
Sbjct: 86 AKEVFENSESY--GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
+G Q+H +V+ + +DL+V ++L+ Y +CG+L A+ +F+ ++VV W
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
SMI GY++ ++A+++F M V P+ ++ + V+SAC+ ++ G +++ ++
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
GIE MV L +A+++ +++
Sbjct: 264 -----NSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 323/564 (57%), Gaps = 17/564 (3%)
Query: 159 RVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMVS 214
R+ AR +FD M +DVV MI YC G ++EA LF+EM NV+ +VS
Sbjct: 161 RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 215 GYARNRRVDVARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
R + R ++E + E N+V TA++ Y +G M A EFF M V+ +
Sbjct: 221 ACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
M+ G+ G +D A+ +F++ ++D W+ MI Y + EAL +F M G
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D + VH+ + + + +L + +ALI MY KCG L +
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F + P ++VV W+SMI S HG +AL++F M V P++++F+GVL CS+SG
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
V+EG++IF SM +Y + P +EHY CMVDL GRA + +A+E++E MP+ + ++WGSL
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
+ ACR H +L+L + A +++ +LEP + G VL+S++YA + RWEDV +R ++ ++V
Sbjct: 520 MSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVF 579
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE 629
K G S I+ K+H F+ GD H + I L+ + L+ AGY PD VL DVEE
Sbjct: 580 KEKGLSRIDQNGKSHEFLIGDKR-HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPEGMP------IRVMKNLRVCGDCHSAIKLIAKVTGR 683
EEK + +HSEKLA+ +GL+ + IR++KNLRVC DCH KL++KV R
Sbjct: 639 EEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYER 698
Query: 684 EIIVRDANRFHHFKDGYCSCKDYW 707
EIIVRD RFH +K+G CSC+DYW
Sbjct: 699 EIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 153/360 (42%), Gaps = 58/360 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG + YA G+I AR VFDE H R +WN M+ Y + +A LFE + N
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSH--RDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 82 IVS----WNGMVSGFVKNGMVAEARRVFDAMPVRNVVS----WTSMVRGYVQEGNVEEAE 133
++ +VS + G + R +++ + +V T++V Y G ++ A
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
F +M +N+ T M+ G K R++DA+ +FD KD+V T MI Y E +E
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 194 ARALFDEMP----KRNVVTWTTMVSG---------------------------------- 215
A +F+EM K +VV+ +++S
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 216 -YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VA 270
YA+ +D R +FE MP RN VSW++M+ + G +A F M + V V
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGT-----WSAMIKVYERKGFELEALGLFARM 325
++ G G V+ K +F M + + T + M+ ++ R EAL + M
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G ++H + D +V + + MY CG + A+ +F+ +DVV WN+MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
GL +EA +F +M S V PD++ ++SAC +G ++ R I+E + + V
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL-IENDVRMDTH 248
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
+V + AG ++ A E KM + + V +++ +LD A+V ++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 338/568 (59%), Gaps = 13/568 (2%)
Query: 69 QAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR-NVVSWTSMVRGYVQEG 127
+A LF+ PE+++V+W +++G++K G + EAR +FD + R NVV+WT+MV GY++
Sbjct: 64 EARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSK 123
Query: 128 NVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCE 187
+ AE LF MPE+NVVSW M+ G + R++ A +LFD MP +++V+ +M+ +
Sbjct: 124 QLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQ 183
Query: 188 EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGY 247
GR++EA LF+ MP+R+VV+WT MV G A+N +VD AR+LF+ MPERN +SW AM+ GY
Sbjct: 184 RGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGY 243
Query: 248 THSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
+ R+ EA + F MP + + N MI GF + ++++A +F++M E++ +W+ MI
Sbjct: 244 AQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMIT 303
Query: 308 VYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
Y EAL +F++M R+G+ N G+Q+H + +S
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPL--KDVVMWNSMITGYSQHGLGEEALNVFR 424
++ V SAL+ MY K G+L+ A+ +F+ + +D++ WNSMI Y+ HG G+EA+ ++
Sbjct: 364 KNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
Query: 425 DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M G P ++++ +L ACS++G V++G E F+ + + EHY C+VDL GRA
Sbjct: 424 QMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRA 483
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLS 544
G++ D + +G++L AC H ++ +A+ V+K+ + +AG YVL+S
Sbjct: 484 GRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMS 543
Query: 545 HMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKML 604
++YA+ G+ E+ +R K+K + + K PG SW++V K+ H+FV GD + HP+
Sbjct: 544 NIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKS-HPQ-------F 595
Query: 605 ERLDGLLRDA-GYSPDHSFVLHDVEEEE 631
E LD +L D + V D EE E
Sbjct: 596 EALDSILSDLRNKMRKNKNVTSDAEEAE 623
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 255/499 (51%), Gaps = 53/499 (10%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T T I+ Y ++G + AR++FD + +W AMV+ Y ++ Q A LF+ PE
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDS-RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+N+VSWN M+ G+ ++G + +A +FD MP RN+VSW SMV+ VQ G ++EA LF RM
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
P ++VVSWT M+ GL K+ +V++AR+LFD MP +++++ MI GY + R++EA LF
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEF 259
MP+R+ +W TM++G+ RNR ++ A LF+ MPE+N +SWT M+ GY + EA
Sbjct: 258 VMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNV 317
Query: 260 FDAM----PVKPVV--------AC-----------------------NEMIMG-----FG 279
F M VKP V AC NE++ +
Sbjct: 318 FSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYS 377
Query: 280 FDGDVDRAKAVFEK--MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXX 337
G++ A+ +F+ + +RD +W++MI VY G EA+ ++ +M++ G +
Sbjct: 378 KSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 338 XXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK-CGDLVRAKWIFNRYP 396
+ G + LVR D+ L + T V CG R K + N
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDLVR---DESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 397 LKDVVM----WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
D + + ++++ + H A V + + +G D +++ + + + +GK +
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKRE 553
Query: 453 EGREIFESMKCK-YQVEPG 470
E E+ MK K + +PG
Sbjct: 554 EAAEMRMKMKEKGLKKQPG 572
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 43/370 (11%)
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVTWTT----------------------------- 211
+IG C+ G++ EAR LFD +P+R+VVTWT
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 212 ---MVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
MVSGY R++++ +A LF+ MPERN VSW M+ GY SGR+ +A E FD MP + +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
V+ N M+ G +D A +FE+M RD +W+AM+ + G EA LF M E
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP-E 230
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
+++ D QV ++D + +IT +++ ++ +A
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMP-------ERDFASWNTMITGFIRNREMNKA 283
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSY 447
+F+R P K+V+ W +MITGY ++ EEALNVF M G V P+ +++ +LSACS
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK-MPMEPDAIVW 506
+ EG++I + + + I A ++++ ++G++ A ++ + + + D I W
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSA-LLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 507 GSLLGACRTH 516
S++ H
Sbjct: 403 NSMIAVYAHH 412
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/620 (35%), Positives = 338/620 (54%), Gaps = 47/620 (7%)
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM-PVKDVVAVTNMIGGYCEEGRLE 192
R F P V+ + + L + R+++A M+ P ++ ++ L
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALR 69
Query: 193 EARALFDEMPKRNVVTWTTMVSG----YARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
+ + + M K + T + + Y + ++ ARK+ + MPE+N VSWTAM+ Y+
Sbjct: 70 DGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 249 HSGRMREASEFFDAM---PVKP--------VVAC------------NEMIMGFGFD---- 281
+G EA F M KP + +C + +I+ + +D
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 282 ------------GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
G + A+ +FE + ERD + +A+I Y + G + EAL +F R+ EG
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ N+ DHG+Q H ++R E + ++LI MY KCG+L A+
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYS 448
+F+ P + + WN+M+ GYS+HGLG E L +FR M V PD ++ + VLS CS+
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHG 369
Query: 449 GKVKEGREIFESMKC-KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWG 507
G IF+ M +Y +PG EHY C+VD+LGRAG++++A E +++MP +P A V G
Sbjct: 370 RMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 429
Query: 508 SLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
SLLGACR H+ +D+ E +L ++EP+NAG YV+LS++YAS GRW DV VR + ++
Sbjct: 430 SLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKA 489
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDV 627
V K PG SWI+ E+ H F D HP + ++ ++ + ++ AGY PD S VL+DV
Sbjct: 490 VTKEPGRSWIQHEQTLHYFHANDRT-HPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548
Query: 628 EEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIV 687
+EE+K L HSEKLA+ +GL+ EG+PIRV KNLR+C DCH+ K+ +KV RE+ +
Sbjct: 549 DEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSL 608
Query: 688 RDANRFHHFKDGYCSCKDYW 707
RD NRFH DG CSC DYW
Sbjct: 609 RDKNRFHQIVDGICSCGDYW 628
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 58/290 (20%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN------ 81
Y + +E+ARKV DE P + SW AM++ Y Q +A+T+F +
Sbjct: 97 YGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEF 154
Query: 82 ------------------------IVSWN---------GMVSGFVKNGMVAEARRVFDAM 108
IV WN ++ + K G + EAR +F+ +
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL 214
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLG-----GLLKDSR 159
P R+VVS T+++ GY Q G EEA +F R+ + N V++ +L LL +
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
L +P V+ ++I Y + G L AR LFD MP+R ++W M+ GY+++
Sbjct: 275 QAHCHVLRRELPFYAVLQ-NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 220 RRVDVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREAS-EFFDAM 263
+LF +M + + V+ A+L G +H GRM + FD M
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-GRMEDTGLNIFDGM 382
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 132/323 (40%), Gaps = 89/323 (27%)
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN-------------- 143
+ +AR+V D MP +NVVSWT+M+ Y Q G+ EA +F M +
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 144 ----------------VVSWT----VMLGGLLKD-----SRVEDARKLFDMMPVKDVVAV 178
+V W + +G L D ++++AR++F+ +P +DVV+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSG------------------- 215
T +I GY + G EEA +F + N VT+ ++++
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 216 ----------------YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEF 259
Y++ + AR+LF+ MPER +SW AML+GY+ G RE E
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 260 F----DAMPVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT------WSAMIKV 308
F D VKP V ++ G D +F+ M + GT + ++ +
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 309 YERKGFELEALGLFARMQREGAA 331
R G EA RM + A
Sbjct: 403 LGRAGRIDEAFEFIKRMPSKPTA 425
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/660 (35%), Positives = 349/660 (52%), Gaps = 33/660 (5%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
E N N +V+ + K G +A ++ + + R++V+W +++ Q + EA
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 139 M------PEKNVVSWTVMLGG---LLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEG 189
M P++ +S + +L+ + A L + ++ + ++ YC
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER-----NEVSWTAML 244
++ R +FD M R + W M++GY++N A LF M E N + ++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 245 MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDD 299
SG E VK + + + D G +D A +F KM +RD
Sbjct: 413 PACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQR------EGAAL-----NFPXXXXXXXXXXXXX 348
TW+ MI Y +AL L +MQ +GA+ N
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
G+++HA +++ D+ V SAL+ MY KCG L ++ +F++ P K+V+ WN +I
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
Y HG G+EA+++ R M + GV P++++FI V +ACS+SG V EG IF MK Y VE
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 469 PGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD-AIVWGSLLGACRTHMKLDLAEVAVE 527
P +HYAC+VDLLGRAG++ +A +++ MP + + A W SLLGA R H L++ E+A +
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 528 KLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFV 587
L QLEP A YVLL+++Y+S G W+ VR +K + V K PG SWIE + H FV
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 588 GGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAY 647
GD++ HP+ + LE L +R GY PD S VLH+VEE+EK L HSEKLAIA+
Sbjct: 772 AGDSS-HPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAF 830
Query: 648 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
G+L G IRV KNLRVC DCH A K I+K+ REII+RD RFH FK+G CSC DYW
Sbjct: 831 GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 197/474 (41%), Gaps = 57/474 (12%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N +V+ + K G +VFD + RN VSW S++ E A F M ++NV
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA------------VTNMIGGYCEEGRLEE 193
+ L ++ + + +M K V A + ++ Y + G+L
Sbjct: 197 PSSFTLVSVV--TACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLAS 254
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTH 249
++ L R++VTW T++S +N ++ A + M E +E + +++L +H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 250 SGRMREASE---------------FFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
+R E F + V C +++ G + VF+ M
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG----------RRVFDGM 364
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHG 353
+R G W+AMI Y + + EAL LF M+ L N
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+H +V+ D+D +V + L+ MY + G + A IF + +D+V WN+MITGY
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 414 GLGEEALNVFRDM-----------CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
E+AL + M + P+ I+ + +L +C+ + +G+EI +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYA 543
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
K + + + +VD+ + G + + ++ +++P + + I W ++ A H
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 165/390 (42%), Gaps = 42/390 (10%)
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEV 231
V V ++ Y + G +FD + +RN V+W +++S + ++A + F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 232 MPERN--EVSWT---------------AMLMG---YTHSGRMREASEFFDAMPVKPVVAC 271
M + N S+T ++MG + + R E + F
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI----------I 239
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
N ++ +G G + +K + RD TW+ ++ + LEAL M EG
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKW 390
+ G+++HA +++ D++ +V SAL+ MY C ++ +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSG 449
+F+ + + +WN+MI GYSQ+ +EAL +F M S G+ + + GV+ AC SG
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 450 KVKEGREIFESMKCKYQVEPGIEH----YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
I + V+ G++ ++D+ R G+++ A+ I KM + D +
Sbjct: 420 AFSRKEAIH-----GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVT 473
Query: 506 WGSLLGACRTHMKLDLAEVAVEKLAQLEPK 535
W +++ + A + + K+ LE K
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 39/344 (11%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK- 80
+ + Y Q+ + R+VFD R WNAM+A Y Q +A+ LF E
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGM--FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 81 ----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEA 132
N + G+V V++G + + + R + +++ Y + G ++ A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP---------------VKDVVA 177
R+F +M ++++V+W M+ G + EDA L M + +
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRNVVT----WTTMVSGYARNRRVDVARKLFEVMP 233
+ ++ L + + + K N+ T + +V YA+ + ++RK+F+ +P
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKA 289
++N ++W ++M Y G +EA + M V+ V V + G VD
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 290 VFEKMR-----ERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+F M+ E ++ ++ + R G EA L M R+
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 313/526 (59%), Gaps = 14/526 (2%)
Query: 194 ARALFDEMPKR-NVVTWTTMVSGYARNRRVDVARKLFEVM-----PERNEVSWTAMLMGY 247
A +F ++ K NV W T++ GYA A L+ M E + ++ ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 248 THSGRMREASEFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
T +R E ++ ++ + N ++ + GDV A VF+KM E+D W
Sbjct: 132 TTMADVR-LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+++I + G EAL L+ M +G + G++VH +++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
++L+ ++ L+ +Y +CG + AK +F+ K+ V W S+I G + +G G+EA+ +
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 423 FRDM-CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLL 481
F+ M G+ P +I+F+G+L ACS+ G VKEG E F M+ +Y++EP IEH+ CMVDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 541
RAGQV A E ++ MPM+P+ ++W +LLGAC H DLAE A ++ QLEP ++G YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 542 LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIM 601
LLS+MYAS+ RW DV+ +R+++ V K+PG+S +EV + H F+ GD + HP+ I
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS-HPQSDAIY 489
Query: 602 KMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVM 661
L+ + G LR GY P S V DVEEEEK +++ YHSEK+AIA+ L+ PE PI V+
Sbjct: 490 AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVV 549
Query: 662 KNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KNLRVC DCH AIKL++KV REI+VRD +RFHHFK+G CSC+DYW
Sbjct: 550 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
N ++ + G VA A +VFD MP +++V+W S++ G+ + G EEA L+ M K +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 145 ---------VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEAR 195
+S +G L RV + + +++ + ++ Y GR+EEA+
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 196 ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN-----EVSWTAMLMGYTHS 250
LFDEM +N V+WT+++ G A N A +LF+ M E+++ +L +H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 251 GRMREASEFFDAM 263
G ++E E+F M
Sbjct: 338 GMVKEGFEYFRRM 350
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 56/283 (19%)
Query: 101 ARRVFDAM--PVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-------PEKNVVSWTVML 151
A +VF + P+ NV W +++RGY + GN A L+ M P+ + + +
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 152 GGLLKDSR---------------------------------VEDARKLFDMMPVKDVVAV 178
+ D R V A K+FD MP KD+VA
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARK----LFE 230
++I G+ E G+ EEA AL+ EM + + T +++S A+ + + ++ + +
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 231 VMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
V RN S +L Y GR+ EA FD M K V+ +I+G +G A +
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 291 FEKMRERD-----DGTWSAMIKVYERKGFELEALGLFARMQRE 328
F+ M + + T+ ++ G E F RM+ E
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 19/253 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV- 113
N+++ Y A +F+ PEK++V+WN +++GF +NG EA ++ M + +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 114 ---VSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKL 166
+ S++ + G + +R+ M + +N+ S V+L + RVE+A+ L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN-----VVTWTTMVSGYARNRR 221
FD M K+ V+ T++I G G +EA LF M +T+ ++ +
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 222 VDVARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM 276
V + F M E ++ + M+ +G++++A E+ +MP++P V ++
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
Query: 277 G-FGFDGDVDRAK 288
G GD D A+
Sbjct: 400 GACTVHGDSDLAE 412
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI----V 83
YA G + +A KVFD+ P + +WN+++ + + +P +A+ L+ K I
Sbjct: 166 YANCGDVASAYKVFDKMP--EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+ ++S K G + +RV M RN+ S ++ Y + G VEEA+ LF M
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD-----VVAVTNMIGGYCEEGRLEEA 194
+KN VSWT ++ GL + ++A +LF M + + ++ G ++E
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 195 RALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMP-ERNEVSWTAMLMGYT 248
F M + + + MV AR +V A + + MP + N V W +L T
Sbjct: 344 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 249 HSG 251
G
Sbjct: 404 VHG 406
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/745 (30%), Positives = 380/745 (51%), Gaps = 62/745 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP--- 78
+ ++ Y R + A K+FDE P R +WN +V ++ +AV LF
Sbjct: 27 SASMGFYGRCVSLGFANKLFDEMPK--RDDLAWNEIVMVNLRSGNWEKAVELFREMQFSG 84
Query: 79 ------------------------------------EKNIVSWNGMVSGFVKNGMVAEAR 102
E N+ N ++ + +NG + +R
Sbjct: 85 AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDS 158
+VF++M RN+ SW S++ Y + G V++A L M + ++V+W +L G
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 159 RVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWT 210
+DA + M + ++++++ E G L+ +A+ + + +V T
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP 267
T++ Y + + AR +F++M +N V+W +++ G +++ +++A M +KP
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 268 -VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG----TWSAMIKVYERKGFELEALGLF 322
+ N + G+ G ++A V KM+E+ +W+A+ + G AL +F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
+MQ EG N G++VH +R D YVA+AL+ MY K
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
GDL A IF K + WN M+ GY+ G GEE + F M +G+ PD I+F VL
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
S C SG V+EG + F+ M+ +Y + P IEH +CMVDLLGR+G +++A + ++ M ++PD
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPD 564
Query: 503 AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREK 562
A +WG+ L +C+ H L+LAE+A ++L LEP N+ Y+++ ++Y++ RWEDVE +R
Sbjct: 565 ATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNL 624
Query: 563 IKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSF 622
++ V +SWI++++ H+F + HP++ I L +L ++ +GY PD S
Sbjct: 625 MRNNRVRVQDLWSWIQIDQTVHIFY-AEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC 683
Query: 623 VLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTG 682
+ D+ + EK L H+EKLA+ YGL+K PIRV+KN +C D H+ K ++ +
Sbjct: 684 IHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRN 743
Query: 683 REIIVRDANRFHHFKDGYCSCKDYW 707
REI++++ R HHF+DG CSC D W
Sbjct: 744 REIVLQEGARVHHFRDGKCSCNDSW 768
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 167/383 (43%), Gaps = 47/383 (12%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D V+ +G Y L A LFDEMPKR+ + W +V R+ + A +LF M
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 234 ---------------------------------------ERNEVSWTAMLMGYTHSGRMR 254
E N ++++ Y+ +G++
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLE 141
Query: 255 EASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDGTWSAMIKVYE 310
+ + F++M + + + N ++ + G VD A + ++M + D TW++++ Y
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 311 RKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLY 370
KG +A+ + RMQ G + G+ +H ++R++ D+Y
Sbjct: 202 SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVY 261
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG 430
V + LI MY+K G L A+ +F+ K++V WNS+++G S L ++A + M G
Sbjct: 262 VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 431 VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDA 490
+ PD I++ + S + GK ++ ++ MK K V P + + + + G +A
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 491 VEIVEKMPME---PDAIVWGSLL 510
+++ KM E P+A +LL
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLL 403
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 169/386 (43%), Gaps = 64/386 (16%)
Query: 3 YGYSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF 62
+GY LR+ + C S I Y+R G++E +RKVF+ R SSWN+++++Y
Sbjct: 112 HGY-VLRLGLESNVSMCNSL--IVMYSRNGKLELSRKVFNSMK--DRNLSSWNSILSSYT 166
Query: 63 QAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVV 114
+ A+ L + + +IV+WN ++SG+ G+ +A V M + +
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMM 170
S +S+++ + G+++ + + + +V T ++ +K + AR +FDMM
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 171 PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYAR----NRRV 222
K++VA +++ G L++A AL M K + +TW ++ SGYA + +
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 223 DVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP----------VV 269
DV K+ E N VSWTA+ G + +G R A + F M V P ++
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 270 ACNEMIMG--------------------------FGFDGDVDRAKAVFEKMRERDDGTWS 303
C ++ +G GD+ A +F ++ + +W+
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 304 AMIKVYERKGFELEALGLFARMQREG 329
M+ Y G E + F+ M G
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAG 492
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 244 LMGYT-HSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
+G T H G ++ + D V + + GF A +F++M +RDD W
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGF------ANKLFDEMPKRDDLAW 57
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+ ++ V R G +A+ LF MQ GA GRQ+H ++R
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
+ ++ + ++LI MY + G L ++ +FN +++ WNS+++ Y++ G ++A+ +
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLG 482
+M + G+ PD +++ +LS + G K+ + + M+ ++P + ++ +
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVA 236
Query: 483 RAGQV 487
G +
Sbjct: 237 EPGHL 241
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/680 (34%), Positives = 357/680 (52%), Gaps = 68/680 (10%)
Query: 86 NGMVSGFVKNGMVAEAR--RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN 143
N + + ++ G V AR + D+ P + ++ ++ Y + + E A + P +N
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARN 72
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV-----------AVTNM----IGGYCEE 188
VVSWT ++ GL ++ A F M + VV AV ++ G
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
++ R L +V + Y + R D ARKLF+ +PERN +W A +
Sbjct: 133 LAVKCGRIL-------DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 249 HSGRMREASEFF------DAMPVKPVV-----ACNE------------MIMGFGFDGDVD 285
GR REA E F D P AC++ +++ GFD DV
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 286 ----------------RAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
++ +F +M ++ +W +++ Y + + +A L+ R +++
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ + GR +HA V++ ++ ++V SAL+ MY KCG + ++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV--PPDDISFIGVLSACSY 447
F+ P K++V NS+I GY+ G + AL +F +M G P+ ++F+ +LSACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWG 507
+G V+ G +IF+SM+ Y +EPG EHY+C+VD+LGRAG V A E ++KMP++P VWG
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 508 SLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
+L ACR H K L +A E L +L+PK++G +VLLS+ +A+ GRW + VRE++K
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDV 627
+ K GYSWI V+ + H F D + H I L +L + AGY PD L+D+
Sbjct: 546 IKKGAGYSWITVKNQVHAFQAKDRS-HILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Query: 628 EEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIV 687
EEEEK + +HSEKLA+A+GLL +P +PIR+ KNLR+CGDCHS K ++ REIIV
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664
Query: 688 RDANRFHHFKDGYCSCKDYW 707
RD NRFH FKDG CSCKDYW
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 95/338 (28%)
Query: 24 AISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF--------- 74
A Y + ++ARK+FDE P R +WNA ++ +P +A+ F
Sbjct: 149 AFDMYCKTRLRDDARKLFDEIP--ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 75 ------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
+ + ++ NG++ + K + + +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE----------------------- 141
F M +N VSW S+V YVQ E+A L+ R +
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 142 -----------KNVVSWTVMLGGLLKD-----SRVEDARKLFDMMPVKDVVAVTNMIGGY 185
K V T+ +G L D +ED+ + FD MP K++V ++IGGY
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Query: 186 CEEGRLEEARALFDEM------PKRNVVTWTTMVSGYARNRRVDVARKLFEVM------- 232
+G+++ A ALF+EM P N +T+ +++S +R V+ K+F+ M
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
P S ++G +G + A EF MP++P ++
Sbjct: 447 PGAEHYSCIVDMLG--RAGMVERAYEFIKKMPIQPTIS 482
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 121/325 (37%), Gaps = 93/325 (28%)
Query: 61 YFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF------DAMP----- 109
Y + A LF+ PE+N+ +WN +S V +G EA F D P
Sbjct: 153 YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITF 212
Query: 110 ---VRNVVSWTSMVRGYVQEG-------------------------NVEEAERLFWRMPE 141
+ W + G G + +E +F M
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLF-----------DMM-------------------- 170
KN VSW ++ +++ E A L+ D M
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332
Query: 171 ---PVKDVVAVTNMIGG-----YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
VK V T +G Y + G +E++ FDEMP++N+VT +++ GYA +V
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 223 DVARKLFEVM------PERNEVSWTAMLMGYTHSGRMREASEFFDAM-------PVKPVV 269
D+A LFE M P N +++ ++L + +G + + FD+M P
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKM 294
+C ++ G G V+RA +KM
Sbjct: 453 SC--IVDMLGRAGMVERAYEFIKKM 475
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 58/240 (24%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
G I Y + QI ++ +F E + SW ++VAAY Q H+ +A L+
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGT--KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 75 -ETTP-------------------------------EKNIVSWNGMVSGFVKNGMVAEAR 102
ET+ E+ I + +V + K G + ++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLK 156
+ FD MP +N+V+ S++ GY +G V+ A LF M P N +++ +L +
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 157 DSRVEDARKLFDMM--------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
VE+ K+FD M + + +M+G G +E A +MP + ++
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG---RAGMVERAYEFIKKMPIQPTIS 482
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 16/173 (9%)
Query: 47 IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFD 106
+ RT +A+V Y + + F+ PEKN+V+ N ++ G+ G V A +F+
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 107 AM------PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP-----EKNVVSWTVMLGGLL 155
M P N +++ S++ + G VE ++F M E ++ ++ L
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 156 KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCE-EGR----LEEARALFDEMPK 203
+ VE A + MP++ ++V + C G+ L A LF PK
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/625 (35%), Positives = 343/625 (54%), Gaps = 57/625 (9%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N +V+ + K G + A +VFD MP R+ ++W S++ + + N+
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA----------------LNQANLS 85
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN 205
T+ + + D + V A N+ G + GR + E
Sbjct: 86 GKTLSV---FSSVGSSSGLRPDDFVFSALVKACANL--GSIDHGRQVHCHFIVSEYANDE 140
Query: 206 VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPV 265
VV +++V YA+ ++ A+ +F+ + +N +SWTAM+ GY SGR EA E F +PV
Sbjct: 141 VVK-SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPV 199
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
K + +W+A+I + + G LEA +F M
Sbjct: 200 KNLY-------------------------------SWTALISGFVQSGKGLEAFSVFTEM 228
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXD-HGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
+RE + P GRQVH ++ FD +++++ALI MY KC D
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
++ AK IF+R +DVV W S+I G +QHG E+AL ++ DM GV P++++F+G++ A
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
CS+ G V++GRE+F+SM Y + P ++HY C++DLLGR+G +++A ++ MP PD
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEP 408
Query: 505 VWGSLLGACRTHMKLDLA-EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKI 563
W +LL AC+ + + +A ++ + K+ Y+LLS++YAS W V R K+
Sbjct: 409 TWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKL 468
Query: 564 KTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLR-DAGYSPDHSF 622
V K PG+S +EV K+ +F G+ + HP + I ++L++L+ +R GY PD S+
Sbjct: 469 GEMEVRKDPGHSSVEVRKETEVFYAGETS-HPLKEDIFRLLKKLEEEMRIRNGYVPDTSW 527
Query: 623 VLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTG 682
+LHD++E+EK L +HSE+ A+AYGLLK G PIR++KNLRVCGDCH +K I+++T
Sbjct: 528 ILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITE 587
Query: 683 REIIVRDANRFHHFKDGYCSCKDYW 707
REIIVRDA R+HHFK G CSC D+W
Sbjct: 588 REIIVRDATRYHHFKGGKCSCNDFW 612
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 154/311 (49%), Gaps = 31/311 (9%)
Query: 29 ARIGQIENARKVFDETPHIHRTTSSW-------NAMVAAYFQAHQPHQAVTLFETTPEKN 81
A +G I++ R+V H H S + +++V Y + + A +F++ KN
Sbjct: 116 ANLGSIDHGRQV-----HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+SW MVSG+ K+G EA +F +PV+N+ SWT+++ G+VQ G EA +F M
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
Query: 142 KNV-----VSWTVMLGGLLKDSRVEDARKLFDM---MPVKDVVAVTN-MIGGYCEEGRLE 192
+ V + + ++G + R++ + + V ++N +I Y + +
Sbjct: 231 ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVI 290
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYT 248
A+ +F M R+VV+WT+++ G A++ + + A L++ M NEV++ ++ +
Sbjct: 291 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS 350
Query: 249 HSGRMREASEFFDAMP----VKPVVACNEMIMG-FGFDGDVDRAKAVFEKMR-ERDDGTW 302
H G + + E F +M ++P + ++ G G +D A+ + M D+ TW
Sbjct: 351 HVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTW 410
Query: 303 SAMIKVYERKG 313
+A++ +R+G
Sbjct: 411 AALLSACKRQG 421
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
+ +HA +V+ Q +A+ L+ +Y KCG A +F+ P +D + W S++T +Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 413 HGL-GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
L G+ SG+ PDD F ++ AC+ G + GR++ C + V
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV----HCHFIVSEYA 137
Query: 472 EH---YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
+ +VD+ + G +N A + + + ++ + I W +++ + K E A+E
Sbjct: 138 NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG---YAKSGRKEEALEL 193
Query: 529 LAQLEPKNAGPYVLLSHMYASKGR 552
L KN + L + G+
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGK 217
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 318/548 (58%), Gaps = 21/548 (3%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
DV + +I Y + G +E AR +FD M +R++V+W TM+ Y RNR A +F M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM- 153
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNEMIMGFGFD------- 281
RNE +T S + DA+ K V C ++ + G
Sbjct: 154 -RNE---GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 282 -GDVDRAKAVFEKMRERDDGTWSAMIKVY-ERKGFELEALGLFARMQREGAALNFPXXXX 339
G + A VFE M+++ TWS+M+ Y + K +E EAL L+ R QR N
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE-EALLLYRRAQRMSLEQNQFTLSS 268
Query: 340 XXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD 399
G+Q+HA + +S F +++VAS+ + MY KCG L + IF+ K+
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
+ +WN++I+G+++H +E + +F M G+ P++++F +LS C ++G V+EGR F+
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 460 SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
M+ Y + P + HY+CMVD+LGRAG +++A E+++ +P +P A +WGSLL +CR + L
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL 448
Query: 520 DLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEV 579
+LAEVA EKL +LEP+NAG +VLLS++YA+ +WE++ R+ ++ V K+ G SWI++
Sbjct: 449 ELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Query: 580 EKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYH 639
+ K H F G++ HP I L+ L R GY P LHDVE +K L H
Sbjct: 509 KDKVHTFSVGESG-HPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQH 567
Query: 640 SEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDG 699
SEKLA+ +GL+ +PE P+R+MKNLR+C DCH +K + T R IIVRD NRFHHF DG
Sbjct: 568 SEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDG 627
Query: 700 YCSCKDYW 707
+CSC D+W
Sbjct: 628 HCSCGDFW 635
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 53/290 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF---------- 74
I+ Y++ G +E AR+VFD + R+ SWN M+ Y + +A+ +F
Sbjct: 103 INAYSKCGFVELARQVFDGM--LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Query: 75 -----------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRVF 105
+T + N+ ++ + K GM+ +A +VF
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVE 161
++M ++ V+W+SMV GYVQ N EEA L+ R E+N + + ++ + +
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 162 DARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
+ +++ ++ +V ++ + Y + G L E+ +F E+ ++N+ W T++SG+A
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 218 RNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
++ R LFE M + NEV+++++L H+G + E FF M
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 155/351 (44%), Gaps = 22/351 (6%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
E ++ N +++ + K G V AR+VFD M R++VSW +M+ Y + EA +F
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 139 MPEKNVVSWTVMLGGLLKDSRVE-DAR--KLFDMMPVKDVVAV-----TNMIGGYCEEGR 190
M + + +L V DA K + VK + + T ++ Y + G
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF----EVMPERNEVSWTAMLMG 246
+++A +F+ M ++ VTW++MV+GY +N+ + A L+ + E+N+ + ++++
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 247 YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGT 301
++ + E + A+ K N + D G + + +F +++E++
Sbjct: 273 CSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
W+ +I + + E + LF +MQ++G N + GR+ +L+
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLM 390
Query: 362 RSEFDQDLYVA--SALITMYVKCGDLVRAKWIFNRYPLKDVV-MWNSMITG 409
R+ + V S ++ + + G L A + P +W S++
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
+ H +++R + + D+ + + LI Y KCG + A+ +F+ + +V WN+MI Y++
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+ + EAL++F +M G + + VLSAC + E +++ + K ++ +
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLY 198
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
++DL + G + DAV++ E M + ++ W S++
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 237
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 20/241 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----ETT 77
T + YA+ G I++A +VF+ +++ +W++MVA Y Q +A+ L+ +
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQ--DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV----RNVVSWTSMVRGYVQEGNVEEAE 133
E+N + + ++ + E +++ + NV +S V Y + G++ E+
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEG 189
+F + EKN+ W ++ G K +R ++ LF+ M + V ++++ G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 190 RLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-WTAM 243
+EE R F M NVV ++ MV R + A +L + +P S W ++
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 244 L 244
L
Sbjct: 439 L 439
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEA----RRVFDAMPV 110
A++ Y + AV +FE+ +K+ V+W+ MV+G+V+N EA RR
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKL 166
+N + +S++ + E +++ + + NV + + K + ++ +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRV 222
F + K++ +I G+ + R +E LF++M + N VT+++++S V
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 223 DVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
+ R+ F++M N V ++ M+ +G + EA E ++P P +
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/686 (34%), Positives = 377/686 (54%), Gaps = 28/686 (4%)
Query: 47 IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFD 106
+ +T N V Y + + A F +T E N+ S+N +V + K+ + AR++FD
Sbjct: 39 VASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD 98
Query: 107 AMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD--SRVEDAR 164
+P + VS+ +++ GY A LF RM + L GL+ RV+ +
Sbjct: 99 EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK 158
Query: 165 KL--FDMMPVKDVVAVTN--MIGGYCEEGRLEEARALFDEMPK-RNVVTWTTMVSGYARN 219
+L F + D + N + Y + G L EA ++F M + R+ V+W +M+ Y ++
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 220 RRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMI 275
+ A L++ M + + + ++L T + +F + +K N +
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL-IKAGFHQNSHV 277
Query: 276 ----MGF-----GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE-RKGFELEALGLFARM 325
+ F G DG D K VF+++ D W+ MI Y + EA+ F +M
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEK-VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD-LYVASALITMYVKCGD 384
QR G + +Q+H ++S + + V +ALI++Y K G+
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
L A+W+F+R P + V +N MI GY+QHG G EAL +++ M SG+ P+ I+F+ VLSA
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C++ GKV EG+E F +MK +++EP EHY+CM+DLLGRAG++ +A ++ MP +P ++
Sbjct: 457 CAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK 564
W +LLGACR H + LAE A +L ++P A PYV+L++MYA +WE++ VR+ ++
Sbjct: 517 AWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMR 576
Query: 565 TRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVL 624
+ + K PG SWIEV+KK H+FV D + HP + + LE + ++ GY D + +
Sbjct: 577 GKRIRKKPGCSWIEVKKKKHVFVAEDWS-HPMIREVNEYLEEMMKKMKKVGYVMDKKWAM 635
Query: 625 ---HDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVT 681
+ E ++ LG+HSEKLA+A+GL+ +G + V+KNLR+CGDCH+AIK ++ V
Sbjct: 636 VKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVA 695
Query: 682 GREIIVRDANRFHHFKDGYCSCKDYW 707
GREIIVRD RFH FKDG CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 67/354 (18%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET 76
+ + ++ Y++ G + A VF + R SWN+M+ AY Q + +A+ L++
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDEL-RDEVSWNSMIVAYGQHKEGAKALALYKE 230
Query: 77 TPEKN--------------IVSWNGMV-----------SGFVKNGMVA------------ 99
K + S + ++ +GF +N V
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 100 -----EARRVFDAMPVRNVVSWTSMVRGY-VQEGNVEEAERLFWRMP-------EKNVVS 146
++ +VF + ++V W +M+ GY + E EEA + F +M + + V
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 147 WTVMLGGLLKDSRVEDARKLF--DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR 204
T L S+ + L +P + +I Y + G L++AR +FD MP+
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFF 260
N V++ M+ GYA++ A L++ M + N++++ A+L H G++ E E+F
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYF 470
Query: 261 DAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG-TWSAMI 306
+ M P +C MI G G ++ A+ + M + W+A++
Sbjct: 471 NTMKETFKIEPEAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/749 (33%), Positives = 371/749 (49%), Gaps = 100/749 (13%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------ 108
NA+V+ Y A+ LF+ PE+N+VSWN M+ F NG E+ + M
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 109 --------------PV----------RNVVSWTSMVR-------------GYVQEGNVEE 131
PV + V W +R Y + G +
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 132 AERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM--------PVK-DVVAVTNMI 182
A+ +F KNVVSW M+GG S D FD++ VK D V + N +
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGF---SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 183 GGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV 238
E L + L K+ N + V+ YA+ + A+++F + +
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 239 SWTAMLMGYTHSG----------RMREASEFFDAMPVKPVV-ACNEM--------IMGFG 279
SW A++ G+ S +M+ + D+ V ++ AC+++ + GF
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 280 FD--------------------GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
G++ +A+F+ M ++ +W+ +I Y + GF AL
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
G+F +M G L GR+ HA ++ + D ++A +LI MY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
K G + ++ +FN K WN+MI GY HGL +EA+ +F +M +G PDD++F+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV-EKMP 498
GVL+AC++SG + EG + MK + ++P ++HYAC++D+LGRAGQ++ A+ +V E+M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 499 MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEV 558
E D +W SLL +CR H L++ E KL +LEP+ YVLLS++YA G+WEDV
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 559 VREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSP 618
VR+++ S+ K G SWIE+ +K FV G+ + I + L+ + GY P
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEE-IKSLWSILEMKISKMGYRP 881
Query: 619 DHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIA 678
D V HD+ EEEK L HSEKLA+ YGL+K EG IRV KNLR+C DCH+A KLI+
Sbjct: 882 DTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 941
Query: 679 KVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KV REI+VRD RFHHFK+G CSC DYW
Sbjct: 942 KVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/576 (20%), Positives = 231/576 (40%), Gaps = 98/576 (17%)
Query: 57 MVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF-------DAMP 109
++ Y P + +F+ KN+ WN ++S + +N + E F D +P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 110 ---------------------------------VRNVVSWTSMVRGYVQEGNVEEAERLF 136
V +V ++V Y G V +A +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 137 WRMPEKNVVSWTVM----------------LGGLLKD----SRVEDARKLFDMMPV---- 172
MPE+N+VSW M LG ++++ + + D L ++PV
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 173 -------------------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
K++V ++ Y + G + A+ +F +NVV+W TMV
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 214 SGYA----RNRRVDVARKLFEVMPE--RNEVSWTAMLMGYTHSGRMREASEF----FDAM 263
G++ + DV R++ + +EV+ + H + E
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
V + N + + G + A+ VF +R + +W+A+I + + +L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
+M+ G + G++VH ++R+ ++DL+V +++++Y+ CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
+L + +F+ K +V WN++ITGY Q+G + AL VFR M L G+ IS + V
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
ACS ++ GRE + K+ +E ++D+ + G + + ++ + E
Sbjct: 606 ACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKST 663
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
W +++ H LA+ A++ +++ P
Sbjct: 664 ASWNAMIMGYGIH---GLAKEAIKLFEEMQRTGHNP 696
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 34/336 (10%)
Query: 151 LGGLLKDS----RVEDARKLFDMMP-----VKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
LG LL+ S +E RK+ ++ D V T +I Y G +++R +FD +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 202 PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMG-YTHSGRMREASEFF 260
+N+ W ++S Y+RN D + F M +S T +L +T+ ++ +
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEM-----ISTTDLLPDHFTYPCVIKACAGMS 201
Query: 261 D-------------AMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
D V+ V N ++ +G G V A +F+ M ER+ +W++MI+
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH----GRQVHARLVRS 363
V+ GF E+ L M E F + G+ VH V+
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
D++L + +AL+ MY KCG + A+ IF K+VV WN+M+ G+S G +V
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 424 RDMCLSG--VPPDDISFIGVLSACSYSGKVKEGREI 457
R M G V D+++ + + C + + +E+
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 76/355 (21%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP------HQAV 71
+ + ++ YA+ G + A++VF +T +SWNA++ + Q++ P H +
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 72 TLFETTP---------------------------------EKNIVSWNGMVSGFVKNGMV 98
+ P E+++ + ++S ++ G +
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 99 AEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGL---- 154
+ +FDAM +++VSW +++ GY+Q G + A +F +M V + + L G+
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-----VLYGIQLCGISMMP 602
Query: 155 ----------LKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR 204
L+ R A L ++ D ++I Y + G + ++ +F+ + ++
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLE-DDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFF 260
+ +W M+ GY + A KLFE M +++++ +L HSG + E +
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 261 DAMP----VKPVV---ACNEMIMGFGFDGDVDRA-KAVFEKMRERDD-GTWSAMI 306
D M +KP + AC +I G G +D+A + V E+M E D G W +++
Sbjct: 722 DQMKSSFGLKPNLKHYAC--VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
V C +I + G D ++ VF+ +R ++ W+A+I Y R E L F M
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 329 GAAL----NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
L +P G VH +V++ +D++V +AL++ Y G
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGI---GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL----SGVPPDDISFIG 440
+ A +F+ P +++V WNSMI +S +G EE+ + +M PD + +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
VL C+ ++ G+ + K +++ + ++D+ + G + +A +++ KM
Sbjct: 298 VLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNN 355
Query: 501 PDAIVWGSLLGA 512
+ + W +++G
Sbjct: 356 KNVVSWNTMVGG 367
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
I F GD+D++ ++ D+ + A + V E G L+A G +R+ +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASG-----KRKDIEM-- 102
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIFN 393
GR++H + S D + + +ITMY CG ++++F+
Sbjct: 103 ------------------GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 394 RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM-CLSGVPPDDISFIGVLSACSYSGKVK 452
K++ WN++I+ YS++ L +E L F +M + + PD ++ V+ AC+ V
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
G + + K + + +V G G V DA+++ + MP E + + W S++
Sbjct: 205 IGLAV-HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI 260
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/646 (35%), Positives = 349/646 (54%), Gaps = 32/646 (4%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-----P 140
N +++ +VK AR++FD MP RNVVSW +M++GY G E +LF M
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKL------FDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
N TV+ R+E+ ++ + ++ + V + C G E
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS-GNGEAI 191
Query: 195 RALFDEMPKRNVVTWTTMVSGY----ARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHS 250
R L D++P ++ +++ +SGY A +DV RK N +++ + L +++
Sbjct: 192 RVL-DDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 251 GRMREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
+ A + M V AC +I +G G V A+ VF+ ++ + ++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 307 KVY-ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF 365
Y + K FE EAL LF++M + N G +H +++S +
Sbjct: 311 DAYFQDKSFE-EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY 369
Query: 366 DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
+ V +AL+ MY K G + A+ F+ +D+V WN+MI+G S HGLG EAL F
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M +G P+ I+FIGVL ACS+ G V++G F + K+ V+P I+HY C+V LL +AG
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 486 QVNDAVEIVEKMPMEPDAIVWGSLLGAC--RTHMKL--DLAEVAVEKLAQLEPKNAGPYV 541
DA + + P+E D + W +LL AC R + +L +AE A+EK P ++G YV
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKY----PNDSGVYV 545
Query: 542 LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIM 601
LLS+++A WE V VR + R V K PG SWI + + H+F+ DN HPE +I
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ-HPEITLIY 604
Query: 602 KMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVM 661
++ + ++ GYSPD + HDV+EE++ +L YHSEKLA+AYGL+K PE P+ V
Sbjct: 605 AKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVT 664
Query: 662 KNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KN+R+C DCHSAIKLI+K++ R I++RD+NRFHHF DG CSC DYW
Sbjct: 665 KNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 13/354 (3%)
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV-ARKLFEV 231
+D + ++I Y + AR LFD MP+RNVV+W M+ GY +N D KLF+
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKS 125
Query: 232 M-----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC----NEMIMGFGFDG 282
M NE T + ++SGR+ E +F +++ N ++ +
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS 185
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
A V + + D +S+ + Y G E L + + E N
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
+ QVH+R+VR F+ ++ ALI MY KCG ++ A+ +F+ +++ +
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+++ Y Q EEALN+F M VPP++ +F +L++ + +K+G ++ +
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLV 364
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
K + +V++ ++G + DA + M D + W +++ C H
Sbjct: 365 LKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 353 GRQVHARLV---RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITG 409
G +HA L+ +S +D Y ++LI +YVKC + VRA+ +F+ P ++VV W +M+ G
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 410 YSQHGLGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
Y G E L +F+ M SG P++ V +CS SG+++EG++ F KY +
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ-FHGCFLKYGLI 168
Query: 469 PGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLG 511
+V + +A+ +++ +P ++ +L G
Sbjct: 169 SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 62/286 (21%)
Query: 7 TLRVCMVQVRF----QCTSTGA-ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVA-A 60
L+V VRF + + GA I+ Y + G++ A++VFD+T H N + A
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT---HAQNIFLNTTIMDA 312
Query: 61 YFQAHQPHQAVTLF------ETTPEK---------------------------------N 81
YFQ +A+ LF E P + +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
++ N +V+ + K+G + +AR+ F M R++V+W +M+ G G EA F RM
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 142 KNVVSWTVMLGGLLKDSR-----------VEDARKLFDMMPVKDVVAVTNMIGGYCEEGR 190
+ + G+L+ K FD+ P D+ T ++G + G
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQP--DIQHYTCIVGLLSKAGM 490
Query: 191 LEEARALFDEMP-KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER 235
++A P + +VV W T+++ R + +K+ E E+
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEK 536
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 279/437 (63%), Gaps = 2/437 (0%)
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
N ++ + GDV A VF+KM E+D W+++I + G EAL L+ M +G
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI 391
+ G++VH +++ ++L+ ++ L+ +Y +CG + AK +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 392 FNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM-CLSGVPPDDISFIGVLSACSYSGK 450
F+ K+ V W S+I G + +G G+EA+ +F+ M G+ P +I+F+G+L ACS+ G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
VKEG E F M+ +Y++EP IEH+ CMVDLL RAGQV A E ++ MPM+P+ ++W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 511 GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIK 570
GAC H DLAE A ++ QLEP ++G YVLLS+MYAS+ RW DV+ +R+++ V K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 571 LPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEE 630
+PG+S +EV + H F+ GD + HP+ I L+ + G LR GY P S V DVEEE
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKS-HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEE 385
Query: 631 EKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDA 690
EK +++ YHSEK+AIA+ L+ PE PI V+KNLRVC DCH AIKL++KV REI+VRD
Sbjct: 386 EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDR 445
Query: 691 NRFHHFKDGYCSCKDYW 707
+RFHHFK+G CSC+DYW
Sbjct: 446 SRFHHFKNGSCSCQDYW 462
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G +H+ ++RS F +YV ++L+ +Y CGD+ A +F++ P KD+V WNS+I G+++
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+G EEAL ++ +M G+ PD + + +LSAC+ G + G+ + M K + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLH 125
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++DL R G+V +A + ++M ++ +++ W SL+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 17/193 (8%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
N ++ + G VA A +VFD MP +++V+W S++ G+ + G EEA L+ M K +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 145 ---------VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEAR 195
+S +G L RV + + +++ + ++ Y GR+EEA+
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 196 ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN-----EVSWTAMLMGYTHS 250
LFDEM +N V+WT+++ G A N A +LF+ M E+++ +L +H
Sbjct: 145 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 204
Query: 251 GRMREASEFFDAM 263
G ++E E+F M
Sbjct: 205 GMVKEGFEYFRRM 217
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 19/253 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV- 113
N+++ Y A +F+ PEK++V+WN +++GF +NG EA ++ M + +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 114 ---VSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKL 166
+ S++ + G + +R+ M + +N+ S V+L + RVE+A+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN-----VVTWTTMVSGYARNRR 221
FD M K+ V+ T++I G G +EA LF M +T+ ++ +
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 222 VDVARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM 276
V + F M E ++ + M+ +G++++A E+ +MP++P V ++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 277 G-FGFDGDVDRAK 288
G GD D A+
Sbjct: 267 GACTVHGDSDLAE 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSG 215
V A K+FD MP KD+VA ++I G+ E G+ EEA AL+ EM + + T +++S
Sbjct: 39 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 98
Query: 216 YARNRRVDVARK----LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC 271
A+ + + ++ + +V RN S +L Y GR+ EA FD M K V+
Sbjct: 99 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 158
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERD-----DGTWSAMIKVYERKGFELEALGLFARMQ 326
+I+G +G A +F+ M + + T+ ++ G E F RM+
Sbjct: 159 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 218
Query: 327 RE 328
E
Sbjct: 219 EE 220
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI----V 83
YA G + +A KVFD+ P + +WN+++ + + +P +A+ L+ K I
Sbjct: 33 YANCGDVASAYKVFDKMP--EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+ ++S K G + +RV M RN+ S ++ Y + G VEEA+ LF M
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD-----VVAVTNMIGGYCEEGRLEEA 194
+KN VSWT ++ GL + ++A +LF M + + ++ G ++E
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 195 RALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMP-ERNEVSWTAMLMGYT 248
F M + + + MV AR +V A + + MP + N V W +L T
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 249 HSG 251
G
Sbjct: 271 VHG 273
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/613 (35%), Positives = 341/613 (55%), Gaps = 21/613 (3%)
Query: 114 VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDA----RKLFDM 169
+S +++ +EG +++A R+ + + ++ +++ S + DA R + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 170 MPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM-----VSGYARNRRVDV 224
+D T +IG Y + G ++ AR +FD+ KR + W + ++G+ + +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV-LGL 165
Query: 225 ARKLFEVMPERNEVSWTAMLMGYTHS----GRMREASEFFDAMPVKP----VVACNEMIM 276
K+ + E + ++T +L S + + E + + V ++
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 277 GFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG--AALNF 334
+ G VD A VF M R+ +WSAMI Y + G EAL F M RE ++ N
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
+ G+ +H ++R D L V SAL+TMY +CG L + +F+R
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 395 YPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEG 454
+DVV WNS+I+ Y HG G++A+ +F +M +G P ++F+ VL ACS+ G V+EG
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 455 REIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACR 514
+ +FE+M + ++P IEHYACMVDLLGRA ++++A ++V+ M EP VWGSLLG+CR
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGY 574
H ++LAE A +L LEPKNAG YVLL+ +YA W++V+ V++ ++ R + KLPG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 575 SWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTH 634
W+EV +K + FV D +P I L +L +++ GY P VL+++E EEK
Sbjct: 526 CWMEVRRKMYSFVSVD-EFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 635 SLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFH 694
+ HSEKLA+A+GL+ +G PIR+ KNLR+C DCH K I+K +EI+VRD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 695 HFKDGYCSCKDYW 707
FK+G CSC DYW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 144/356 (40%), Gaps = 79/356 (22%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------ 74
+T I Y+ +G ++ ARKVFD+T RT WNA+ A A + + L+
Sbjct: 115 ATKLIGMYSDLGSVDYARKVFDKTRK--RTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 75 -------------------ETTPE------------------KNIVSWNGMVSGFVKNGM 97
E T ++ +V + + G
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVML 151
V A VF MPVRNVVSW++M+ Y + G EA R F M N V+ +L
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 152 GGLLKDSRVEDA---------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP 202
+ +E R L ++PV ++ ++ Y G+LE + +FD M
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPV-----ISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASE 258
R+VV+W +++S Y + A ++FE M V++ ++L +H G + E
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 259 FFDAM----PVKPVV---ACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
F+ M +KP + AC M+ G +D A + + MR E W +++
Sbjct: 408 LFETMWRDHGIKPQIEHYAC--MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 28/261 (10%)
Query: 96 GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
G V AR+VFD R + W ++ R G+ EE L+W+M V S +L
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 156 KDSRVEDARKLFDMMPVKDVVA-------------VTNMIGGYCEEGRLEEARALFDEMP 202
K V + +M K++ A +T ++ Y G ++ A +F MP
Sbjct: 186 KAC-VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLF-EVMPER-----NEVSWTAMLMGYTHSGRMREA 256
RNVV+W+ M++ YA+N + A + F E+M E N V+ ++L + +
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 257 SEFFDAM------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE 310
+ + PV++ ++ +G G ++ + VF++M +RD +W+++I Y
Sbjct: 305 KLIHGYILRRGLDSILPVISA--LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 311 RKGFELEALGLFARMQREGAA 331
G+ +A+ +F M GA+
Sbjct: 363 VHGYGKKAIQIFEEMLANGAS 383
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/736 (31%), Positives = 376/736 (51%), Gaps = 57/736 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF-------------QAHQ--PH- 68
++ Y + G ++A +FDE P R S+ + Y + H+ PH
Sbjct: 91 LNAYVKAGFDKDALNLFDEMPE--RNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHV 148
Query: 69 --QAVTLFETTPEKNIVSW------------NGMVSGFVKN-----GMVAEARRVFDAMP 109
+ LF + + I W N V + N G V AR VF+ +
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDA------ 163
+++V W +V YV+ G E++ +L M + LK S A
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 164 --RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR 221
++ V D ++ Y + G + +A +F+EMPK +VV W+ M++ + +N
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 222 VDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACN 272
+ A LF M E NE + +++L G G+ E + VK + N
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+I + +D A +F ++ +++ +W+ +I YE G +A +F R ++
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
D G QVH +++ + + V+++LI MY KCGD+ A+ +F
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
N DV WN++I+GYS HGLG +AL + M P+ ++F+GVLS CS +G +
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+G+E FESM + +EP +EHY CMV LLGR+GQ++ A++++E +P EP ++W ++L A
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Query: 513 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLP 572
+ A + E++ ++ PK+ YVL+S+MYA +W +V +R+ +K V K P
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEP 687
Query: 573 GYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEK 632
G SWIE + H F G ++ HP+ +I MLE L+ AGY PD + VL D+++EEK
Sbjct: 688 GLSWIEHQGDVHYFSVGLSD-HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 633 THSLGYHSEKLAIAYGLLKVPEGMP-IRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDAN 691
L HSE+LA+AYGL+++P I +MKNLR+C DCHSA+K+I+ + R++++RD N
Sbjct: 747 DKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 692 RFHHFKDGYCSCKDYW 707
RFHHF G CSC D+W
Sbjct: 807 RFHHFHAGVCSCGDHW 822
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 211/506 (41%), Gaps = 65/506 (12%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D+ A ++ Y + G ++A LFDEMP+RN V++ T+ GYA + + +L
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRAK 288
E N +T+ L + + E + + VK N +I + G VD A+
Sbjct: 143 ELNPHVFTSFLKLFVSLDK-AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
VFE + +D W+ ++ Y G+ ++L L + M+ G N
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
D + VH +++++ + D V L+ +Y + GD+ A +FN P DVV W+ MI
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
+ Q+G EA+++F M + V P++ + +L+ C+ GK E + K +
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI-GKCSGLGEQLHGLVVKVGFD 380
Query: 469 PGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA------------------------- 503
I ++D+ + +++ AV++ ++ + +
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 504 ---------IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL---LSHMYASKG 551
+ + S LGAC + +DL V V LA ++ NA + L MYA G
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLG-VQVHGLA-IKTNNAKKVAVSNSLIDMYAKCG 498
Query: 552 RWEDVEVVREKIKTRSVIK----LPGYSWIEVEKKAH--MFVGGDNNCHPEQPIIMKML- 604
+ + V +++T V + GYS + ++A + + D +C P + +L
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 605 ------------ERLDGLLRDAGYSP 618
E + ++RD G P
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEP 584
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 145/344 (42%), Gaps = 63/344 (18%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
G + Y ++G + +A KVF+E P W+ M+A + Q ++AV LF E
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 82 IVS--------WNGMVSG----------------------FVKNGMV---------AEAR 102
+V NG G +V N ++ A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDS 158
++F + +N VSW +++ GY G +A +F V V+++ LG +
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 159 RVEDARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
++ ++ + K V ++I Y + G ++ A+++F+EM +V +W ++S
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 215 GYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM------- 263
GY+ + A ++ ++M +R N +++ +L G +++G + + E F++M
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKM-RERDDGTWSAMI 306
P C M+ G G +D+A + E + E W AM+
Sbjct: 584 PCLEHYTC--MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
S I YA+ G I+ A+ VF+E I +SWNA+++ Y QA+ + + +
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETI--DVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 80 K----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRN------VVSWTSMVRGYVQEGNV 129
+ N +++ G++SG G++ + + F++M +R+ + +T MVR + G +
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM-IRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 130 EEAERLFWRMP-EKNVVSWTVMLGGLLKDSRVEDARK----LFDMMPVKDV--VAVTNMI 182
++A +L +P E +V+ W ML + + E AR+ + + P + V V+NM
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 183 GGYCEEGRLEEARALFDEM 201
G + + R EM
Sbjct: 663 AGAKQWANVASIRKSMKEM 681
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 312/540 (57%), Gaps = 42/540 (7%)
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERN---EVSWTAMLMGYTHSGRMREA---------- 256
+ +++ ++ RR+D+ARK+F+ + + + E W AM +GY+ +G R+A
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 257 ----SEFFDAMPVKPVVACNEMIMGFGFDGDV-------------------------DRA 287
F ++ +K V ++ +G G + D A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
+ VF+ M ER+ TW+++I V +K E LF +MQ E ++
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMI 407
G+++HA++++S+ D+ + ++L+ MY KCG++ ++ +F+ KD+ WN M+
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
Y+ +G EE +N+F M SGV PD I+F+ +LS CS +G + G +FE MK +++V
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
P +EHYAC+VD+LGRAG++ +AV+++E MP +P A +WGSLL +CR H + + E+A +
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 528 KLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFV 587
+L LEP N G YV++S++YA W++V+ +RE +K R V K G SW++V+ K +FV
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFV 590
Query: 588 GGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAY 647
G K+ L + +GYSP+ S VLHDV+EE K + + HSE+LA Y
Sbjct: 591 AGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTY 650
Query: 648 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
L+ EG+PIR+ KNLRVC DCHS +K++++VT R I++RD RFHHF DG CSCKDYW
Sbjct: 651 SLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 147/342 (42%), Gaps = 62/342 (18%)
Query: 25 ISRYARIGQIENARKVFDE-TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF--------- 74
I+ ++ +++ ARK+FD+ T T W AM Y + P A+ ++
Sbjct: 174 ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIE 233
Query: 75 ------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
+ + + V +N ++ ++++G+ +AR+V
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-VSWTVMLGGLLKDSRV--- 160
FD M RNVV+W S++ ++ V E LF +M E+ + SW + L SRV
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 161 ----EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
E ++ DV + +++ Y + G +E +R +FD M +++ +W M++ Y
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 217 ARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPV 268
A N ++ LFE M E + +++ A+L G + +G F+ M V P
Sbjct: 414 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPA 473
Query: 269 V---ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT-WSAMI 306
+ AC I+G G + A V E M + + W +++
Sbjct: 474 LEHYACLVDILGRA--GKIKEAVKVIETMPFKPSASIWGSLL 513
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 27/338 (7%)
Query: 101 ARRVFDAMPVRNVVS---WTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGG 153
AR++FD + ++++ W +M GY + G+ +A ++ M E S +V L
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 154 L--LKDSRVEDA--RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
LKD RV ++ D V ++ Y E G ++AR +FD M +RNVVTW
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERN-EVSW---TAMLMGYTHSGRMREASEFFDAM-- 263
+++S ++ RV LF M E SW T +L + + E +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 264 ----PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
P P++ N ++ +G G+V+ ++ VF+ M +D +W+ M+ Y G E +
Sbjct: 366 SKEKPDVPLL--NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF--DQDLYVASALIT 377
LF M G A + ++G + R+ ++EF L + L+
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVD 482
Query: 378 MYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG 414
+ + G + A + P K +W S++ HG
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 24/262 (9%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-VSWN 86
Y G ++ARKVFD R +WN++++ + + H+ LF E+ I SW
Sbjct: 281 YMESGLFDDARKVFDGMS--ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA 338
Query: 87 GMVSGFVKNGMVAEA-------RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+ + VA ++ + +V S++ Y + G VE + R+F M
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEAR 195
K++ SW +ML + +E+ LF+ M D + ++ G + G E
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 196 ALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKLFEVMPERNEVS-WTAMLMGYTH 249
+LF+ M V+ + +V R ++ A K+ E MP + S W ++L
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518
Query: 250 SGRMR----EASEFFDAMPVKP 267
G + A E F P P
Sbjct: 519 HGNVSVGEIAAKELFVLEPHNP 540
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/750 (32%), Positives = 372/750 (49%), Gaps = 70/750 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHI-HRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV 83
IS Y++ G A VF+ R SW+AM+A Y + A+ +F E +V
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 84 ----SWNGMV-----SGFVKNGMVA--------------------------------EAR 102
+ ++ S FV G V A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDS 158
+VFD M NVV+WT M+ +Q G EA R F M E + + + + +
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 159 RVEDARKLFDMMP----VKDV-VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ ++L V DV ++ +M +G +++ R +FD M +V++WT ++
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343
Query: 214 SGYARNRRVDV-ARKLFEVM-----PERNEVSWTAML-----MGYTHSGRMREASEFFDA 262
+GY +N + A LF M E N ++++ + G+ F
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG 403
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK-GFELEALGL 321
+ VA N +I F ++ A+ FE + E++ +++ + R FE +A L
Sbjct: 404 LASNSSVA-NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE-QAFKL 461
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
+ + ++ G Q+H+++V+ + V +ALI+MY K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 382 CGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
CG + A +FN ++V+ W SMITG+++HG L F M GV P++++++ +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
LSACS+ G V EG F SM ++++P +EHYACMVDLL RAG + DA E + MP +
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
D +VW + LGACR H +L ++A K+ +L+P Y+ LS++YA G+WE+ +R
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Query: 562 KIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHS 621
K+K R+++K G SWIEV K H F GD HP I L+RL ++ GY PD
Sbjct: 702 KMKERNLVKEGGCSWIEVGDKIHKFYVGD-TAHPNAHQIYDELDRLITEIKRCGYVPDTD 760
Query: 622 FVLHDVEEEEKTHS----LGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLI 677
VLH +EEE L HSEK+A+A+GL+ + P+RV KNLRVCGDCH+A+K I
Sbjct: 761 LVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYI 820
Query: 678 AKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
+ V+GREI++RD NRFHHFKDG CSC DYW
Sbjct: 821 STVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 35/373 (9%)
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM---PKRNVVTWTTMVSGYARNRRVD 223
FD+ P D V ++I Y + G +A +F+ M KR+VV+W+ M++ Y N R
Sbjct: 91 FDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 224 VARKLF----EVMPERNEVSWTAMLMGYTHS----------GRMREASEFFDAMPVKPVV 269
A K+F E+ N+ +TA++ ++S G + + F V
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF----ESDVCV 204
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
C+ + M + + A VF+KM E + TW+ MI + GF EA+ F M G
Sbjct: 205 GCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC---GDLV 386
+ G+Q+H+ +RS D V +L+ MY KC G +
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQH-GLGEEALNVFRDMCLSG-VPPDDISFIGVLSA 444
+ +F+R V+ W ++ITGY ++ L EA+N+F +M G V P+ +F A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 445 CSYSGKVKEGREIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
C + G+++ ++ K + + ++ + ++ ++ DA E + E +
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVAN--SVISMFVKSDRMEDAQRAFESLS-EKNL 439
Query: 504 IVWGSLL-GACRT 515
+ + + L G CR
Sbjct: 440 VSYNTFLDGTCRN 452
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 197/491 (40%), Gaps = 72/491 (14%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM---PVRNVVSWTSMVRGYVQEGNV 129
L E E + V +N ++S + K+G A+A VF+ M R+VVSW++M+ Y G
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 130 EEAERLFWRMPEKNVV----SWT----------------VMLGGLLKDSRVEDARKLFDM 169
+A ++F E +V +T V LG L+K E
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE-------- 199
Query: 170 MPVKDVVAVTNMIGGYCE-EGRLEEARALFDEMPKRNVVTWTTMV--------------- 213
DV ++I + + E E A +FD+M + NVVTWT M+
Sbjct: 200 ---SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 214 ------SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
SG+ ++ +F E +S L HS +R S D +
Sbjct: 257 FLDMVLSGFESDKF--TLSSVFSACAELENLSLGKQL----HSWAIR--SGLVDDVECSL 308
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK-GFELEALGLFARMQ 326
V +M DG VD + VF++M + +W+A+I Y + EA+ LF+ M
Sbjct: 309 V----DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 327 REG-AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
+G N G+QV + + + VA+++I+M+VK +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 386 VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
A+ F K++V +N+ + G ++ E+A + ++ + +F +LS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
+ G +++G +I S K + ++ + + G ++ A + M + I
Sbjct: 485 ANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVIS 542
Query: 506 WGSLLGACRTH 516
W S++ H
Sbjct: 543 WTSMITGFAKH 553
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQ-AHQPHQAVTLFET 76
+C+ ++ + G +++ RKVFD + SW A++ Y + + +A+ LF
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRME--DHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 77 TPEKNIVSWNGMV--SGFVKNGMVAEAR-------RVFDAMPVRNVVSWTSMVRGYVQEG 127
+ V N S F G +++ R + F N S++ +V+
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 128 NVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIG 183
+E+A+R F + EKN+VS+ L G ++ E A KL + +++ +++
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
G G + + + ++ K N ++S Y++ +D A ++F M RN +S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 240 WTAMLMGYTHSGRMREASEFFDAM---PVKP 267
WT+M+ G+ G E F+ M VKP
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN---RYPLKDVVMWNSMITG 409
G+ VHARL+ + + D + ++LI++Y K GD +A+ +F R+ +DVV W++M+
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
Y +G +A+ VF + G+ P+D + V+ ACS S V GR + E
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 470 GIEHYACMVDLLGRA-GQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
+ ++D+ + +A ++ +KM E + + W ++ C
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC 244
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 19/236 (8%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSS--WNAMVAAYFQAHQPHQAVTLFETT 77
T +S A +G I ++ + + + + NA+++ Y + A +F
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAE 133
+N++SW M++GF K+G F+ M V V++ +++ G V E
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 134 RLFWRMPEKNVVS-----WTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC-- 186
R F M E + + + M+ L + + DA + + MP + V V G C
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV 655
Query: 187 ----EEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV 238
E G+L + L E+ + + + YA + + + ++ M ERN V
Sbjct: 656 HSNTELGKLAARKIL--ELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/731 (30%), Positives = 365/731 (49%), Gaps = 59/731 (8%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE--------- 75
IS +G ++ A +FD+ R T SWN++ AAY Q ++ +F
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 76 -TTPEKNIVS---------WNGMVSGFVKN--------------------GMVAEARRVF 105
+T ++S W + G V G EA VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVE 161
MP ++++SW S++ +V +G +A L M N V++T L E
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 162 DARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
R L ++ V + + ++ Y + G + E+R + +MP+R+VV W ++ GYA
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 218 RNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
+ D A F+ M N ++ ++L G + E + A V +E
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 274 -----MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+I + GD+ ++ +F + R+ TW+AM+ G E L L ++M+
Sbjct: 483 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 542
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G +L+ + G+Q+H V+ F+ D ++ +A MY KCG++
Sbjct: 543 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 602
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+ + + WN +I+ +HG EE F +M G+ P ++F+ +L+ACS+
Sbjct: 603 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 662
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G V +G ++ + + +EP IEH C++DLLGR+G++ +A + KMPM+P+ +VW S
Sbjct: 663 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 722
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LL +C+ H LD A E L++LEP++ YVL S+M+A+ GRWEDVE VR+++ +++
Sbjct: 723 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 782
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE 628
K SW++++ K F GD HP+ I LE + L++++GY D S L D +
Sbjct: 783 KKKQACSWVKLKDKVSSFGIGDRT-HPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTD 841
Query: 629 EEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVR 688
EE+K H+L HSE+LA+AY L+ PEG +R+ KNLR+C DCHS K +++V GR I++R
Sbjct: 842 EEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLR 901
Query: 689 DANRFHHFKDG 699
D RFHHF+ G
Sbjct: 902 DQYRFHHFERG 912
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 241/559 (43%), Gaps = 74/559 (13%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----- 75
ST + Y G + +RKVF+E P R SW +++ Y +P + + +++
Sbjct: 80 STAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 137
Query: 76 ----------------------------------TTPEKNIVSWNGMVSGFVKNGMVAEA 101
+ E + N ++S G V A
Sbjct: 138 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 197
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKD 157
+FD M R+ +SW S+ Y Q G++EE+ R+F M E N + + +L L
Sbjct: 198 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 257
Query: 158 SRVEDARKLFDM---MPVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ R + + M VV V N ++ Y GR EA +F +MP +++++W +++
Sbjct: 258 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 317
Query: 214 SGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG-----YTHSGRMREASEFFDAMP 264
+ + + R A L M N V++T+ L + GR+ +
Sbjct: 318 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 377
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
++ N ++ +G G++ ++ V +M RD W+A+I Y +AL F
Sbjct: 378 YNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 325 MQREGAALNF-PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
M+ EG + N+ + G+ +HA +V + F+ D +V ++LITMY KCG
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
DL ++ +FN ++++ WN+M+ + HG GEE L + M GV D SF LS
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEH----YACMVDLLGRAGQVNDAVEIVEKMPM 499
A + ++EG+++ V+ G EH + D+ + G++ E+V+ +P
Sbjct: 557 AAAKLAVLEEGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPP 608
Query: 500 EPDAIV--WGSLLGACRTH 516
+ + W L+ A H
Sbjct: 609 SVNRSLPSWNILISALGRH 627
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 195/422 (46%), Gaps = 19/422 (4%)
Query: 108 MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL-----KDSRVED 162
MPVRN VSW +M+ G V+ G E F +M + + + ++ L+ S +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 163 ARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
++ + + DV T ++ Y G + +R +F+EMP RNVV+WT+++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 219 NRRVDVARKLFEVM-PERNEVSWTAMLMGYTHSGRMREAS-------EFFDAMPVKPVVA 270
+ +++ M E + +M + + G +++ S + + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
N +I G G+VD A +F++M ERD +W+++ Y + G E+ +F+ M+R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+N GR +H +V+ FD + V + L+ MY G V A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
+F + P KD++ WNS++ + G +AL + M SG + ++F L+AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++GR + + I A +V + G+ G+++++ ++ +MP D + W +L+
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Query: 511 GA 512
G
Sbjct: 419 GG 420
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 139/348 (39%), Gaps = 62/348 (17%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
Q +S Y +IG++ +R+V + P R +WNA++ Y + P +A+ F+T
Sbjct: 380 QIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Query: 78 PEKNIVS----------------------------------------WNGMVSGFVKNGM 97
+ + S N +++ + K G
Sbjct: 438 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 497
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGG 153
++ ++ +F+ + RN+++W +M+ G+ EE +L +M V S++ L
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Query: 154 LLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
K + +E+ ++L + VK D Y + G + E + R++ +
Sbjct: 558 AAKLAVLEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 209 WTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP 264
W ++S R+ + F M E V++ ++L +H G + + ++D +
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 265 ----VKPVVA-CNEMIMGFGFDGDVDRAKAVFEKMRER-DDGTWSAMI 306
++P + C +I G G + A+ KM + +D W +++
Sbjct: 677 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 724
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/609 (35%), Positives = 337/609 (55%), Gaps = 45/609 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAH-QPHQAVTLFETTPEKNIV 83
IS YA G++ A +VFDE P R T+S+NAM+ A + +A LF PEKN V
Sbjct: 88 ISAYAENGKMSKAWQVFDEMPV--RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPV--RNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
S+ M++GFV+ G EA ++ PV R+ V+ ++ GY++ G EA R+F M
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
K VVS + M+ G K R+ DAR LFD M ++V+ T MI GY + G E+ LF M
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 202 PK------------------RNVVTW----------------------TTMVSGYARNRR 221
+ R+ V + +++S Y++
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 222 VDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD 281
+ A+ +F VM ++ VSW +++ G ++ EA E F+ MP K +V+ +MI GF
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGK 385
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
G++ + +F M E+D+ TW+AMI + G+ EAL F +M ++ N
Sbjct: 386 GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 342 XXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
G Q+H R+V+ DL V ++L++MY KCG+ A IF+ ++V
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+N+MI+GYS +G G++AL +F + SG P+ ++F+ +LSAC + G V G + F+SM
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 462 KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL 521
K Y +EPG +HYACMVDLLGR+G ++DA ++ MP +P + VWGSLL A +TH+++DL
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 522 AEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEK 581
AE+A +KL +LEP +A PYV+LS +Y+ G+ D + + K++ + K PG SWI ++
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 582 KAHMFVGGD 590
+ H F+ GD
Sbjct: 686 EVHNFLAGD 694
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 243/543 (44%), Gaps = 89/543 (16%)
Query: 14 QVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL 73
+ +C ST A+S + I Q + F ET N+ ++ + + +A +
Sbjct: 16 NICLRCNSTLAVSNHEPITQ---KTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAI 72
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQ-EGNVEEA 132
F ++IVSW M+S + +NG +++A +VFD MPVR S+ +M+ ++ + ++ +A
Sbjct: 73 FRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKA 132
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--DVVAVTNMIGGYCEEGR 190
LF +PEKN VS+ M+ G ++ R ++A L+ PVK D VA ++ GY G+
Sbjct: 133 YELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGK 192
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHS 250
EA +F M + VV+ ++MV GY + R+ AR LF+ M ERN ++WTAM+ GY +
Sbjct: 193 WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKA 252
Query: 251 G------------------------------------RMREASE---FFDAMPVK-PVVA 270
G R RE S+ MP++ +
Sbjct: 253 GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFL 312
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK-VYERKGFELEALGLFARMQREG 329
N ++ + G + AKAVF M+ +D +W+++I + +RK EA LF +M
Sbjct: 313 GNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS-EAYELFEKMP--- 368
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+D+ + +I + G++ +
Sbjct: 369 ------------------------------------GKDMVSWTDMIKGFSGKGEISKCV 392
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F P KD + W +MI+ + +G EEAL F M V P+ +F VLSA +
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
+ EG +I + K + + +V + + G NDA +I + EP+ + + ++
Sbjct: 453 DLIEGLQIHGRV-VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNIVSYNTM 510
Query: 510 LGA 512
+
Sbjct: 511 ISG 513
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/701 (33%), Positives = 358/701 (51%), Gaps = 64/701 (9%)
Query: 63 QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRG 122
QA Q H F T + S + ++S + ++ EA +F + V++W S++R
Sbjct: 23 QAKQLHAQ---FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 123 YVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV- 175
+ + +A F M P+ NV + ++ D R ++ F + D
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 176 ----VAVTNMIGGYCEEGRLEEARALFDEMPKRNV------VTWTTMVSGYARNRRVDVA 225
A+ NM G +FDEMP+R V T + + +D
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSV 195
Query: 226 RKLFEVMPERNEVSWTAMLMGYTHSGRMREA-------------SEFFDAMPVKPV---- 268
R++FEVMP ++ VS+ ++ GY SG +A + F V P+
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 269 --VACNEMIMGF----GFDGDV----------------DRAKAVFEKMRERDDGTWSAMI 306
V + I G+ G D DV + ++ VF ++ RD +W++++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
Y + G EAL LF +M G+Q+H ++R F
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
++++ASAL+ MY KCG++ A+ IF+R + D V W ++I G++ HG G EA+++F +M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
GV P+ ++F+ VL+ACS+ G V E F SM Y + +EHYA + DLLGRAG+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 487 VNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHM 546
+ +A + KM +EP VW +LL +C H L+LAE EK+ ++ +N G YVL+ +M
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 547 YASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLER 606
YAS GRW+++ +R +++ + + K P SWIE++ K H FV GD + HP I + L+
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS-HPSMDKINEFLKA 614
Query: 607 LDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRV 666
+ + GY D S VLHDV+EE K L HSE+LA+A+G++ G IRV KN+R+
Sbjct: 615 VMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRI 674
Query: 667 CGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
C DCH AIK I+K+T REIIVRD +RFHHF G CSC DYW
Sbjct: 675 CTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 63/367 (17%)
Query: 20 TSTGAISRYARI---GQIENARKVFDETPHIHRTTSSWNAMVAA--YFQAHQPHQAVTLF 74
T ++ YA++ G + VFDE P RT++S + V A +F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQ--RTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----------------PV-------- 110
E P K++VS+N +++G+ ++GM +A R+ M P+
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 111 ---------------RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
+V +S+V Y + +E++ER+F R+ ++ +SW ++ G +
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 156 KDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPK----RNVV 207
++ R +A +LF M V VA +++I L + L + + N+
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP--- 264
+ +V Y++ + ARK+F+ M +EVSWTA++MG+ G EA F+ M
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 265 VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRE-----RDDGTWSAMIKVYERKGFELEA 318
VKP VA ++ G VD A F M + ++ ++A+ + R G EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 319 LGLFARM 325
++M
Sbjct: 500 YNFISKM 506
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 25/298 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV- 113
+++V Y ++ + + +F ++ +SWN +V+G+V+NG EA R+F M V
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 114 ---VSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKL 166
V+++S++ + ++L + N+ + ++ K ++ ARK+
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRV 222
FD M V D V+ T +I G+ G EA +LF+EM ++ N V + +++ + V
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 223 DVA-------RKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC-NEM 274
D A K++ + E + A L+G +G++ EA F M V+P + + +
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLG--RAGKLEEAYNFISKMCVEPTGSVWSTL 518
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDD---GTWSAMIKVYERKGFELEALGLFARMQREG 329
+ +++ A+ V EK+ D G + M +Y G E L RM+++G
Sbjct: 519 LSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/608 (35%), Positives = 335/608 (55%), Gaps = 23/608 (3%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
ARR+ P + + ++VRGY + + +F M K G + DS
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRK---------GFVFPDS-- 106
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
F + V++ ++ +C+ + LF TT++ Y
Sbjct: 107 --FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLF---------VGTTLIGMYGGCG 155
Query: 221 RVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGF 280
V+ ARK+F+ M + N V+W A++ + A E FD M V+ + N M+ G+
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 281 DGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
G+++ AK +F +M RDD +WS MI G E+ F +QR G + N
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD- 399
+ G+ +H + ++ + + V +ALI MY +CG++ A+ +F K
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
+V W SMI G + HG GEEA+ +F +M GV PD ISFI +L ACS++G ++EG + F
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 460 SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
MK Y +EP IEHY CMVDL GR+G++ A + + +MP+ P AIVW +LLGAC +H +
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Query: 520 DLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEV 579
+LAE ++L +L+P N+G VLLS+ YA+ G+W+DV +R+ + + + K +S +EV
Sbjct: 456 ELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Query: 580 EKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYH 639
K + F G+ + K+ E + L +AGY+P+ + L+DVEEEEK + H
Sbjct: 516 GKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKH 575
Query: 640 SEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDG 699
SEKLA+A+ L ++ +G IR++KNLR+C DCH+ +KL +KV G EI+VRD NRFH FKDG
Sbjct: 576 SEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDG 635
Query: 700 YCSCKDYW 707
CSC+DYW
Sbjct: 636 SCSCRDYW 643
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 136/257 (52%), Gaps = 19/257 (7%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHR-TTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
T I Y G +E ARKVFDE +H+ +WNA++ A F+ + A +F+ +
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDE---MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVR 201
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP 140
N SWN M++G++K G + A+R+F MP R+ VSW++M+ G G+ E+ L++R
Sbjct: 202 NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES-FLYFREL 260
Query: 141 EK-----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD---VVAVTN-MIGGYCEEGRL 191
++ N VS T +L + E + L + +V+V N +I Y G +
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 192 EEARALFDEMP-KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG 246
AR +F+ M KR +V+WT+M++G A + + + A +LF M + +S+ ++L
Sbjct: 321 PMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
Query: 247 YTHSGRMREASEFFDAM 263
+H+G + E ++F M
Sbjct: 381 CSHAGLIEEGEDYFSEM 397
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 146/361 (40%), Gaps = 89/361 (24%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNIV---------------SWNGMVSGF------ 92
+N +V Y ++ +PH +V +F K V ++ + +GF
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 93 VKNGM-------------------VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
+K+G+ V AR+VFD M N+V+W +++ + +V A
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
+F +M +N SW VML G +K +E A+++F MP +D V+ + MI G G E
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 194 ARALFDEMPKR----NVVTWTTMVSG---------------------------------- 215
+ F E+ + N V+ T ++S
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 216 -YARNRRVDVARKLFEVMPE-RNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----V 269
Y+R V +AR +FE M E R VSWT+M+ G G+ EA F+ M V +
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMR-----ERDDGTWSAMIKVYERKGFELEALGLFAR 324
+ ++ G ++ + F +M+ E + + M+ +Y R G +A +
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 325 M 325
M
Sbjct: 433 M 433
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 355 QVHARLVRSEFDQDLYVASALIT-MYVKCGD-LVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
Q+H ++ D D Y LI + D L A+ + +P D M+N+++ GYS+
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSE 82
Query: 413 HGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
++ VF +M G V PD SF V+ A ++ G ++ K+ +E +
Sbjct: 83 SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM-HCQALKHGLESHL 141
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
++ + G G V A ++ ++M +P+ + W +++ AC
Sbjct: 142 FVGTTLIGMYGGCGCVEFARKVFDEMH-QPNLVAWNAVITAC 182
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/568 (36%), Positives = 313/568 (55%), Gaps = 20/568 (3%)
Query: 155 LKDSRVED-ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF--------DEMPKRN 205
L D + D A ++ D + A+ +MI +C+ E++ + D P
Sbjct: 50 LSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNY 109
Query: 206 VVTWTTMVSGYARNRRVDVA------RKLFEVMPERNEVSWTAMLMGYTHSGRMREASEF 259
V + R R + R+ F+ P T ++ Y G + +
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQ----TGLISLYAELGCLDSCHKV 165
Query: 260 FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
F+++P V M+ GDV A+ +FE M ERD W+AMI Y + G EAL
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREAL 225
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
+F MQ EG +N D GR H+ + R++ + +A+ L+ +Y
Sbjct: 226 NVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
KCGD+ +A +F K+V W+S + G + +G GE+ L +F M GV P+ ++F+
Sbjct: 286 AKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFV 345
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM 499
VL CS G V EG+ F+SM+ ++ +EP +EHY C+VDL RAG++ DAV I+++MPM
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 500 EPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVV 559
+P A VW SLL A R + L+L +A +K+ +LE N G YVLLS++YA W++V V
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHV 465
Query: 560 REKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPD 619
R+ +K++ V K PG S +EV + H F GD + HP+ I + + + LR AGY D
Sbjct: 466 RQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS-HPKYTQIDAVWKDISRRLRLAGYKAD 524
Query: 620 HSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAK 679
+ V+ D++EEEK +L HSEK AIA+G++ + E +PIR++KNLRVCGDCH +I+K
Sbjct: 525 TTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISK 584
Query: 680 VTGREIIVRDANRFHHFKDGYCSCKDYW 707
+ REIIVRD NRFHHFKDG+CSC +W
Sbjct: 585 IFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 61/290 (21%)
Query: 22 TGAISRYARIGQIENARKVFDETP---HIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
TG IS YA +G +++ KVF+ P + RT AMV A + A LFE P
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRT-----AMVTACARCGDVVFARKLFEGMP 201
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----------------------SW 116
E++ ++WN M+SG+ + G EA VF M + V W
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRW 261
Query: 117 -----------------TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSR 159
T++V Y + G++E+A +FW M EKNV +W+ L GL +
Sbjct: 262 AHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF 321
Query: 160 VEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWT 210
E +LF +M + V +++ G G ++E + FD M + +
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYG 381
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVS-WTAMLMGYTHSGRMREASEF 259
+V YAR R++ A + + MP + + W+++L H+ RM + E
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL----HASRMYKNLEL 427
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 18/238 (7%)
Query: 38 RKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGM 97
R+ FD PH+ S A + H+ +F + P + V MV+ + G
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHK------VFNSIPCPDFVCRTAMVTACARCGD 189
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGG 153
V AR++F+ MP R+ ++W +M+ GY Q G EA +F M + V V+ +L
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 154 LLKDSRVEDAR---KLFDMMPVKDVVAV-TNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
+ ++ R + +K V + T ++ Y + G +E+A +F M ++NV TW
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 309
Query: 210 TTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
++ ++G A N + +LF +M + N V++ ++L G + G + E FD+M
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
G++S + + G + +VF+++P + V T+MV + G+V A +LF MPE++ +
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEM 201
+W M+ G + +A +F +M ++ V VA+ +++ + G L++ R +
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 202 PKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
+ V TT+V YA+ ++ A ++F M E+N +W++ L G +G +
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 258 EFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMR-----ERDDGTWSAMIKV 308
E F M V P V ++ G G VD + F+ MR E + ++ +
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 309 YERKGFELEALGLFARM 325
Y R G +A+ + +M
Sbjct: 387 YARAGRLEDAVSIIQQM 403
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 10 VCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQ 69
V M+ V CT GA+ + G+ ++ + E I T +V Y + +
Sbjct: 241 VAMISVLSACTQLGALDQ----GRWAHS---YIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQ 125
A+ +F EKN+ +W+ ++G NG + +F M N V++ S++RG
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 126 EGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD-----SRVEDARKLFDMMPVKDVVAV 178
G V+E +R F M + + + G L D R+EDA + MP+K AV
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV 411
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/676 (32%), Positives = 368/676 (54%), Gaps = 41/676 (6%)
Query: 63 QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRG 122
Q Q H L ++ N+++ N ++ + K A +VFD+MP RNVVSW++++ G
Sbjct: 24 QGGQVH--CYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSG 81
Query: 123 YVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKDSRVEDARKL--------FD 168
+V G+++ + LF M P + S + GLL + +E ++ F+
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL--NALEKGLQIHGFCLKIGFE 139
Query: 169 MMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKL 228
MM V +++ Y + GR+ EA +F + R++++W M++G+ A
Sbjct: 140 MM----VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 229 FEVMPERN------EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC--NEMIMGFGF 280
F +M E N E + T++L + +G M A + V+ C + I G
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTG-MIYAGKQIHGFLVRSGFHCPSSATITGSLV 254
Query: 281 D-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP 335
D G + A+ F++++E+ +WS++I Y ++G +EA+GLF R+Q + ++
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF 314
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY 395
G+Q+ A V+ + V ++++ MY+KCG + A+ F
Sbjct: 315 ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM 374
Query: 396 PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
LKDV+ W +ITGY +HGLG++++ +F +M + PD++ ++ VLSACS+SG +KEG
Sbjct: 375 QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 456 EIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRT 515
E+F + + ++P +EHYAC+VDLLGRAG++ +A +++ MP++P+ +W +LL CR
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 516 HMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYS 575
H ++L + + L +++ KN YV++S++Y G W + RE + + K G S
Sbjct: 495 HGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMS 554
Query: 576 WIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLR-DAGYSPDHSFVLHDVEEEEKTH 634
W+E+E++ H F G+++ HP P+I + L+ + LR + GY LHD+++E K
Sbjct: 555 WVEIEREVHFFRSGEDS-HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEE 613
Query: 635 SLGYHSEKLAIAYGLLK---VPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDAN 691
+L HSEKLAI L +G IRV KNLRVC DCH IK ++K+T +VRDA
Sbjct: 614 NLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAV 673
Query: 692 RFHHFKDGYCSCKDYW 707
RFH F+DG CSC DYW
Sbjct: 674 RFHSFEDGCCSCGDYW 689
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 67/347 (19%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-- 82
+ Y++ G+I A KVF + R+ SWNAM+A + A +A+ F E NI
Sbjct: 149 VDMYSKCGRINEAEKVFRRI--VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 83 -------------VSWNGMV------------SGF----------------VKNGMVAEA 101
S GM+ SGF VK G + A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLG---GLLKDS 158
R+ FD + + ++SW+S++ GY QEG EA LF R+ E N + L G+ D
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 159 RVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ K + VK + + +++ Y + G ++EA F EM ++V++WT ++
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 214 SGYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAM----PV 265
+GY ++ + ++F M N EV + A+L +HSG ++E E F + +
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 266 KPVV---ACNEMIMGFGFDGDVDRAKAVFEKMRERDD-GTWSAMIKV 308
KP V AC ++ G G + AK + + M + + G W ++ +
Sbjct: 447 KPRVEHYAC--VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
D G QVH L++S +L ++ LI MY KC + + A +F+ P ++VV W+++++G+
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
+G + +L++F +M G+ P++ +F L AC +++G +I K E
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI-HGFCLKIGFEMM 141
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+E +VD+ + G++N+A ++ ++ ++ I W +++
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 51 TSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV 110
TS N++V Y + +A F K+++SW +++G+ K+G+ ++ R+F M
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 111 RNV----VSWTSMVRGYVQEGNVEEAERLFWRMPEKN-----VVSWTVMLGGLLKDSRVE 161
N+ V + +++ G ++E E LF ++ E + V + ++ L + R++
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 162 DARKLFDMMPVKDVVAVTNMIGGYCE-EGRLE---EARALFDEMPKRNVVTWTTMVSGYA 217
+A+ L D MP+K V + + C G +E E + + +N + M + Y
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYG 527
Query: 218 R----NRRVDVARKLFEVMPERNE--VSWTAMLMGYTHSGRMREASEFF----DAMPVKP 267
+ N + + AR+L + + E +SW + FF D+ P+ P
Sbjct: 528 QAGYWNEQGN-ARELGNIKGLKKEAGMSWV----------EIEREVHFFRSGEDSHPLTP 576
Query: 268 VV 269
V+
Sbjct: 577 VI 578
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/612 (34%), Positives = 327/612 (53%), Gaps = 55/612 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N ++ AY + +F+ P++NI +WN +V+G K G + EA +F +MP R+
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNVV----SWTVMLG---GLLKDSRVEDARKLF 167
+W SMV G+ Q EEA F M ++ V S+ +L GL ++ L
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 168 DMMP-VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN----RRV 222
P + DV + ++ Y + G + +A+ +FDEM RNVV+W ++++ + +N +
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 223 DVARKLFEVMPERNEV----------SWTAMLMG-------------------------- 246
DV + + E E +EV S +A+ +G
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 247 YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
Y R++EA FD+MP++ V+A MI G+ A+ +F KM ER+ +W+A+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF- 365
Y + G EAL LF ++RE G Q H +++ F
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 366 -----DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
+ D++V ++LI MYVKCG + +F + +D V WN+MI G++Q+G G EAL
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
+FR+M SG PD I+ IGVLSAC ++G V+EGR F SM + V P +HY CMVDL
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY 540
LGRAG + +A ++E+MPM+PD+++WGSLL AC+ H + L + EKL ++EP N+GPY
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 541 VLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPII 600
VLLS+MYA G+WEDV VR+ ++ V K PG SWI+++ H+F+ D + HP + I
Sbjct: 599 VLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKS-HPRKKQI 657
Query: 601 MKMLERLDGLLR 612
+L+ L +R
Sbjct: 658 HSLLDILIAEMR 669
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWN--------- 404
R VHA +++S F ++++ + LI Y KCG L + +F++ P +++ WN
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 405 ----------------------SMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
SM++G++QH EEAL F M G ++ SF VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
SACS + +G ++ S+ K + + +VD+ + G VNDA + ++M + +
Sbjct: 160 SACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRN 217
Query: 503 AIVWGSLL 510
+ W SL+
Sbjct: 218 VVSWNSLI 225
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 92/306 (30%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S + YA+ +I+ AR +FD P R + +M++ Y A A +F E+
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMP--IRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVF------DAMPVR----------------------- 111
N+VSWN +++G+ +NG EA +F P
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 112 ----------------NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
++ S++ YV+ G VEE +F +M E++ VSW M+ G
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 156 KDSRVEDARKLF-DMMPVKDVVAVTNMIG--------GYCEEGR---------------- 190
++ +A +LF +M+ + MIG G+ EEGR
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 191 ---------------LEEARALFDEMPKR-NVVTWTTMVSGYARNRRVD----VARKLFE 230
LEEA+++ +EMP + + V W ++++ +R + VA KL E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 231 VMPERN 236
V P +
Sbjct: 590 VEPSNS 595
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/714 (31%), Positives = 379/714 (53%), Gaps = 46/714 (6%)
Query: 14 QVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL 73
Q R C + ++ Q+ R+ DE R+ S + A ++ P +
Sbjct: 51 QFRLLCITCDTLTTTHNFSQL--LRQCIDE-----RSISGIKTIQAHMLKSGFPAE---- 99
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
+S + +V +K G + AR+VFD M R++V+W S++ ++ +EA
Sbjct: 100 ---------ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAV 150
Query: 134 RLFWRMPEKNVVSWTVMLGGLLK---DSRVE-DARKLFDM-----MPVKDVVAVTNMIGG 184
++ M NV+ L + K D +E +A++ + + V +V + ++
Sbjct: 151 EMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDM 210
Query: 185 YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSW 240
Y + G+ EA+ + D + +++VV T ++ GY++ A K F+ M + NE ++
Sbjct: 211 YVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTY 270
Query: 241 TAMLMGYTHSGRMREAS--EFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEK 293
++L+ G +++ + + VK + + ++ + VD + VF+
Sbjct: 271 ASVLIS---CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
+ + +W+++I + G E AL F +M R+ N + G
Sbjct: 328 IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG 387
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
RQ+H + + FD+D Y S LI +Y KCG A+ +F+ DV+ N+MI Y+Q+
Sbjct: 388 RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G G EAL++F M G+ P+D++ + VL AC+ S V+EG E+F+S + K ++ +H
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDH 506
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
YACMVDLLGRAG++ +A E++ + PD ++W +LL AC+ H K+++AE K+ ++E
Sbjct: 507 YACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
P + G +L+S++YAS G+W V ++ K+K + K P SW+E+ K+ H F+ GD
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFS 625
Query: 594 HPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVP 653
HP I++ LE L +D GY D S V D+EE K SL HSEKLAIA+ + +
Sbjct: 626 HPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-N 684
Query: 654 EGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
G IR++KNLRVC DCHS IK++++V REII RD+ RFHHF+DG CSC DYW
Sbjct: 685 VGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/737 (31%), Positives = 362/737 (49%), Gaps = 62/737 (8%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE--------- 75
++ + R G + +A VF + R SWN +V Y + +A+ L+
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 76 ----TTP---------------------------EKNIVSWNGMVSGFVKNGMVAEARRV 104
T P E +I N +++ +VK G V AR +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKDS 158
FD MP R+++SW +M+ GY + G E LF+ M P+ ++ + LL D
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 313
Query: 159 RVEDARKLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
R+ + + D+ ++ Y G EA LF M ++++V+WTTM+SGY
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 217 ARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEF----FDAMPVKPV 268
N D A + +M + +E++ A+L G + E A + V
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+ N +I + +D+A +F + ++ +W+++I EAL +F R +
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKM 492
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
N G+++HA ++R+ D ++ +AL+ MYV+CG + A
Sbjct: 493 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
FN KDV WN ++TGYS+ G G + +F M S V PD+I+FI +L CS S
Sbjct: 553 WSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
V++G F M+ Y V P ++HYAC+VDLLGRAG++ +A + ++KMP+ PD VWG+
Sbjct: 612 QMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LL ACR H K+DL E++ + + +L+ K+ G Y+LL ++YA G+W +V VR +K +
Sbjct: 671 LLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE 628
G SW+EV+ K H F+ D+ HP+ I +LE + + G + D
Sbjct: 731 TVDAGCSWVEVKGKVHAFL-SDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789
Query: 629 EEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVR 688
E + HSE+ AIA+GL+ GMPI V KNL +C +CH +K I+K REI VR
Sbjct: 790 EISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVR 849
Query: 689 DANRFHHFKDGYCSCKD 705
DA FHHFKDG CSC D
Sbjct: 850 DAEHFHHFKDGECSCGD 866
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 202/449 (44%), Gaps = 35/449 (7%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-----P 140
N ++ FV+ G + +A VF M RN+ SW +V GY ++G +EA L+ RM
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 141 EKNVVSWTVML---GGLL-----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLE 192
+ +V ++ +L GG+ K+ V R +++ D+ V +I Y + G ++
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL----DIDVVNALITMYVKCGDVK 248
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PE---RNEVSWTAM 243
AR LFD MP+R++++W M+SGY N +LF M P+ V
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWS 303
L+G GR A V + CN + + G A+ +F +M +D +W+
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVD-ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
MI YE +A+ + M ++ + D G ++H +++
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
+ VA+ LI MY KC + +A IF+ P K+V+ W S+I G + EAL
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA--CMVDLL 481
R M ++ + P+ I+ L+AC+ G + G+EI + + G++ + ++D+
Sbjct: 488 RQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHV---LRTGVGLDDFLPNALLDMY 543
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
R G++N A + + D W LL
Sbjct: 544 VRCGRMNTAWS--QFNSQKKDVTSWNILL 570
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 42/338 (12%)
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR-KLFEVMPERNEVSWTA 242
G C G+LEEA L + M + V A + V VA +L E + E S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRV----------AVDEDVFVALVRLCEWKRAQEEGSKVY 117
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
+ + S E F AM V+ G++ A VF KM ER+ +W
Sbjct: 118 SIALSSMSSLGVELGNAFLAMFVRF--------------GNLVDAWYVFGKMSERNLFSW 163
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAA----LNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+ ++ Y ++G+ EA+ L+ RM G FP G++VH
Sbjct: 164 NVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA---RGKEVHV 220
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
+VR ++ D+ V +ALITMYVKCGD+ A+ +F+R P +D++ WN+MI+GY ++G+ E
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG--IEHYAC 476
L +F M V PD ++ V+SAC G + GR+I Y + G ++ C
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH-----AYVITTGFAVDISVC 335
Query: 477 --MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+ + AG +A ++ +M D + W +++
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISG 372
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/461 (40%), Positives = 284/461 (61%)
Query: 247 YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
Y + G + A F M + VV+ M+ G+ G V+ A+ +F++M R+ TWS MI
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
Y + +A+ LF M+REG N + G + + +V+S
Sbjct: 222 NGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT 281
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
+L + +AL+ M+ +CGD+ +A +F P D + W+S+I G + HG +A++ F M
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
G P D++F VLSACS+ G V++G EI+E+MK + +EP +EHY C+VD+LGRAG+
Sbjct: 342 ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGK 401
Query: 487 VNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHM 546
+ +A + KM ++P+A + G+LLGAC+ + ++AE L +++P+++G YVLLS++
Sbjct: 402 LAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNI 461
Query: 547 YASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLER 606
YA G+W+ +E +R+ +K + V K PG+S IE++ K + F GD+ HPE I + E
Sbjct: 462 YACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEE 521
Query: 607 LDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRV 666
+ G +R GY + DV+EEEK S+ HSEKLAIAYG++K G IR++KNLRV
Sbjct: 522 ILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRV 581
Query: 667 CGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
C DCH+ KLI++V GRE+IVRD NRFHHF++G CSC+DYW
Sbjct: 582 CEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 35/354 (9%)
Query: 1 MGYGYSTL------RVCMVQVRFQCTSTGA--ISRYARIGQIENARKVFDET--PHIHRT 50
+GY Y + + + +C STGA + Q+ +R D P + +
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 51 TSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV 110
+S ++ Q H + F + ++ N +V + G +A A R+F M
Sbjct: 127 SSEMECVLVG----EQTHSQIVRFGF--QNDVYVENSLVHMYANCGFIAAAGRIFGQMGF 180
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM 170
R+VVSWTSMV GY + G VE A +F MP +N+ +W++M+ G K++ E A LF+ M
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 171 PVKDVVA----VTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRV 222
+ VVA + ++I G LE ++ + K N++ T +V + R +
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 223 DVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVVACNEMIMGF 278
+ A +FE +PE + +SW++++ G G +A +F M + V ++
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 279 GFDGDVDRAKAVFEKMRERDDGT------WSAMIKVYERKGFELEALGLFARMQ 326
G V++ ++E M+ +D G + ++ + R G EA +M
Sbjct: 361 SHGGLVEKGLEIYENMK-KDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 413
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA---ALNFPXXXXXXXX 343
A +F +++ + ++ +I+ + +A G + +M + + FP
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
G Q H+++VR F D+YV ++L+ MY CG + A IF + +DVV W
Sbjct: 130 MECVLV---GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 404 NSMITGYSQHGLGEEALNVFRDM-------------------CL------------SGVP 432
SM+ GY + G+ E A +F +M C GV
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 433 PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVE 492
++ + V+S+C++ G ++ G +E + K + + +VD+ R G + A+
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYV-VKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 493 IVEKMPMEPDAIVWGSLLGACRTH 516
+ E +P E D++ W S++ H
Sbjct: 306 VFEGLP-ETDSLSWSSIIKGLAVH 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 19/260 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+ YA G I A ++F + R SW +MVA Y + A +F+ P +N+ +
Sbjct: 159 VHMYANCGFIAAAGRIFGQMGF--RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT 216
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVRNVVS----WTSMVRGYVQEGNVEEAERLFWRMP 140
W+ M++G+ KN +A +F+ M VV+ S++ G +E ER + +
Sbjct: 217 WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 141 EK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARA 196
+ N++ T ++ + +E A +F+ +P D ++ +++I G G +A
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMH 336
Query: 197 LFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----WTAMLMGY 247
F +M VT+T ++S + V+ +++E M + + + + ++
Sbjct: 337 YFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDML 396
Query: 248 THSGRMREASEFFDAMPVKP 267
+G++ EA F M VKP
Sbjct: 397 GRAGKLAEAENFILKMHVKP 416
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/573 (36%), Positives = 316/573 (55%), Gaps = 57/573 (9%)
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNR--RVDVARKLF-EVMP----ERNEVSWTAM 243
L+ A +F++MP+RN +W T++ G++ + + +A LF E+M E N ++ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 244 LMGYTHSGRMREA--------------SEFFDAMPVKPVVAC------------------ 271
L +G+++E EF + V+ V C
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 272 -----------------NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGF 314
N MI G+ GD A+ +F+KMR+R +W+ MI Y GF
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 315 ELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASA 374
+A+ +F M++ N+ + G +H S D + SA
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 375 LITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
LI MY KCG + +A +F R P ++V+ W++MI G++ HG +A++ F M +GV P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
D+++I +L+ACS+ G V+EGR F M +EP IEHY CMVDLLGR+G +++A E +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 495 EKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
MP++PD ++W +LLGACR +++ + L + P ++G YV LS+MYAS+G W
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 555 DVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDA 614
+V +R ++K + + K PG S I+++ H FV D++ HP+ I ML + LR A
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDS-HPKAKEINSMLVEISDKLRLA 553
Query: 615 GYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAI 674
GY P + VL ++EEE+K + L YHSEK+A A+GL+ G PIR++KNLR+C DCHS+I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 675 KLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
KLI+KV R+I VRD RFHHF+DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
IV WN M+ G+++ G AR +FD M R+VVSW +M+ GY G ++A +F M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 142 ----KNVVSWTVMLGGLLKDSRVEDARKLF-----DMMPVKDVVAVTNMIGGYCEEGRLE 192
N V+ +L + + +E L + + DV+ + +I Y + G +E
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG-SALIDMYSKCGIIE 326
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRR----VDVARKLFEVMPERNEVSWTAMLMGYT 248
+A +F+ +P+ NV+TW+ M++G+A + + +D K+ + ++V++ +L +
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 249 HSGRMREASEFFDAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER-DDG 300
H G + E +F M P C M+ G G +D A+ M + DD
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGC--MVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 301 TWSAMIKVYERKG 313
W A++ +G
Sbjct: 445 IWKALLGACRMQG 457
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 37/297 (12%)
Query: 34 IENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQ--AVTLF-----ETTPEKNIVSWN 86
++ A K+F++ P R SWN ++ + ++ + A+TLF + E N ++
Sbjct: 75 LDYAHKIFNQMPQ--RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 87 GMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEAERLFW---- 137
++ K G + E +++ + ++ + +++VR YV G +++A LF+
Sbjct: 133 SVLKACAKTGKIQEGKQIH-GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 138 ----------RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCE 187
R + +V W VM+ G ++ + AR LFD M + VV+ MI GY
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 188 EGRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVS 239
G ++A +F EM K N VT +++ +R +++ L + ++V
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRE 296
+A++ Y+ G + +A F+ +P + V+ + MI GF G A F KMR+
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 64/289 (22%)
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFE--LEALGLFARMQR----EGAALNFPX 336
D+D A +F +M +R+ +W+ +I+ + + L A+ LF M E FP
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP- 132
Query: 337 XXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC-------------- 382
G+Q+H ++ F D +V S L+ MYV C
Sbjct: 133 --SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 383 -------------------------------GDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
GD A+ +F++ + VV WN+MI+GYS
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+G ++A+ VFR+M + P+ ++ + VL A S G ++ G + Y + GI
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH-----LYAEDSGI 305
Query: 472 E----HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+ ++D+ + G + A+ + E++P E + I W +++ H
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 174/444 (39%), Gaps = 105/444 (23%)
Query: 128 NVEEAERLFWRMPEKNVVSWTVMLGG------------------LLKDSRVEDARKLFDM 169
+++ A ++F +MP++N SW ++ G ++ D VE R F
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 170 -------------------MPVK-----DVVAVTNMIGGYCEEGRLEEARALF------- 198
+ +K D ++N++ Y G +++AR LF
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 199 -----DEMPKRN--VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSG 251
+ KR+ +V W M+ GY R AR LF+ M +R+ VSW M+ GY+ +G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 252 RMREASEFFDAM-------------PVKPVVA--------------------------CN 272
++A E F M V P ++ +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+I + G +++A VFE++ + TWSAMI + G +A+ F +M++ G
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE-FDQDLYVASALITMYVKCGDLVRAKWI 391
+ + GR+ +++V + + + ++ + + G L A+
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 392 FNRYPLK-DVVMWNSMITGYSQHG---LGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
P+K D V+W +++ G +G+ N+ DM VP D +++ + + +
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM----VPHDSGAYVALSNMYAS 489
Query: 448 SGKVKEGREIFESMKCK-YQVEPG 470
G E E+ MK K + +PG
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPG 513
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 44/320 (13%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-- 82
I Y R+G + AR +FD+ R+ SWN M++ Y AV +F + +I
Sbjct: 215 IDGYMRLGDCKAARMLFDKMR--QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 83 --VSWNGMVSGFVKNGM--VAEARRVF--DAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
V+ ++ + G + E ++ D+ + V ++++ Y + G +E+A +F
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLE 192
R+P +NV++W+ M+ G + DA F M V VA N++ G +E
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
E R F +M V G + P L+G SG
Sbjct: 393 EGRRYFSQM---------VSVDG---------------LEPRIEHYGCMVDLLG--RSGL 426
Query: 253 MREASEFFDAMPVKPVVACNEMIMGFG-FDGDVD---RAKAVFEKMRERDDGTWSAMIKV 308
+ EA EF MP+KP + ++G G+V+ R + M D G + A+ +
Sbjct: 427 LDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNM 486
Query: 309 YERKGFELEALGLFARMQRE 328
Y +G E + RM+ +
Sbjct: 487 YASQGNWSEVSEMRLRMKEK 506
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 25/231 (10%)
Query: 355 QVHARLVRSEFDQDLYVASALI----TMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
Q+HA ++S +D A+ ++ T + DL A IFN+ P ++ WN++I G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 411 SQHGLGEE--ALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
S+ + A+ +F +M V P+ +F VL AC+ +GK++EG++I + KY
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI-HGLALKYGF 159
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV-------------WGSLLGACR 514
+ +V + G + DA + K +E D +V W ++
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG-- 217
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWED-VEVVREKIK 564
+M+L + A ++ ++ + + Y+ G ++D VEV RE K
Sbjct: 218 -YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 286/474 (60%), Gaps = 8/474 (1%)
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
T++L Y+ G +R A FD K + A N ++ + G +D A+ +F++M ER+
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 301 TWSAMIKVYERKGFELEALGLFARMQ--REGAALNFPXXXXXXXXXXX---XXXXDHGRQ 355
+WS +I Y G EAL LF MQ + A P + G+
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY-PLKDVVMWNSMITGYSQHG 414
VHA + + + D+ + +ALI MY KCG L RAK +FN KDV +++MI + +G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 415 LGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
L +E +F +M S + P+ ++F+G+L AC + G + EG+ F+ M ++ + P I+H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
Y CMVDL GR+G + +A + MPMEPD ++WGSLL R + E A+++L +L+
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 400
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
P N+G YVLLS++YA GRW +V+ +R +++ + + K+PG S++EVE H FV GD +
Sbjct: 401 PMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDES- 459
Query: 594 HPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVP 653
E I ML+ + LR+AGY D VL D+ E++K +L YHSEKLAIA+ L+K
Sbjct: 460 QQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTR 519
Query: 654 EGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
G P+R++KNLR+CGDCH +K+I+K+ REI+VRD NRFHHF+DG CSC+D+W
Sbjct: 520 PGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 159/336 (47%), Gaps = 30/336 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T ++ Y+ G + +A++VFD++ + +WN++V AY +A A LF+ PE+N
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGS--KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN 158
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPV---------RNVVSWTSMVRGYVQEGNVEEA 132
++SW+ +++G+V G EA +F M + N + ++++ + G +E+
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 133 ERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMM-PVKDVVAVTNMIGGYCE 187
+ + + E ++V T ++ K +E A+++F+ + KDV A + MI
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 188 EGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS--- 239
G +E LF EM N VT+ ++ ++ + F++M E ++
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSI 338
Query: 240 --WTAMLMGYTHSGRMREASEFFDAMPVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRE 296
+ M+ Y SG ++EA F +MP++P V+ ++ G GD+ + +++ E
Sbjct: 339 QHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIE 398
Query: 297 RD---DGTWSAMIKVYERKGFELEALGLFARMQREG 329
D G + + VY + G +E + M+ +G
Sbjct: 399 LDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM 232
KD T+++ Y G L A+ +FD+ +++ W ++V+ YA+ +D ARKLF+ M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVVACNEMIMG----------- 277
PERN +SW+ ++ GY G+ +EA + F M P + V NE M
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 278 -----------------------------FGFDGDVDRAKAVFEKM-RERDDGTWSAMIK 307
+ G ++RAK VF + ++D +SAMI
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 308 VYERKGFELEALGLFARM-QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF- 365
G E LF+ M + N + G+ + +++ EF
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS-YFKMMIEEFG 333
Query: 366 -DQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITG 409
+ ++ +Y + G + A+ P++ DV++W S+++G
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G++ HA+++ D+D +V ++L+ MY CGDL A+ +F+ KD+ WNS++ Y++
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 413 HGLGE-------------------------------EALNVFRDMCL-----SGVPPDDI 436
GL + EAL++FR+M L + V P++
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
+ VLSAC G +++G+ + + KY VE I ++D+ + G + A +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYID-KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 497 MPMEPDAIVWGSLL 510
+ + D + +++
Sbjct: 260 LGSKKDVKAYSAMI 273
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 312/541 (57%), Gaps = 19/541 (3%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRN--VVTWTTMVSGYARNRRVDVARKLFEVMPER 235
+T +I YC+ G + +AR +F+E P+ + V + ++SGY N +V A +F M E
Sbjct: 91 LTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET 150
Query: 236 NEVSWTAMLMG---------YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDR 286
+ ++G Y GR + + V N I + G V+
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE-VAVLNSFITMYMKCGSVEA 209
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
+ +F++M + TW+A+I Y + G + L L+ +M+ G +
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
G +V + + F +++V++A I+MY +CG+L +A+ +F+ P+K +V W +M
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
I Y HG+GE L +F DM G+ PD F+ VLSACS+SG +G E+F +MK +Y+
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
+EPG EHY+C+VDLLGRAG++++A+E +E MP+EPD VWG+LLGAC+ H +D+AE+A
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMF 586
K+ + EP N G YVL+S++Y+ E + +R ++ R+ K PGYS++E + + H+F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 587 VGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIA 646
+ GD + H + + +ML+ L+ + + + D EE + + HSE+LAIA
Sbjct: 510 LAGDRS-HEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSSTTREHSERLAIA 562
Query: 647 YGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDY 706
+G+L G I V+KNLRVC DCH +K ++K+ R+ +VRDA+RFH+FKDG CSCKDY
Sbjct: 563 FGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDY 622
Query: 707 W 707
W
Sbjct: 623 W 623
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 141/344 (40%), Gaps = 61/344 (17%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------ 75
T IS Y + G + +ARKVF+E P + + +NA+++ Y + A +F
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 76 ---------------TTPE------------------KNIVSWNGMVSGFVKNGMVAEAR 102
T PE + N ++ ++K G V R
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
R+FD MPV+ +++W +++ GY Q G + L+ +M V L +L
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 163 ARKLFDMMP--------VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
A+K+ + V +V I Y G L +ARA+FD MP +++V+WT M+
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 215 GYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM------- 263
Y + ++ LF+ M +R + + +L +HSG + E F AM
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
P +C ++ G G +D A E M E D W A++
Sbjct: 392 PGPEHYSC--LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 58/316 (18%)
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGA---ALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
W+ ++ + E++ L+ M R G+ A +FP G+Q+H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVS---GQQLHC 77
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD--VVMWNSMITGYSQHGLG 416
+ + + + +V +ALI+MY KCG + A+ +F P V +N++I+GY+ +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSY----------------------------- 447
+A +FR M +GV D ++ +G++ C+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 448 ------SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME- 500
G V+ GR +F+ M K G+ + ++ + G D +E+ E+M
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVK-----GLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 501 --PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSH----MYASKGRWE 554
PD S+L +C H+ V KL +E P V +S+ MYA G
Sbjct: 253 VCPDPFTLVSVLSSC-AHLGAKKIGHEVGKL--VESNGFVPNVFVSNASISMYARCGNLA 309
Query: 555 DVEVVREKIKTRSVIK 570
V + + +S++
Sbjct: 310 KARAVFDIMPVKSLVS 325
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/649 (33%), Positives = 341/649 (52%), Gaps = 40/649 (6%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------ 139
N ++S ++K G +A +VF+ MP R++VSW SM+ GY+ G+ + LF M
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 140 PEKNVVSWTVMLGGLL-----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
P++ S LG K + + + DV+ +T+++ Y + G + A
Sbjct: 229 PDR--FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----------WTAM 243
+F+ M +RN+V W M+ YARN RV A F+ M E+N + +A+
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 244 LMGYT-HSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
L G T H MR F M ++ +I +G G + A+ +F++M E++ +W
Sbjct: 347 LEGRTIHGYAMRRG--FLPHMVLETA-----LIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+++I Y + G AL LF + + GR++HA +V+
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
S + + + ++L+ MY CGDL A+ FN LKDVV WNS+I Y+ HG G ++ +
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLG 482
F +M S V P+ +F +L+ACS SG V EG E FESMK +Y ++PGIEHY CM+DL+G
Sbjct: 520 FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 483 RAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 542
R G + A +E+MP P A +WGSLL A R H + +AE A E++ ++E N G YVL
Sbjct: 580 RTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVL 639
Query: 543 LSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMK 602
L +MYA GRWEDV ++ ++++ + + S +E + K+H+F GD + K
Sbjct: 640 LLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRS----HVATNK 695
Query: 603 MLERLDGLLRDAGYSPDHSFVLHDVEEE----EKTHSLGYHSEKLAIAYGLLKVPEGMPI 658
+ E LD + R G + + + E +++S HS +LA +GL+ G +
Sbjct: 696 IYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRV 755
Query: 659 RVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
V N R+C CH ++ +++T REI+V D+ FHHF +G CSC +YW
Sbjct: 756 TVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 209/463 (45%), Gaps = 28/463 (6%)
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
++ T + N + + GF + ++ +A ++FD M + W M++G+ G EA
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKD----SRVEDARKLFDMMP----VKDVVAVTNMIGGY 185
+ + RM V + T ++K S +E+ +K+ M+ V DV ++I Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 186 CEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PERNEVS 239
+ G +A +F+EMP+R++V+W +M+SGY + LF+ M P+R S
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR--FS 233
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKM 294
+ L +H + E + + M+M D G+V A+ +F M
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
+R+ W+ MI Y R G +A F +M + GR
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG---LQPDVITSINLLPASAILEGR 350
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
+H +R F + + +ALI MY +CG L A+ IF+R K+V+ WNS+I Y Q+G
Sbjct: 351 TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNG 410
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM-KCKYQVEPGIEH 473
AL +F+++ S + PD + +L A + S + EGREI + K +Y I +
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+V + G + DA + + ++ D + W S++ A H
Sbjct: 471 --SLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH 510
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 136/269 (50%), Gaps = 6/269 (2%)
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
A + GF ++ A +F++M + D W+ MIK + G +EA+ ++RM G
Sbjct: 66 ALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ + G+++HA +++ F D+YV ++LI++Y+K G A+
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F P +D+V WNSMI+GY G G +L +F++M G PD S + L ACS+
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 450 KVKEGREIFESMKCKYQVEPG-IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
K G+EI + ++E G + ++D+ + G+V+ A I M ++ + + W
Sbjct: 246 SPKMGKEI-HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNV 303
Query: 509 LLGACRTHMKLDLAEVAVEKLAQ---LEP 534
++G + ++ A + +K+++ L+P
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 191/464 (41%), Gaps = 65/464 (14%)
Query: 8 LRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP 67
+++ V + C S IS Y ++G +A KVF+E P R SWN+M++ Y
Sbjct: 157 IKLGFVSDVYVCNSL--ISLYMKLGCAWDAEKVFEEMP--ERDIVSWNSMISGYLALGDG 212
Query: 68 HQAVTLFET------TPEK-NIVSWNGMVSGFV--KNGMVAEARRVFDAMPVRNVVSWTS 118
++ LF+ P++ + +S G S K G V + +V+ TS
Sbjct: 213 FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTS 272
Query: 119 MVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----- 173
++ Y + G V AER+F M ++N+V+W VM+G ++ RV DA F M +
Sbjct: 273 ILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 174 DVVAVTN-------------------------------MIGGYCEEGRLEEARALFDEMP 202
DV+ N +I Y E G+L+ A +FD M
Sbjct: 333 DVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLFE------VMPERNEVSWTAMLMGYTHSGRMREA 256
++NV++W ++++ Y +N + A +LF+ ++P+ ++ ++L Y S + E
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA--SILPAYAESLSLSEG 450
Query: 257 SEFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYER 311
E A VK + N ++ + GD++ A+ F + +D +W+++I Y
Sbjct: 451 RE-IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 312 KGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE-FDQDLY 370
GF ++ LF+ M N D G + + R D +
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVV-MWNSMITGYSQH 413
++ + + G+ AK P +W S++ H
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 25/290 (8%)
Query: 45 PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
PH+ T A++ Y + Q A +F+ EKN++SWN +++ +V+NG A +
Sbjct: 363 PHMVLET----ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 105 F----DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK---- 156
F D+ V + + S++ Y + ++ E + + + S T++L L+
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 157 DSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
+EDARK F+ + +KDVV+ ++I Y G + LF EM N T+ ++
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKP 267
++ + + VD + FE M + + ML +G A F + MP P
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598
Query: 268 VVAC-NEMIMGFGFDGDVDRAKAVFE---KMRERDDGTWSAMIKVYERKG 313
++ D+ A+ E KM + G + ++ +Y G
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/550 (36%), Positives = 312/550 (56%), Gaps = 17/550 (3%)
Query: 172 VKDVVAVTNMIGGYCEEGRLEE----ARALFDEMPKRNVVTWTTMVSGYAR-NRRVDVAR 226
++DV V +I +C E E AR LF+ M + ++V + +M GY+R ++V
Sbjct: 57 IEDVSFVAKLIN-FCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFS 115
Query: 227 KLFEVMPE---RNEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNEMIMGF 278
E++ + + ++ ++L + + E + + +K V C +I +
Sbjct: 116 LFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL-HCLSMKLGLDDNVYVCPTLINMY 174
Query: 279 GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
DVD A+ VF+++ E ++AMI Y R+ EAL LF MQ + N
Sbjct: 175 TECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
D G+ +H + F + + V +ALI M+ KCG L A IF + K
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D W++MI Y+ HG E+++ +F M V PD+I+F+G+L+ACS++G+V+EGR+ F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMK 518
M K+ + P I+HY MVDLL RAG + DA E ++K+P+ P ++W LL AC +H
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 519 LDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
LDLAE E++ +L+ + G YV+LS++YA +WE V+ +R+ +K R +K+PG S IE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 579 VEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLH-DVEEEEKTHSLG 637
V H F GD + + L+ + L+ +GY PD S V+H ++ ++EK +L
Sbjct: 475 VNNVVHEFFSGD-GVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLR 533
Query: 638 YHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFK 697
YHSEKLAI +GLL P G IRV+KNLRVC DCH+A KLI+ + GR++++RD RFHHF+
Sbjct: 534 YHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593
Query: 698 DGYCSCKDYW 707
DG CSC D+W
Sbjct: 594 DGKCSCGDFW 603
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 26/336 (7%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
AR +F+AM ++V + SM RGY + N E LF + E ++ LLK V
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 161 ----EDARKLFDM---MPVKDVVAVT-NMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
E+ R+L + + + D V V +I Y E ++ AR +FD + + VV + M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRM-------REASEFFD 261
++GYAR R + A LF M + NE++ ++L G + + A +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 262 AMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGL 321
VK A +M F G +D A ++FEKMR +D WSAMI Y G +++ +
Sbjct: 262 CKYVKVNTALIDM---FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD--QDLYVASALITMY 379
F RM+ E + + GR+ +++V S+F + +++ +
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV-SKFGIVPSIKHYGSMVDLL 377
Query: 380 VKCGDLVRAKWIFNRYPLKDVVM-WNSMITGYSQHG 414
+ G+L A ++ P+ M W ++ S H
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 21/277 (7%)
Query: 56 AMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR---- 111
++ Y + A +F+ E +V +N M++G+ + EA +F M +
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW----TVMLGGLLKDSRVEDARKLF 167
N ++ S++ G+++ + + + + + T ++ K ++DA +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVD 223
+ M KD A + MI Y G+ E++ +F+ M NV +T+ +++ + RV+
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 224 VARKLFEVMPERNEV-----SWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM-G 277
RK F M + + + +M+ + +G + +A EF D +P+ P +++
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 278 FGFDGDVDRAKAVFEKMRERDD---GTWSAMIKVYER 311
++D A+ V E++ E DD G + + +Y R
Sbjct: 409 CSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 51/262 (19%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK---- 80
I+ Y +++AR VFD + +NAM+ Y + ++P++A++LF K
Sbjct: 171 INMYTECEDVDSARCVFDRI--VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 81 ------------------NIVSW-----------------NGMVSGFVKNGMVAEARRVF 105
++ W ++ F K G + +A +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK----DSRVE 161
+ M ++ +W++M+ Y G E++ +F RM +NV + GLL RVE
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 162 DARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVSG 215
+ RK F M K + +M+ G LE+A D++P + W +++
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 216 YARNRRVDVARKLFEVMPERNE 237
+ + +D+A K+ E + E ++
Sbjct: 409 CSSHNNLDLAEKVSERIFELDD 430
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T I +A+ G +++A +F++ + + T +W+AM+ AY + +++ +FE +
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRY--KDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 81 NI----VSWNGMVSGFVKNGMVAEARRVFDAMP-----VRNVVSWTSMVRGYVQEGNVEE 131
N+ +++ G+++ G V E R+ F M V ++ + SMV + GN+E+
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 132 AERLFWRMP-EKNVVSWTVMLGGLLKDSRVEDARKL 166
A ++P + W ++L + ++ A K+
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 110/262 (41%), Gaps = 23/262 (8%)
Query: 56 AMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV-- 113
A++ + + AV++FE K+ +W+ M+ + +G ++ +F+ M NV
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 114 --VSWTSMVRGYVQEGNVEEAERLFWRMPEK-----NVVSWTVMLGGLLKDSRVEDARKL 166
+++ ++ G VEE + F +M K ++ + M+ L + +EDA +
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 167 FDMMPVKDVVAVTNMIGGYCEE-GRLEEARALFD---EMPKRNVVTWTTMVSGYARNRRV 222
D +P+ + ++ C L+ A + + E+ + + + + YARN++
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 449
Query: 223 DVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV-----ACNEMIMG 277
+ L +VM +R V + G + EFF VK A +EM+
Sbjct: 450 EYVDSLRKVMKDRKAVK----VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKE 505
Query: 278 FGFDGDV-DRAKAVFEKMRERD 298
G V D + V M +++
Sbjct: 506 LKLSGYVPDTSMVVHANMNDQE 527
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 337/619 (54%), Gaps = 21/619 (3%)
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
R V + +VS +S+++ + + + +F E+N ++ GL +++R E
Sbjct: 55 RGVLSSRVAAQLVSCSSLLK------SPDYSLSIFRNSEERNPFVLNALIRGLTENARFE 108
Query: 162 DARKLFDMMPVKDV---------VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
+ + F +M V V +N G+ GR A L + + + V ++
Sbjct: 109 SSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVR-LSL 167
Query: 213 VSGYARNRRVDVARKLFEVMPERNE----VSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
V YA+ ++ A ++FE P+R + + W ++ GY + M A+ F +MP +
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+ + +I G+ G+++RAK +FE M E++ +W+ +I + + G A+ + M +
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G N G ++H ++ + D + +AL+ MY KCG+L A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+F+ KD++ W +MI G++ HG +A+ FR M SG PD++ F+ VL+AC S
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
+V G F+SM+ Y +EP ++HY +VDLLGRAG++N+A E+VE MP+ PD W +
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
L AC+ H AE + L +L+P+ G Y+ L +ASKG +DVE R ++ R
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIK 527
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE 628
+ G+S+IE++ + + F GD + Q I +K L+ + L GY+P + +HD+E
Sbjct: 528 ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK-LDEIISLAIQKGYNPGADWSIHDIE 586
Query: 629 EEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVR 688
EEEK + G HSEKLA+ G L+ G IR++KNLR+CGDCHS +K ++K++ R+I++R
Sbjct: 587 EEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLR 646
Query: 689 DANRFHHFKDGYCSCKDYW 707
DA +FHHFKDG CSC DYW
Sbjct: 647 DARQFHHFKDGRCSCGDYW 665
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSS--WNAMVAAYFQAHQPHQAVTLFETTPEKNI 82
+ YA+ GQ+++A +VF+E+P + S WN ++ Y +A H A TLF + PE+N
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK 142
SW+ ++ G+V +G + A+++F+ MP +NVVSWT+++ G+ Q G+ E A ++ M EK
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 143 N----------VVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLE 192
V+S G L R+ + D D T ++ Y + G L+
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGY--ILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYT 248
A +F M +++++WT M+ G+A + R A + F M + +EV + A+L
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 249 HSGRMREASEFFDAM----PVKPVVACNEMIMG-FGFDGDVDRAKAVFEKMRERDD-GTW 302
+S + FFD+M ++P + +++ G G ++ A + E M D TW
Sbjct: 406 NSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Query: 303 SAMIK 307
+A+ +
Sbjct: 466 AALYR 470
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 304/541 (56%), Gaps = 13/541 (2%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR----RVDVARKLFEVMP 233
+T ++ G + AR +FDEM K + W T+ GY RN+ + + +K+ ++
Sbjct: 46 LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGV 105
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC-----NEMIMGFGFDGDVDRAK 288
+E ++ ++ + G A VK C E++M + G++ A+
Sbjct: 106 RPDEFTYPFVVKAISQLGDF-SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAE 164
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
+FE M+ +D W+A + V + G AL F +M + +
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
+ G +++ R + E D ++ V +A + M++KCG+ A+ +F ++VV W++MI
Sbjct: 225 SLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIV 284
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM--KCKYQ 466
GY+ +G EAL +F M G+ P+ ++F+GVLSACS++G V EG+ F M
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN 344
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
+EP EHYACMVDLLGR+G + +A E ++KMP+EPD +WG+LLGAC H + L +
Sbjct: 345 LEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVA 404
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMF 586
+ L + P +VLLS++YA+ G+W+ V+ VR K++ K+ YS +E E K H F
Sbjct: 405 DVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFF 464
Query: 587 VGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIA 646
GD + HP+ I + L+ + +R GY PD V HDVE EEK SL +HSEKLAIA
Sbjct: 465 NRGDKS-HPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIA 523
Query: 647 YGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDY 706
+GL+K G PIRVMKNLR C DCH+ K ++ +T EII+RD NRFHHF++G CSCK++
Sbjct: 524 FGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEF 583
Query: 707 W 707
W
Sbjct: 584 W 584
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 69/339 (20%)
Query: 31 IGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------------T 76
IG + AR+VFDE P I WN + Y + P +++ L++ T
Sbjct: 56 IGDMCYARQVFDEMHKPRIFL----WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFT 111
Query: 77 TP------------------EKNIVSWN----GMVSG-----FVKNGMVAEARRVFDAMP 109
P ++V + G+V+ ++K G ++ A +F++M
Sbjct: 112 YPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQ 171
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV--SWTV--MLGGLLKDSRVEDARK 165
V+++V+W + + VQ GN A F +M V S+TV ML + +E +
Sbjct: 172 VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEE 231
Query: 166 LFDMMPVKDV---VAVTNM-IGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR 221
++D +++ + V N + + + G E AR LF+EM +RNVV+W+TM+ GYA N
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 222 VDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM---------PVKPV 268
A LF M N V++ +L +H+G + E +F M P K
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
AC M+ G G ++ A +KM E D G W A++
Sbjct: 352 YAC--MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 41/404 (10%)
Query: 69 QAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGN 128
A+ L EKN + ++ V G + AR+VFD M + W ++ +GYV+
Sbjct: 31 HAIVLRTGFSEKNSL-LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 129 VEEAERLFWRM------PEKNVVSWTVMLGGLLKDSRVEDA------RKLFDMMPVKDVV 176
E+ L+ +M P++ + V L D A + F + +
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI---- 145
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP--- 233
T ++ Y + G L A LF+ M +++V W ++ + +A + F M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 234 -ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRA 287
+ + + +ML G + E +D K + CN ++ D G+ + A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDR-ARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
+ +FE+M++R+ +WS MI Y G EAL LF MQ EG N+
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVA----SALITMYVKCGDLVRAKWIFNRYPLK-DVVM 402
+ G++ + +V+S D++L + ++ + + G L A + P++ D +
Sbjct: 325 GLVNEGKRYFSLMVQSN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 403 WNSMITGYSQHG---LGEEALNVFRDMCLSGVPPDDISFIGVLS 443
W +++ + H LG++ +V L PD S+ +LS
Sbjct: 384 WGALLGACAVHRDMILGQKVADV-----LVETAPDIGSYHVLLS 422
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+++HA ++R+ F + + + L+ V GD+ A+ +F+ + +WN++ GY ++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
L E+L +++ M GV PD+ ++ V+ A S G C + + +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG----------DFSCGFALHAHVVK 137
Query: 474 Y--AC-------MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
Y C +V + + G+++ A + E M ++ D + W + L C
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVC 185
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 32/234 (13%)
Query: 9 RVCMVQVRFQC-TSTGAISRYARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAH 65
++C V+F T +S ++G +E +++D I NA + + +
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 66 QPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVR 121
A LFE ++N+VSW+ M+ G+ NG EA +F M N V++ ++
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 122 GYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNM 181
G V E +R F M + N D +E ++ + M ++
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSN-------------DKNLEPRKEHYACM--------VDL 358
Query: 182 IGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVSGYARNRRVDVARKLFEVMPE 234
+G G LEEA +MP + + W ++ A +R + + +K+ +V+ E
Sbjct: 359 LG---RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 302/542 (55%), Gaps = 18/542 (3%)
Query: 180 NMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER---- 235
++G Y G A LFDEMP+R++V+W +++SGY+ + K FEV+
Sbjct: 71 QLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLG---KCFEVLSRMMISE 127
Query: 236 -----NEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVVACNEMIMGFGFDGDVDR 286
NEV++ +M+ + G E + ++ V N I +G GD+
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
+ +FE + ++ +W+ MI ++ + G + L F +R G +
Sbjct: 188 SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCED 247
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
+ +H ++ F + + +AL+ +Y K G L + +F+ D + W +M
Sbjct: 248 MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
+ Y+ HG G +A+ F M G+ PD ++F +L+ACS+SG V+EG+ FE+M +Y+
Sbjct: 308 LAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR 367
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
++P ++HY+CMVDLLGR+G + DA ++++MPMEP + VWG+LLGACR + L A
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMF 586
E+L +LEP++ YV+LS++Y++ G W+D +R +K + +++ G S+IE K H F
Sbjct: 428 ERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKF 487
Query: 587 VGGDNNCHPEQPIIMKMLERLDGLLR-DAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAI 645
V GD + HPE I K L+ + ++ + GY FVLHDV E+ K + HSEK+A+
Sbjct: 488 VVGDWS-HPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAM 546
Query: 646 AYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKD 705
A+GLL V PI + KNLR+CGDCH K I+ + R II+RD+ RFHHF DG CSC D
Sbjct: 547 AFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSD 606
Query: 706 YW 707
YW
Sbjct: 607 YW 608
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
R +H ++V+S + ++ L+ Y++ G V A+ +F+ P +D+V WNS+I+GYS
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 414 GLGEEALNVFRDMCLS--GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
G + V M +S G P++++F+ ++SAC Y G +EGR I + K+ V +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI-HGLVMKFGVLEEV 169
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV----- 526
+ ++ G+ G + + ++ E + ++ + + W +++ H++ LAE +
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI---VIHLQNGLAEKGLAYFNM 225
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYS 575
+ EP A +L ED+ VVR +I G+S
Sbjct: 226 SRRVGHEPDQATFLAVLR-------SCEDMGVVRLAQGIHGLIMFGGFS 267
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 64/338 (18%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV- 113
+ +V Y + A LF+ PE+++VSWN ++SG+ G + + V M + V
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 114 -----VSWTSMVRGYVQEGNVEEAERL------FWRMPEKNVVSWTVMLGGLLKDSRVED 162
V++ SM+ V G+ EE + F + E VV+ + G K +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYG--KTGDLTS 187
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR------------------ 204
+ KLF+ + +K++V+ MI + + G E+ A F+ M +R
Sbjct: 188 SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCE 246
Query: 205 ----------------------NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTA 242
N T ++ Y++ R++ + +F + + ++WTA
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 243 MLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM--RE 296
ML Y G R+A + F+ M + P V ++ G V+ K FE M R
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 297 RDD---GTWSAMIKVYERKGFELEALGLFARMQREGAA 331
R D +S M+ + R G +A GL M E ++
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSS 404
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 47/269 (17%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
NA + Y + + LFE KN+VSWN M+ ++NG+ + F+ M R
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGH 231
Query: 112 --NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDM 169
+ ++ +++R G V A+ + +M GG + + A L D+
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQG----------IHGLIMFGGFSGNKCITTA--LLDL 279
Query: 170 MPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF 229
Y + GRLE++ +F E+ + + WT M++ YA + A K F
Sbjct: 280 ---------------YSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 230 EVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM-------PVKPVVACNEMIMGF 278
E+M + V++T +L +HSG + E +F+ M P +C M+
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC--MVDLL 382
Query: 279 GFDGDVDRAKAVFEKM-RERDDGTWSAMI 306
G G + A + ++M E G W A++
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 165/429 (38%), Gaps = 62/429 (14%)
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
+V ++ R+ +V Y++ G+ AE+LF MPE+++VSW ++ G +
Sbjct: 56 KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGK 115
Query: 163 ARKLFDMMPVKDV------VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG- 215
++ M + +V V +MI G EE R + + K V+ +V+
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175
Query: 216 ---YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFD----------- 261
Y + + + KLFE + +N VSW M++ + +G + +F+
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQ 235
Query: 262 AMPVKPVVACNEM------------IMGFGFDGD----------------VDRAKAVFEK 293
A + + +C +M IM GF G+ ++ + VF +
Sbjct: 236 ATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHE 295
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
+ D W+AM+ Y GF +A+ F M G + + + G
Sbjct: 296 ITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355
Query: 354 RQVHARLV-RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITG-- 409
+ + R D L S ++ + + G L A + P++ +W +++
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACR 415
Query: 410 -YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
Y LG +A ++ P D +++ + + S SG K+ I MK K V
Sbjct: 416 VYKDTQLGTKAAERLFEL----EPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVR 471
Query: 469 PG----IEH 473
IEH
Sbjct: 472 ASGCSYIEH 480
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 358 bits (918), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 335/638 (52%), Gaps = 58/638 (9%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T ++ Y + ++ A +F E P + SW M+ A + AV LF+ PE
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMP---KNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+N+VSWN +V+G ++NG + +A++VFDAMP R+VVSW +M++GY++ +EEA+ LF M
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
EKNVV+WT M+ G + V +A +LF MP +++V+ T MI G+ EA LF
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 200 EMPK----------------------------------RNVVT--WTT----------MV 213
EM K V++ W T +V
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLV 346
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM-PVKPVVACN 272
YA + + A+ L + S ++ Y +G + A F+ + + V+
Sbjct: 347 HMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
MI G+ GDV RA +F+K+ ++D TW+ MI + EA L + M R G
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE--FDQDLYVASALITMYVKCGDLVRAKW 390
D G+ +H + ++ +D DL + ++L++MY KCG + A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
IF + KD V WNSMI G S HGL ++ALN+F++M SG P+ ++F+GVLSACS+SG
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ G E+F++MK Y ++PGI+HY M+DLLGRAG++ +A E + +P PD V+G+LL
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 511 GAC----RTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
G C R +AE A +L +L+P NA +V L ++YA GR + + +R+++ +
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK 704
Query: 567 SVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKML 604
V K PG SW+ V +A++F+ GD + +++ +
Sbjct: 705 GVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIF 742
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 259/517 (50%), Gaps = 31/517 (5%)
Query: 25 ISRYARIGQIENARKVFDETPH---IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
I R G + +AR + D+ P I+R W ++++ Y + +A LFE PE+N
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVY-WTSLLSKYAKTGYLDEARVLFEVMPERN 107
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
IV+ N M++G+VK + EA +F MP +NVVSWT M+ +G E+A LF MPE
Sbjct: 108 IVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
+NVVSW ++ GL+++ +E A+++FD MP +DVV+ MI GY E +EEA+ LF +M
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 202 PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF- 260
++NVVTWT+MV GY R V A +LF MPERN VSWTAM+ G+ + REA F
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 261 ----DAMPVKP--------VVACNEMIMGFGFDGDVDRAKAVFEKMRERD-DGTWS-AMI 306
D V P AC + + F G+ A+ + D DG + +++
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLV 346
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
+Y G A L + + + + R V+S D
Sbjct: 347 HMYASSGLIASAQSLL------NESFDLQSCNIIINRYLKNGDLERAETLFER-VKSLHD 399
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
+ + +++I Y++ GD+ RA +F + KD V W MI+G Q+ L EA ++ DM
Sbjct: 400 KVSW--TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM-KCKYQVEPGIEHYACMVDLLGRAG 485
G+ P + ++ +LS+ + + +G+ I + K +P + +V + + G
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 486 QVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+ DA EI KM ++ D + W S++ H D A
Sbjct: 518 AIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKA 553
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 301/554 (54%), Gaps = 10/554 (1%)
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSG--- 215
A+ +FD D MI G+ E + L+ M N T+ +++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 216 -YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEM 274
A + ++ ++ E + + +++ Y +G + A FD +P V+ N +
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
I G+ G +D A +F KM E++ +W+ MI Y + EAL LF MQ +
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
+ G+ +H+ L ++ D + LI MY KCG++ A +F
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 395 YPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEG 454
K V W ++I+GY+ HG G EA++ F +M G+ P+ I+F VL+ACSY+G V+EG
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 455 REIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACR 514
+ IF SM+ Y ++P IEHY C+VDLLGRAG +++A +++MP++P+A++WG+LL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGY 574
H ++L E E L ++P + G YV ++++A +W+ R +K + V K+PG
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 575 SWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHD-VEEEEKT 633
S I +E H F+ GD + HPE I + L + GY P+ +L D V+++E+
Sbjct: 488 STISLEGTTHEFLAGDRS-HPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDERE 546
Query: 634 HSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRF 693
+ HSEKLAI YGL+K G IR+MKNLRVC DCH KLI+K+ R+I++RD RF
Sbjct: 547 AIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRF 606
Query: 694 HHFKDGYCSCKDYW 707
HHF+DG CSC DYW
Sbjct: 607 HHFRDGKCSCGDYW 620
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 135/253 (53%), Gaps = 15/253 (5%)
Query: 58 VAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWT 117
++A+ + Q H +T + E ++ + N +++ + G A +FD +P + VSW
Sbjct: 128 LSAFEETTQIHAQIT--KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 118 SMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV-- 175
S+++GYV+ G ++ A LF +M EKN +SWT M+ G ++ ++A +LF M DV
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 176 --VAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLF 229
V++ N + + G LE+ + + + K + V ++ YA+ ++ A ++F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 230 EVMPERNEVSWTAMLMGYTHSGRMREA-SEFFD--AMPVKP-VVACNEMIMGFGFDGDVD 285
+ + +++ +WTA++ GY + G REA S+F + M +KP V+ ++ + G V+
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 286 RAKAVFEKMRERD 298
K +F M ERD
Sbjct: 366 EGKLIFYSM-ERD 377
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 52/370 (14%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLK 156
A+ VFD + W M+RG+ E + L+ RM N ++ +L
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 157 DSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
S E+ ++ + DV AV ++I Y G + A LFD +P+ + V+W ++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-- 267
+ GY + ++D+A LF M E+N +SWT M+ GY + +EA + F M V+P
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 268 ------VVACNEM----------------------IMG------FGFDGDVDRAKAVFEK 293
+ AC ++ ++G + G+++ A VF+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
++++ W+A+I Y G EA+ F MQ+ G N + G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 354 RQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYS 411
+ + + R + ++ + + G L AK PLK + V+W +++
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 412 QHG---LGEE 418
H LGEE
Sbjct: 428 IHKNIELGEE 437
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 27/294 (9%)
Query: 41 FDETPHIHRTTSSW---------NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSG 91
F+ET IH + N+++ +Y A LF+ PE + VSWN ++ G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSW 147
+VK G + A +F M +N +SWT+M+ GYVQ +EA +LF M +V VS
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPK 203
L + +E + + + D V +I Y + G +EEA +F + K
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 204 RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEF 259
++V WT ++SGYA + A F M + N +++TA+L +++G + E
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 260 FDAMP----VKPVVACNEMIMG-FGFDGDVDRAKAVFEKMRERDDGT-WSAMIK 307
F +M +KP + I+ G G +D AK ++M + + W A++K
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGD---LVRAKWIFNRYPLKDVVMWNSMITGY 410
+Q+HAR++++ QD Y + ++ + L A+ +F+ + D +WN MI G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
S E +L +++ M S P + +F +L ACS +E +I + K E
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT-KLGYEND 149
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
+ +++ G A + +++P EPD + W S++ K+D+A K+A
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 531 QLEPKNA 537
+ KNA
Sbjct: 209 E---KNA 212
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 352 bits (902), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 219/748 (29%), Positives = 345/748 (46%), Gaps = 155/748 (20%)
Query: 49 RTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
RT N ++ ++ + +A +F+ PE++ +WN M+ + + +++A ++F +
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK------------ 156
PV+N +SW +++ GY + G+ EA LFW M + LG +L+
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 157 ---------------------------DSRVEDARKLFDMMP-VKDVVAVTNMIGGYCEE 188
R+ +A LF+ M K+ V T+M+ GY +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 189 GRLEEARALFDEMP---------------------------------------KRNVVTW 209
G +A F ++ K N+
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF--------- 260
+ ++ YA+ R ++ AR L E M + VSW +M++G G + EA F
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 261 -DAMPVKPVVAC------------------------------NEMIMGFGFDGDVDRAKA 289
D + ++ C N ++ + G +D A
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 290 VFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXX 349
VFE M E+D +W+A++ G EAL LF M+ G +
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 350 XDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITG 409
+ G+QVH ++S F L V ++L+TMY KCG L A IFN ++D++ W +I G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
Y+++GL E+A + F+SM+ Y + P
Sbjct: 506 YAKNGLLEDA-----------------------------------QRYFDSMRTVYGITP 530
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
G EHYACM+DL GR+G +++ +M +EPDA VW ++L A R H ++ E A + L
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 530 AQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGG 589
+LEP NA PYV LS+MY++ GR ++ VR +K+R++ K PG SW+E + K H F+
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 590 DNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGL 649
D HP I ++ + L+++AGY D SF LHD+++E K L YHSEKLA+A+GL
Sbjct: 651 DRR-HPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGL 709
Query: 650 LKVPEGMPIRVMKNLRVCGDCHSAIKLI 677
L VP G PIR++KNLRVCGDCHSA+KL+
Sbjct: 710 LVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%)
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEK 293
+R ++ +L + SGR+ EA + FD MP + N MI+ + + A+ +F
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
++ +W+A+I Y + G ++EA LF MQ +G N G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP-LKDVVMWNSMITGYSQ 412
Q+H +++ FD D+ V + L+ MY +C + A+++F K+ V W SM+TGYSQ
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+G +A+ FRD+ G + +F VL+AC+ + G ++ + K + I
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI-VKSGFKTNIY 263
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
+ ++D+ + ++ A ++E M ++ D + W S++ C
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-- 74
++ + + YA+ G +++A KVF+ I + SW A+V +A+ LF
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFE--GMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Query: 75 ----ETTPEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQE 126
TP+K +++S + ++ ++ G + P V+ S+V Y +
Sbjct: 421 MRVGGITPDKIVTASVLSASAELT-LLEFGQQVHGNYIKSGFPSSLSVN-NSLVTMYTKC 478
Query: 127 GNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTN------ 180
G++E+A +F M +++++WT ++ G K+ +EDA++ FD M + V +T
Sbjct: 479 GSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM--RTVYGITPGPEHYA 536
Query: 181 -MIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVSGYARNRRVD----VARKLFEVMPE 234
MI + G + L +M + + W +++ ++ ++ A+ L E+ P
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 235 RNEVSWTAMLMGYTHSGRMREAS 257
N V + + Y+ +GR EA+
Sbjct: 597 -NAVPYVQLSNMYSAAGRQDEAA 618
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 306/531 (57%), Gaps = 13/531 (2%)
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAML 244
G + +AR LFDE+P+RN+ ++ +++SG+ A +LF++M E ++ ML
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 245 -----MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
+G + G+ + V+C +I + GD++ A+ FE M E+
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARCAFECMPEKTT 290
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
W+ +I Y G+ EAL L M+ G +++ + +Q HA
Sbjct: 291 VAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHAS 350
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEA 419
L+R+ F+ ++ +AL+ Y K G + A+++F++ P K+++ WN+++ GY+ HG G +A
Sbjct: 351 LIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDA 410
Query: 420 LNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD 479
+ +F M + V P+ ++F+ VLSAC+YSG ++G EIF SM + ++P HYACM++
Sbjct: 411 VKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIE 470
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
LLGR G +++A+ + + P++ +W +LL ACR L+L V EKL + P+ G
Sbjct: 471 LLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Query: 540 YVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPI 599
YV++ +MY S G+ + V E ++++ + +P +W+EV + H F+ GD + +
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETV 590
Query: 600 IMKMLERLDGLLRDA---GYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGM 656
++ +++D L+ + GYS + +L DV+E+E+ YHSEKLAIAYGL+ PE
Sbjct: 591 KRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWN 650
Query: 657 PIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
P+++ +N R+C +CH ++ I+ VTGRE++VRDA+RFHHFK+G CSC YW
Sbjct: 651 PLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 63/339 (18%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK------- 80
+ + G I +AR++FDE P R S+ ++++ + +A LF+ E+
Sbjct: 168 HVKCGMIIDARRLFDEIPE--RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH 225
Query: 81 --------------------------------NIVSWNGMVSGFVKNGMVAEARRVFDAM 108
N G++ + K G + +AR F+ M
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM 285
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVEDAR 164
P + V+W +++ GY G EEA L + M + V + ++M+ K +++E +
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 165 K----LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
+ L ++VA T ++ Y + GR++ AR +FD++P++N+++W ++ GYA +
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 221 RVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVV--- 269
R A KLFE M N V++ A+L +SG + E F +M +KP
Sbjct: 406 RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY 465
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDD-GTWSAMIK 307
AC MI G DG +D A A + + W+A++
Sbjct: 466 AC--MIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLN 502
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 137/334 (41%), Gaps = 89/334 (26%)
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
PE+ ++ N ++ VK GM+ +ARR+FD +P RN+ S+ S++ G+V GN EA LF
Sbjct: 156 PEQYMM--NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 138 RMPEK-----------------------------------NVVSWTVMLGGLL----KDS 158
M E+ VV T + GL+ K
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 159 RVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK--------------- 203
+EDAR F+ MP K VA N+I GY G EEA L +M
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 204 -------------------RN-----VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
RN +V T +V Y++ RVD AR +F+ +P +N +S
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMR 295
W A++ GY + GR +A + F+ M V V ++ + G ++ +F M
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 296 ERDDGT-----WSAMIKVYERKGFELEALGLFAR 324
E ++ MI++ R G EA+ R
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR 487
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 25/300 (8%)
Query: 56 AMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV-- 113
++ Y + A FE PEK V+WN +++G+ +G EA + M V
Sbjct: 264 GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI 323
Query: 114 --VSWTSMVRGYVQEGNVEEAER----LFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF 167
+ + M+R + +E ++ L E +V+ T ++ K RV+ AR +F
Sbjct: 324 DQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVF 383
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVD 223
D +P K++++ ++GGY GR +A LF++M NV VT+ ++S A + +
Sbjct: 384 DKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSE 443
Query: 224 VARKLFEVMPERNEVSWTAM-------LMGYTHSGRMREASEFFDAMPVKPVVAC-NEMI 275
++F M E + + AM L+G G + EA F P+K V ++
Sbjct: 444 QGWEIFLSMSEVHGIKPRAMHYACMIELLG--RDGLLDEAIAFIRRAPLKTTVNMWAALL 501
Query: 276 MGFGFDGDVDRAKAVFEK---MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+++ + V EK M G + M +Y G EA G+ ++ +G ++
Sbjct: 502 NACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSM 561
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T + Y++ G+++ AR VFD+ P + SWNA++ Y + AV LFE
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPR--KNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 81 NI----VSWNGMVSGFVKNGMVAEARRVFDAMP-VRNV----VSWTSMVRGYVQEGNVEE 131
N+ V++ ++S +G+ + +F +M V + + + M+ ++G ++E
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 132 AERLFWRMPEKNVVS-WTVMLGGLLKDSRVEDAR----KLFDMMPVK--DVVAVTNMIGG 184
A R P K V+ W +L +E R KL+ M P K + V + NM
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNM--- 537
Query: 185 YCEEGRLEEARALFDEMPKRNV-----VTWT-------TMVSG-----YARNRRVDVARK 227
Y G+ EA + + + + + TW + +SG Y + + +K
Sbjct: 538 YNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQK 597
Query: 228 LFEVMPERNEVSWT 241
+ E+M E +E ++
Sbjct: 598 VDELMEEISEYGYS 611
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
++V+ ++ + F+ + Y+ + ++ M+VKCG ++ A+ +F+ P +++ + S+I+G+
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G EA +F+ M + +F +L A + G + G+++ K V
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL-HVCALKLGVVDNTFV 261
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
++D+ + G + DA E MP E + W +++ H
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALH 303
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 322/594 (54%), Gaps = 41/594 (6%)
Query: 123 YVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMI 182
Y + G+ A ++ RM +KN +S +++ G ++ + +ARK+FD MP + + MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 183 GGYCEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKL----FEVMPE 234
G + EE +LF EM + T ++ SG A R V + +++ + E
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 235 RNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
+ V +++ Y +G++++ +MPV+ +VA N +IMG
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA--------------- 168
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
+ G L L+ M+ G N G+
Sbjct: 169 ----------------QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
Q+HA ++ + V S+LI+MY KCG L A F+ +D VMW+SMI+ Y HG
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 415 LGEEALNVFRDMC-LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G+EA+ +F M + + ++++F+ +L ACS+SG +G E+F+ M KY +PG++H
Sbjct: 273 QGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKH 332
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
Y C+VDLLGRAG ++ A I+ MP++ D ++W +LL AC H ++A+ +++ Q++
Sbjct: 333 YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID 392
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
P ++ YVLL++++AS RW DV VR+ ++ ++V K G SW E + + H F GD +
Sbjct: 393 PNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRS- 451
Query: 594 HPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVP 653
+ I L+ L ++ GY PD + VLHD++EEEK L HSEKLA+A+ L+ +P
Sbjct: 452 QSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILP 511
Query: 654 EGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
EG PIR++KNLRVC DCH A K I+ + REI +RD +RFHHF +G CSC DYW
Sbjct: 512 EGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 191/423 (45%), Gaps = 23/423 (5%)
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
AV ++ +KN +S N +++G+V+ G + AR+VFD MP R + +W +M+ G +Q
Sbjct: 13 AVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN 72
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGLLKDS---RVEDARKLFDMMPVK-----DVVAVTNM 181
EE LF M LG + S R + +K D+V +++
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 132
Query: 182 IGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNE 237
Y G+L++ + MP RN+V W T++ G A+N + L+++M N+
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNEMIMGFGFDGDVDRAKAVFE 292
+++ +L + +R + A +K V + +I + G + A F
Sbjct: 193 ITFVTVLSSCSDLA-IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 293 KMRERDDGTWSAMIKVYERKGFELEALGLFARM-QREGAALNFPXXXXXXXXXXXXXXXD 351
+ + D+ WS+MI Y G EA+ LF M ++ +N D
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 352 HGRQVHARLV-RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITG 409
G ++ +V + F L + ++ + + G L +A+ I P+K D+V+W ++++
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCK-YQVE 468
+ H E A VF+++ L P D ++ + + + + + ++ E+ +SM+ K + E
Sbjct: 372 CNIHKNAEMAQRVFKEI-LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 469 PGI 471
GI
Sbjct: 431 AGI 433
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 143/363 (39%), Gaps = 90/363 (24%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+S Y+++G +A V+ + +S N ++ Y +A A +F+ P++ + +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSS--NILINGYVRAGDLVNARKVFDEMPDRKLTT 58
Query: 85 WNGMVSGFVKNGMVAEARRVFDAM--------------------PVRNV----------- 113
WN M++G ++ E +F M +R+V
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 114 --------VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARK 165
V +S+ Y++ G +++ E + MP +N+V+W ++ G ++ E
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 166 LFDMMPV-----KDVVAVT----------------------------------NMIGGYC 186
L+ MM + + VT ++I Y
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 187 EEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER-----NEVSWT 241
+ G L +A F E + V W++M+S Y + + D A +LF M E+ NEV++
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 242 AMLMGYTHSGRMREASEFFDAM----PVKPVVACNEMIMG-FGFDGDVDRAKAVFEKMRE 296
+L +HSG + E FD M KP + ++ G G +D+A+A+ M
Sbjct: 299 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 297 RDD 299
+ D
Sbjct: 359 KTD 361
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 296/529 (55%), Gaps = 10/529 (1%)
Query: 188 EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAM 243
E + A ++F + + TM+ GY + A + M +R + ++ +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 244 LMGYTHSGRMREASEF----FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
L T +RE + F V N +I +G G+++ + AVFEK+ +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQRE-GAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+WS+M+ G E L LF M E + G +H
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
L+R+ + ++ V ++L+ MYVKCG L +A IF + ++ + +++MI+G + HG GE
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
AL +F M G+ PD + ++ VL+ACS+SG VKEGR +F M + +VEP EHY C+V
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 479 DLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAG 538
DLLGRAG + +A+E ++ +P+E + ++W + L CR ++L ++A ++L +L N G
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 539 PYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQP 598
Y+L+S++Y+ W+DV R +I + + + PG+S +E++ K H FV D + HP+
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS-HPKCK 497
Query: 599 IIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPI 658
I KML +++ L+ GYSPD + +L +V+EEEK L HS+K+AIA+GLL P G I
Sbjct: 498 EIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSII 557
Query: 659 RVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
++ +NLR+C DCH+ K I+ + REI+VRD NRFH FK G CSCKDYW
Sbjct: 558 KIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 137/328 (41%), Gaps = 21/328 (6%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA----ERLFWRMPEKNVVSWTVMLGGLLK 156
A +F + + +M+RGYV + EEA + R E + ++ +L +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 157 DSRVEDARKL----FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
+ + +++ F + DV ++I Y G +E + A+F+++ + +W++M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 213 VSGYARNRRVDVARKLFEVM-PERN----EVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
VS A LF M E N E + L+ ++G + + ++
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL-LRN 263
Query: 268 VVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
+ N ++ D G +D+A +F+KM +R++ T+SAMI G AL +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR-SEFDQDLYVASALITMYVK 381
++M +EG + GR+V A +++ + + L+ + +
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 382 CGDLVRAKWIFNRYPL-KDVVMWNSMIT 408
G L A P+ K+ V+W + ++
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
+F+ E ++ N +++ + + G + + VF+ + + SW+SMV G E
Sbjct: 158 VFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSEC 217
Query: 133 ERLFWRM-PEKNV-VSWTVMLGGLLKDSRVEDARK-------LFDMMPVKDVVAVTNMIG 183
LF M E N+ + M+ LL + L + +++ T+++
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVS 239
Y + G L++A +F +M KRN +T++ M+SG A + + A ++F M E + V
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 240 WTAMLMGYTHSGRMREASEFFDAM 263
+ ++L +HSG ++E F M
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEM 361
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 58/243 (23%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE--------- 75
I+ Y R G++E + VF++ +T +SW++MV+A + + LF
Sbjct: 174 INMYGRCGEMELSSAVFEKLES--KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLK 231
Query: 76 -------------------------------TTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
E NI+ +V +VK G + +A +
Sbjct: 232 AEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRV 160
F M RN +++++M+ G G E A R+F +M ++ + V + +L V
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLV 351
Query: 161 EDARKLFDMMPVKDVVAVT--------NMIGGYCEEGRLEEARALFDEMP-KRNVVTWTT 211
++ R++F M + V T +++G G LEEA +P ++N V W T
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG---RAGLLEEALETIQSIPIEKNDVIWRT 408
Query: 212 MVS 214
+S
Sbjct: 409 FLS 411
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 223/724 (30%), Positives = 378/724 (52%), Gaps = 62/724 (8%)
Query: 30 RIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE---TTP---EKNIV 83
R G I A +F P ++ ++ A+ A + + L + P +N++
Sbjct: 38 RSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVI 97
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN 143
N +++ + K G + AR+VFD MP RNVVSWT+++ GYVQ GN +E LF M +
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-H 156
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDM---MPVKDVVAVTNMI---GGYCEEGRLE-EARA 196
L +L R E +++ + + + + V N + G C +G EA
Sbjct: 157 CFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 197 LFDEMPKRNVVTWTTMVS-----------------------GYARNRRVDVARKLF---E 230
+F+ + +N+VTW +M++ G+ R +++ L+ +
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSD 276
Query: 231 VMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
++P NEVS + + HS ++ + + +EM+ + D K
Sbjct: 277 LVP--NEVSKCCLQL---HSLTVKSGLVTQTEVATALIKVYSEMLEDY-----TDCYKLF 326
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
E RD W+ +I + E A+ LF ++++E + ++
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
H +HA++++ F D + ++LI Y KCG L +F+ +DVV WNSM+ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
S HG + L VF+ M + PD +FI +LSACS++G+V+EG IF SM K + P
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
+ HYAC++D+L RA + +A E++++MPM+PDA+VW +LLG+CR H L ++A +KL
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 531 QL-EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGG 589
+L EP N+ Y+ +S++Y ++G + + + ++++T V K P SW E+ K H F G
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622
Query: 590 DNNCHPEQPIIMKMLERLDGLLRDAGYSPD-HSFVLHDVEEEEKTHSLGYHSEKLAIAYG 648
+ P++ + + L+RL L++ GY P+ S +EE++ +L +HSEKLA+A+
Sbjct: 623 GRH-RPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFA 681
Query: 649 LLKVPEGMP-----IRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSC 703
+++ + I++MKN R+C DCH+ +KL +K+ G+EI++RD+NRFHHFKD CSC
Sbjct: 682 VMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSC 741
Query: 704 KDYW 707
DYW
Sbjct: 742 NDYW 745
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 267/426 (62%), Gaps = 2/426 (0%)
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
G++ A+ +F++M +R+ TWS M+ Y + G EAL LF E A+N
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 342 XXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
+ GRQ+H ++S FD +V S+L+++Y KCG A +FN P+K++
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+WN+M+ Y+QH ++ + +F+ M LSG+ P+ I+F+ VL+ACS++G V EGR F+ M
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 462 KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL 521
K + ++EP +HYA +VD+LGRAG++ +A+E++ MP++P VWG+LL +C H +L
Sbjct: 345 K-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTEL 403
Query: 522 AEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEK 581
A A +K+ +L P ++G ++ LS+ YA+ GR+ED R+ ++ R K G SW+E
Sbjct: 404 AAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERN 463
Query: 582 KAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSE 641
K H F G+ H + I + L L + AGY D S+VL +V+ +EK ++ YHSE
Sbjct: 464 KVHTFAAGERR-HEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSE 522
Query: 642 KLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYC 701
+LAIA+GL+ P PIRVMKNLRVCGDCH+AIK ++ T R IIVRD NRFH F+DG C
Sbjct: 523 RLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKC 582
Query: 702 SCKDYW 707
SC DYW
Sbjct: 583 SCNDYW 588
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAER 134
+T + ++ + +V + K G + AR++FD MP RNVV+W+ M+ GY Q G EEA
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 135 LFWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDM----MPVKDVVAVTNMIGGYC 186
LF +N+ S++ ++ + +E R++ + ++++ Y
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 187 EEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTA 242
+ G E A +F+E+P +N+ W M+ YA++ +LF+ M + N +++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 243 MLMGYTHSGRMREASEFFDAM 263
+L +H+G + E +FD M
Sbjct: 324 VLNACSHAGLVDEGRYYFDQM 344
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 61/292 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
+ + YA+ G+I ARK+FDE P R +W+ M+ Y Q + +A+ LF+ +N
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 82 I------------VSWNG---------------------------MVSGFVKNGMVAEAR 102
+ V N +VS + K G+ A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDS 158
+VF+ +PV+N+ W +M++ Y Q + ++ LF RM + N +++ +L
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 159 RVEDARKLFDMM------PV-KDVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWT 210
V++ R FD M P K ++ +M+G GRL+EA + MP W
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLG---RAGRLQEALEVITNMPIDPTESVWG 389
Query: 211 TMVSGYARNRRVDVAR----KLFEVMPERNEVSWTAMLMGYTHSGRMREASE 258
+++ ++ ++A K+FE+ P + + ++ Y GR +A++
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDAAK 440
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 151/351 (43%), Gaps = 17/351 (4%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------ 139
N +++ + K+ + ++RR F+ P ++ +W+S++ + Q + +M
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARAL 197
P+ +V+ +L + + M DV ++++ Y + G + AR +
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-EVMPER---NEVSWTAMLMGYTHSGRM 253
FDEMP+RNVVTW+ M+ GYA+ + A LF E + E N+ S+++++ +S +
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLL 233
Query: 254 REASEFF----DAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVY 309
+ + + ++ + G + A VF ++ ++ G W+AM+K Y
Sbjct: 234 ELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY 293
Query: 310 ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDL 369
+ + + LF RM+ G NF D GR ++ S +
Sbjct: 294 AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTD 353
Query: 370 YVASALITMYVKCGDLVRAKWIFNRYPLKDV-VMWNSMITGYSQHGLGEEA 419
++L+ M + G L A + P+ +W +++T + H E A
Sbjct: 354 KHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 125/318 (39%), Gaps = 53/318 (16%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
+++V Y + + A +F+ P++N+V+W+GM+ G+ + G EA +F N+
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 115 ----SWTS-----------------------------------MVRGYVQEGNVEEAERL 135
S++S +V Y + G E A ++
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 136 FWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRL 191
F +P KN+ W ML + S + +LF M + + + N++ G +
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 192 EEARALFDEMPKRNVVT----WTTMVSGYARNRRVDVARKLFEVMP-ERNEVSWTAMLMG 246
+E R FD+M + + + ++V R R+ A ++ MP + E W A+L
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Query: 247 YTHSGRMR----EASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
T A + F+ PV + + + + DG + A + +R+R +
Sbjct: 395 CTVHKNTELAAFAADKVFELGPVSSGMHIS-LSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 303 SAMIKVYERKGFELEALG 320
+ + V ER A G
Sbjct: 454 TGLSWVEERNKVHTFAAG 471
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 308/550 (56%), Gaps = 30/550 (5%)
Query: 178 VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNE 237
+T +I C + LF +P + + +++ ++ R L V R
Sbjct: 44 LTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRL-----PLHCVAYYRRM 98
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD--------------GD 283
+S YT + ++ ++ A+ + V C+ ++ GFG D GD
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADL-SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
++ A+ VF++M E+ W++++ +E+ G EA+ +F +M+ G +
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
G VH ++ D ++ + +ALI +Y +CGD+ +A+ +F++ +V W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 404 NSMITGYSQHGLGEEALNVFRDM---CLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
+MI+ Y HG G++A+ +F M C G P++++F+ VLSAC+++G V+EGR +++
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDC--GPIPNNVTFVAVLSACAHAGLVEEGRSVYKR 335
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI---VWGSLLGACRTHM 517
M Y++ PG+EH+ CMVD+LGRAG +++A + + ++ A +W ++LGAC+ H
Sbjct: 336 MTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHR 395
Query: 518 KLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
DL ++L LEP N G +V+LS++YA G+ ++V +R+ + ++ K GYS I
Sbjct: 396 NYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Query: 578 EVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLG 637
EVE K +MF GD + H E I + LE L ++ GY+P V+H VEEEEK +L
Sbjct: 456 EVENKTYMFSMGDES-HQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALR 514
Query: 638 YHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFK 697
YHSEKLA+A+GLLK + + I ++KNLR+C DCHSA K I+ V+ R+I VRD RFHHF+
Sbjct: 515 YHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQ 573
Query: 698 DGYCSCKDYW 707
+G CSC DYW
Sbjct: 574 NGSCSCLDYW 583
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 34/248 (13%)
Query: 87 GMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS 146
+V+ + K G + AR+VFD MP +++V+W S+V G+ Q G +EA ++F++M E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 147 WTVMLGGLLKDSRVEDARKL------------FDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
+ LL A L D+ +V T +I Y G + +A
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL----NVKLGTALINLYSRCGDVGKA 262
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM-----PERNEVSWTAMLMGYTH 249
R +FD+M + NV WT M+S Y + A +LF M P N V++ A+L H
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 250 SGRMREASEFFDAMP----VKPVV---ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT- 301
+G + E + M + P V C M+ G G +D A ++ T
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVC--MVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 302 ---WSAMI 306
W+AM+
Sbjct: 381 PALWTAML 388
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D ++ Y + G +E AR +FD MP++++V W ++VSG+ +N D A ++F M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 234 ER----NEVSWTAMLMGYTHSGRMREA--------SEFFDAMPVKPVVACNEMIMGFGFD 281
E + ++ ++L +G + SE D + VK A +I +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD-LNVKLGTA---LINLYSRC 256
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE-GAALNFPXXXXX 340
GDV +A+ VF+KM+E + W+AMI Y G+ +A+ LF +M+ + G N
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAV 316
Query: 341 XXXXXXXXXXDHGRQVHARLVRS 363
+ GR V+ R+ +S
Sbjct: 317 LSACAHAGLVEEGRSVYKRMTKS 339
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+QVHA L+ + + + + + LIT+ + +F PL D ++NS+I S+
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP-GIE 472
L + +R M S V P + +F V+ +C+ ++ G+ + C V G++
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV----HCHAVVSGFGLD 141
Query: 473 HY--ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
Y A +V + G + A ++ ++MP E + W SL+ + LA+ A++
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMP-EKSIVAWNSLVSGFEQN---GLADEAIQVFY 197
Query: 531 QL-----EPKNAGPYVLLS 544
Q+ EP +A LLS
Sbjct: 198 QMRESGFEPDSATFVSLLS 216
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-----ET 76
T I+ Y+R G + AR+VFD+ + ++W AM++AY QAV LF +
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETN--VAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMP-----VRNVVSWTSMVRGYVQEGNVEE 131
P N V++ ++S G+V E R V+ M + V MV + G ++E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 132 AERLFWRMPEKNVVS----WTVMLGGLLK----DSRVEDARKLFDMMPVK--DVVAVTNM 181
A + ++ + WT MLG D VE A++L + P V ++N+
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Query: 182 IGGYCEEGRLEEARALFDEMPKRNV 206
Y G+ +E + D M + N+
Sbjct: 425 ---YALSGKTDEVSHIRDGMMRNNL 446
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 342 bits (876), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/451 (39%), Positives = 256/451 (56%), Gaps = 14/451 (3%)
Query: 261 DAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALG 320
DA+ +V C + +G V+ A VF++M RD +W+ MI + G +AL
Sbjct: 141 DAIVATSLVRC------YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
++ RM EG + + G +H + ++V++ALI MY
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 381 KCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIG 440
KCG L A +FN +DV+ WNSMI GY HG G EA++ FR M SGV P+ I+F+G
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
+L CS+ G VKEG E FE M ++ + P ++HY CMVDL GRAGQ+ +++E++
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 374
Query: 501 PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVR 560
D ++W +LLG+C+ H L+L EVA++KL QLE NAG YVL++ +Y++ + +R
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 434
Query: 561 EKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDH 620
+ I++ + +PG+SWIE+ + H FV D+ HPE +I L + AGY P+
Sbjct: 435 KLIRSHDLQTVPGWSWIEIGDQVHKFV-VDDKMHPESAVIYSELGEVINRAILAGYKPED 493
Query: 621 SFVLHDVEEEEKTHSLG----YHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKL 676
S + LG HSEKLAIAYGL++ G +R+ KNLRVC DCHS K
Sbjct: 494 S---NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKY 550
Query: 677 IAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
++K REIIVRD RFHHF DG CSC DYW
Sbjct: 551 VSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW 147
+V + NG V A +VFD MPVR++VSW M+ + G +A ++ RM + V
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGD 207
Query: 148 TVMLGGLLKDSRVEDARKLFDMMP-------VKDVVAVTN-MIGGYCEEGRLEEARALFD 199
+ L LL A + M+ + V V+N +I Y + G LE A +F+
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 200 EMPKRNVVTWTTMVSGYARN----RRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMRE 255
M KR+V+TW +M+ GY + + RK+ N +++ +L+G +H G ++E
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 256 ASEFFDAM 263
E F+ M
Sbjct: 328 GVEHFEIM 335
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 282 GDVDRAKAVFEKMRERDDGT--WSAMIKVYERKGFELEALGLFARMQREGAA------LN 333
G + A+ +F+ + D T W+ +I+ + L ++ + RM + N
Sbjct: 53 GSLSHAQLLFDHF-DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN 393
F ++H ++RS F D VA++L+ Y G + A +F+
Sbjct: 112 FALKSCERIKSIPKCL-----EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFD 166
Query: 394 RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKE 453
P++D+V WN MI +S GL +AL++++ M GV D + + +LS+C++ +
Sbjct: 167 EMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 454 GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
G + + C + E + ++D+ + G + +A+ + M + D + W S++
Sbjct: 227 G-VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 139/372 (37%), Gaps = 69/372 (18%)
Query: 95 NGMVAEARRVFDAMPVRNVVS-WTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGG 153
G ++ A+ +FD S W ++RG+ + + + RM +L
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRM----------LLSS 101
Query: 154 LLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ + L +K + + G G L++A + T++V
Sbjct: 102 VSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDA------------IVATSLV 149
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----- 268
Y+ N V++A K+F+ MP R+ VSW M+ ++H G +A + M + V
Sbjct: 150 RCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSY 209
Query: 269 -----------------------VAC-----------NEMIMGFGFDGDVDRAKAVFEKM 294
+AC N +I + G ++ A VF M
Sbjct: 210 TLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGM 269
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
R+RD TW++MI Y G +EA+ F +M G N G
Sbjct: 270 RKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGV 329
Query: 355 QVHARLVRSEFDQDLYVA--SALITMYVKCGDLVRA-KWIFNRYPLKDVVMWNSMITGYS 411
+ H ++ S+F V ++ +Y + G L + + I+ +D V+W +++
Sbjct: 330 E-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCK 388
Query: 412 QH---GLGEEAL 420
H LGE A+
Sbjct: 389 IHRNLELGEVAM 400
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 305/558 (54%), Gaps = 15/558 (2%)
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMVSGYAR 218
AR++ + + ++ T +I GY EG+ +EA A++ M K + T++ ++
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 219 NRRVDVARKLFEVMPERNEVSW----TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEM 274
+ +++ R+ + M+ Y + A + FD MP + V++ E+
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA---A 331
I + G+++ A +FE + +D W+AM+ + + EAL F RM++ G
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI 391
+ D Q+ + S D + + SALI MY KCG++ A +
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH-VVIGSALIDMYSKCGNVEEAVNV 340
Query: 392 FNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGK 450
F K+V ++SMI G + HG +EAL++F M + + P+ ++F+G L ACS+SG
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
V +GR++F+SM + V+P +HY CMVDLLGR G++ +A+E+++ M +EP VWG+LL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 511 GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIK 570
GACR H ++AE+A E L +LEP G Y+LLS++YAS G W V VR+ IK + + K
Sbjct: 461 GACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Query: 571 LPGYSW-IEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE 629
P SW ++ + H F G+ N HP I LE L L GY PD S V +DV +
Sbjct: 521 TPAVSWVVDKNGQMHKFFPGNLN-HPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSD 579
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 689
K L H+EKLA+A+ LL I +MKNLR+C DCH ++L ++VTG+ II+RD
Sbjct: 580 NAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRD 639
Query: 690 ANRFHHFKDGYCSCKDYW 707
RFHHF+ G CSC D+W
Sbjct: 640 NMRFHHFRSGDCSCGDFW 657
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 24/265 (9%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N M+ +VK + AR+VFD MP R+V+SWT ++ Y + GN+E A LF +P K++V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM---- 201
+WT M+ G ++++ ++A + FD M + A + GY A D
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 202 ------PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMRE 255
P +VV + ++ Y++ V+ A +F M +N ++++M++G GR +E
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 256 ASEFFDAMPVKPVVACNEM-----IMGFGFDGDVDRAKAVFEKMRE-------RDDGTWS 303
A F M + + N + +M G VD+ + VF+ M + RD ++
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH--YT 425
Query: 304 AMIKVYERKGFELEALGLFARMQRE 328
M+ + R G EAL L M E
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVE 450
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 124/265 (46%), Gaps = 26/265 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
I Y + I+ ARKVFDE P R SW ++AAY + A LFE+ P K++V+
Sbjct: 191 IDMYVKCESIDCARKVFDEMPE--RDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYV----QEGNVEEAERLFW--- 137
W MV+GF +N EA FD M + + V GY+ Q G + A+R
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
Query: 138 ---RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
P +VV + ++ K VE+A +F M K+V ++MI G GR +EA
Sbjct: 309 KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEA 368
Query: 195 RALFDEMP-----KRNVVTWTTMVSGYARNRRVDVARKLFEVM-------PERNEVSWTA 242
LF M K N VT+ + + + VD R++F+ M P R+ +
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMV 428
Query: 243 MLMGYTHSGRMREASEFFDAMPVKP 267
L+G T GR++EA E M V+P
Sbjct: 429 DLLGRT--GRLQEALELIKTMSVEP 451
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N M+ Y + A +F+ PE++++SW +++ + + G + A +F+++P +++V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFD------ 168
+WT+MV G+ Q +EA F RM + + + V + G + A K D
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 169 ----MMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
P VV + +I Y + G +EEA +F M +NV T+++M+ G A + R
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 225 ARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFDAM-------PVKPVVACN 272
A LF M + N V++ LM +HSG + + + FD+M P + C
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC- 426
Query: 273 EMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
M+ G G + A + + M E G W A++
Sbjct: 427 -MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVR--AKWIFNRYPLKDVVMWNSMITGYS 411
+Q+H ++R DQ Y+ + LI K G + A+ + ++ +W ++I GY+
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
G +EA+ ++ M + P +F +L AC + GR+ F + + + +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ-FHAQTFRLRGFCFV 184
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
M+D+ + ++ A ++ ++MP E D I W L+ A + ++ E A E
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAA---YARVGNMECAAELFES 240
Query: 532 LEPKNAGPYVLLSHMYASKGRWED 555
L K+ + + +A + ++
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQE 264
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 215/611 (35%), Positives = 321/611 (52%), Gaps = 54/611 (8%)
Query: 117 TSMVRGYVQEGNVEEAERLFWRMP--EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK- 173
++ + Y G + A++LF +P EK+ V WT +L + + ++ KLF M K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 174 ---DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT----WTTMVSGYARNRRVDVAR 226
D V+V + G + L A+ K V+T ++ Y + V +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 227 KLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDR 286
++FE + E++ VSWT +L VV ++G ++R
Sbjct: 167 RIFEELEEKSVVSWTVVL---------------------DTVVK---------WEG-LER 195
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-REGAALNFPXXXXXXXXXX 345
+ VF +M ER+ W+ M+ Y GF E L L A M R G LNF
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 346 XXXXXDHGRQVHARLVRSEF-------DQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
GR VH ++ E D+ V +AL+ MY KCG++ + +F +
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
+VV WN++ +G + HG G +++F M + V PDD++F VLSACS+SG V EG F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMK 518
S++ Y +EP ++HYACMVDLLGRAG + +A ++ +MP+ P+ +V GSLLG+C H K
Sbjct: 375 HSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK 433
Query: 519 LDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
+++AE +L Q+ P N +L+S+MY ++GR + + +R ++ R + K+PG S I
Sbjct: 434 VEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIY 493
Query: 579 VEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEE--EEKTHSL 636
V H F GD + HP I L + +R AGY PD S ++ E EEK +L
Sbjct: 494 VNDSVHRFSSGDRS-HPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQAL 552
Query: 637 GYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHF 696
HSEKLA+ +GLL+ P+ V KNLR+C DCHSA+K+++KV REII+RD NRFH F
Sbjct: 553 CCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQF 612
Query: 697 KDGYCSCKDYW 707
K G CSC DYW
Sbjct: 613 KGGSCSCSDYW 623
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 62/360 (17%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S YA G++ A+K+FDE P + W +++++ + ++ LF K
Sbjct: 46 SNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK 105
Query: 81 ---------------------------------------NIVSWNGMVSGFVKNGMVAEA 101
++ N ++ + K G+V+E
Sbjct: 106 RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
+R+F+ + ++VVSWT ++ V+ +E +F MPE+N V+WTVM+ G L
Sbjct: 166 KRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 162 DARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEAR-----ALFDEM------PKRN 205
+ +L M + + V + +M+ + G L R AL EM +
Sbjct: 226 EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDD 285
Query: 206 VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM-- 263
V+ T +V YA+ +D + +F +M +RN V+W A+ G G+ R + F M
Sbjct: 286 VMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR 345
Query: 264 PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDGTWSAMIKVYERKGFELEA 318
VKP + ++ G VD F +R E ++ M+ + R G EA
Sbjct: 346 EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
NA++ Y + + +FE EK++VSW ++ VK + R VF MP RN V
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEK-----NVVSWTVMLGGLLKDSRVEDARKLF-- 167
+WT MV GY+ G E L M + N V+ ML + + R +
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY 269
Query: 168 ----DMM-----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
+MM DV+ T ++ Y + G ++ + +F M KRNVVTW + SG A
Sbjct: 270 ALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 219 NRRVDVARKLF-----EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKPVV- 269
+ + + +F EV P +++++TA+L +HSG + E F ++ ++P V
Sbjct: 330 HGKGRMVIDMFPQMIREVKP--DDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVD 387
Query: 270 --ACNEMIMGFGFDGDVDRAKAVFEKM 294
AC M+ G G ++ A+ + +M
Sbjct: 388 HYAC--MVDLLGRAGLIEEAEILMREM 412
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 287/545 (52%), Gaps = 45/545 (8%)
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARK-----LFEVMPERNEVSWTAMLMGYTHSG 251
+FD + + W T++ A DV+RK L+ M ER E S +
Sbjct: 105 VFDSIENHSSFMWNTLIRACAH----DVSRKEEAFMLYRKMLERGESSPDKHTFPF---- 156
Query: 252 RMREASEFFDAMPVKPVVACNEMIMGFGFD--------------GDVDRAKAVFEKMRER 297
+ +A + V C + GFG D G +D A+ VF++M ER
Sbjct: 157 -VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVH 357
+W++MI R G AL LF MQR + G H
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGY-TMQSVLSACAGLGSLSLGTWAH 274
Query: 358 ARLVRS---EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
A L+R + D+ V ++LI MY KCG L A+ +F +D+ WN+MI G++ HG
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 415 LGEEALNVFRDMC--LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
EEA+N F M V P+ ++F+G+L AC++ G V +GR+ F+ M Y +EP +E
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC-RTHMKLDLAEVAVEKLAQ 531
HY C+VDL+ RAG + +A+++V MPM+PDA++W SLL AC + ++L+E +
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 532 LEPKN-------AGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAH 584
+ N +G YVLLS +YAS RW DV +VR+ + + K PG S IE+ +H
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 585 MFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSF--VLHDVEEEEKTHSLGYHSEK 642
F GD + HP+ I + L+ +D LR GY PD S ++ + K +SL HSE+
Sbjct: 515 EFFAGDTS-HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSER 573
Query: 643 LAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCS 702
LAIA+GL+ +P PIR+ KNLRVC DCH KLI+KV EIIVRD RFHHFKDG CS
Sbjct: 574 LAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCS 633
Query: 703 CKDYW 707
C DYW
Sbjct: 634 CLDYW 638
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-----P 140
NG++ + G + AR+VFD MP R++VSW SM+ V+ G + A +LF M P
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 141 E----KNVVSWTVMLGGLLKDSRVED--ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
+ ++V+S LG L + RK D+ DV+ ++I YC+ G L A
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC-DVDVAMDVLVKNSLIEMYCKCGSLRMA 308
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER------NEVSWTAMLMGYT 248
+F M KR++ +W M+ G+A + R + A F+ M ++ N V++ +L+
Sbjct: 309 EQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACN 368
Query: 249 HSGRMREASEFFDAM 263
H G + + ++FD M
Sbjct: 369 HRGFVNKGRQYFDMM 383
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 156/390 (40%), Gaps = 43/390 (11%)
Query: 63 QAHQPHQAVTLFETTPEK--NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMV 120
Q Q H A TL T PE+ + + ++ V A RVFD++ + W +++
Sbjct: 63 QLKQLH-AFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLI 121
Query: 121 RGYVQE-GNVEEAERLFWRM-------PEKNVVSWTVMLGGLL------KDSRVEDARKL 166
R + EEA L+ +M P+K+ + + + K + +
Sbjct: 122 RACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG 181
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
F DV +I Y G L+ AR +FDEMP+R++V+W +M+ R D A
Sbjct: 182 FG----GDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 227 KLFEVMPERNEVSWTAM--------------LMGYTHSGRMREASEFFDAMPVKPVVACN 272
+LF M E M L + H+ +R+ D V+ N
Sbjct: 238 QLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC----DVDVAMDVLVKN 293
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM--QREGA 330
+I + G + A+ VF+ M++RD +W+AMI + G EA+ F RM +RE
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV 353
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE-FDQDLYVASALITMYVKCGDLVRAK 389
N + GRQ +VR + L ++ + + G + A
Sbjct: 354 RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI 413
Query: 390 WIFNRYPLK-DVVMWNSMITGYSQHGLGEE 418
+ P+K D V+W S++ + G E
Sbjct: 414 DMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 92/235 (39%), Gaps = 60/235 (25%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+ G I Y G ++ ARKVFDE P R+ SWN+M+ A + + A+ LF
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMP--ERSLVSWNSMIDALVRFGEYDSALQLFREMQRS 246
Query: 81 -----------------------------------------NIVSWNGMVSGFVKNGMVA 99
+++ N ++ + K G +
Sbjct: 247 FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLR 306
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK--NVVSWTVMLGGLLKD 157
A +VF M R++ SW +M+ G+ G EEA F RM +K NV +V GLL
Sbjct: 307 MAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIA 366
Query: 158 SR----VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT 208
V R+ FDMM V+D YC E LE + D + + +T
Sbjct: 367 CNHRGFVNKGRQYFDMM-VRD----------YCIEPALEHYGCIVDLIARAGYIT 410
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 53/257 (20%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF--------- 105
N ++ Y A +F+ PE+++VSWN M+ V+ G A ++F
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 106 DAMPVRNVVS------------W--------------------TSMVRGYVQEGNVEEAE 133
D +++V+S W S++ Y + G++ AE
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK------DVVAVTNMIGGYCE 187
++F M ++++ SW M+ G R E+A FD M K + V ++
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 188 EGRLEEARALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKLFEVMPER-NEVSWT 241
G + + R FD M + + + +V AR + A + MP + + V W
Sbjct: 370 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 242 AMLMGYTHSGRMREASE 258
++L G E SE
Sbjct: 430 SLLDACCKKGASVELSE 446
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 172/427 (40%), Positives = 252/427 (59%), Gaps = 5/427 (1%)
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR-EGAALNFPXXXXX 340
G+ AK V +++ TW+ MI Y R EAL M N
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
H + VH+ ++ S + + ++SAL+ +Y KCGD+ ++ +F DV
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
+WN+MITG++ HGL EA+ VF +M V PD I+F+G+L+ CS+ G ++EG+E F
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGL 291
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD 520
M ++ ++P +EHY MVDLLGRAG+V +A E++E MP+EPD ++W SLL + RT+ +
Sbjct: 292 MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPE 351
Query: 521 LAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVE 580
L E+A++ L++ + +G YVLLS++Y+S +WE + VRE + + K G SW+E
Sbjct: 352 LGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFG 408
Query: 581 KKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHS 640
H F GD + H E I K+LE L + G+ D VL DV EEEK +L YHS
Sbjct: 409 GMIHRFKAGDTS-HIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHS 467
Query: 641 EKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGY 700
EKLA+AY +LK G IR+ KN+R+C DCH+ IK ++K+ R II+RD RFH F+DG
Sbjct: 468 EKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGL 527
Query: 701 CSCKDYW 707
CSC+DYW
Sbjct: 528 CSCRDYW 534
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 122/287 (42%), Gaps = 28/287 (9%)
Query: 11 CMVQVRFQCTSTG----------AISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAA 60
C++Q Q G ++ Y R + AR++ + + N ++ +
Sbjct: 48 CVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIES 107
Query: 61 YFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV-----RNVVS 115
+ + A + ++N+++WN M+ G+V+N EA + M N S
Sbjct: 108 LMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFS 167
Query: 116 WTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP 171
+ S + + G++ A+ + M E N + + ++ K + +R++F +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARK 227
DV MI G+ G EA +F EM +V +T+ +++ + ++ ++
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 228 LFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
F +M R + + AM+ +GR++EA E ++MP++P V
Sbjct: 288 YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDV 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 119/272 (43%), Gaps = 21/272 (7%)
Query: 56 AMVAAYFQAHQPHQA--VTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV 113
+ VAAY + ++ + A + L+ + + + N ++ +K G A++V +NV
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNV 129
Query: 114 VSWTSMVRGYVQEGNVEEAERLFWRM-----PEKNVVSWTVMLGGLLKDSRVEDARKLFD 168
++W M+ GYV+ EEA + M + N S+ L + + A+ +
Sbjct: 130 ITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHS 189
Query: 169 MMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
+M + + + ++ Y + G + +R +F + + +V W M++G+A +
Sbjct: 190 LMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATE 249
Query: 225 ARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVVA-CNEMI 275
A ++F M + +++ +L +H G + E E+F M ++P + M+
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 276 MGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMI 306
G G V A + E M E D W +++
Sbjct: 310 DLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM-----PERNEVSWTAMLMGYT 248
A+ + +NV+TW M+ GY RN + + A K + M + N+ S+ + L
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 249 HSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWS 303
G + A ++ ++ + + N ++ D GD+ ++ VF ++ D W+
Sbjct: 177 RLGDLHHA-KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
AMI + G EA+ +F+ M+ E + + + G++ + R
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 364 -EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITG---YSQHGLGEE 418
L A++ + + G + A + P++ DVV+W S+++ Y LGE
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 419 AL 420
A+
Sbjct: 356 AI 357
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 375 LITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM-CLSGVPP 433
+I +K G+ AK + ++V+ WN MI GY ++ EEAL ++M + + P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 434 DDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA----CMVDLLGRAGQVND 489
+ SF L+AC+ G + + + M ++ GIE A +VD+ + G +
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLM-----IDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 490 AVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ E+ + D +W +++ TH LA A+ +++E ++ P
Sbjct: 219 SREVFYSVK-RNDVSIWNAMITGFATH---GLATEAIRVFSEMEAEHVSP 264
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 25 ISRYARIGQIENARKVFDET---PHIHRTTSSWNAMVAAYFQAHQPHQA----VTLFETT 77
I Y R Q E A K I S+ + +AA + H A + ++
Sbjct: 136 IGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSG 195
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
E N + + +V + K G + +R VF ++ +V W +M+ G+ G EA R+F
Sbjct: 196 IELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFS 255
Query: 138 RMPEKNVVSWTVMLGGLLKDSR----VEDARKLFDMMPVKDVV--------AVTNMIGGY 185
M ++V ++ GLL +E+ ++ F +M + + A+ +++G
Sbjct: 256 EMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLG-- 313
Query: 186 CEEGRLEEARALFDEMP-KRNVVTWTTMVSG 215
GR++EA L + MP + +VV W +++S
Sbjct: 314 -RAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/656 (31%), Positives = 341/656 (51%), Gaps = 49/656 (7%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM- 139
+++ N ++ + + + +A ++FD M N VS T+M+ Y ++G +++A LF M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 140 -----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGG----YCEEGR 190
P ++ +T +L L+ ++ R++ + + + T++ G Y + G
Sbjct: 177 ASGDKPPSSM--YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHS 250
L A+ +FD+M + V T ++ GY + R A KLF + V W + + S
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDS----FVFS 289
Query: 251 GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV----------------DRAKAVFEKM 294
++ + + K + AC + G + +V + A F+++
Sbjct: 290 VVLKACASLEELNLGKQIHAC---VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA-LNFPXXXXXXXXXXXXXXXDHG 353
RE +D +WSA+I Y + EA+ F ++ + A+ LN + G
Sbjct: 347 REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIG 406
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
QVHA ++ Y SALITMY KCG L A +F D+V W + I+G++ +
Sbjct: 407 GQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYY 466
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G EAL +F M G+ P+ ++FI VL+ACS++G V++G+ ++M KY V P I+H
Sbjct: 467 GNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH 526
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
Y CM+D+ R+G +++A++ ++ MP EPDA+ W L C TH L+L E+A E+L QL+
Sbjct: 527 YDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLD 586
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
P++ YVL ++Y G+WE+ + + + R + K SWI+ + K H F+ GD +
Sbjct: 587 PEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKH- 645
Query: 594 HPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVP 653
HP+ I + L+ DG + + + + E+ L HSE+LAIA+GL+ V
Sbjct: 646 HPQTQEIYEKLKEFDGFMEGDMFQCNMT---------ERREQLLDHSERLAIAFGLISVH 696
Query: 654 EG--MPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
PI+V KNLR C DCH K ++ VTG EI++RD+ RFHHFK+G CSC DYW
Sbjct: 697 GNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 186/502 (37%), Gaps = 100/502 (19%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------ 108
N ++ Y + A LF+ E N VS M+S + + G++ +A +F M
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGL----LKDSRVEDAR 164
P ++ +T++++ V ++ ++ + + S T + G+ +K + A+
Sbjct: 182 PPSSM--YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP---------------------- 202
++FD M VK VA T ++ GY + GR +A LF ++
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 203 -----------------KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLM 245
+ V T +V Y + + A + F+ + E N+VSW+A++
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 246 GYTHSGRMREASEFFDAMPVK-----------------PVVA-CN--------------- 272
GY + EA + F ++ K V+A CN
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 273 -------EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
+I + G +D A VFE M D W+A I + G EAL LF +M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS-EFDQDLYVASALITMYVKCGD 384
G N + G+ ++R + +I +Y + G
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 385 LVRAKWIFNRYPLK-DVVMWNSMITGYSQHG---LGEEALNVFRDMCLSGVPPDDISFIG 440
L A P + D + W ++G H LGE A R + P D ++
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL----DPEDTAGYVL 595
Query: 441 VLSACSYSGKVKEGREIFESMK 462
+ +++GK +E E+ + M
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMN 617
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 38/344 (11%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG ++ Y + G + A++VFD+ + + + MV Y QA + A+ LF +
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMV-GYTQAGRARDALKLFVDLVTEG 280
Query: 82 IVSWNGMVSGFVKNGMVA--------EARRVFDAMPVRNVVS-WTSMVRGYVQEGNVEEA 132
V W+ V V + + + + + VS T +V Y++ + E A
Sbjct: 281 -VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESA 339
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLE 192
R F + E N VSW+ ++ G + S+ E+A K F + K+ +++ + +
Sbjct: 340 CRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN----ASILNSFTYTSIFQ 395
Query: 193 EARALFD---------EMPKRNVVTW----TTMVSGYARNRRVDVARKLFEVMPERNEVS 239
L D + KR+++ + +++ Y++ +D A ++FE M + V+
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455
Query: 240 WTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMR 295
WTA + G+ + G EA F+ M +KP V ++ G V++ K + M
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 296 ERDD-----GTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
+ + + MI +Y R G EAL M E A+++
Sbjct: 516 RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 140/343 (40%), Gaps = 72/343 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y + E+A + F E + SW+A+++ Y Q Q +AV F++ KN
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDV--SWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 82 IVSWN----------------------------------------GMVSGFVKNGMVAEA 101
N +++ + K G + +A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKD 157
VF++M ++V+WT+ + G+ GN EA RLF +M + N V++ +L
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 158 SRVEDARKLFDMMPVKDVVAVT-----NMIGGYCEEGRLEEARALFDEMP-KRNVVTWTT 211
VE + D M K VA T MI Y G L+EA MP + + ++W
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 212 MVSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP--- 264
+SG ++ +++ +L ++ PE + + YT +G+ EA+E M
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPE-DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERM 620
Query: 265 VKPVVACN---------EMIMGFGFDGDVDRAKAVFEKMRERD 298
+K ++C+ I+G D + + ++EK++E D
Sbjct: 621 LKKELSCSWIQEKGKIHRFIVG---DKHHPQTQEIYEKLKEFD 660
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 314/627 (50%), Gaps = 80/627 (12%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y+R G++ AR +FDE P R SWN M+ Y + + ++ F+ PE++ SWN
Sbjct: 72 YSRSGKMGIARNLFDEMPD--RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV 129
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP-EKNVVS 146
+VSGF K G ++ ARR+F+AMP ++VV+ S++ GY+ G EEA RLF + + ++
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAIT 189
Query: 147 WT---------------------VMLGGLLKDSRVED--------------ARKLFDMMP 171
T +++GG+ DS++ A + + +
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEV 231
D +++ +I GY GR+ E+R LFD R V+ W +M+SGY N A LF
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 232 MPERNE----------------------------------------VSWTAMLMGYTHSG 251
M RNE V + +L Y+ G
Sbjct: 310 M--RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 252 RMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYER 311
EA + F + + N MI + G +D AK VFE++ + +W++M + +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 312 KGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYV 371
G +E L F +M + + + G QV AR D D V
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 372 ASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV 431
+S+LI +Y KCG + + +F+ D V WNSMI+GY+ +G G EA+++F+ M ++G+
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV 491
P I+F+ VL+AC+Y G V+EGR++FESMK + P EH++CMVDLL RAG V +A+
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 492 EIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKG 551
+VE+MP + D +W S+L C + + + A EK+ +LEP+N+ YV LS ++A+ G
Sbjct: 608 NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSG 667
Query: 552 RWEDVEVVREKIKTRSVIKLPGYSWIE 578
WE +VR+ ++ +V K PG SW +
Sbjct: 668 DWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 214/471 (45%), Gaps = 39/471 (8%)
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
++ N ++ + ++G + AR +FD MP RN SW +M+ GY+ G + R F MPE
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
++ SW V++ G K + AR+LF+ MP KDVV + +++ GY G EEA LF E+
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 202 P-KRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREA 256
+ +T TT++ A + +++ + E + ++++ Y G +R A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 257 SEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFEL 316
S + + + + +I G+ G V+ ++ +F++ R W++MI Y ++
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
EAL LF M+ E + + G+Q+H + D+ VAS L+
Sbjct: 302 EALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 377 TMYVKCGD-------------------------------LVRAKWIFNRYPLKDVVMWNS 405
MY KCG + AK +F R K ++ WNS
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 406 MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKY 465
M G+SQ+G E L F M +P D++S V+SAC+ ++ G ++F +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIV 479
Query: 466 QVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
++ + ++DL + G V + + M ++ D + W S++ T+
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATN 529
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
Q S+ I Y + G +E+ R+VFD + WN+M++ Y Q +A+ LF+
Sbjct: 485 QVVSSSLIDLYCKCGFVEHGRRVFD--TMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Query: 78 PEKNI----VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV-----SWTSMVRGYVQEGN 128
I +++ +++ G+V E R++F++M V + ++ MV + G
Sbjct: 543 SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGY 602
Query: 129 VEEAERLFWRMP-EKNVVSWTVMLGGLLKDSR----VEDARKLFDMMPVKDVVAVTNMIG 183
VEEA L MP + + W+ +L G + + + A K+ ++ P ++ VA +
Sbjct: 603 VEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEP-ENSVAYVQLSA 661
Query: 184 GYCEEGRLEEARALFDEMPKRNVVT 208
+ G E + AL ++ + N VT
Sbjct: 662 IFATSGDWESS-ALVRKLMRENNVT 685
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 298/537 (55%), Gaps = 24/537 (4%)
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWT-----AM 243
G L A +F +PK W ++ G+A + +A + M +++ S A+
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 244 LMGYTHSGRMRE-ASEFFDAMPVK--------PVVACNEMIMGFGFDGDVDRAKAVFEKM 294
+T R S D + + + C ++ + +GD+ A +F++M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
RD +W+A+I EA+ L+ RM+ EG + G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP-LKDVVMWNSMITGYSQH 413
+ + ++ V++A I MY KCG + +A +F ++ K VV WN+MITG++ H
Sbjct: 231 NI----FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G AL +F + +G+ PDD+S++ L+AC ++G V+ G +F +M CK VE ++H
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKH 345
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
Y C+VDLL RAG++ +A +I+ M M PD ++W SLLGA + +++AE+A ++ ++
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
N G +VLLS++YA++GRW+DV VR+ ++++ V K+PG S+IE + H F D +
Sbjct: 406 VNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKS- 464
Query: 594 HPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKV- 652
H + I + ++ + +R+ GY VLHD+ EEEK ++L YHSEKLA+AYGL+ +
Sbjct: 465 HEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMD 524
Query: 653 --PEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
E P+RV+ NLR+CGDCH K I+K+ REIIVRD RFH FKDG CSC+D+W
Sbjct: 525 GADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV--- 144
++ + KNG + A ++FD MPVR+V SW +++ G V EA L+ RM + +
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 145 -VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP- 202
V+ LG V++ +F +V+ I Y + G +++A +F++
Sbjct: 210 EVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASE 258
K++VVTW TM++G+A + A ++F+ + + ++VS+ A L H+G +
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 259 FFDAMPVKPV 268
F+ M K V
Sbjct: 330 VFNNMACKGV 339
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 16/311 (5%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D + T ++ Y + G L A LFDEMP R+V +W +++G R A +L++ M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 234 ----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKA 289
R+EV+ A L +H G ++E F V+ N I + G VD+A
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 290 VFEKMR-ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
VFE+ ++ TW+ MI + G AL +F +++ G +
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP-LKDVVMWNSMI 407
++G V + ++++ ++ + + G L A I + D V+W S++
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Query: 408 TG---YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCK 464
YS + E A ++M ++ +D F+ + + + G+ K+ + + M+ K
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGVN----NDGDFVLLSNVYAAQGRWKDVGRVRDDMESK 438
Query: 465 YQVE--PGIEH 473
QV+ PG+ +
Sbjct: 439 -QVKKIPGLSY 448
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 29/323 (8%)
Query: 31 IGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET-----TPEKNIVSW 85
G + A ++F P T+ WNA++ + + P A + + + + I
Sbjct: 50 FGDLSFAVQIFRYIPK--PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 86 NGMVSGF-VKNGMVAEARRVFDAMPVR--------NVVSWTSMVRGYVQEGNVEEAERLF 136
+ + F +K A D + + + + T+++ Y + G++ A +LF
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLE 192
MP ++V SW ++ GL+ +R +A +L+ M + + V V +G G ++
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP-ERNEVSWTAMLMGYTHSG 251
E +F NV+ + Y++ VD A ++FE +++ V+W M+ G+ G
Sbjct: 228 EGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG 287
Query: 252 RMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDGTWS 303
A E FD + +KP V+ + G V+ +VF M ER+ +
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG 347
Query: 304 AMIKVYERKGFELEALGLFARMQ 326
++ + R G EA + M
Sbjct: 348 CVVDLLSRAGRLREAHDIICSMS 370
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV---- 110
++ AY + A LF+ P +++ SWN +++G V +EA ++ M
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM 170
R+ V+ + + G+V+E E +F NV+ + K V+ A ++F+
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQF 267
Query: 171 P-VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVA 225
K VV MI G+ G A +FD++ + V++ ++ V+
Sbjct: 268 TGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Query: 226 RKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFG-F 280
+F M ERN + ++ + +GR+REA + +M + P + ++G
Sbjct: 328 LSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEI 387
Query: 281 DGDVDRAKAVFEKMRE---RDDGTWSAMIKVYERKG 313
DV+ A+ +++E +DG + + VY +G
Sbjct: 388 YSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQG 423
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 50/295 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL-------- 73
T + Y++ G + +A K+FDE P R +SWNA++A ++ +A+ L
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPV--RDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 74 ---------------------------FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFD 106
F N++ N + + K G V +A +VF+
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 107 AMP-VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVE 161
++VV+W +M+ G+ G A +F ++ + + VS+ L VE
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 162 DARKLFDMMPVKDVVAVTNMIGGYCE----EGRLEEARALFDEMPK-RNVVTWTTMVSG- 215
+F+ M K V G + GRL EA + M + V W +++
Sbjct: 326 YGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGAS 385
Query: 216 --YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
Y+ ++A + + M N+ + + Y GR ++ D M K V
Sbjct: 386 EIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 289/537 (53%), Gaps = 27/537 (5%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV 113
WNA++ ++ P QA+ L E NG+ + F V
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLE---------------NGVSVDK---FSLSLVLKA 130
Query: 114 VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK 173
S V+G +Q + L+ + +N ++G LK + +R++FD MP +
Sbjct: 131 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNC-----LIGLYLKCGCLGLSRQMFDRMPKR 185
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPK--RNVVTWTTMVSGYARNRR-VDVARKLFE 230
D V+ +MI GY + G + AR LFD MP +N+++W +M+SGYA+ VD+A KLF
Sbjct: 186 DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 231 VMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
MPE++ +SW +M+ GY GR+ +A FD MP + VV MI G+ G V AK +
Sbjct: 246 DMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXX 349
F++M RD +++M+ Y + + +EAL +F+ M++E L +
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 350 XDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITG 409
+H +V +F + ALI MY KCG + A +F K + WN+MI G
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
+ HGLGE A ++ + + PDDI+F+GVL+ACS+SG VKEG FE M+ K+++EP
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 485
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
++HY CMVD+L R+G + A ++E+MP+EP+ ++W + L AC H + + E+ + L
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 530 AQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMF 586
N YVLLS+MYAS G W+DV VR +K R + K+PG SWIE++ + H F
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 51/333 (15%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQ-AVTLFETTPEKNIV 83
I Y + G I +AR++FD P + SWN+M++ Y Q A LF PEK+++
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLI 253
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKN 143
SWN M+ G+VK+G + +A+ +FD MP R+VV+W +M+ GY + G V A+ LF +MP ++
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRD 313
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFD-------MMPVKDVVAV------------------ 178
VV++ M+ G +++ +A ++F ++P + +
Sbjct: 314 VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH 373
Query: 179 ---------------TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN---- 219
+I Y + G ++ A +F+ + +++ W M+ G A +
Sbjct: 374 LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGE 433
Query: 220 RRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFG 279
D+ ++ + + +++++ +L +HSG ++E F+ M K + G
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 493
Query: 280 FD-----GDVDRAKAVFEKMR-ERDDGTWSAMI 306
D G ++ AK + E+M E +D W +
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL 526
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G Q+H L ++ DL++ + LI +Y+KCG L ++ +F+R P +D V +NSMI GY +
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
GL A +F M P + + I S S + +G +I + E +
Sbjct: 200 CGLIVSARELFDLM-----PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP-EKDLI 253
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
+ M+D + G++ DA + + MP D + W +++ + KL A Q+
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDG---YAKLGFVHHAKTLFDQM 309
Query: 533 EPKNAGPY-VLLSHMYASKGRWEDVEVVREKIK--------TRSVIKLPGYSWIEVEKKA 583
++ Y +++ +K E +E+ + K T VI LP + + KA
Sbjct: 310 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Query: 584 ---HMFV 587
H+++
Sbjct: 370 IDMHLYI 376
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 285/519 (54%), Gaps = 13/519 (2%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
A RVF+ + NV S++R + Q +A +F M + + LLK
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 161 EDARKLFDMMP--------VKDVVAVTNMIGGYCEEGRL--EEARALFDEMPKRNVVTWT 210
+ + MM D+ +I Y G L +A LF++M +R+ V+W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
+M+ G + + AR+LF+ MP+R+ +SW ML GY M +A E F+ MP + V+
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMR--ERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+ M+MG+ GD++ A+ +F+KM ++ TW+ +I Y KG EA L +M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G + G ++H+ L RS + YV +AL+ MY KCG+L +A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+FN P KD+V WN+M+ G HG G+EA+ +F M G+ PD ++FI VL +C+++
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G + EG + F SM+ Y + P +EHY C+VDLLGR G++ +A+++V+ MPMEP+ ++WG+
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LLGACR H ++D+A+ ++ L +L+P + G Y LLS++YA+ WE V +R K+K+ V
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERL 607
K G S +E+E H F D + HP+ I +ML L
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKS-HPKSDQIYQMLGSL 587
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 147/272 (54%), Gaps = 14/272 (5%)
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
A+ LFE E++ VSWN M+ G VK G + +ARR+FD MP R+++SW +M+ GY + +
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREM 232
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV--KDVVAVTNMIGGYCE 187
+A LF +MPE+N VSW+ M+ G K +E AR +FD MP+ K+VV T +I GY E
Sbjct: 233 SKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAE 292
Query: 188 EGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS---- 239
+G L+EA L D+M K + ++++ + + + ++ ++ N S
Sbjct: 293 KGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER-- 297
A+L Y G +++A + F+ +P K +V+ N M+ G G G A +F +MR
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 298 --DDGTWSAMIKVYERKGFELEALGLFARMQR 327
D T+ A++ G E + F M++
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 59/359 (16%)
Query: 25 ISRYARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------- 75
IS + Q A +VF++ P++H N+++ A+ Q QP+QA +F
Sbjct: 58 ISALSLCRQTNLAVRVFNQVQEPNVHLC----NSLIRAHAQNSQPYQAFFVFSEMQRFGL 113
Query: 76 -----TTP---------------------------EKNIVSWNGMVSGFVKNGM--VAEA 101
T P +I N ++ + + G V +A
Sbjct: 114 FADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDA 173
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
++F+ M R+ VSW SM+ G V+ G + +A RLF MP+++++SW ML G + +
Sbjct: 174 MKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMS 233
Query: 162 DARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM--PKRNVVTWTTMVSGYARN 219
A +LF+ MP ++ V+ + M+ GY + G +E AR +FD+M P +NVVTWT +++GYA
Sbjct: 234 KAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEK 293
Query: 220 RRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMI 275
+ A +L + M + + ++L T SG + + + + N +
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK-RSNLGSNAYV 352
Query: 276 MGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+ D G++ +A VF + ++D +W+ M+ G EA+ LF+RM+REG
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG 411
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+Q+HA+++R +DL++A LI+ C A +FN+ +V + NS+I ++Q+
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
+A VF +M G+ D+ ++ +L ACS + + + ++ K + I
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE-KLGLSSDIYV 154
Query: 474 YACMVDLLGRAG--QVNDAVEIVEKMPMEPDAIVWGSLLGA 512
++D R G V DA+++ EKM E D + W S+LG
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGG 194
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 288/558 (51%), Gaps = 59/558 (10%)
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM- 263
+ T +V Y + + ++ ARKLF+ M E N VSWT+++ GY G+ + A F M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 264 ---PVKP------------------------------------VVACNEMIMGFGFDGDV 284
PV P +V + ++ +G DV
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 285 DRAKAVFEKM--RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
+ A+ VF+ M R+ +W++MI Y + EA+ LF AAL
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFN---AALTSDRANQFML 239
Query: 343 XXXXXXXXDHGRQ-----VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL 397
GR H + R ++ + VA++L+ MY KCG L A+ IF R
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 398 KDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI 457
V+ + SMI ++HGLGE A+ +F +M + P+ ++ +GVL ACS+SG V EG E
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 458 FESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM--EPDAIVWGSLLGACRT 515
M KY V P HY C+VD+LGR G+V++A E+ + + + E A++WG+LL A R
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 516 HMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYS 575
H ++++ A ++L Q + Y+ LS+ YA G WED E +R ++K +K S
Sbjct: 420 HGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACS 479
Query: 576 WIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGY------SPDHSFVLHDVEE 629
WIE + ++F GD +C E I + L+ L+ +++ G+ S V DV+E
Sbjct: 480 WIENKDSVYVFHAGDLSC-DESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDE 538
Query: 630 EEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRD 689
E K + H E+LA+AYGLL +P G IR+M NLR+C DCH A KLI+++ REI+VRD
Sbjct: 539 EAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRD 598
Query: 690 ANRFHHFKDGYCSCKDYW 707
NRFH FK+G C+C+DYW
Sbjct: 599 VNRFHCFKNGSCTCRDYW 616
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 27/259 (10%)
Query: 28 YARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSW 85
Y ++ +I ARK+FDE P++ SW ++++ Y +P A+++F+ E V
Sbjct: 74 YVKLKEINTARKLFDEMCEPNV----VSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 86 N--GMVSGFVKNGMVAEAR-------RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
N S F +AE+R R+ + RN+V +S+V Y + +VE A R+F
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 137 WRMP--EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV------KDVVAVTNMIGGYCEE 188
M +NVVSWT M+ +++R +A +LF + + ++I
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 189 GRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAML 244
GRL+ + + + N V T+++ YA+ + A K+F + + +S+T+M+
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 245 MGYTHSGRMREASEFFDAM 263
M G A + FD M
Sbjct: 310 MAKAKHGLGEAAVKLFDEM 328
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------ 139
N +V +VK + AR++FD M NVVSWTS++ GY G + A +F +M
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 140 -PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEA 194
P + + L +SR+ + + + + +++V ++++ Y + +E A
Sbjct: 128 PPNEYTFASVFKACSALAESRI--GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 185
Query: 195 RALFDEMP--KRNVVTWTTMVSGYARNRRVDVARKLFE-----VMPER-NEVSWTAMLMG 246
R +FD M RNVV+WT+M++ YA+N R A +LF + +R N+ +++
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 245
Query: 247 YTHSGRMREASEFFDAMP-----VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT 301
+ GR++ + VVA + + M + G + A+ +F ++R +
Sbjct: 246 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDM-YAKCGSLSCAEKIFLRIRCHSVIS 304
Query: 302 WSAMIKVYERKGFELEALGLFARM 325
+++MI + G A+ LF M
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEM 328
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 34/266 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----- 75
S+ + Y + +E AR+VFD R SW +M+ AY Q + H+A+ LF
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 76 -TTPEKNIVSWNGMVS----------GFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYV 124
T+ N ++S G V +G+V R +++ N V TS++ Y
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLV--TRGGYES----NTVVATSLLDMYA 282
Query: 125 QEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTN 180
+ G++ AE++F R+ +V+S+T M+ K E A KLFD M + V +
Sbjct: 283 KCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLG 342
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKL---FEVM 232
++ G + E M ++ V +T +V R RVD A +L EV
Sbjct: 343 VLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVG 402
Query: 233 PERNEVSWTAMLMGYTHSGRMREASE 258
E+ + W A+L GR+ SE
Sbjct: 403 AEQGALLWGALLSAGRLHGRVEIVSE 428
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
+H ++ F D + + L+ YVK ++ A+ +F+ +VV W S+I+GY+ G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 416 GEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
+ AL++F+ M VPP++ +F V ACS + + G+ I ++ + I
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVS 169
Query: 475 ACMVDLLGRAGQVNDAVEIVEKM-PMEPDAIVWGSLLGA----CRTHMKLDL 521
+ +VD+ G+ V A + + M + + W S++ A R H ++L
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 255/426 (59%), Gaps = 6/426 (1%)
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP---XXXXXXXX 343
A VF+++ +RD +W+ + Y R + L LF +M+ + P
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
D G+QVH + + L +++ L++MY +CG + +A +F ++VV W
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
++I+G + +G G+EA+ F +M G+ P++ + G+LSACS+SG V EG F+ M+
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Query: 464 -KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+++++P + HY C+VDLLGRA ++ A +++ M M+PD+ +W +LLGACR H ++L
Sbjct: 347 GEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELG 406
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKK 582
E + L +L+ + AG YVLL + Y++ G+WE V +R +K + + PG S IE++
Sbjct: 407 ERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGT 466
Query: 583 AHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE-EEEKTHSLGYHSE 641
H F+ D+ HP + I KML ++ L+ AGY + + LH++E EEEK ++L YHSE
Sbjct: 467 VHEFI-VDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSE 525
Query: 642 KLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYC 701
KLAIA+G+L P G IRV KNLR C DCH+ K ++ V R +IVRD +RFHHFK G C
Sbjct: 526 KLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSC 585
Query: 702 SCKDYW 707
SC D+W
Sbjct: 586 SCNDFW 591
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 28/288 (9%)
Query: 34 IENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGF- 92
I + +VF + ++ T S N M+ A+ + P + LF + + + N + S F
Sbjct: 62 INYSCRVFSQ--RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 93 ----VKNGMVAEAR----RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV 144
+K+G + ++F + + + T+++ Y N +A ++F +P+++
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 145 VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC--------EEGRLEEARA 196
VSW V+ L++ R D LFD M DV G C G L+ +
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMK-NDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 197 LFDEMPKRNVV----TWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
+ D + + + T+VS Y+R +D A ++F M ERN VSWTA++ G +G
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 253 MREASEFFDAMPVKPVVACNEMIMGF----GFDGDVDRAKAVFEKMRE 296
+EA E F+ M + + + G G V F++MR
Sbjct: 299 GKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 20/249 (8%)
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK-----NVVSWTVMLGGLLKD 157
RVF + +M+R + E RLF + N +S + L +K
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 158 SRV----EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ + K+F + D + +T ++ Y +A +FDE+PKR+ V+W +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 214 SGYARNRRVDVARKLFEVMPER-------NEVSWTAMLMGYTHSGRM---REASEFFDAM 263
S Y RN+R LF+ M + V+ L + G + ++ +F D
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 264 PVKPVV-ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
+ + N ++ + G +D+A VF MRER+ +W+A+I GF EA+ F
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 323 ARMQREGAA 331
M + G +
Sbjct: 307 NEMLKFGIS 315
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 323/681 (47%), Gaps = 101/681 (14%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
++++ AY + + LF+ +K+ V WN M++G+ K G + + F M +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDS---------RVE 161
N V++ ++ + ++ +L VV V G +K+S R +
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQL-----HGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 162 DARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTM----- 212
DA KLF MM D V MI GY + G +EE+ F EM V +T++++
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 213 ------------------------------VSGYARNRRVDVARKLFEVMPERNEVSWTA 242
+ Y + R V +A+ +F + V +TA
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM--------------------GF---- 278
M+ GY H+G ++ E F + VK ++ NE+ + GF
Sbjct: 412 MISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 279 GFD----------------GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
GFD G ++ A +FE++ +RD +W++MI + A+ +F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
+M G + G+ +H +++ D+Y S LI MY KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMC-LSGVPPDDISFIGV 441
G+L A +F K++V WNS+I HG +++L +F +M SG+ PD I+F+ +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
+S+C + G V EG F SM Y ++P EHYAC+VDL GRAG++ +A E V+ MP P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
DA VWG+LLGACR H ++LAEVA KL L+P N+G YVL+S+ +A+ WE V VR
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770
Query: 562 KIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHS 621
+K R V K+PGYSWIE+ K+ H+FV GD N HPE I +L L G LR GY P
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVN-HPESSHIYSLLNSLLGELRLEGYIPQPY 829
Query: 622 FVLHDVEEEEKTHSLGYHSEK 642
LH E K + + EK
Sbjct: 830 LPLHP-ESSRKVYPVSRFIEK 849
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 237/549 (43%), Gaps = 61/549 (11%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL------FETTPEKN 81
YA G + K+F + WN++++++ + +QA+ F +P+
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD-- 137
Query: 82 IVSWNGMVSGFV--KN--GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
+ ++ +V V KN G+ + V N +S+++ Y++ G ++ +LF
Sbjct: 138 VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 138 RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV--AVT-NMIGGYCEEGRLEEA 194
R+ +K+ V W VML G K ++ K F +M + + AVT + + C L +
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 195 RALFDEMPKRNVVTW-----TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTH 249
+ + V + +++S Y++ R D A KLF +M + V+W M+ GY
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 250 SGRMREASEFF----------DAMPVKPVVA----------CNEM---IMGFGFDGD--- 283
SG M E+ FF DA+ ++ C ++ IM D
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 284 -------------VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
V A+ +F + D ++AMI Y G +++L +F + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ N GR++H +++ FD + A+I MY KCG + A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
IF R +D+V WNSMIT +Q A+++FR M +SG+ D +S LSAC+
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
G+ I M K+ + + + ++D+ + G + A+ + + M E + + W S++
Sbjct: 558 ESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSII 615
Query: 511 GACRTHMKL 519
AC H KL
Sbjct: 616 AACGNHGKL 624
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 16/279 (5%)
Query: 181 MIGGYCEEGRLEEARALFDEMPKR--NVVTWTTMVSGYARNRRVDVARKL------FEVM 232
++G Y G + +F + R ++ W +++S + RN ++ A F V
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE-----MIMGFGFDGDVDRA 287
P+ VS L+ + + + +F + CNE +I + G +D
Sbjct: 136 PD---VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
+F+++ ++D W+ M+ Y + G + F+ M+ + + N
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMI 407
D G Q+H +V S D + + ++L++MY KCG A +F D V WN MI
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
+GY Q GL EE+L F +M SGV PD I+F +L + S
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 41/258 (15%)
Query: 23 GAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI 82
I YA+ G++ A ++F+ R SWN+M+ Q+ P A+ +F I
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSK--RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 83 ----VSWNGMVSGFVKNGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAER 134
VS + +S + + + M +V S ++++ Y + GN++ A
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMN 598
Query: 135 LFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEG 189
+F M EKN+VSW ++ +++D+ LF M K D + +I C G
Sbjct: 599 VFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTH 249
++E F M + + + P++ + L G
Sbjct: 659 DVDEGVRFFRSMTED------------------------YGIQPQQEHYACVVDLFG--R 692
Query: 250 SGRMREASEFFDAMPVKP 267
+GR+ EA E +MP P
Sbjct: 693 AGRLTEAYETVKSMPFPP 710
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK--DVVMWNSMITG 409
G+QVHA L+ + D Y ++ MY CG +F R L+ + WNS+I+
Sbjct: 53 QGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISS 112
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC--------------SYSGKVKEGR 455
+ ++GL +AL + M GV PD +F ++ AC + S +
Sbjct: 113 FVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 456 EIFESMKCKYQVEPG-----------IEHYAC-----MVDLLGRAGQVNDAVEIVEKMPM 499
E S K +E G + C M++ + G ++ ++ M M
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 500 E---PDAIVWGSLLGACRTHMKLDLAEVAVEKL---AQLEPKNAGPYVLLSHMYASKGRW 553
+ P+A+ + +L C + + +DL V + L + ++ + + LLS MY+ GR+
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLG-VQLHGLVVVSGVDFEGSIKNSLLS-MYSKCGRF 290
Query: 554 ED 555
+D
Sbjct: 291 DD 292
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/660 (30%), Positives = 336/660 (50%), Gaps = 69/660 (10%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
+ +S Y++ ++E A KVF+ + WNAM+ Y + H+ + LF
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEE--KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 75 --------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
+ KN+ N +V + K G + +AR
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
++F+ M R+ V+W +++ YVQ+ N EA LF RM +VS L LK
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK--ACTH 541
Query: 163 ARKLFDMMPV----------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
L+ V +D+ +++I Y + G +++AR +F +P+ +VV+ +
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 601
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
++GY++N ++ A LF+ M R +E+++ ++ + ++F + +
Sbjct: 602 IAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 660
Query: 269 VACNEMIMGFGFDG------DVDRAKAVFEKMRE-RDDGTWSAMIKVYERKGFELEALGL 321
+ E +G G + A A+F ++ + W+ M+ + + GF EAL
Sbjct: 661 SSEGEY-LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
+ M+ +G + GR +H+ + D D ++ LI MY K
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 779
Query: 382 CGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIG 440
CGD+ + +F+ + +VV WNS+I GY+++G E+AL +F M S + PD+I+F+G
Sbjct: 780 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 839
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
VL+ACS++GKV +GR+IFE M +Y +E ++H ACMVDLLGR G + +A + +E ++
Sbjct: 840 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 899
Query: 501 PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVR 560
PDA +W SLLGACR H E++ EKL +LEP+N+ YVLLS++YAS+G WE +R
Sbjct: 900 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 959
Query: 561 EKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLR-DAGYSPD 619
+ ++ R V K+PGYSWI+VE++ H+F GD + H E I LE L L++ DA +PD
Sbjct: 960 KVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS-HSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 169/743 (22%), Positives = 311/743 (41%), Gaps = 97/743 (13%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQA----VTLFETTPEK 80
+ YA+ Q+ A K FD + + ++WN+M++ Y +P + V+LFE
Sbjct: 102 VDLYAKCAQVSYAEKQFD---FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFP 158
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPV----RNVVSWTSMVRGYVQEGNVEEAERLF 136
N +++ ++S + V R++ +M RN ++V Y + + +A R+F
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLE 192
+ + N V WT + G +K E+A +F+ M + D +A +I Y G+L+
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSG- 251
+AR LF EM +VV W M+SG+ + VA + F M ++ V T +G S
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAI 337
Query: 252 ---RMREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRAKAVFEKMRERDDGTWS 303
+ A +K +A N ++ + ++ A VFE + E++D W+
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
AMI+ Y G + + LF M+ G ++ + G Q H+ +++
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
+ ++L+V +AL+ MY KCG L A+ IF R +D V WN++I Y Q EA ++F
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+ M L G+ D L AC++ + +G+++ + K ++ + + ++D+ +
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 484 AGQVNDAVEIVEKMP---------------------------------MEPDAIVWGSLL 510
G + DA ++ +P + P I + +++
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 511 GACRTHMKLDLAEVAVEKLAQLEPKNAGPYV---LLSHMYASKGRWEDVEVVREKIKTRS 567
AC L L ++ + + G Y+ LL S+G E + E +S
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSF----- 622
++ G M G N E+ + R DG+L PD +
Sbjct: 697 IVLWTG-----------MMSGHSQNGFYEEALKFYKEMRHDGVL------PDQATFVTVL 739
Query: 623 ----VLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIA 678
VL + E HSL +H +A+ L ++ I + CGD + ++
Sbjct: 740 RVCSVLSSLREGRAIHSLIFH-----LAHDLDELTSNTLIDMYAK---CGDMKGSSQVFD 791
Query: 679 KVTGREIIVRDANRFHHF-KDGY 700
++ R +V + + + K+GY
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGY 814
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 223/497 (44%), Gaps = 61/497 (12%)
Query: 31 IGQIE--NARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGM 88
+GQ + +RKVFDE P + A H + E + N +
Sbjct: 53 LGQCKLFKSRKVFDEMPQ---------RLALALRIGKAVHSKSLILGIDSEGRL--GNAI 101
Query: 89 VSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NV 144
V + K V+ A + FD + ++V +W SM+ Y G + R F + E N
Sbjct: 102 VDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK 160
Query: 145 VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGG-----YCEEGRLEEARALFD 199
+++++L +++ VE R++ M +K + + GG Y + R+ +AR +F+
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMRE 255
+ N V WT + SGY + + A +FE M + + +++ ++ Y G++++
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 256 ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFE 315
A F M VVA N MI G G G A F MR+ S++ G
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK------SSVKSTRSTLGSV 333
Query: 316 LEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
L A+G+ A + D G VHA ++ ++YV S+L
Sbjct: 334 LSAIGIVANL-------------------------DLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
++MY KC + A +F K+ V WN+MI GY+ +G + + +F DM SG DD
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 436 ISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVE 495
+F +LS C+ S ++ G + F S+ K ++ + +VD+ + G + DA +I E
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 496 KMPMEPDAIVWGSLLGA 512
+M + D + W +++G+
Sbjct: 488 RM-CDRDNVTWNTIIGS 503
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
+ TS I YA+ G ++ + +VFDE SWN+++ Y + A+ +F++
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 78 PEKNI----VSWNGMVSGFVKNGMVAEARRVFDAM--------PVRNVVSWTSMVR--GY 123
+ +I +++ G+++ G V++ R++F+ M V +V ++ GY
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 124 VQEG-NVEEAERLFWRMPEKNVVSWTVMLGGLL---KDSRVE-DARKLFDMMPVKDVVAV 178
+QE + EA+ L P+ + W+ +LG D R E A KL ++ P ++ A
Sbjct: 886 LQEADDFIEAQNL---KPDARL--WSSLLGACRIHGDDIRGEISAEKLIELEP-QNSSAY 939
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNV 206
+ Y +G E+A AL M R V
Sbjct: 940 VLLSNIYASQGCWEKANALRKVMRDRGV 967
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 220/786 (27%), Positives = 362/786 (46%), Gaps = 110/786 (13%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T +S YA+ G I +ARKVFD R +W+AM+ AY + ++ + LF +
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRE--RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 82 IVS---------------------------------------WNGMVSGFVKNGMVAEAR 102
++ N +++ + K G + A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDS 158
+ F M R+V++W S++ Y Q G EEA L M ++ + V+W +++GG +
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 159 RVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEARALFDEM------PKR---- 204
+ + A L M DV T MI G G +A +F +M P
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 205 -----------------------------NVVTWTTMVSGYARNRRVDVARKLFEVMPER 235
+V+ ++V Y++ +++ ARK+F+ + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVF 291
+ +W +M+ GY +G +A E F M ++P ++ N MI G+ +GD A +F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 292 EKMR-----ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
++M +R+ TW+ +I Y + G + EAL LF +MQ N
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
R++H ++R D V +AL Y K GD+ ++ IF KD++ WNS+
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSL 596
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
I GY HG AL +F M G+ P+ + ++ A G V EG+++F S+ Y
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
+ P +EH + MV L GRA ++ +A++ +++M ++ + +W S L CR H +D+A A
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 716
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLP-GYSWIEVEKKAHM 585
E L LEP+N ++S +YA + + K + +++K P G SWIEV H
Sbjct: 717 ENLFSLEPENTATESIVSQIYALGAKL-GRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHT 775
Query: 586 FVGGDNN--CHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKL 643
F GD + C +++ + RLD R Y+ + +EEE + + G HSEK
Sbjct: 776 FTTGDQSKLCTDVLYPLVEKMSRLDN--RSDQYNGELW-----IEEEGREETCGIHSEKF 828
Query: 644 AIAYGLLKVP--EGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYC 701
A+A+GL+ IR++KNLR+C DCH K ++K G +I++ D HHFK+G C
Sbjct: 829 AMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDC 888
Query: 702 SCKDYW 707
SCKDYW
Sbjct: 889 SCKDYW 894
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 212/479 (44%), Gaps = 73/479 (15%)
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
F E NI+ + +NG + EA + D++ + Q V+ +
Sbjct: 39 FTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSL--------------FQQGSKVKRST 83
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
L ++ E + S ++ LG R+ AR F + DV T ++ Y + G + +
Sbjct: 84 YL--KLLESCIDSGSIHLG------RILHAR--FGLFTEPDVFVETKLLSMYAKCGCIAD 133
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTH 249
AR +FD M +RN+ TW+ M+ Y+R R KLF +M + ++ + +L G +
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 250 SGRMREASEFFDAMPVK-PVVAC----NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSA 304
G + EA + ++ +K + +C N ++ + G++D A F +MRERD W++
Sbjct: 194 CGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 305 MIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE 364
++ Y + G EA+ L M++EG + V ++
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGL---------------------VTWNILIGG 291
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFR 424
++Q +A+ DL++ F DV W +MI+G +G+ +AL++FR
Sbjct: 292 YNQLGKCDAAM--------DLMQKMETFG--ITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 425 DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M L+GV P+ ++ + +SACS + +G E+ S+ K + +VD+ +
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 542
G++ DA ++ + + D W S++ G C+ A E +++ N P ++
Sbjct: 401 GKLEDARKVFDSVK-NKDVYTWNSMITGYCQA----GYCGKAYELFTRMQDANLRPNII 454
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 208/691 (30%), Positives = 336/691 (48%), Gaps = 66/691 (9%)
Query: 82 IVSWNGMVSGFVKNGMVA-----------EARRVFDAMPVRNVVSWTSMVRGYVQEGNVE 130
IV + S FV N +++ + ++FD +P R+V SW ++V V+EG
Sbjct: 207 IVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 131 EAERLFWRMPE---------------KNVVSWTVMLGG-----------LLKDSRVEDA- 163
+A LF+ M + +V+L G L+++ V +A
Sbjct: 267 KAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNAL 326
Query: 164 -------------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
L++MM +D V T MI Y G ++ A +F + ++N +T+
Sbjct: 327 IGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 211 TMVSGYARNRRVDVARKLFEVMPERN-EVSWTAMLMGYTHSGRMRE--ASEFFDAMPVKP 267
+++G+ RN A KLF M +R E++ ++ G + E SE +K
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 268 VVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGT--WSAMIKVYERKGFELEALG 320
A N I D + A+ +F++ D + +++I Y R G +A+
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVS 506
Query: 321 LFAR-MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
LF R + + L+ + G Q+H +++ + D+ + ++LI+MY
Sbjct: 507 LFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMY 566
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
KC D A IFN DV+ WNS+I+ Y G+EAL ++ M + PD I+
Sbjct: 567 AKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLT 626
Query: 440 GVLSACSY--SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
V+SA Y S K+ R++F SMK Y +EP EHY V +LG G + +A + + M
Sbjct: 627 LVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM 686
Query: 498 PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVE 557
P++P+ V +LL +CR H +A+ + + +P+ Y+L S++Y++ G W E
Sbjct: 687 PVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSE 746
Query: 558 VVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYS 617
++RE+++ R K P SWI E K H F D + HP++ I + LE L GY
Sbjct: 747 MIREEMRERGYRKHPAKSWIIHENKIHSFHARDTS-HPQEKDIYRGLEILIMECLKVGYE 805
Query: 618 PDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKV-PEGMPIRVMKNLRVCGDCHSAIKL 676
P+ +VL +V+E K L +HS KLA+ YG+L G P+RVMKN+ +CGDCH K
Sbjct: 806 PNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKY 865
Query: 677 IAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
I+ V REI++RD++ FHHF +G CSC+D W
Sbjct: 866 ISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 222/482 (46%), Gaps = 27/482 (5%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
NA+++ Y + P +A+ +F + +VS+ ++SGF + + EA +VF M +V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 115 -----SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL----KD--SRVEDA 163
++ +++ V+ ++ + + ++ + L+ KD S +D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 164 RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK-----RNVVTWTTMVSGYAR 218
KLFD +P +DV + ++ +EG+ +A LF EM + + T +T++S
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 219 NRRVDVARKLFE---VMPERNEVSWTAMLMG-YTHSGRMREASEFFDAMPVKPVVACNEM 274
+ + R+L + E+S L+G Y+ M++ ++ M + V EM
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
I + G VD A +F + E++ T++A++ + R G L+AL LF M + G L
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
Q+H ++ + + +AL+ M +C + A+ +F++
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 395 YP--LKDVVMWNSMITGYSQHGLGEEALNVF-RDMCLSGVPPDDISFIGVLSACSYSGKV 451
+P L S+I GY+++GL ++A+++F R +C + D++S +L+ C G
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 452 KEGREIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ G +I ++K Y + + + ++ + + +DA++I M E D I W SL+
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTM-REHDVISWNSLI 594
Query: 511 GA 512
Sbjct: 595 SC 596
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 250/437 (57%), Gaps = 5/437 (1%)
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW 240
+ G C G + A +F EM ++NVV WT+M++GY N+ + AR+ F++ PER+ V W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
M+ GY G M EA FD MP + V++ N ++ G+ GD++ + VF+ M ER+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHAR 359
+W+ +IK Y + G E LG F RM EG+ + N D G+ VH
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 360 LVRSEFDQ-DLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
+++ D+ V +ALI MY KCG + A +F +D++ WN+MI G + HG G E
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
ALN+F +M SG+ PD ++F+GVL AC + G V++G F SM + + P IEH C+V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 479 DLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAG 538
DLL RAG + AVE + KMP++ DA++W +LLGA + + K+D+ EVA+E+L +LEP+N
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 539 PYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQP 598
+V+LS++Y GR++D ++ ++ K G SWIE + F HP
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK-HPRTE 452
Query: 599 IIMKMLERLD--GLLRD 613
+ ++L L +LRD
Sbjct: 453 ELQRILRELKSFNILRD 469
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 17/341 (4%)
Query: 96 GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
G++A A +VF M +NVV WTSM+ GY+ ++ A R F PE+++V W M+ G +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 156 KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
+ + +AR LFD MP +DV++ ++ GY G +E +FD+MP+RNV +W ++ G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 216 YARNRRVDVARKLFEVMPERNEV-----------SWTAMLMGYTHSGRMREASEFFDAMP 264
YA+N RV F+ M + V S A L + + + E
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
V V N +I +G G ++ A VF+ ++ RD +W+ MI G EAL LF
Sbjct: 222 VDVNVK-NALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHE 280
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQ-VHARLVRSEFDQDLYVASALITMYVKCG 383
M+ G + + + G ++ ++ ++ + + G
Sbjct: 281 MKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAG 340
Query: 384 DLVRAKWIFNRYPLK-DVVMWNSMITG---YSQHGLGEEAL 420
L +A N+ P+K D V+W +++ Y + +GE AL
Sbjct: 341 FLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVAL 381
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 56/335 (16%)
Query: 31 IGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVS 90
+G I +A KVF E + + W +M+ Y A F+ +PE++IV WN M+S
Sbjct: 41 MGVIASANKVFCEM--VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMIS 98
Query: 91 GFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVM 150
G+++ G + EAR +FD MP R+V+SW +++ GY G++E ER+F MPE+NV SW +
Sbjct: 99 GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 151 LGGLLKDSRVEDARKLFDMMPVK------------------------------------- 173
+ G ++ RV + F M +
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 174 ----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF 229
DV +I Y + G +E A +F + +R++++W TM++G A + A LF
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 230 EVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVVA-CNEMIMGFGF 280
M ++V++ +L H G + + +F++M + P + C ++
Sbjct: 279 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 281 DGDVDRAKAVFEKMRERDDGT-WSAMI---KVYER 311
G + +A KM + D W+ ++ KVY++
Sbjct: 339 AGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 373
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 315/657 (47%), Gaps = 72/657 (10%)
Query: 20 TSTGAISR-YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
T T +IS Y+R I K D+ +H + + FQ
Sbjct: 25 TITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQ--------------- 69
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
+K V W + G V + A ++F +P +VV W +M++G+ + E RL+
Sbjct: 70 KKLFVFWCSRLGGHV-----SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 139 MPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEG 189
M ++ V ++ +L GL +D K VK ++ ++ Y G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 190 RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWT-------- 241
++ AR +FD K +V +W M+SGY R + + + +L M ERN VS T
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVL 243
Query: 242 --------------------------------AMLMGYTHSGRMREASEFFDAMPVKPVV 269
A++ Y G M A F +M + V+
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+ ++ G+ G++ A+ F++M RD +W+ MI Y R G E+L +F MQ G
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ + G + + +++ D+ V +ALI MY KCG +A+
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F+ +D W +M+ G + +G G+EA+ VF M + PDDI+++GVLSAC++SG
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
V + R+ F M+ +++EP + HY CMVD+LGRAG V +A EI+ KMPM P++IVWG+L
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
LGA R H +AE+A +K+ +LEP N Y LL ++YA RW+D+ VR KI ++
Sbjct: 544 LGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHD 626
K PG+S IEV AH FV GD + + I MK LE L A Y PD S +L +
Sbjct: 604 KTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMK-LEELAQESTFAAYLPDTSELLFE 659
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 317/647 (48%), Gaps = 76/647 (11%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRT-TSSWNAMVAAYFQAHQPHQAVTLF--------- 74
IS YAR+G + +AR VF+ + + WN+++ A A+ L+
Sbjct: 96 ISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLT 155
Query: 75 ------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
+ ++N+ N +++ + K G + +A +
Sbjct: 156 GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNL 215
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF-WRMPEK---NVVSWTVMLGGLLKDSRV 160
F MPVRN +SW M++G+ QE + E A ++F W E+ + V+WT +L + +
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
ED K F +M + N + G E F + ++ V GY
Sbjct: 276 EDVLKYFHLMRMSG-----NAVSG-------EALAVFFSVCAELEALSIAEKVHGYV--- 320
Query: 221 RVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGF 280
+ E +P RN A++ Y G++++A F + K + + N +I F
Sbjct: 321 ---IKGGFEEYLPSRN-----ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 281 DGDVDRAKAVFEKMRERDDG--------TWSAMIKVYERKGFELEALGLFARMQREGAAL 332
G +D A ++F ++ E + TW+++IK +G ++L F +MQ
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
N + GR++H ++R+ +++ V +AL+ MY KCG L +F
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
KD++ WNS+I GY HG E+AL++F M SG PD I+ + VLSACS++G V+
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+GREIF SM ++ +EP EHYAC+VDLLGR G + +A EIV+ MPMEP V G+LL +
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 513 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLP 572
CR H +D+AE +L+ LEP+ G Y+LLS++Y++ GRWE+ VR K + + K+
Sbjct: 613 CRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVS 672
Query: 573 GYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPD 619
G SWIEV+KK + F G + E I +LE L + G + D
Sbjct: 673 GSSWIEVKKKKYKFSSG-SIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 330/677 (48%), Gaps = 79/677 (11%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQ---AHQPHQAVTLFETTPEKN 81
++ YA+ G++ A +F+ I + SWN+++ Y Q + + LF ++
Sbjct: 56 VNFYAKCGKLAKAHSIFNAI--ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD 113
Query: 82 IVSWNGMVSGFVKNGMVAEAR---RVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEAE 133
I+ ++G K ++ R A+ V+ ++ TS+V Y + G VE+
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM---------------PVKDVVAV 178
++F MPE+N +W+ M+ G RVE+A K+F++ V +A
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV 238
T +G + + L + N +V+ Y++ ++ A K+F+ +RN +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNA-----LVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP--------VVACNEM------------I 275
+W+AM+ GY+ +G EA + F M +KP + AC+++ +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 276 MGFGFD----------------GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
+ GF+ G + A+ F+ ++ERD W+++I Y + EAL
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 408
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
L+ RM+ G N P + G+QVH ++ F ++ + SAL TMY
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
KCG L +F R P KDVV WN+MI+G S +G G+EAL +F +M G+ PDD++F+
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFV 528
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM 499
++SACS+ G V+ G F M + ++P ++HYACMVDLL RAGQ+ +A E +E +
Sbjct: 529 NIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANI 588
Query: 500 EPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVV 559
+ +W LL AC+ H K +L A EKL L + + YV LS +Y + GR DVE V
Sbjct: 589 DHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERV 648
Query: 560 REKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSP- 618
+ ++ V K G SWIE++ + H+FV GD HP ++ + + + G+
Sbjct: 649 WKHMRANGVSKEVGCSWIELKNQYHVFVVGD-TMHPMIEETKDLVCLVSRQMIEEGFVTV 707
Query: 619 -DHSFVLHDVEEEEKTH 634
D SF VEEEE T
Sbjct: 708 LDSSF----VEEEEGTQ 720
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 243/497 (48%), Gaps = 58/497 (11%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
+ T I N +V+ + K G +A+A +F+A+ ++VVSW S++ GY Q G + +
Sbjct: 40 IIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSS 99
Query: 133 E---RLFWRMPEKNVVSWTVMLGGLLK-DSRVEDAR-------KLFDMMPVKDVVAVTNM 181
+LF M ++++ L G+ K +S ++ + + M D+ T++
Sbjct: 100 YTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL 159
Query: 182 IGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEV-MPERNEVS- 239
+G YC+ G +E+ +F MP+RN TW+TMVSGYA RV+ A K+F + + E+ E S
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 240 ----WTAMLMG-----YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
+TA+L Y GR + + + V N ++ + ++ A +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESLNEACKM 278
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
F+ +R+ TWSAM+ Y + G LEA+ LF+RM G +
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
+ G+Q+H+ L++ F++ L+ +AL+ MY K G L A+ F+ +DV +W S+I+GY
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI------------- 457
Q+ EEAL ++R M +G+ P+D + VL ACS ++ G+++
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 458 -----FESM--KCKYQVEPG-----------IEHYACMVDLLGRAGQVNDAVEIVEKM-- 497
+M KC +E G + + M+ L GQ ++A+E+ E+M
Sbjct: 459 PIGSALSTMYSKCG-SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 498 -PMEPDAIVWGSLLGAC 513
MEPD + + +++ AC
Sbjct: 518 EGMEPDDVTFVNIISAC 534
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
GR VH +++R+ + A+ L+ Y KCG L +A IFN KDVV WNS+ITGYSQ
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 413 HG---LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
+G + +FR+M + P+ + G+ A S GR+ ++ K
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA-HALVVKMSSFG 151
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
I +V + +AG V D +++ MP E + W +++ T +++ A
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEA 203
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T + YA+ G + +ARK FD R + W ++++ Y Q +A+ L+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQ--ERDVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 81 NIVSWNGMVSGFVK---NGMVAEARRVFDAMPVRN-----VVSWTSMVRGYVQEGNVEEA 132
I+ + ++ +K + E + +++ V +++ Y + G++E+
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEE 188
+F R P K+VVSW M+ GL + + ++A +LF+ M + D V N+I +
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 189 GRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFE 230
G +E F+ M + V + MV +R ++ A++ E
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 184/663 (27%), Positives = 326/663 (49%), Gaps = 63/663 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------ETTP 78
+S Y + G + +AR+VFD P R S+ +++ Y Q Q +A+ L+ + P
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 79 EK---------------------------------NIVSWNGMVSGFVKNGMVAEARRVF 105
++ ++++ N +++ +V+ +++A RVF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT-VMLGGLLKDSRV---E 161
+P+++++SW+S++ G+ Q G EA M V + G LK
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 162 DARKLFDMMPVKDVVAVTNMIGG------YCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
D + +K +A N I G Y G L AR +FD++ + + +W +++G
Sbjct: 287 DYGSQIHGLCIKSELA-GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 216 YARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKP 267
A N D A +F M + +S ++L T + + + + +
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD 405
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG-TWSAMIKVYERKGFELEALGLFARMQ 326
+ CN ++ + F D+ +FE R D +W+ ++ + +E L LF M
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML 465
Query: 327 REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
+ G QVH +++ + ++ + LI MY KCG L
Sbjct: 466 VSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
+A+ IF+ +DVV W+++I GY+Q G GEEAL +F++M +G+ P+ ++F+GVL+ACS
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 447 YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW 506
+ G V+EG +++ +M+ ++ + P EH +C+VDLL RAG++N+A +++M +EPD +VW
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 507 GSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
+LL AC+T + LA+ A E + +++P N+ +VLL M+AS G WE+ ++R +K
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 567 SVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHD 626
V K+PG SWIE+E K H+F D HPE+ I +L + + D +P H L
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIF-HPERDDIYTVLHNIWSQMLDEC-NPQHKKRLQF 763
Query: 627 VEE 629
+ E
Sbjct: 764 IHE 766
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 212/446 (47%), Gaps = 26/446 (5%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N ++S + K G + +AR VFD MP RN+VS+TS++ GY Q G EA RL+ +M ++++V
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 146 SWTVMLGGLLK----DSRVEDARKL----FDMMPVKDVVAVTNMIGGYCEEGRLEEARAL 197
G ++K S V ++L + ++A +I Y ++ +A +
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 198 FDEMPKRNVVTWTTMVSGYAR-NRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGR 252
F +P +++++W+++++G+++ + L E++ NE + + L + R
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 253 MREASEFFDAMPVKPVVACNEMIMG------FGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
S+ + +K +A N I G + G ++ A+ VF+++ D +W+ +I
Sbjct: 286 PDYGSQ-IHGLCIKSELAGNA-IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVII 343
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
G+ EA+ +F++M+ G + G Q+H+ +++ F
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRY-PLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
DL V ++L+TMY C DL +F + D V WN+++T QH E L +F+
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMKCKYQVEPGIEHYACMVDLLGRA 484
M +S PD I+ +L C +K G ++ S+K E I++ ++D+ +
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNG--LIDMYAKC 521
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLL 510
G + A I + M D + W +L+
Sbjct: 522 GSLGQARRIFDSMD-NRDVVSWSTLI 546
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 156/376 (41%), Gaps = 46/376 (12%)
Query: 186 CEEGR-LEEARALFDEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW 240
C R L + R + D + N + ++S Y + + AR++F+ MPERN VS+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 241 TAMLMGYTHSGRMREASEFF------DAMP--------VKPVVACNEMIMGFGFDGDVDR 286
T+++ GY+ +G+ EA + D +P +K + +++ +G V +
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK 196
Query: 287 -------------------------AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGL 321
A VF + +D +WS++I + + GFE EAL
Sbjct: 197 LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 322 FARMQREGA-ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
M G N D+G Q+H ++SE + +L MY
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 381 KCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIG 440
+CG L A+ +F++ D WN +I G + +G +EA++VF M SG PD IS
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
+L A + + +G +I S K+ + ++ + + + E
Sbjct: 377 LLCAQTKPMALSQGMQI-HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 501 PDAIVWGSLLGACRTH 516
D++ W ++L AC H
Sbjct: 436 ADSVSWNTILTACLQH 451
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
Q G I YA+ G + AR++FD +R SW+ ++ Y Q+ +A+ LF+
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMD--NRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 78 P----EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWT-----SMVRGYVQEGN 128
E N V++ G+++ G+V E +++ M + +S T +V + G
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 129 VEEAERLFWRMP-EKNVVSWTVMLGGLLKDSRVEDARK----LFDMMPVKDVVAVTNMIG 183
+ EAER M E +VV W +L V A+K + + P V +
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL-LCS 684
Query: 184 GYCEEGRLEEARALFDEMPKRNV 206
+ G E A L M K +V
Sbjct: 685 MHASSGNWENAALLRSSMKKHDV 707
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 280/512 (54%), Gaps = 10/512 (1%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP 171
N + ++ Y++ G +A ++F +M +N+ SW M+ G +K + AR +FD MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARK 227
+DVV+ M+ GY ++G L EA + E K N ++ +++ ++R++ + R+
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 228 LF-EVMPE---RNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGD 283
+V+ N V +++ Y G+M A FD M VK + +I G+ GD
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
++ A+ +F +M E++ +W+A+I Y R+G AL LF +M G
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVM 402
HG+++H ++R+ + V S+LI MY K G L ++ +F K D V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
WN+MI+ +QHGLG +AL + DM V P+ + + +L+ACS+SG V+EG FESM
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
++ + P EHYAC++DLLGRAG + + +E+MP EPD +W ++LG CR H +L
Sbjct: 441 VQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELG 500
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKK 582
+ A ++L +L+P+++ PY+LLS +YA G+WE VE +R +K R V K SWIE+EKK
Sbjct: 501 KKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKK 560
Query: 583 AHMFVGGD-NNCHPEQPIIMKMLERLDGLLRD 613
F D ++ H + I +L L ++ +
Sbjct: 561 VEAFTVSDGSHAHARKEEIYFILHNLAAVIEE 592
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 132/224 (58%), Gaps = 11/224 (4%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N ++ Y + +P A +F+ +N+ SWN MVSG+VK+GM+ AR VFD+MP R+VV
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 115 SWTSMVRGYVQEGNVEEA---ERLFWRMPEK-NVVSWTVMLGGLLKDSRVEDARKLFDMM 170
SW +MV GY Q+GN+ EA + F R K N S+ +L +K +++ R+ +
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 171 PV----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
V +VV ++I Y + G++E A+ FDEM +++ WTT++SGYA+ ++ A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 227 KLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFD---AMPVKP 267
KLF MPE+N VSWTA++ GY G A + F A+ VKP
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 161/324 (49%), Gaps = 23/324 (7%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S I Y + G+ +A KVFD+ H+ R SWN MV+ Y ++ +A +F++ PE+
Sbjct: 85 SNHLIGMYMKCGKPIDACKVFDQM-HL-RNLYSWNNMVSGYVKSGMLVRARVVFDSMPER 142
Query: 81 NIVSWNGMVSGFVKNGMVAEA-------RRV---FDAMPVRNVVSWTSMVRGYVQEGNVE 130
++VSWN MV G+ ++G + EA RR F+ ++ T+ V+ + N +
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL--TACVKSRQLQLNRQ 200
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGR 190
++ NVV ++ K ++E A++ FD M VKD+ T +I GY + G
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYAR----NRRVDVARKLFEVMPERNEVSWTAMLMG 246
+E A LF EMP++N V+WT +++GY R NR +D+ RK+ + + + ++++ L
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 247 YTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT- 301
+R E M V+P + + +I + G ++ ++ VF ++ D
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 302 WSAMIKVYERKGFELEALGLFARM 325
W+ MI + G +AL + M
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDM 404
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 264/518 (50%), Gaps = 51/518 (9%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP 171
NV + ++ +G+V + + L+ RM +V + L+K S A + + +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQ 892
Query: 172 VK--------DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVD 223
V T +I Y GR+ EAR +FDEMP+R+ + WTTMVS Y R +D
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 224 VARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGD 283
A L M E+NE + ++ GY G + +A F+ MPVK +++ MI G+ +
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 284 VDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXX 339
A AVF KM E D+ T S +I G LE
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV-LEI--------------------- 1050
Query: 340 XXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD 399
G++VH +++ F D+Y+ SAL+ MY KCG L RA +F P K+
Sbjct: 1051 -------------GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
+ WNS+I G + HG +EAL +F M + V P+ ++F+ V +AC+++G V EGR I+
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
Query: 460 SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
SM Y + +EHY MV L +AG + +A+E++ M EP+A++WG+LL CR H L
Sbjct: 1158 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 1217
Query: 520 DLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKL-PGYSWIE 578
+AE+A KL LEP N+G Y LL MYA + RW DV +R +++ + K+ PG S I
Sbjct: 1218 VIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIR 1277
Query: 579 VEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGY 616
++K+ H+F D + H + +L+ + + AGY
Sbjct: 1278 IDKRDHLFAAADKS-HSASDEVCLLLDEIYDQMGLAGY 1314
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 40/323 (12%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T I Y+ G+I ARKVFDE P R +W MV+AY + A +L EKN
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN 965
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+ N +++G++ G + +A +F+ MPV++++SWT+M++GY Q EA +F++M E
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 142 KNVVSWTVMLGGLLKDSR---VEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEE 193
+ ++ V + ++ V + K M ++ DV + ++ Y + G LE
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTH 249
A +F +PK+N+ W +++ G A + A K+F M + N V++ ++ TH
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTH 1145
Query: 250 SGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVY 309
+G + E + + MI + +V+ + M+ ++
Sbjct: 1146 AGLVDEGRRIYRS-----------MIDDYSIVSNVEH---------------YGGMVHLF 1179
Query: 310 ERKGFELEALGLFARMQREGAAL 332
+ G EAL L M+ E A+
Sbjct: 1180 SKAGLIYEALELIGNMEFEPNAV 1202
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 316/636 (49%), Gaps = 68/636 (10%)
Query: 25 ISRYARIGQIENARKVFDE------TPHIHRTTSSWNAMVA-AYFQAHQPHQAVTLFETT 77
+S Y+ G+ ++F E P+ + S+ A +Y + + A L +T
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
+ N +++ + + G + +A R+ M +VV+W S+++GYVQ +EA F
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 138 RM----------PEKNVVSWTVMLGGLLK-------------DSRVEDARKLFDMMPVKD 174
M ++++ + L LL DS ++ L DM +
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 175 VVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-EVMP 233
+ C GR F M +++++WTT+++GYA+N A +LF +V
Sbjct: 436 LT---------CYMGRA------FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC-------------NEMIMGFGF 280
+R E+ + G + AS +M + + C NE++ +G
Sbjct: 481 KRMEIDEMIL-------GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGK 533
Query: 281 DGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
++ A VFE ++ +D +W++MI G E EA+ LF RM G + +
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
+ GR++H L+R F + +A A++ MY CGDL AK +F+R K +
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
+ + SMI Y HG G+ A+ +F M V PD ISF+ +L ACS++G + EGR +
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD 520
M+ +Y++EP EHY C+VD+LGRA V +A E V+ M EP A VW +LL ACR+H + +
Sbjct: 714 MEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKE 773
Query: 521 LAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVE 580
+ E+A ++L +LEPKN G VL+S+++A +GRW DVE VR K+K + K PG SWIE++
Sbjct: 774 IGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Query: 581 KKAHMFVGGDNNCHPE-QPIIMKMLERLDGLLRDAG 615
K H F D + HPE + I K+ E L R+ G
Sbjct: 834 GKVHKFTARDKS-HPESKEIYEKLSEVTRKLEREKG 868
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 143/595 (24%), Positives = 241/595 (40%), Gaps = 117/595 (19%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-----ETTP---- 78
Y + G +++A KVFDE P RT +WN M+ AY +P A+ L+ E P
Sbjct: 126 YGKCGSLDDAEKVFDEMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 79 -----------EKNIVSW-------------------NGMVSGFVKNGMVAEARRVFDAM 108
++I S N +VS + KN ++ ARR+FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 109 PVR-NVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKN---VVSWTVMLGGL--LKDS 158
+ + V W S++ Y G E LF M P N +VS G K
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 159 RVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
+ A L ++ +I Y G++ +A + +M +VVTW +++ GY +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 219 NRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEM 274
N A + F M + +EVS T+++ SGR+ S M + V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRL---SNLLAGMELHAYV----- 412
Query: 275 IMGFGFDGDVDRAKAV----------------FEKMRERDDGTWSAMIKVYERKGFELEA 318
+ G+D ++ + F +M ++D +W+ +I Y + +EA
Sbjct: 413 -IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 471
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
L LF + ++ ++ +++H ++R D + + L+ +
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDV 530
Query: 379 YVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISF 438
Y KC ++ A +F KDVV W SMI+ + +G EA+ +FR M +G+ D ++
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 439 IGVLSACSYSGKVKEGREI----------------------------FESMKCKY-QVE- 468
+ +LSA + + +GREI +S K + ++E
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Query: 469 PGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLD 520
G+ Y M++ G G AVE+ +KM E PD I + +LL AC LD
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 204/472 (43%), Gaps = 24/472 (5%)
Query: 60 AYFQAHQPHQAVTLFETTPEKNIVSWNG-MVSGFVKNGMVAEARRVFDAMPVRNVVSWTS 118
A Q Q H + F+T P + G +V + K G + +A +VFD MP R +W +
Sbjct: 95 AVSQGRQLHSRI--FKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152
Query: 119 MVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD-SRVEDARKLFDMMPV----- 172
M+ YV G A L+W M + V LLK +++ D R ++ +
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 173 --KDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-NVVTWTTMVSGYARNRRVDVARKLF 229
V ++ Y + L AR LFD ++ + V W +++S Y+ + + +LF
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 230 EVM----PERNEVSWTAML-----MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGF 280
M P N + + L Y G+ AS + + CN +I +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 281 DGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
G + +A+ + +M D TW+++IK Y + EAL F+ M G +
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
G ++HA +++ +D +L V + LI MY KC F R KD+
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
+ W ++I GY+Q+ EAL +FRD+ + D++ +L A S + +EI
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+ K ++ I++ +VD+ G+ + A + E + + D + W S++ +
Sbjct: 513 ILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISS 561
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 351 DHGRQVHARLVRS--EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
GRQ+H+R+ ++ F+ D ++A L+ MY KCG L A+ +F+ P + WN+MI
Sbjct: 97 SQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIG 155
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM-KCKYQV 467
Y +G AL ++ +M + GVP SF +L AC+ ++ G E+ + K Y
Sbjct: 156 AYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHS 215
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
I + +V + + ++ A + + + DA++W S+L + T K L + +
Sbjct: 216 TGFIVN--ALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK-SLETLELF 272
Query: 528 KLAQLEPKNAGPYVLLSHMYASKG 551
+ + Y ++S + A G
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDG 296
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 291/559 (52%), Gaps = 18/559 (3%)
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+V WN ++S + K G + +A ++FD MP+R+V+S + G+++ E L RM
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 142 K---NVVSWTVMLGGLLKDSRVEDARKLFDMMPV-----KDVVAVTNMIGGYCEEGRLEE 193
+ + T++L + K+ + + K++ +I Y + G
Sbjct: 150 SGGFDHATLTIVLS-VCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTH 249
R +FD M RNV+T T ++SG N + +LF +M N V++ + L +
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 250 SGRMREASEFFDAM---PVKPVVACNEMIMG-FGFDGDVDRAKAVFEKMRERDDGTWSAM 305
S R+ E + + ++ + +M + G ++ A +FE E D+ + + +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 306 IKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF 365
+ + G E EA+ F RM + G ++ G+Q+H+ +++ +F
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 366 DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
+ +V + LI MY KCGDL ++ +F R P ++ V WNSMI +++HG G AL ++ +
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M V P D++F+ +L ACS+ G + +GRE+ MK + +EP EHY C++D+LGRAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 486 QVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSH 545
+ +A ++ +P++PD +W +LLGAC H ++ E A E+L Q P ++ ++L+++
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 546 MYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLE 605
+Y+S+G+W++ +++K V K G S IE+E K H FV D HP+ I +L
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED-KLHPQAEAIYDVLS 627
Query: 606 RLDGLLRDAGYSPDHSFVL 624
L ++ D GY PD F+L
Sbjct: 628 GLFPVMVDEGYRPDKRFIL 646
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 198/503 (39%), Gaps = 77/503 (15%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE--------- 75
+S YA+ G++ +A K+FDE P R S N + + + + L +
Sbjct: 97 LSLYAKCGKLVDAIKLFDEMPM--RDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFD 154
Query: 76 -----------TTPE------------------KNIVSWNGMVSGFVKNGMVAEARRVFD 106
TPE K I N +++ + K G R VFD
Sbjct: 155 HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFD 214
Query: 107 AMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVED 162
M RNV++ T+++ G ++ E+ RLF M N V++ L R+ +
Sbjct: 215 GMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 163 ARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
+++ ++ ++ + ++ Y + G +E+A +F+ + + V+ T ++ G A+
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 219 NRRVDVARKLFEVMPERN---EVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVA 270
N + A + F M + + + + ++G + + ++ +K
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
N +I + GD+ ++ VF +M +R+ +W++MI + R G L AL L+ M
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGR-------QVHARLVRSEFDQDLYVASALITMYVKCG 383
D GR +VH R+E + +I M + G
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH------YTCIIDMLGRAG 508
Query: 384 DLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG---LGEEALNVFRDMCLSGVPPDDISFI 439
L AK + PLK D +W +++ S HG +GE A + P + I
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYA----AEQLFQTAPDSSSAHI 564
Query: 440 GVLSACSYSGKVKEGREIFESMK 462
+ + S GK KE + + MK
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMK 587
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 299/607 (49%), Gaps = 71/607 (11%)
Query: 66 QPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQ 125
Q H + +F P+ + S ++S + + +A VFD + VRN S+ +++ Y
Sbjct: 43 QLHARIVVFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 126 EGNVEEAERLF--W----------RMPEKNVVSWTVM---------LGGLLKDSRVEDAR 164
+A LF W P+ +S + LG L + R
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
FD DV MI Y + +E AR +FDEM +R+VV+W +M+SGY+++ +
Sbjct: 161 GGFD----SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 225 ARKLFEVMP-----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMI 275
+K+++ M + N V+ ++ S + E M + CN +I
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 276 MGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ--------- 326
+ G +D A+A+F++M E+D T+ A+I Y G EA+ LF+ M+
Sbjct: 277 GFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 327 ----------------------REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE 364
R G+ N G+++HA +R+
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFR 424
D ++YV +++I Y K G L+ A+ +F+ + ++ W ++IT Y+ HG + A ++F
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 425 DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M G PDD++ VLSA ++SG + IF+SM KY +EPG+EHYACMV +L RA
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLS 544
G+++DA+E + KMP++P A VWG+LL L++A A ++L ++EP+N G Y +++
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMA 576
Query: 545 HMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKML 604
++Y GRWE+ E+VR K+K + K+PG SWIE EK F+ D++C + +M
Sbjct: 577 NLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSK----EMY 632
Query: 605 ERLDGLL 611
E ++GL+
Sbjct: 633 EIIEGLV 639
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 158/361 (43%), Gaps = 59/361 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQA----------------- 64
G I+ Y + IE+ARKVFDE R SWN+M++ Y Q+
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMS--ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 65 -HQPH--QAVTLFETTPEKNIVSW--------------------NGMVSGFVKNGMVAEA 101
+P+ +++F+ + + + + N ++ + K G + A
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
R +FD M ++ V++ +++ GY+ G V+EA LF M + +W M+ GL++++ E
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 162 DARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARAL----FDEMPKRNVVTWTTMV 213
+ F M + V +++++ L+ + + N+ T+++
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-VV 269
YA+ + A+++F+ +R+ ++WTA++ Y G A FD M KP V
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDD-----GTWSAMIKVYERKGFELEALGLFAR 324
++ F GD D A+ +F+ M + D ++ M+ V R G +A+ ++
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 325 M 325
M
Sbjct: 529 M 529
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 30/237 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----- 75
+T I YA++G + A++VFD R+ +W A++ AY A +LF+
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCK--DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 76 -TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNV 129
T P+ V+ ++S F +G A+ +FD+M + V + MV + G +
Sbjct: 462 GTKPDD--VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Query: 130 EEAERLFWRMPEKNVVS-WTVMLGGLLKDSRVEDAR----KLFDMMPVKDVVAVTNMIGG 184
+A +MP + W +L G +E AR +LF+M P ++ T M
Sbjct: 520 SDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP-ENTGNYTIMANL 578
Query: 185 YCEEGRLEEARALFDEMPKRNV-----VTWTTMVSGY----ARNRRVDVARKLFEVM 232
Y + GR EEA + ++M + + +W G A++ + +++++E++
Sbjct: 579 YTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEII 635
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 305/623 (48%), Gaps = 75/623 (12%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF--------ETTPE 79
YA G I ARK+F+E P + S+N ++ Y + H A+++F + P+
Sbjct: 59 YALCGHITYARKLFEEMPQ--SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPD 116
Query: 80 KNIVSWNGMVSGFVKN---GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
+ +G +K+ G+V R + + R+ +++ Y+ G VE A +F
Sbjct: 117 GYTYPFVAKAAGELKSMKLGLVVHGR-ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNM--IGGYC---E 187
M ++V+SW M+ G ++ + DA +FD M + V + +M + G+ E
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 188 EGR----LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
GR L E + L D++ +N +V+ Y + R+D AR +F+ M R+ ++WT M
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKN-----ALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 244 LMGYTHSGRMREASEFFDAMP---VKP--------VVACNE------------------- 273
+ GYT G + A E M V+P V C +
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 274 ---------MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
+I + VD VF + G WSA+I + +ALGLF R
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
M+RE N +H L ++ F L A+ L+ +Y KCG
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 385 LVRAKWIFN----RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIG 440
L A IFN ++ KDVV+W ++I+GY HG G AL VF +M SGV P++I+F
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
Query: 441 VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME 500
L+ACS+SG V+EG +F M Y+ HY C+VDLLGRAG++++A ++ +P E
Sbjct: 531 ALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE 590
Query: 501 PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVR 560
P + VWG+LL AC TH + L E+A KL +LEP+N G YVLL+++YA+ GRW+D+E VR
Sbjct: 591 PTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVR 650
Query: 561 EKIKTRSVIKLPGYSWIEVEKKA 583
++ + K PG+S IE+ +
Sbjct: 651 SMMENVGLRKKPGHSTIEIRSNS 673
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 153/370 (41%), Gaps = 65/370 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE-------TT 77
++ Y G++E AR VFD + R SWN M++ Y++ + A+ +F+
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKN--RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL 216
Query: 78 PEKNIVSW--------------------------------NGMVSGFVKNGMVAEARRVF 105
IVS N +V+ ++K G + EAR VF
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARK 165
D M R+V++WT M+ GY ++G+VE A L M + V V + L+ S DA K
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV--SVCGDALK 334
Query: 166 LFD----------MMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
+ D D++ T++I Y + R++ +F K + W+ +++G
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 216 YARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMP----VKP 267
+N V A LF+ M E N + ++L Y +R+A + +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 268 VVACNEMIMGFGFDGDVDRAKAVF----EKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
+ A ++ + G ++ A +F EK + +D W A+I Y G AL +F
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFM 514
Query: 324 RMQREGAALN 333
M R G N
Sbjct: 515 EMVRSGVTPN 524
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 212/750 (28%), Positives = 347/750 (46%), Gaps = 171/750 (22%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-------ETT 77
I+ Y+R G + ARKVF++ P R SW+ MV+A +++ +F + +
Sbjct: 86 INLYSRAGGMVYARKVFEKMPE--RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS 143
Query: 78 PEKNIVS--------------W---------------------NGMVSGFVKNGMVAEAR 102
P + I+S W ++ ++K+G + AR
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS---------------- 146
VFDA+P ++ V+WT+M+ G V+ G + +LF+++ E NVV
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 147 -----------------------WTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIG 183
V++ +K RV A KLF+ MP K++++ T ++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 184 GYCEEGRLEEARALFDEMPK----------RNVVT---------WTTMVSGYA------- 217
GY + +EA LF M K +++T + T V Y
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 218 ----RNRRVDV---------ARKLFEVMPERNEVSWTAMLMGYTHSG---RMREASEFFD 261
N +D+ ARK+F++ + V + AM+ GY+ G + EA F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 262 AMPVKPV-------------------VACNEMIMG----FGFDGDV-------------- 284
M + + + ++ I G +G + D+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 285 --DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
++ VF++M+ +D W++M Y ++ EAL LF +Q +
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
G++ H +L++ + + Y+ +AL+ MY KCG A F+ +DVV
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
WNS+I+ Y+ HG G++AL + M G+ P+ I+F+GVLSACS++G V++G + FE M
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM- 682
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
++ +EP EHY CMV LLGRAG++N A E++EKMP +P AIVW SLL C ++LA
Sbjct: 683 LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKK 582
E A E +PK++G + +LS++YASKG W + + VRE++K V+K PG SWI + K+
Sbjct: 743 EHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Query: 583 AHMFVGGD-NNCHPEQPIIMKMLERLDGLL 611
H+F+ D ++C Q + E LD LL
Sbjct: 803 VHIFLSKDKSHCKANQ-----IYEVLDDLL 827
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 30/452 (6%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF---WRMPEK 142
N +++ + + G + AR+VF+ MP RN+VSW++MV G EE+ +F WR +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 143 NVVSWTVMLGGLLKDSRVEDAR---KLFDMMPV-------KDVVAVTNMIGGYCEEGRLE 192
+ + +L ++ D R +F + +DV T +I Y ++G ++
Sbjct: 143 SPNEY--ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN---------EVSWTAM 243
AR +FD +P+++ VTWTTM+SG + R V+ +LF + E N V
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWS 303
++ + G+ A + + + N +I + G V A +F M ++ +W+
Sbjct: 261 ILPFLEGGKQIHAHILRYGLEMDASLM-NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWT 319
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
++ Y++ EA+ LF M + G + G QVHA +++
Sbjct: 320 TLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 379
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLG---EEAL 420
D YV ++LI MY KC L A+ +F+ + DVV++N+MI GYS+ G EAL
Sbjct: 380 NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
N+FRDM + P ++F+ +L A + + ++I + KY + I + ++D+
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI-HGLMFKYGLNLDIFAGSALIDV 498
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+ D+ + ++M ++ D ++W S+
Sbjct: 499 YSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
VH +++ + D Y+++ LI +Y + G +V A+ +F + P +++V W++M++ + HG+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 416 GEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREI---FESMKCKYQVEPGI 471
EE+L VF + + P++ + AC SG GR + +S K + +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
++D + G ++ A + + +P E + W +++ C +K+ + V+++ Q
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC---VKMGRSYVSLQLFYQ 239
Query: 532 LEPKNAGP--YVL 542
L N P Y+L
Sbjct: 240 LMEDNVVPDGYIL 252
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/608 (29%), Positives = 315/608 (51%), Gaps = 32/608 (5%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y + G +++A KVFDE P R +WNA++ Y Q + +A+ LF ++ +
Sbjct: 218 YGKCGVLDDASKVFDEIPD--RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 88 MVS---------GFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
VS G V+ G + A + + M + N++ TS++ Y + G +E AE +F R
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDR 334
Query: 139 MPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEA 194
M EK+VV+W +++ G ++ VEDA + +M ++ D V + ++ L+
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 195 RAL----FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHS 250
+ + + ++V +T++ YA+ + A+K+F+ E++ + W +L Y S
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES 454
Query: 251 GRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTW 302
G EA F M ++ V+ N +I+ +G VD AK +F +M+ + +W
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+ M+ + G EA+ +MQ G N GR +H ++R
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 363 S-EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALN 421
+ + + + ++L+ MY KCGD+ +A+ +F ++ + N+MI+ Y+ +G +EA+
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIA 634
Query: 422 VFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLL 481
++R + G+ PD+I+ VLSAC+++G + + EIF + K ++P +EHY MVDLL
Sbjct: 635 LYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL 694
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 541
AG+ A+ ++E+MP +PDA + SL+ +C K +L + KL + EP+N+G YV
Sbjct: 695 ASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYV 754
Query: 542 LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEV--EKKAHMFVGGDNNCHPEQPI 599
+S+ YA +G W++V +RE +K + + K PG SWI++ E+ H+FV D H
Sbjct: 755 TISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKT-HTRINE 813
Query: 600 IMKMLERL 607
I ML L
Sbjct: 814 IQMMLALL 821
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 209/433 (48%), Gaps = 22/433 (5%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGL 154
A +F + VRNV SW +++ + G E A F M P+ VV G
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 155 LKDSRVEDARKLFDMMP-VKDVVAVTNMIGG-YCEEGRLEEARALFDEMPKRNVVTWTTM 212
LK SR + + ++D V V + + Y + G L++A +FDE+P RN V W +
Sbjct: 186 LKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNAL 245
Query: 213 VSGYARNRRVDVARKLFEVM------PERNEVSW---TAMLMGYTHSGRMREASEFFDAM 263
+ GY +N + + A +LF M P R VS + MG G+ A + M
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGM 305
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
+ ++ ++ + G ++ A+ VF++M E+D TW+ +I Y ++G +A+ +
Sbjct: 306 ELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQ 364
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
M+ E + G++V +R F+ D+ +AS ++ MY KCG
Sbjct: 365 LMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
+V AK +F+ KD+++WN+++ Y++ GL EAL +F M L GVPP+ I++ ++
Sbjct: 425 SIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP---ME 500
+ +G+V E +++F M+ + P + + M++ + + G +A+ + KM +
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 501 PDAIVWGSLLGAC 513
P+A L AC
Sbjct: 544 PNAFSITVALSAC 556
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 49/392 (12%)
Query: 182 IGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNE 237
+ C+ G ++EA +L EM RN+ + ++ G R + +++ + +
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILK--- 98
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+G +E+ + V C+ + + A+ +F K+R R
Sbjct: 99 ------------NGDFYARNEYIETKLVIFYAKCDAL----------EIAEVLFSKLRVR 136
Query: 298 DDGTWSAMIKVYERKGF-ELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQV 356
+ +W+A+I V R G E +G ++ E NF GR V
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF-VVPNVCKACGALKWSRFGRGV 195
Query: 357 HARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLG 416
H +V+S + ++VAS+L MY KCG L A +F+ P ++ V WN+++ GY Q+G
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGRE-----IFESMKCKYQVEPGI 471
EEA+ +F DM GV P ++ LSA + G V+EG++ I M+ + +
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE--KL 529
++ C V L+ A V D + E D + W ++ +++ L E A+ +L
Sbjct: 316 LNFYCKVGLIEYAEMVFDRM-------FEKDVVTWNLIISG---YVQQGLVEDAIYMCQL 365
Query: 530 AQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
+LE K V L+ + ++ R E++++ +E
Sbjct: 366 MRLE-KLKYDCVTLATLMSAAARTENLKLGKE 396
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 141/329 (42%), Gaps = 58/329 (17%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAV---------- 71
T ++ Y ++G IE A VFD + +WN +++ Y Q A+
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 72 ---------TLFETTP--------------------EKNIVSWNGMVSGFVKNGMVAEAR 102
TL E +IV + ++ + K G + +A+
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDS 158
+VFD+ ++++ W +++ Y + G EA RLF+ M + NV++W +++ LL++
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 159 RVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWT 210
+V++A+ +F M + ++++ T M+ G + G EEA +M + N + T
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 211 TMVSGYARNRRVDVARK----LFEVMPERNEVSW-TAMLMGYTHSGRMREASEFFDAMPV 265
+S A + + R + + + VS T+++ Y G + +A + F +
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
+ N MI + G++ A A++ +
Sbjct: 611 SELPLSNAMISAYALYGNLKEAIALYRSL 639
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 295/572 (51%), Gaps = 25/572 (4%)
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
P+K+ + ++ + + G+V EAR +FD MP R+VV+WT+M+ GY A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 138 RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGG-YCEEG------- 189
M ++ L +LK R + + L V VV M G Y +
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCR--NMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 190 ---RLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-EVMPERNEVSWTAMLM 245
+E A +F ++ +N VTWTT+++G+ K++ +++ E EV+ + +
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 246 GYTHSGRMREAS--EFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERD 298
S + + + A +K N +M D G + AK F +M ++D
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
TW+ +I ER EAL +F R + +G N + G+Q+H
Sbjct: 279 LITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY-PLKDVVMWNSMITGYSQHGLGE 417
R+ R F++++ +A+ALI MY KCG++ ++ +F +++V W SM+ GY HG G
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 418 EALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
EA+ +F M SG+ PD I F+ VLSAC ++G V++G + F M+ +Y + P + Y C+
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL-AEVAVEKLAQLEPKN 536
VDLLGRAG++ +A E+VE+MP +PD WG++LGAC+ H L + +A K+ +L+PK
Sbjct: 458 VDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKM 517
Query: 537 AGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPE 596
G YV+LS++YA++G+W D VR+ ++ K G SWI VE + F D C P
Sbjct: 518 VGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMC-PN 576
Query: 597 QPIIMKMLERLDGLLRDAGYSPDHSFVLHDVE 628
+ +L L R+AGY P+ +++D E
Sbjct: 577 ASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 8/261 (3%)
Query: 255 EASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE 310
E+S+ + P KP ++A N +I+ + G V+ A+++F++M +RD W+AMI Y
Sbjct: 29 ESSQNTEYPPYKPKKHHILATN-LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYA 87
Query: 311 RKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLY 370
+ A F M ++G + N +G VH +V+ + LY
Sbjct: 88 SSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLY 147
Query: 371 VASALITMYVKCGDLVRAK-WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLS 429
V +A++ MY C + A IF +K+ V W ++ITG++ G G L +++ M L
Sbjct: 148 VDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE 207
Query: 430 GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVND 489
+ A + V G++I S+ K + + ++DL R G +++
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASV-IKRGFQSNLPVMNSILDLYCRCGYLSE 266
Query: 490 AVEIVEKMPMEPDAIVWGSLL 510
A +M + D I W +L+
Sbjct: 267 AKHYFHEME-DKDLITWNTLI 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 187/460 (40%), Gaps = 78/460 (16%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----- 75
+T I Y G +E AR +FDE P R +W AM+ Y ++ +A F
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMP--DRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 76 -TTPEK-------------NIVSWNGMVSG-----------FVKNGM----------VAE 100
T+P + ++++ +V G +V N M +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
A +F + V+N V+WT+++ G+ G+ +++ +M +N + ++ S
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 161 EDA-------------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV 207
D+ R +PV + +++ YC G L EA+ F EM ++++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPV-----MNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEF---- 259
TW T++S R+ + A +F+ + N ++T+++ + + +
Sbjct: 281 TWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 260 FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF-EKMRERDDGTWSAMIKVYERKGFELEA 318
F K V N +I + G++ ++ VF E + R+ +W++M+ Y G+ EA
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF----DQDLYVASA 374
+ LF +M G + + G + + ++ SE+ D+D+Y +
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVMESEYGINPDRDIY--NC 456
Query: 375 LITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQH 413
++ + + G + A + R P K D W +++ H
Sbjct: 457 VVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 257/489 (52%), Gaps = 20/489 (4%)
Query: 104 VFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-------PEKNVVSWTVMLGGLLK 156
VF+ +P W +++GY + E + RM P++ + +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 157 DSRVEDA------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
RV + R FD KDVV T+ + Y + L AR +F EMP+RN V+WT
Sbjct: 125 QVRVGSSVHGLVLRIGFD----KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
+V Y ++ ++ A+ +F++MPERN SW A++ G SG + A + FD MP + +++
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
MI G+ GD+ A+ +FE+ R D WSA+I Y + G EA +F+ M +
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR--SEFDQDLYVASALITMYVKCGDLVRA 388
+ + +V + L + ++F YV ALI M KCG + RA
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRA 359
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+F P +D+V + SM+ G + HG G EA+ +F M G+ PD+++F +L C S
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
V+EG FE M+ KY + +HY+C+V+LL R G++ +A E+++ MP E A WGS
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LLG C H ++AEV L +LEP++AG YVLLS++YA+ RW DV +R+K+ +
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 569 IKLPGYSWI 577
K+ G SWI
Sbjct: 540 TKICGRSWI 548
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 37/372 (9%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
+K++V V + K + AR+VF MP RN VSWT++V YV+ G +EEA+ +F
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 139 MPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF 198
MPE+N+ SW ++ GL+K + +A+KLFD MP +D+++ T+MI GY + G + AR LF
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 199 DEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMG------------ 246
+E +V W+ ++ GYA+N + + A K+F M +N +++G
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 247 -------YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
Y H + +S + + C G +DRA +FE+M +RD
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKC----------GHMDRAAKLFEEMPQRDL 371
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
++ +M++ G EA+ LF +M EG + + G + +
Sbjct: 372 VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR-YFE 430
Query: 360 LVRSEF----DQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG 414
L+R ++ D Y S ++ + + G L A + P + W S++ G S HG
Sbjct: 431 LMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Query: 415 LGEEALNVFRDM 426
E A V R +
Sbjct: 489 NTEIAEVVARHL 500
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 20/328 (6%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y + + +ARKVF E P R SW A+V AY ++ + +A ++F+ PE+N
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPE--RNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+ SWN +V G VK+G + A+++FD MP R+++S+TSM+ GY + G++ A LF
Sbjct: 207 LGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARG 266
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARAL 197
+V +W+ ++ G ++ + +A K+F M K+V + ++ + G E +
Sbjct: 267 VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKV 326
Query: 198 FDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
+ +R + ++ A+ +D A KLFE MP+R+ VS+ +M+ G G
Sbjct: 327 DSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 253 MREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER-----DDGTWS 303
EA F+ M V VA ++ G V+ FE MR++ +S
Sbjct: 387 GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYS 446
Query: 304 AMIKVYERKGFELEALGLFARMQREGAA 331
++ + R G EA L M E A
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 352 HGRQVHARLVRSEFDQDLYV-ASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
H Q+HAR++R +QD + + + + L + +F R P +WN +I GY
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 411 SQHGLGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
S L E +++ M +G+ PD+ +F V+ CS +G+V+ G + + + +
Sbjct: 85 SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV-HGLVLRIGFDK 143
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
+ VD G+ + A ++ +MP E +A+ W +L+ A ++K E A
Sbjct: 144 DVVVGTSFVDFYGKCKDLFSARKVFGEMP-ERNAVSWTALVVA---YVKSGELEEAKSMF 199
Query: 530 AQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
+ +N G + L G + + + +++ R +I
Sbjct: 200 DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 315/603 (52%), Gaps = 55/603 (9%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET 76
+ C S ++ YA+ + +A VF + H ++S+N MV Y ++ + A+ LF+
Sbjct: 77 YICNSV--LNMYAKCRLLADAESVFRD--HAKLDSASFNIMVDGYVRSRRLWDALKLFDV 132
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----------PVRNVVS--------W-- 116
PE++ VS+ ++ G+ +N +EA +F M + V+S W
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 117 -------------------TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD 157
T+++ Y +++A +LF MPE+N+V+W VML G K
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 158 SRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMV 213
+E A +LFD + KD+V+ MI G + +L+EA + EM K + V ++
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 214 SGYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
S AR+ +L + +R + ++ Y S ++ A + F+A +
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM-QRE 328
+ N +I GF +G V++A+ VF++ ++D +W+AMI Y + AL LF M
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
+ + G++ H L S + + +A+I MY KCG + A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 389 KWIFNR---YPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
IF++ + WN++I G + HG + AL+++ D+ + P+ I+F+GVLSAC
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
++G V+ G+ FESMK + +EP I+HY CMVDLLG+AG++ +A E+++KMP++ D ++
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 506 WGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKT 565
WG LL A RTH +++AE+A +LA ++P + G V+LS++YA GRWEDV +VRE+++T
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRT 672
Query: 566 RSV 568
R V
Sbjct: 673 RDV 675
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY----------------- 395
GRQ+H R+++S D + Y+ ++++ MY KC L A+ +F +
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 396 --------------PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
P + V + ++I GY+Q+ EA+ +FR+M G+ ++++ V
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
+SACS+ G + + R + +S+ K ++E + ++ + + DA ++ ++MP E
Sbjct: 180 ISACSHLGGIWDCR-MLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP-ER 237
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKN 536
+ + W +L + K L E A E Q+ K+
Sbjct: 238 NLVTWNVMLNG---YSKAGLIEQAEELFDQITEKD 269
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 282/533 (52%), Gaps = 30/533 (5%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW 147
+V+ + K G++ A VF R+V + +++ G+V G+ +A + M ++
Sbjct: 102 LVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPD 160
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPV----------KDVVAVTNMIGGYCEEGRLEEARAL 197
LLK S DA +L D+ V D + ++ Y + +E+A+ +
Sbjct: 161 KYTFPSLLKGS---DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 198 FDEMPKRN-VVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGR 252
FDE+P R+ V W +V+GY++ R + A +F M E + + T++L +T SG
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 253 MREASEFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
+ + VK +V N +I +G ++ A ++FE M ERD TW++++
Sbjct: 278 IDNGRSIH-GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF-- 365
V++ G L LF RM G + GR++H ++ S
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 366 --DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
+ ++ ++L+ MYVKCGDL A+ +F+ +KD WN MI GY GE AL++F
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
MC +GV PD+I+F+G+L ACS+SG + EGR M+ Y + P +HYAC++D+LGR
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGR 516
Query: 484 AGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 543
A ++ +A E+ P+ + +VW S+L +CR H DLA VA ++L +LEP++ G YVL+
Sbjct: 517 ADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLM 576
Query: 544 SHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPE 596
S++Y G++E+V VR+ ++ ++V K PG SWI ++ H F G N HPE
Sbjct: 577 SNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTG-NQTHPE 628
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 63/312 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
+G ++ Y++ +E+A+KVFDE P + WNA+V Y Q + A+ +F
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPD-RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 75 --------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
+T +IV N ++ + K+ + EA
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 103 RVFDAMPVRNVVSWTSM--VRGYV--QEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDS 158
+F+AM R++ +W S+ V Y +G + ER+ ++V+ T +L + +
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 159 RVEDARKLFDMMPVKDVVAV--------TNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
+ R++ M V ++ +++ Y + G L +AR +FD M ++ +W
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 211 TMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEF------- 259
M++GY ++A +F M + +E+++ +L +HSG + E F
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 260 FDAMPVKPVVAC 271
++ +P AC
Sbjct: 498 YNILPTSDHYAC 509
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 353 GRQVHARLVRSEF-DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
G+Q+H +VR F D ++L+ MY KCG + RA +F +DV +N++I+G+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFV 137
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+G +A+ +R+M +G+ PD +F +L S + ++ + +++ + K +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV-HGLAFKLGFDSDC 195
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
+ +V + V DA ++ +++P D+++W +L+ + + A + K+ +
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
N ++ +VK G + +AR VFD+M V++ SW M+ GY + E A +F M V
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVK 465
Query: 145 ---VSWTVML-----GGLLKDSR--VEDARKLFDMMPVKDVVA-VTNMIGGYCEEGRLEE 193
+++ +L G L + R + +++++P D A V +M+G +LEE
Sbjct: 466 PDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLG---RADKLEE 522
Query: 194 ARALFDEMPK-RNVVTWTTMVSGYARNRRVDVA----RKLFEVMPERNEVSWTAMLMGYT 248
A L P N V W +++S + D+A ++L E+ PE + M Y
Sbjct: 523 AYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCG-GYVLMSNVYV 581
Query: 249 HSGRMREASEFFDAM---PVKPVVACNEMIMGFG 279
+G+ E + DAM VK C+ +++ G
Sbjct: 582 EAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNG 615
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 275/544 (50%), Gaps = 20/544 (3%)
Query: 89 VSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT 148
V FVK V A +VF+ MP R+ +W +M+ G+ Q G+ ++A LF M + +
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 149 VMLGGLLKDSRVEDARKLFDMMPVKDV-------VAVTNM-IGGYCEEGRLEEARALFDE 200
V + L++ + E + KL + M + V V N I Y + G L+ A+ +F+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 201 MPK--RNVVTWTTMVSGYARNRRVDVARKLFEVMPE---RNEVSWTAMLMGYTHSGRMRE 255
+ + R VV+W +M Y+ A L+ +M + ++S L +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 256 ASEFFDAMPV-----KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE 310
+ + + + A N I + D A+ +F+ M R +W+ MI Y
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 311 RKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD-L 369
KG EAL LF M + G + + G+ + AR +D +
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 370 YVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLS 429
+ +ALI MY KCG + A+ IF+ P K VV W +MI GY+ +G+ EAL +F M
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 430 GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVND 489
P+ I+F+ VL AC++SG +++G E F MK Y + PG++HY+CMVDLLGR G++ +
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 490 AVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYAS 549
A+E++ M +PDA +WG+LL AC+ H + +AE A E L LEP+ A PYV ++++YA+
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 550 KGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDG 609
G W+ +R +K R++ K PG S I+V K H F G++ H E +I L L
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHG-HVENEVIYFTLNGLSL 632
Query: 610 LLRD 613
+D
Sbjct: 633 FAKD 636
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 21/429 (4%)
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKD 157
RR++ + +V +W +R V + E+ LF M E N ++ + +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 158 SRV---EDARKLFDMMPV-KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ V E P DV T + + + ++ A +F+ MP+R+ TW M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK------- 266
SG+ ++ D A LF M + +M S ++ + +AM
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 267 -PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT---WSAMIKVYERKGFELEALGLF 322
V N I +G GD+D AK VFE + +R D T W++M K Y G +A GL+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAI-DRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
M RE + GR +H+ + DQD+ + I+MY K
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
D A+ +F+ + V W MI+GY++ G +EAL +F M SG PD ++ + ++
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
S C G ++ G+ I + ++D+ + G +++A +I + P E
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKT 423
Query: 503 AIVWGSLLG 511
+ W +++
Sbjct: 424 VVTWTTMIA 432
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 153/343 (44%), Gaps = 62/343 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------ETTP 78
IS Y + G +++A+ VF+ RT SWN+M AY + A L+ E P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 79 E---------------------------------KNIVSWNGMVSGFVKNGMVAEARRVF 105
+ ++I + N +S + K+ AR +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVE 161
D M R VSWT M+ GY ++G+++EA LF M + ++V+ ++ G K +E
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 162 -----DARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
DAR +V+ +I Y + G + EAR +FD P++ VVTWTTM++GY
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 217 ARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPV 268
A N A KLF M + N +++ A+L HSG + + E+F M + P
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 269 V---ACNEMIMGFGFDGDVDRAKAVFEKMRERDD-GTWSAMIK 307
+ +C M+ G G ++ A + M + D G W A++
Sbjct: 495 LDHYSC--MVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLN 535
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 206/531 (38%), Gaps = 113/531 (21%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------E 75
T + + + ++ A KVF+ P R ++WNAM++ + Q+ +A +LF E
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPE--RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 76 TTPEK---------------------------------NIVSWNGMVSGFVKNGMVAEAR 102
TP+ + N +S + K G + A+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 103 RVFDAMPV--RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV---VSWTVMLGGLLKD 157
VF+A+ R VVSW SM + Y G +A L+ M + +S + L ++
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 158 SRVEDARKLFDMMPV-----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
+L + +D+ A+ I Y + AR LFD M R V+WT M
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 213 VSGYARNRRVDVARKLFEVMPERNE----VSWTAMLMGYTHSGRMREASEFFDA------ 262
+SGYA +D A LF M + E V+ +++ G G + E ++ DA
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL-ETGKWIDARADIYG 387
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
V+ CN +I + G + A+ +F+ E+ TW+ MI Y G LEAL LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
++M + ++ + A++
Sbjct: 448 SKM-----------------------------------IDLDYKPNHITFLAVLQACAHS 472
Query: 383 GDLVRA-------KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
G L + K ++N P D ++ M+ + G EEAL + R+M PD
Sbjct: 473 GSLEKGWEYFHIMKQVYNISPGLD--HYSCMVDLLGRKGKLEEALELIRNM---SAKPDA 527
Query: 436 ISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH-YACMVDLLGRAG 485
+ +L+AC VK + ES+ + +EP + Y M ++ AG
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESL---FNLEPQMAAPYVEMANIYAAAG 575
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
W+ I+ + +E+L LF M+R G N VHA L+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALN 421
+S F D++V +A + M+VKC + A +F R P +D WN+M++G+ Q G ++A +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 422 VFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLL 481
+FR+M L+ + PD ++ + ++ + S+ +K E ++ + V+ + +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIV-WGSLLGA 512
G+ G ++ A + E + +V W S+ A
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMP----V 110
NA++ Y + H+A +F+ TPEK +V+W M++G+ NG+ EA ++F M
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS-----WTVMLGGLLKDSRVEDARK 165
N +++ ++++ G++E+ F M + +S ++ M+ L + ++E+A +
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 166 LFDMMPVKDVVAVTNMIGGYCEEGR-----LEEARALFDEMPKRNVVTWTTMVSGYARNR 220
L M K + + C+ R + A +LF+ P+ + M + YA
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQM-AAPYVEMANIYAAAG 575
Query: 221 RVDVARKLFEVMPERN 236
D ++ +M +RN
Sbjct: 576 MWDGFARIRSIMKQRN 591
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 239/421 (56%), Gaps = 3/421 (0%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
+E A+K FD + K+ V+ +++ GY E G L+EAR +FD++P+++ V+W ++S YA+
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKK 214
Query: 220 RRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFG 279
+ A LF MP ++ SW ++ GY + M+ A +FDAMP K V+ MI G+
Sbjct: 215 GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYT 274
Query: 280 FDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXX 339
GDV A+ +F M ++D + AMI Y + G +AL LFA+M + +
Sbjct: 275 KLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITL 334
Query: 340 XXXXXXXXXXXD--HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL 397
+ G V + + D ++++LI +Y+K GD +A +F+
Sbjct: 335 SSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNK 394
Query: 398 KDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI 457
KD V +++MI G +G+ EA ++F M +PP+ ++F G+LSA S+SG V+EG +
Sbjct: 395 KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKC 454
Query: 458 FESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHM 517
F SMK + +EP +HY MVD+LGRAG++ +A E+++ MPM+P+A VWG+LL A H
Sbjct: 455 FNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHN 513
Query: 518 KLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
++ E+A +LE G L+ +Y+S GRW+D VR+ IK + + K G SW+
Sbjct: 514 NVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Query: 578 E 578
E
Sbjct: 574 E 574
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 163/319 (51%), Gaps = 16/319 (5%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG + Y+R+G IE A+K FD+ + T SWN+++ Y ++ + +A +F+ PEK+
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAE--KNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 200
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
VSWN ++S + K G + A +F AMP+++ SW ++ GYV ++ A F MP+
Sbjct: 201 AVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ 260
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
KN VSW M+ G K V+ A +LF +M KD + MI Y + G+ ++A LF +M
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 202 PKRNV------VTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSG 251
+RN +T +++VS ++ + + E +++ T+++ Y G
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Query: 252 RMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIK 307
+A + F + K V+ + MIMG G +G A ++F M E+ + T++ ++
Sbjct: 381 DFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLS 440
Query: 308 VYERKGFELEALGLFARMQ 326
Y G E F M+
Sbjct: 441 AYSHSGLVQEGYKCFNSMK 459
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/620 (29%), Positives = 303/620 (48%), Gaps = 36/620 (5%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----TT 77
T I+ A+ G+I +AR+VFD P + T +WN M+ +Y + +A+ LF +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELD--TVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFD---------AMPVRNVVSWTSMVRGYVQEGN 128
+ + S+ ++S G V R++ ++PV N S++ Y + +
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNN-----SLIDMYGKCSD 120
Query: 129 VEEAERLFWRM--PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC 186
A ++F M +N V+W +L + + E A +F MP + A MI G+
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 187 EEGRLEEARALFDEMP----KRNVVTWTTMVSG-YARNRRVDVARKLFEVMPERNEVSW- 240
G+LE +LF EM K + T++++++ A + V R + VM + S
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 241 ---TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
++L YT G +A +++ V V+ N +I G+ ++A VF E+
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVH 357
+ TW+ MI Y R G +AL F M + G + HG+ +H
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 358 ARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGE 417
L+ F YV +AL+ +Y KCGD+ A F KD+V WN+M+ + HGL +
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD 420
Query: 418 EALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
+AL ++ +M SG+ PD+++FIG+L+ CS+SG V+EG IFESM Y++ ++H CM
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCM 480
Query: 478 VDLLGRAGQVNDAVEIVEKMPM----EPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE 533
+D+ GR G + +A ++ + W +LLGAC TH +L + L E
Sbjct: 481 IDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAE 540
Query: 534 PKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNC 593
P +VLLS++Y S GRW++ E VR ++ R + K PG SWIEV + FV GD++
Sbjct: 541 PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSS- 599
Query: 594 HPEQPIIMKMLERLDGLLRD 613
HP + + L L +R+
Sbjct: 600 HPRLEELSETLNCLQHEMRN 619
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 184/666 (27%), Positives = 321/666 (48%), Gaps = 81/666 (12%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+ Y + G + A +FDE P R + SWN M++ Y + A LF T +++
Sbjct: 42 LDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSCGKLEDAWCLF-TCMKRSGSD 98
Query: 85 WNGMVSGFVKNGMVAEARRVFD------AMPVR-----NVVSWTSMVRGYVQEGNVEEAE 133
+G + G+ + R FD + ++ NV +S+V Y + VE+A
Sbjct: 99 VDGYSFSRLLKGIASVKR--FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAF 156
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-------------------- 173
F + E N VSW ++ G ++ ++ A L +M +K
Sbjct: 157 EAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDP 216
Query: 174 --------------------DVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTM 212
++ MI Y + G + +A+ +FD + +++++W +M
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS--------EFFDAMP 264
++G++++ + A +LF M W + YT++G + S + M
Sbjct: 277 IAGFSKHELKESAFELFIQMQRH----WVETDI-YTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 265 VKP-----VVACNEMI-MGFGF-DGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELE 317
+K A N +I M F G ++ A ++FE ++ +D +W+++I + +KG +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 318 ALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
A+ F+ ++ ++ G+Q+HA +S F + +V S+LI
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 378 MYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
MY KCG + A+ F + K V WN+MI GY+QHGLG+ +L++F MC V D +
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHV 511
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
+F +L+ACS++G ++EG E+ M+ Y+++P +EHYA VDLLGRAG VN A E++E
Sbjct: 512 TFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIES 571
Query: 497 MPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDV 556
MP+ PD +V + LG CR ++++A L ++EP++ YV LSHMY+ +WE+
Sbjct: 572 MPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEK 631
Query: 557 EVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNN---CHPEQPIIMKMLERLDGLLRD 613
V++ +K R V K+PG+SWIE+ + F D + C +I + + + L D
Sbjct: 632 ASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDSD 691
Query: 614 AGYSPD 619
G D
Sbjct: 692 NGVDAD 697
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 221/479 (46%), Gaps = 40/479 (8%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PE 141
N ++ ++K G + A +FD MP R+ VSW +M+ GY G +E+A LF M +
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARA 196
+ S++ +L G+ R + ++ ++ +K +V ++++ Y + R+E+A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLV-IKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTA-------------- 242
F E+ + N V+W +++G+ + R + A L +M + V+ A
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 243 --MLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM-RERDD 299
L+ H+ ++ + + CN MI + G V AK VF+ + +D
Sbjct: 218 FCNLLKQVHAKVLKLGLQ-------HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
+W++MI + + + A LF +MQR + G+ +H
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 360 LVRSEFDQDLYVASALITMYVK--CGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGE 417
+++ +Q +ALI+MY++ G + A +F KD++ WNS+ITG++Q GL E
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSE 390
Query: 418 EALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
+A+ F + S + DD +F +L +CS ++ G++I ++ K + +
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSL 449
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKN 536
+ + + G + A + +++ + + W +++ H L +V+++ +Q+ +N
Sbjct: 450 IVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH---GLGQVSLDLFSQMCNQN 505
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 24/357 (6%)
Query: 171 PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFE 230
+ D+ ++ Y + G L A LFDEMPKR+ V+W TM+SGY +++ A LF
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 231 VM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACN-----EMIMGFGFD 281
M + + S++ +L G R + E + +K CN ++ +
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRF-DLGEQVHGLVIKGGYECNVYVGSSLVDMYAKC 149
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA-ALNFPXXXXX 340
V+ A F+++ E + +W+A+I + + A L M+ + A ++
Sbjct: 150 ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPL 209
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY-PLKD 399
+ +QVHA++++ ++ + +A+I+ Y CG + AK +F+ KD
Sbjct: 210 LTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
++ WNSMI G+S+H L E A +F M V D ++ G+LSACS E +IF
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS-----GEEHQIFG 324
Query: 460 SMKCKYQVEPGIEHYACMVDLLGR------AGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++ G+E + L G + DA+ + E + D I W S++
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSII 380
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
H ++ D+YV++ ++ Y+K G L A +F+ P +D V WN+MI+GY+ G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 416 GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA 475
E+A +F M SG D SF +L + + G ++ + K E + +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYVGS 140
Query: 476 CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+VD+ + +V DA E +++ EP+++ W +L+
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 274/522 (52%), Gaps = 15/522 (2%)
Query: 98 VAEARRVFDAMPVRNVVSWT-SMVRGYVQEGNVEEAERLFWRMPEKNVV-----SWTVML 151
+ AR++FD P R+ + SM++ Y++ ++ L+ + ++ ++T +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 152 GGLLKDSRVEDARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV 207
V +L + D+ T ++ Y + G++ AR FDEMP R+ V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMPE-RNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
+WT ++SGY R +D+A KLF+ MP ++ V + AM+ G+ SG M A FD M K
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 267 PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ 326
V+ MI G+ D+D A+ +F+ M ER+ +W+ MI Y + E + LF MQ
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 327 REGAA-LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
+ + G H + R + D+ + V +A++ MY KCG++
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 386 VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
+AK IF+ P K V WN+MI GY+ +G AL++F M + PD+I+ + V++AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITAC 384
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
++ G V+EGR+ F M+ + + IEHY CMVDLLGRAG + +A +++ MP EP+ I+
Sbjct: 385 NHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 506 WGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKT 565
S L AC + ++ AE ++K +LEP+N G YVLL ++YA+ RW+D +V+ ++
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 566 RSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERL 607
K G S IE+ F+ GD HP + I +L L
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTT-HPHRRSIHLVLGDL 544
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 145/287 (50%), Gaps = 46/287 (16%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE- 79
STG + YA+ G++ AR FDE PH R+ SW A+++ Y + + A LF+ P
Sbjct: 116 STGVVDMYAKFGKMGCARNAFDEMPH--RSEVSWTALISGYIRCGELDLASKLFDQMPHV 173
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
K++V +N M+ GFVK+G + ARR+FD M + V++WT+M+ GY +++ A +LF M
Sbjct: 174 KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV--------------------------- 172
PE+N+VSW M+GG ++ + ++ +LF M
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 173 -------------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
K V T ++ Y + G +E+A+ +FDEMP++ V +W M+ GYA N
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 220 RRVDVARKLFEVM---PERNEVSWTAMLMGYTHSGRMREASEFFDAM 263
A LF M + +E++ A++ H G + E ++F M
Sbjct: 354 GNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM 400
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 56/262 (21%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE---- 75
T T I Y I I+ ARK+FD P R SWN M+ Y Q QP + + LF+
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMP--ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
Query: 76 TTP------------------------------------EKNIVSWNGMVSGFVKNGMVA 99
TT +K + ++ + K G +
Sbjct: 267 TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIE 326
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM---PEKNVVSWTVMLGGLLK 156
+A+R+FD MP + V SW +M+ GY GN A LF M + + ++ ++
Sbjct: 327 KAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNH 386
Query: 157 DSRVEDARKLFDMM-------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVT 208
VE+ RK F +M ++ + +++G G L+EA L MP + N +
Sbjct: 387 GGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLG---RAGSLKEAEDLITNMPFEPNGII 443
Query: 209 WTTMVSGYARNRRVDVARKLFE 230
++ +S + + ++ A ++ +
Sbjct: 444 LSSFLSACGQYKDIERAERILK 465
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/636 (28%), Positives = 302/636 (47%), Gaps = 70/636 (11%)
Query: 32 GQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET--------TPEKNIV 83
G + AR+VFD+ PH SW +++ Y A+ +A+ LF +P+ +++
Sbjct: 54 GNLRAARQVFDKMPH--GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 84 S---------------------------------WNGMVSGFVKNGMVAEARRVFDAMPV 110
S + ++ + + G + ++ RVF MP
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDS----RVEDARKL 166
RN V+WT+++ G V G +E F M +S T LK +V+ + +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 167 FDMMPVKDVVA---VTNMIGG-YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR---- 218
+ V+ V V N + Y E G +++ LF+ M +R+VV+WT+++ Y R
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 219 NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF---------DAMPVKPVV 269
+ V+ K+ NE ++ +M R+ + D++ V
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS--- 348
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
N M+ + G++ A +F+ MR RD +WS +I Y + GF E F+ M++ G
Sbjct: 349 --NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ GRQVHA + +Q+ V S+LI MY KCG + A
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
IF D+V +MI GY++HG +EA+++F G PD ++FI VL+AC++SG
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
++ G F M+ Y + P EHY CMVDLL RAG+++DA +++ +M + D +VW +L
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L AC+ ++ A E++ +L+P A V L+++Y+S G E+ VR+ +K + VI
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLE 605
K PG+S I+++ FV GD HP+ I +LE
Sbjct: 647 KEPGWSSIKIKDCVSAFVSGD-RFHPQSEDIYNILE 681
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 223/517 (43%), Gaps = 69/517 (13%)
Query: 70 AVTLFETTPEKNIVSW----------NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSM 119
+++L + E+NIV N + + G + AR+VFD MP ++VSWTS+
Sbjct: 18 SISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSI 77
Query: 120 VRGYVQEGNVEEAERLFWRM--------PEKNVVSWTVMLGGLLKDSRVEDARKL----F 167
++ YV N +EA LF M P+ +V+S V+L + S + L
Sbjct: 78 IKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS--VVLKACGQSSNIAYGESLHAYAV 135
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
+ V ++++ Y G+++++ +F EMP RN VTWT +++G R
Sbjct: 136 KTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLT 195
Query: 228 LFEVMPERNEVSWT-AMLMGYTHSGRMREASEFFDAMPVKPVV--------ACNEMIMGF 278
F M E+S T + +R+ ++ A+ +V N + +
Sbjct: 196 YFSEMSRSEELSDTYTFAIALKACAGLRQV-KYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 279 GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
G++ +FE M ERD +W+++I Y+R G E++A+ F +M+ N
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
G Q+H ++ + L V+++++ MY CG+LV A +F +
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D++ W+++I GY Q G GEE F M SG P D + +LS ++ GR++
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH 434
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQV------------------------------- 487
C + +E + ++++ + G +
Sbjct: 435 ALALC-FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 488 NDAVEIVE---KMPMEPDAIVWGSLLGACRTHMKLDL 521
+A+++ E K+ PD++ + S+L AC +LDL
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 249/455 (54%), Gaps = 17/455 (3%)
Query: 175 VVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFE 230
V+ T+ I GRL EA F +M + N +T+ ++SG + L +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGD--FTSGSEALGD 93
Query: 231 VMP--------ERNEV-SWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD 281
++ +RN V TA++ Y+ GR ++A FD M K V N MI G+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
G VD A +F+KM ERD +W+AMI + +KG++ EAL F MQ G ++
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 342 XXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV 401
G VH ++ +F ++ V+++LI +Y +CG + A+ +F + VV
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
WNS+I G++ +G E+L FR M G PD ++F G L+ACS+ G V+EG F+ M
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 462 KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH-MKLD 520
KC Y++ P IEHY C+VDL RAG++ DA+++V+ MPM+P+ +V GSLL AC H +
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIV 393
Query: 521 LAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVE 580
LAE ++ L L K+ YV+LS+MYA+ G+WE +R K+K + K PG+S IE++
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 581 KKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAG 615
H+F+ GD N H E I ++LE + LR G
Sbjct: 454 DCMHVFMAGD-NAHVETTYIREVLELISSDLRLQG 487
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 157/357 (43%), Gaps = 58/357 (16%)
Query: 113 VVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFD 168
VSWTS + + G + EA + F M E N +++ +L G + +A L D
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA--LGD 93
Query: 169 MM---------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
++ V+ T +IG Y + GR ++AR +FD M +N VTW TM+ GY R+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 220 RRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP--------V 268
+VD A K+F+ MPER+ +SWTAM+ G+ G EA +F M VKP +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 269 VACNEM-IMGFGF---------------------------DGDVDRAKAVFEKMRERDDG 300
AC + + FG G V+ A+ VF M +R
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
+W+++I + G E+L F +MQ +G + + G + + ++
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQI 332
Query: 361 VRSEFDQDLYVA--SALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG 414
++ ++ + L+ +Y + G L A + P+K + V+ S++ S HG
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 56 AMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVS 115
A++ Y + + +A +F+ +KN V+WN M+ G++++G V A ++FD MP R+++S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 116 WTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDA-------RKLFD 168
WT+M+ G+V++G EEA F M V V + L A +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 169 MMPVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
K+ V V+N +I YC G +E AR +F M KR VV+W +++ G+A N +
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 228 LFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
F M E+ + V++T L +H G + E +F M
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 87 GMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS 146
++ + K G +AR VFD M +N V+W +M+ GY++ G V+ A ++F +MPE++++S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 147 WTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEA----RALF 198
WT M+ G +K E+A F M + D VA+ + G L R +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 199 DEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASE 258
+ K NV +++ Y R V+ AR++F M +R VSW ++++G+ +G E+
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 259 FFDAMPVK 266
+F M K
Sbjct: 294 YFRKMQEK 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 130/273 (47%), Gaps = 23/273 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T I Y++ G+ + AR VFD + + +WN M+ Y ++ Q A +F+ PE++
Sbjct: 113 TAIIGMYSKRGRFKKARLVFDYMED--KNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERD 170
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV-SWTSMVRGYVQEGNVEEAERLFW--- 137
++SW M++GFVK G EA F M + V + +++ N+ W
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 138 ----RMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
+ + NV ++ + VE AR++F M + VV+ ++I G+ G E
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHE 290
Query: 194 ARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----WTAML 244
+ F +M ++ + VT+T ++ + V+ + F++M +S + ++
Sbjct: 291 SLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLV 350
Query: 245 MGYTHSGRMREASEFFDAMPVKPVVACNEMIMG 277
Y+ +GR+ +A + +MP+KP NE+++G
Sbjct: 351 DLYSRAGRLEDALKLVQSMPMKP----NEVVIG 379
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 299/559 (53%), Gaps = 33/559 (5%)
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR- 138
K++ + +S + + G + +RRVFD+ RN+ W +M+ YVQ + E+ LF
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 139 MPEKNVVS----WTVMLGGLLKDSRVEDARKL-------FDMMPVKDVVAVTNMIGGYCE 187
+ K +VS + + + +VE R+ F +P+ V V +++ Y
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI---VIVNSLMVMYSR 365
Query: 188 EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAM 243
G + ++ +F M +R+VV+W TM+S + +N D L M ++ + ++ TA+
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEM----IMGFGFDGDVDRAKAVFEK--MRER 297
L ++ R +E + A ++ + M I + G + ++ +FE ER
Sbjct: 426 LSAASNL-RNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVH 357
D TW++MI Y + G + +F +M + N D G+Q+H
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 358 ARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGE 417
+R DQ+++VASAL+ MY K G + A+ +F++ ++ V + +MI GY QHG+GE
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 418 EALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
A+++F M SG+ PD I+F+ VLSACSYSG + EG +IFE M+ Y ++P EHY C+
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPD-AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP-K 535
D+LGR G+VN+A E V+ + E + A +WGSLLG+C+ H +L+LAE E+LA+ + K
Sbjct: 665 TDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGK 724
Query: 536 NAGPY-VLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCH 594
N Y VLLS+MYA + +W+ V+ VR ++ + + K G S IE+ + FV D
Sbjct: 725 NFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQ--- 781
Query: 595 PEQPIIMKMLERLDGLLRD 613
E P ++ + +DGL +D
Sbjct: 782 -EHPHSSEIYDVIDGLAKD 799
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 249/556 (44%), Gaps = 76/556 (13%)
Query: 26 SRYARIGQIEN---ARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----ETTP 78
SR ++I Q N AR++FD P TT WN ++ + + PH+A+ + +T P
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPK--PTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAP 101
Query: 79 EKNIVSW-------------------------------------NGMVSGFVKNGMVAEA 101
N ++ N +++ +V +
Sbjct: 102 FTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDC 161
Query: 102 ------RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVML 151
R+VFD M +NVV+W +++ YV+ G EA R F M V VS+ +
Sbjct: 162 FEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVF 221
Query: 152 GGLLKDSRVEDARKLFDMMP------VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN 205
+ ++ A + +M VKD+ V++ I Y E G +E +R +FD +RN
Sbjct: 222 PAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN 281
Query: 206 VVTWTTMVSGYARNRRVDVARKLF-EVMPERNEVS--WTAMLMGYTHSGRMR-EASEFFD 261
+ W TM+ Y +N + + +LF E + + VS T +L S + E F
Sbjct: 282 IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 262 AMPVK-----PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFEL 316
K P+V N +++ + G V ++ VF MRERD +W+ MI + + G +
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
E L L MQ++G +++ + G+Q HA L+R Q + S LI
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-QFEGMNSYLI 460
Query: 377 TMYVKCGDLVRAKWIF--NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
MY K G + ++ +F + Y +D WNSMI+GY+Q+G E+ VFR M + P+
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
++ +L ACS G V G+++ + ++ + + +VD+ +AG + A ++
Sbjct: 521 AVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 495 EKMPMEPDAIVWGSLL 510
+ E +++ + +++
Sbjct: 580 SQTK-ERNSVTYTTMI 594
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 158/370 (42%), Gaps = 69/370 (18%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-ETTPEK 80
+ AIS YA +G IE++R+VFD + R WN M+ Y Q +++ LF E K
Sbjct: 255 SSAISMYAELGDIESSRRVFDSC--VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 81 NIVS-----------------------WNGMVSG----------------FVKNGMVAEA 101
IVS ++G VS + + G V ++
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKD 157
VF +M R+VVSW +M+ +VQ G +E L + M ++ + ++ T +L +
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA-ASN 431
Query: 158 SRVEDARKLFDMMPVKDVVAVTNM----IGGYCEEGRLEEARALFD--EMPKRNVVTWTT 211
R ++ K ++ + M I Y + G + ++ LF+ +R+ TW +
Sbjct: 432 LRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 212 MVSGYARNRRVD----VARKLFEVMPERNEVSWTAMLMGYTHSGRMR--------EASEF 259
M+SGY +N + V RK+ E N V+ ++L + G + ++
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 260 FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
D + V + ++ + G + A+ +F + +ER+ T++ MI Y + G A+
Sbjct: 552 LD----QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAI 607
Query: 320 GLFARMQREG 329
LF MQ G
Sbjct: 608 SLFLSMQESG 617
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 162/361 (44%), Gaps = 33/361 (9%)
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN 236
++ + + C++G + AR LFD +PK V W T++ G+ N A + M +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 237 EVSWTAMLMGYTHSGRMREASEFFDAMPVKPV-------------VACNEMIMGF----- 278
+ YT+S ++ +E + K V V N ++ +
Sbjct: 101 PFTNCD---AYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 279 ---GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA---LGLFARMQREGAAL 332
F+ DV R VF+ MR ++ W+ +I Y + G EA G+ RM+ + + +
Sbjct: 158 APDCFEYDVVRK--VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV 215
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
+F + + +L E+ +DL+V S+ I+MY + GD+ ++ +F
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKL-GDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKV 451
+ +++ +WN+MI Y Q+ E++ +F + S + D+++++ SA S +V
Sbjct: 275 DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQV 334
Query: 452 KEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLG 511
+ GR+ + ++ P + + MV + R G V+ + + M E D + W +++
Sbjct: 335 ELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM-RERDVVSWNTMIS 392
Query: 512 A 512
A
Sbjct: 393 A 393
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 52/294 (17%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV---------- 104
N+++ Y + H++ +F + E+++VSWN M+S FV+NG+ E +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 105 FDAMPVRNVVSWTSMVRG----------------------------YVQEGNVEEAERLF 136
D + V ++S S +R Y + G + +++LF
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLF 476
Query: 137 --WRMPEKNVVSWTVMLGGLLKDSRVEDA----RKLFDMMPVKDVVAVTNMIGGYCEEGR 190
E++ +W M+ G ++ E RK+ + + V V +++ + G
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 191 LEEARAL----FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMG 246
++ + L + +NV + +V Y++ + A +F ERN V++T M++G
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 247 YTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRE 296
Y G A F +M +KP + ++ + G +D +FE+MRE
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 130/301 (43%), Gaps = 42/301 (13%)
Query: 15 VRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF 74
++F+ ++ I Y++ G I ++K+F+ + + R ++WN+M++ Y Q + +F
Sbjct: 450 IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 75 ETTPEKNI----VSWNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQ 125
E+NI V+ ++ + G V +++ +R NV +++V Y +
Sbjct: 510 RKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYSK 568
Query: 126 EGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNM 181
G ++ AE +F + E+N V++T M+ G + E A LF M D + +
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 182 IGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWT 241
+ G ++E +F+EM R+++ + P
Sbjct: 629 LSACSYSGLIDEGLKIFEEM------------------------REVYNIQPSSEHYCCI 664
Query: 242 AMLMGYTHSGRMREASEFFDAMPVKPVVA--CNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
++G GR+ EA EF + + +A ++ G+++ A+ V E++ + D
Sbjct: 665 TDMLG--RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDK 722
Query: 300 G 300
G
Sbjct: 723 G 723
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 284/549 (51%), Gaps = 34/549 (6%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------ 139
+ ++ ++K G + EA R+FD + ++V+W+SMV G+ + G+ +A F RM
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 140 -PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARA 196
P++ + V L +SR+ F + D+ V +++ Y + +EA
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMG------ 246
LF + +++V++W+T+++ Y +N A +F M E N + +L
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 247 -----YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT 301
TH +R+ E VK A +M M + A AVF ++ +D +
Sbjct: 280 LEQGRKTHELAIRKGLE----TEVKVSTALVDMYMKCF---SPEEAYAVFSRIPRKDVVS 332
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARL 360
W A+I + G ++ F+ M E + + + H+ +
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
++ FD + ++ ++L+ +Y +CG L A +FN LKD V+W S+ITGY HG G +AL
Sbjct: 393 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 452
Query: 421 NVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD 479
F M S V P++++F+ +LSACS++G + EG IF+ M Y++ P +EHYA +VD
Sbjct: 453 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVD 512
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
LLGR G ++ A+EI ++MP P + G+LLGACR H ++AE +KL +LE +AG
Sbjct: 513 LLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGY 572
Query: 540 YVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPI 599
Y+L+S++Y KG WE+VE +R +K R + K S IE+ +K H FV D+ HPE+
Sbjct: 573 YMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFV-ADDELHPEKEP 631
Query: 600 IMKMLERLD 608
+ +L+ LD
Sbjct: 632 VYGLLKELD 640
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 207/444 (46%), Gaps = 33/444 (7%)
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGG 153
+AR++F M R++ W ++++ +E EE F M P+ + + G
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 154 LLKDSRVEDARKLF---DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
L++ + F D+ D+ +++I Y + GR+ EA +FDE+ K ++VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 211 TMVSGYARN----RRVDVARKLF---EVMPER-NEVSWTAMLMGYTHSGRMREASEFF-- 260
+MVSG+ +N + V+ R++ +V P+R ++ + ++S R F
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 261 -----DAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFE 315
D V ++ C F A +F+ + E+D +WS +I Y + G
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAF------KEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 316 LEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
EAL +F M +G N + GR+ H +R + ++ V++AL
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPD 434
+ MY+KC A +F+R P KDVV W ++I+G++ +G+ ++ F M L + PD
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
I + VL +CS G +++ + F S KY + A +V+L R G + +A ++
Sbjct: 366 AILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 495 EKMPMEPDAIVWGSLLGACRTHMK 518
+ ++ D +VW SL+ H K
Sbjct: 425 NGIALK-DTVVWTSLITGYGIHGK 447
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 16/246 (6%)
Query: 276 MGF--GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
MGF F VD A+ +F +M +R W+ ++K R+ E L F+ M R+ +
Sbjct: 1 MGFCRKFSSSVD-ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPD 59
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIF 392
++G +H + + DLYV S+LI MY+KCG ++ A +F
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGKV 451
+ D+V W+SM++G+ ++G +A+ FR M + S V PD ++ I ++SAC+
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 452 KEGREIFESMKCKYQVEPGIEHYACMVDLL----GRAGQVNDAVEIVEKMPMEPDAIVWG 507
+ GR + + + G + +V+ L ++ +AV + KM E D I W
Sbjct: 180 RLGRCVH-----GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWS 233
Query: 508 SLLGAC 513
+++ AC
Sbjct: 234 TVI-AC 238
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 48/268 (17%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------ 108
N+++ Y ++ +AV LF+ EK+++SW+ +++ +V+NG AEA VF+ M
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 109 ----------------------------PVRN-----VVSWTSMVRGYVQEGNVEEAERL 135
+R V T++V Y++ + EEA +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 136 FWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGR 190
F R+P K+VVSW ++ G + + + F +M ++ D + + ++G E G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 191 LEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMG 246
LE+A+ + K N ++V Y+R + A K+F + ++ V WT+++ G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 247 YTHSGRMREASEFFDAMPVKPVVACNEM 274
Y G+ +A E F+ M V NE+
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEV 469
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 63/365 (17%)
Query: 22 TGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----- 74
+ I Y + G++ A ++FDE P I +W++MV+ + + P+QAV F
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDI----VTWSSMVSGFEKNGSPYQAVEFFRRMVM 155
Query: 75 --ETTPEK----NIVSW-----------------------------NGMVSGFVKNGMVA 99
+ TP++ +VS N +++ + K+
Sbjct: 156 ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK 215
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLL 155
EA +F + ++V+SW++++ YVQ G EA +F M E NV + +L
Sbjct: 216 EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 275
Query: 156 KDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
+E RK ++ K +V T ++ Y + EEA A+F +P+++VV+W
Sbjct: 276 AAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVA 335
Query: 212 MVSGYARNRRVDVARKLFEVMPERNEVSWTAMLM----GYTHSGRMREASEFFDAMPVKP 267
++SG+ N + + F +M N A+LM G E ++ F + +K
Sbjct: 336 LISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKY 395
Query: 268 VVACNEMIMG-----FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
N I + G + A VF + +D W+++I Y G +AL F
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETF 455
Query: 323 ARMQR 327
M +
Sbjct: 456 NHMVK 460
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 29/285 (10%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
A+V Y + P +A +F P K++VSW ++SGF NGM + F M + N
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 115 SWTSM----VRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD-----SRVEDARK 165
++ V G E E + F K +G L + + +A K
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 166 LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNR 220
+F+ + +KD V T++I GY G+ +A F+ M K N VT+ +++S +
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 221 RVDVARKLFEVM-------PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
+ ++F++M P + L+G G + A E MP P
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV--GDLDTAIEITKRMPFSPTPQILG 540
Query: 274 MIMG---FGFDGDVDR--AKAVFEKMRERDDGTWSAMIKVYERKG 313
++G +G++ AK +FE + G + M VY KG
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFE-LESNHAGYYMLMSNVYGVKG 584
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/627 (28%), Positives = 303/627 (48%), Gaps = 61/627 (9%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP--- 78
T + Y + G + +A KVFD P R +W+ +V++ + + +A+ +F+
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 79 -EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAE 133
E + V+ +V G + G + AR V + + + S++ Y + G++ +E
Sbjct: 198 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSE 257
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF----------DMMPVKDVVAVTNMIG 183
R+F ++ +KN VSWT M+ + E A + F +++ + V++ +IG
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
EG+ A+ E+ +V YA ++ + V+ +RN V+W ++
Sbjct: 318 -LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSL 376
Query: 244 LMGYTHSGRMREASEFFDAMP---VKP--------VVAC--------------------- 271
+ Y H G + +A F M +KP + AC
Sbjct: 377 ISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV 436
Query: 272 ------NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
N +I + G VD A VF +++ R TW++M+ + + G +EA+ LF M
Sbjct: 437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
+N + G+ VH +L+ S +DL+ +ALI MY KCGDL
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDL 555
Query: 386 VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
A+ +F + +V W+SMI Y HG A++ F M SG P+++ F+ VLSAC
Sbjct: 556 NAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
+SG V+EG+ F MK + V P EH+AC +DLL R+G + +A +++MP DA V
Sbjct: 616 GHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV 674
Query: 506 WGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKT 565
WGSL+ CR H K+D+ + L+ + + G Y LLS++YA +G WE+ +R +K+
Sbjct: 675 WGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKS 734
Query: 566 RSVIKLPGYSWIEVEKKAHMFVGGDNN 592
++ K+PGYS IE+++K F G+ N
Sbjct: 735 SNLKKVPGYSAIEIDQKVFRFGAGEEN 761
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/586 (22%), Positives = 258/586 (44%), Gaps = 102/586 (17%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T I YA +G +++R VF+ P+ + + ++ H A+ L+
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPY--PDSFMYGVLIKCNVWCHLLDAAIDLYH-----R 90
Query: 82 IVSWNGMVSGFVKNGMV---AEAR-----------RVFDAMPVRNVVSWTSMVRGYVQEG 127
+VS +S FV ++ A +R R+ + V TS++ Y Q G
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 128 NVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIG 183
N+ +AE++F MP +++V+W+ ++ L++ V A ++F M D V + +++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
G E G L AR++ ++ ++ + ++++ Y++ + + ++FE + ++N VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 240 WTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAV--FEK 293
WTAM+ Y +A F M ++P +V ++ G G + K+V F
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 294 MRERDDG----------------------------------TWSAMIKVYERKGFELEAL 319
RE D W+++I +Y +G ++AL
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
GLF +M + + G+Q+H ++R++ D +V ++LI MY
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMY 449
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
K G + A +FN+ + VV WNSM+ G+SQ+G EA+++F M S + ++++F+
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 440 GVLSACSYSGKVKEG-----REIFESMKCKYQVEPGIEHYA-C----------------- 476
V+ ACS G +++G + I +K + I+ YA C
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569
Query: 477 ------MVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGAC 513
M++ G G++ A+ +M +P+ +V+ ++L AC
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 160/353 (45%), Gaps = 22/353 (6%)
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM 232
+D + VT +I Y G + +R +F+ P + + ++ +D A L+ +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPV--------------KPVVACNEMIMGF 278
VS T + + +R + + + V V ++ +
Sbjct: 92 -----VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 279 GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
G G++ A+ VF+ M RD WS ++ G ++AL +F M +G +
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
R VH ++ R FD D + ++L+TMY KCGDL+ ++ IF + K
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
+ V W +MI+ Y++ E+AL F +M SG+ P+ ++ VLS+C G ++EG+ +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV- 325
Query: 459 ESMKCKYQVEPGIEHYA-CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ +++P E + +V+L G+++D E V ++ + + + W SL+
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDC-ETVLRVVSDRNIVAWNSLI 377
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 315/652 (48%), Gaps = 81/652 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY-----------------FQ 63
S+ ++ YA+ G + +ARKVF+E R W AM+ Y FQ
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 64 AHQPHQAVTLFETTP--------------------EKNIVSWNGMVSGFVKNGMVAEARR 103
+P VTL E + +I N M++ + K V +A+
Sbjct: 142 GIKP-GPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 104 VFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKD 157
+FD M R++VSW +M+ GY GN+ E +L +RM P++ ++ + G + D
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 158 SRVEDARKL--------FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
+E R L FD+ D+ T +I Y + G+ E + + + +P ++VV W
Sbjct: 261 --LEMGRMLHCQIVKTGFDV----DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 210 TTMVSGYARNRRVDVARKLF-EVMPERNEVSWTAML-------------MGYTHSGRMRE 255
T M+SG R R + A +F E++ +++S A+ +G + G +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 256 ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFE 315
D P A N +I + G +D++ +FE+M ERD +W+A+I Y +
Sbjct: 375 HGYTLDT----P--ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDL 428
Query: 316 LEALGLFARMQ-REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASA 374
+AL LF M+ + ++ G+ +H ++RS V +A
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA 488
Query: 375 LITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
L+ MY KCG L A+ F+ KDVV W +I GY HG G+ AL ++ + SG+ P+
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
+ F+ VLS+CS++G V++G +IF SM + VEP EH AC+VDLL RA ++ DA +
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608
Query: 495 EKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
++ P V G +L ACR + K ++ ++ E + +L+P +AG YV L H +A+ RW+
Sbjct: 609 KENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWD 668
Query: 555 DVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLER 606
DV ++++ + KLPG+S IE+ K F + + ++K+L R
Sbjct: 669 DVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLKLLSR 720
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 190/415 (45%), Gaps = 26/415 (6%)
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM 232
D ++++ Y + G L AR +F+EM +R+VV WT M+ Y+R V A L M
Sbjct: 79 SDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM 138
Query: 233 ----PERNEVSWTAMLMGYTHSGRMREASEF-----FDAMPVKPVVACNEMIMGFGFDGD 283
+ V+ ML G +++ +F FD + N M+ +
Sbjct: 139 RFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDC----DIAVMNSMLNLYCKCDH 194
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
V AK +F++M +RD +W+ MI Y G E L L RM+ +G +
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
+ GR +H ++V++ FD D+++ +ALITMY+KCG + + P KDVV W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMK 462
MI+G + G E+AL VF +M SG + V+++C+ G G + ++
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 463 CKYQVE-PGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDL 521
Y ++ P + ++ + + G ++ ++ I E+M E D + W +++ ++ L
Sbjct: 375 HGYTLDTPALNS---LITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQNVDLCK 430
Query: 522 AEVAVEKLAQLEPKNAGPYVLLSHMYASK-------GRWEDVEVVREKIKTRSVI 569
A + E++ + + ++S + A G+ V+R I+ S++
Sbjct: 431 ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G +H +++ + F D Y++S+L+ +Y K G L A+ +F +DVV W +MI YS+
Sbjct: 65 GLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
G+ EA ++ +M G+ P ++ + +LS ++ + Y + I
Sbjct: 125 AGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL----QCLHDFAVIYGFDCDIA 180
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
M++L + V DA ++ ++M + D + W +++
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISG 219
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 239/424 (56%), Gaps = 10/424 (2%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK-RNVVTWTTMVSGYAR 218
V ARK+FD MP ++V MIGGY G A LF+E+ RN VTW M+ GY +
Sbjct: 97 VVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGK 156
Query: 219 NRRVDVARKLFEVMP--ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM 276
++ AR+LFE MP +N +W+ ML Y ++ +M +A +FF+ +P K + M+
Sbjct: 157 RIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMS 216
Query: 277 GFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPX 336
G+ GDV A+A+F ++ RD W+ +I Y + G+ +A+ F MQ EG +
Sbjct: 217 GYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVT 276
Query: 337 XXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP 396
D GR+VH+ + + + +V++ALI MY KCGDL A +F
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 397 LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGRE 456
++ V NSMI+ + HG G+EAL +F M + PD+I+FI VL+AC + G + EG +
Sbjct: 337 VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLK 396
Query: 457 IFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
IF MK + V+P ++H+ C++ LLGR+G++ +A +V++M ++P+ V G+LLGAC+ H
Sbjct: 397 IFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH 455
Query: 517 MKLDLAEVAVEKLAQLEPKNAGPY-----VLLSHMYASKGRWEDVEVVREKIKTRSVIKL 571
M ++AE V K+ + Y +S++YA RW+ E +R +++ R + K
Sbjct: 456 MDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS 514
Query: 572 PGYS 575
PG S
Sbjct: 515 PGLS 518
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 168/327 (51%), Gaps = 17/327 (5%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-ETTPEK 80
+ IS Y + G + +ARKVFDE P R ++WNAM+ Y A LF E + +
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMP--ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 142
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMP--VRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
N V+W M+ G+ K + +AR +F+ MP ++NV +W+ M+ YV +E+A + F
Sbjct: 143 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 139 MPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF 198
+PEKN W++M+ G + V +AR +F + +D+V +I GY + G ++A F
Sbjct: 203 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 262
Query: 199 DEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
M + + VT ++++S A++ R+DV R++ ++ R N+ A++ Y
Sbjct: 263 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 251 GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDGTWSAMI 306
G + A+ F+++ V+ V CN MI G A +F M + D+ T+ A++
Sbjct: 323 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 382
Query: 307 KVYERKGFELEALGLFARMQREGAALN 333
GF +E L +F+ M+ + N
Sbjct: 383 TACVHGGFLMEGLKIFSEMKTQDVKPN 409
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 20/295 (6%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
I Y + +IE AR++F+ P + +W+ M+ Y + A FE PEKN
Sbjct: 151 IKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFV 210
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP---- 140
W+ M+SG+ + G V EAR +F + R++V W +++ GY Q G ++A F+ M
Sbjct: 211 WSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGY 270
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA---VTN-MIGGYCEEGRLEEARA 196
E + V+ + +L + R++ R++ ++ + + V+N +I Y + G LE A +
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATS 330
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGR 252
+F+ + R+V +M+S A + + A ++F M + +E+++ A+L H G
Sbjct: 331 VFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 253 MREASEFFDAMP---VKPVV---ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT 301
+ E + F M VKP V C +I G G + A + ++M + + T
Sbjct: 391 LMEGLKIFSEMKTQDVKPNVKHFGC--LIHLLGRSGKLKEAYRLVKEMHVKPNDT 443
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
S +IK + +G ++AL L+ ++R G G+ +H+ ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
D+ V S+LI+MY KCG +V A+ +F+ P ++V WN+MI GY +G A +
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLG 482
F ++ V + +++I ++ ++++ RE+FE M + + ++ ++ M+ +
Sbjct: 135 FEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVYV 188
Query: 483 RAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++ DA + E +P E +A VW ++
Sbjct: 189 NNRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 290/557 (52%), Gaps = 35/557 (6%)
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGN--VEEAER 134
TP N+ +N M+S + E ++ +M +R+ VS Y+ + + + E ++
Sbjct: 95 TPNPNVFVYNTMISAVSSSK--NECFGLYSSM-IRHRVSPDRQTFLYLMKASSFLSEVKQ 151
Query: 135 LFWRMPEKNVVSWTVMLGGLLKDSRVED---------ARKLFDMMPVKDVVAVTNMIGGY 185
+ + +VS + LG L +S V+ A K+F MP DV + MI GY
Sbjct: 152 IHCHI----IVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGY 207
Query: 186 CEEGRLEEARALFDEM------PKRNVVTWTTMVSGYARNRRVD------VARKLFEVMP 233
++G EA L+ +M P V + G+ + R+ + R+ +
Sbjct: 208 AKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR--GPVY 265
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEK 293
N + A+L Y A FDAM K + + N M++GF GD++ A+AVF++
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 294 MRERDDGTWSAMIKVYERKGFELEAL-GLFARMQ-REGAALNFPXXXXXXXXXXXXXXXD 351
M +RD +W++++ Y +KG + + LF M E +
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
HGR VH ++R + D +++SALI MY KCG + RA +F KDV +W SMITG +
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
HG G++AL +F M GV P++++ + VL+ACS+SG V+EG +F MK K+ +P
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 472 EHYACMVDLLGRAGQVNDAVEIVE-KMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
EHY +VDLL RAG+V +A +IV+ KMPM P +WGS+L ACR ++ AE+A+ +L
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELL 565
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGD 590
+LEP+ G YVLLS++YA+ GRW + RE ++ R V K GYS + + H FV +
Sbjct: 566 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAE 625
Query: 591 NNCHPEQPIIMKMLERL 607
HP I ++L+ L
Sbjct: 626 KQNHPRWTEIKRILQHL 642
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
NA++ YF+ + A F+ +K++ SWN MV GFV+ G + A+ VFD MP R++V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 115 SWTSMVRGYVQEGNVEEAER-LFWRMP-----EKNVVSWTVMLGGLLKDSRVEDAR---K 165
SW S++ GY ++G + R LF+ M + + V+ ++ G + + R
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 166 LFDMMPVK-DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
L + +K D + +I YC+ G +E A +F +++V WT+M++G A +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 225 ARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGF 280
A +LF M E N V+ A+L +HSG + E F+ M K FGF
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK-----------FGF 501
Query: 281 DGDVD 285
D + +
Sbjct: 502 DPETE 506
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 173/387 (44%), Gaps = 39/387 (10%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----- 108
WN++V Y + A +F P ++ S+N M+ G+ K G EA +++ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 109 -PVRNVVSWTSMVRGYVQEGNVEEA-----ERLFWRMP--EKNVVSWTVMLGGLLKDSRV 160
P V + G++ + + + ER R P N++ +L K
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER---RGPVYSSNLILSNALLDMYFKCKES 285
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR-- 218
A++ FD M KD+ + M+ G+ G +E A+A+FD+MPKR++V+W +++ GY++
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 219 -NRRVDVARKLF-------EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
++R R+LF +V P+R V+ +++ G ++G + + + ++ +
Sbjct: 346 CDQR--TVRELFYEMTIVEKVKPDR--VTMVSLISGAANNGELSHG-RWVHGLVIRLQLK 400
Query: 271 CNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
+ + D G ++RA VF+ E+D W++MI G +AL LF RM
Sbjct: 401 GDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV-RSEFDQDLYVASALITMYVKCGD 384
Q EG N + G V + + FD + +L+ + + G
Sbjct: 461 QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGR 520
Query: 385 LVRAKWIFN-RYPLK-DVVMWNSMITG 409
+ AK I + P++ MW S+++
Sbjct: 521 VEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 214/375 (57%), Gaps = 6/375 (1%)
Query: 238 VSWTAMLMGYTHS-GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRE 296
V TA+L Y S + A + FD M + VV+ M+ G+ GD+ A A+FE M E
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 297 RDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQ 355
RD +W+A++ + G LEA+ LF RM E + N +
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
+HA R + D++V+++L+ +Y KCG+L A +F K + WNSMI ++ HG
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 416 GEEALNVFRDMC---LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
EEA+ VF +M ++ + PD I+FIG+L+AC++ G V +GR F+ M ++ +EP IE
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
HY C++DLLGRAG+ ++A+E++ M M+ D +WGSLL AC+ H LDLAEVAV+ L L
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 533 EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNN 592
P N G +++++Y G WE+ R+ IK ++ K PG+S IE++ + H F D +
Sbjct: 462 NPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKS 521
Query: 593 CHPEQPIIMKMLERL 607
HPE I +L+ L
Sbjct: 522 -HPETEEIYMILDSL 535
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 26/268 (9%)
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
A LF+ E+N+VSW M+SG+ ++G ++ A +F+ MP R+V SW +++ Q G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 130 EEAERLFWRMPEK-----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV---VAVTN- 180
EA LF RM + N V+ +L + ++ A+ + +D+ V V+N
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN---- 236
++ Y + G LEEA ++F K+++ W +M++ +A + R + A +FE M + N
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 237 ---EVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVV---ACNEMIMGFGFDGDVDR 286
+++ +L TH G + + +FD M ++P + C +I G G D
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC--LIDLLGRAGRFDE 418
Query: 287 AKAVFEKMRER-DDGTWSAMIKVYERKG 313
A V M+ + D+ W +++ + G
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNACKIHG 446
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 41/194 (21%)
Query: 175 VVAVTNMIGGYCEE-GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
VV T ++ Y + AR LFDEM +RNVV+WT M+SGYAR+ + A LFE MP
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV------------AC---------- 271
ER+ SW A+L T +G EA F M +P + AC
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 272 ------------------NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKG 313
N ++ +G G+++ A +VF+ ++ W++MI + G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 314 FELEALGLFARMQR 327
EA+ +F M +
Sbjct: 341 RSEEAIAVFEEMMK 354
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 177/613 (28%), Positives = 294/613 (47%), Gaps = 64/613 (10%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
YA ++E AR VFDE PH +W+ M+ AY +A+ L+ +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSW----------TSMVRGYVQEGNVEEAERLFW 137
+K A R + D + + V+ T++V Y + G +E A ++F
Sbjct: 105 TYPFVLK--ACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFD 162
Query: 138 RMPEKNVVSWTVMLGGLLKDSRVEDARKLF-DMMPVK----DVVAVTNMIGGYCEEGRLE 192
MP++++V+W M+ G + D LF DM + ++ + M G L
Sbjct: 163 EMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR 222
Query: 193 EARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
E +A+ + ++V T ++ YA+++ + AR++F++ ++NEV+W+AM+ GY
Sbjct: 223 EGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 249 HSGRMREASEFF------DAMPVKPVVACNEMIMGFGFDGDVDRAKAV------------ 290
+ ++EA E F D + + VA ++MG GD+ + V
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 291 -----------------------FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
F ++ +D +++++I E+ LF M+
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
G + HG H V + + + +AL+ MY KCG L
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 388 AKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
AK +F+ +D+V WN+M+ G+ HGLG+EAL++F M +GV PD+++ + +LSACS+
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 448 SGKVKEGREIFESM-KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW 506
SG V EG+++F SM + + V P I+HY CM DLL RAG +++A + V KMP EPD V
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 507 GSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
G+LL AC T+ +L +K+ L + VLLS+ Y++ RWED +R K R
Sbjct: 583 GTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKR 641
Query: 567 SVIKLPGYSWIEV 579
++K PGYSW++V
Sbjct: 642 GLLKTPGYSWVDV 654
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 210/485 (43%), Gaps = 41/485 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR- 111
S N ++ H +++TL +T N+ + V AR VFD +P
Sbjct: 12 SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRL------YASCNEVELARHVFDEIPHPR 65
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKL 166
N ++W M+R Y E+A L+++M V ++ +L ++D + +
Sbjct: 66 INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLI 125
Query: 167 FDMMPVKDVVA----VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
+ D T ++ Y + G LE A +FDEMPKR++V W M+SG++ + +
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL 185
Query: 223 DVARKLFEVM-----PERNEVSWTAMLMGYTHSGRMREASE---------FFDAMPVKPV 268
LF M N + M +G +RE F + + VK
Sbjct: 186 TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK-- 243
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-R 327
++ + + A+ VF+ ++++ TWSAMI Y EA +F +M
Sbjct: 244 ---TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 328 EGAALNFPXXX-XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
+ A+ P GR VH V++ F DL V + +I+ Y K G L
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
A F+ LKDV+ +NS+ITG + EE+ +F +M SG+ PD + +GVL+ACS
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 447 YSGKVKEGREIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
+ + G + Y V I + ++D+ + G+++ A + + M + D +
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMH-KRDIVS 477
Query: 506 WGSLL 510
W ++L
Sbjct: 478 WNTML 482
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 190/463 (41%), Gaps = 70/463 (15%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
T + YA+ G++E A KVFDE P R +WNAM++ + + LF
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMP--KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 75 ETTP---------------------------------EKNIVSWNGMVSGFVKNGMVAEA 101
+P ++V G++ + K+ + A
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT--VMLGGLLKD-S 158
RRVFD +N V+W++M+ GYV+ ++EA +F++M + V+ V +G +L +
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCA 319
Query: 159 RVEDAR--KLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
R D + VK D+ +I Y + G L +A F E+ ++V+++ +
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 212 MVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
+++G N R + + +LF M + + +L +H + S V
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 268 VVA----CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
CN ++ + G +D AK VF+ M +RD +W+ M+ + G EAL LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ----DLYVASALITMY 379
MQ G + D G+Q+ + R +F+ D Y + + +
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY--NCMTDLL 557
Query: 380 VKCGDLVRAKWIFNRYPLK-DVVMWNSMITG---YSQHGLGEE 418
+ G L A N+ P + D+ + ++++ Y LG E
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 247/457 (54%), Gaps = 5/457 (1%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
V+ A +F + +V T MI G+ GR + +L+ M +V+ +++ +
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 220 RRVDVARKLFEVMPERNEVSWTA----MLMGYTHSGRMREASEFFDAMPVKPVVACNEMI 275
+ V R++ + + S + M+ Y SG + A + FD MP + VA MI
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 276 MGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP 335
+ G + A +F+ ++ +D W+AMI R +AL LF MQ E + N
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY 395
+ GR VH+ + + +V +ALI MY +CGD+ A+ +F
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 396 PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
KDV+ +N+MI+G + HG EA+N FRDM G P+ ++ + +L+ACS+ G + G
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 456 EIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRT 515
E+F SMK + VEP IEHY C+VDLLGR G++ +A +E +P+EPD I+ G+LL AC+
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI 436
Query: 516 HMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYS 575
H ++L E ++L + E ++G YVLLS++YAS G+W++ +RE ++ + K PG S
Sbjct: 437 HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Query: 576 WIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLR 612
IEV+ + H F+ GD HP + I + L+ L+ +LR
Sbjct: 497 TIEVDNQIHEFLVGD-IAHPHKEAIYQRLQELNRILR 532
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 181/419 (43%), Gaps = 22/419 (5%)
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNV 129
A +F N+ + M+ GFV +G A+ ++ M +V+ ++ ++ ++
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 130 E-----EAERLFWRMPEKNVVSWTVM-LGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIG 183
+ A+ L V +M + G K + +A+K+FD MP +D VA T MI
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYG--KSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVS 239
Y E G ++EA LF ++ ++ V WT M+ G RN+ ++ A +LF M NE +
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 240 WTAML-----MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
+L +G GR + M + V N +I + GD++ A+ VF M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG-NALINMYSRCGDINEARRVFRVM 316
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
R++D +++ MI G +EA+ F M G N D G
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 355 QVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQ 412
+V + R + + ++ + + G L A P++ D +M ++++
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI 436
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK-CKYQVEPG 470
HG E + + + PD +++ + + + SGK KE EI ESM+ + EPG
Sbjct: 437 HGNMELGEKIAKRL-FESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 27/309 (8%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y + G++ NA+K+FDE P R + M+ Y + +A+ LF+ K+ V W
Sbjct: 168 YGKSGELVNAKKMFDEMP--DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTA 225
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVS--WTSM-VRGYVQEGNVEEAERLFWRMPEKNV 144
M+ G V+N + +A +F M + NV + +T++ V + E R E
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR 285
Query: 145 VSWTVMLGGLLKD--SR---VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
+ + +G L + SR + +AR++F +M KDV++ MI G G EA F
Sbjct: 286 MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 200 EMPKR----NVVTWTTMVSGYARNRRVDVA-------RKLFEVMPERNEVSWTAMLMGYT 248
+M R N VT +++ + +D+ +++F V P+ L+G
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 249 HSGRMREASEFFDAMPVKPV-VACNEMIMGFGFDGDVDRAKAVFEKMRER---DDGTWSA 304
GR+ EA F + +P++P + ++ G+++ + + +++ E D GT+
Sbjct: 406 --GRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 305 MIKVYERKG 313
+ +Y G
Sbjct: 464 LSNLYASSG 472
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
H +HA+++R+ DQD +V LI + + A +F+ +V ++ +MI G+
Sbjct: 44 HVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFV 103
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMKCKYQVEPG 470
G + ++++ M + V PD+ VL AC +K REI + +K +
Sbjct: 104 SSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRS 159
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMP 498
+ M+++ G++G++ +A ++ ++MP
Sbjct: 160 VGLK--MMEIYGKSGELVNAKKMFDEMP 185
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/615 (28%), Positives = 287/615 (46%), Gaps = 61/615 (9%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T +S Y G ++AR VFD+ P W M+ Y + + V L++ +
Sbjct: 79 ATKLVSLYGFFGYTKDARLVFDQIPEPDFYL--WKVMLRCYCLNKESVEVVKLYDLLMKH 136
Query: 81 NIVSWNGMVSGFVK---------NGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEE 131
+ + S +K NG + V +P + V T ++ Y + G ++
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLV--KVPSFDNVVLTGLLDMYAKCGEIKS 194
Query: 132 AERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA----VTNMIGGYCE 187
A ++F + +NVV WT M+ G +K+ E+ LF+ M +V+ +I +
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 188 EGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
L + + + K + T+++ Y + + AR++F + V WTAM
Sbjct: 255 LSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 244 LMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGF------------------- 280
++GYTH+G + EA F M +KP V ++ G G
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 281 -DGDVDRA--------------KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
D +V A K VFE E+D W+++I + + G EAL LF RM
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF--DQDLYVASALITMYVKCG 383
E N G +HA V+ F ++V +AL+ Y KCG
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
D A+ IF+ K+ + W++MI GY + G +L +F +M P++ +F +LS
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
AC ++G V EG++ F SM Y P +HY CMVD+L RAG++ A++I+EKMP++PD
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKI 563
+G+ L C H + DL E+ ++K+ L P +A YVL+S++YAS GRW + VR +
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Query: 564 KTRSVIKLPGYSWIE 578
K R + K+ G+S +E
Sbjct: 675 KQRGLSKIAGHSTME 689
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 16/347 (4%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D+ T ++ Y G ++AR +FD++P+ + W M+ Y N+ KL++++
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 234 ER----NEVSWTAMLMGYTHSGRMREASEF---FDAMPVKPVVACNEMIMGFGFDGDVDR 286
+ +++ ++ L T + + +P V ++ + G++
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKS 194
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
A VF + R+ W++MI Y + E L LF RM+ N
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
G+ H LV+S + + ++L+ MYVKCGD+ A+ +FN + D+VMW +M
Sbjct: 255 LSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
I GY+ +G EAL++F+ M + P+ ++ VLS C ++ GR +
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH-----GLS 369
Query: 467 VEPGI---EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++ GI +V + + Q DA + E M E D + W S++
Sbjct: 370 IKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSII 415
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 152/351 (43%), Gaps = 66/351 (18%)
Query: 11 CMVQVRFQ---CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP 67
C+V+ + C T + Y + G I NAR+VF+E H H W AM+ Y
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE--HSHVDLVMWTAMIVGYTHNGSV 324
Query: 68 HQAVTLFETTP----EKNIVSWNGMVSGF-------------------------VKNGMV 98
++A++LF+ + N V+ ++SG V N +V
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALV 384
Query: 99 A---------EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV---- 145
+A+ VF+ +++V+W S++ G+ Q G++ EA LF RM ++V
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV 444
Query: 146 ------SWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFD 199
S LG L S + + V T ++ Y + G + AR +FD
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD 504
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMRE 255
+ ++N +TW+ M+ GY + + +LFE M ++ NE ++T++L H+G + E
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNE 564
Query: 256 ASEFFDAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
++F +M P C M+ G++++A + EKM + D
Sbjct: 565 GKKYFSSMYKDYNFTPSTKHYTC--MVDMLARAGELEQALDIIEKMPIQPD 613
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
+ +G++L++ D RQ H L + D+ +A+ L+++Y G
Sbjct: 33 ENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYT 92
Query: 386 VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
A+ +F++ P D +W M+ Y + E + ++ + G DDI F L AC
Sbjct: 93 KDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYAC--MVDLLGRAGQVNDAVEIVEKMPMEPDA 503
+ + G++I C+ P ++ ++D+ + G++ A ++ + + +
Sbjct: 153 TELQDLDNGKKI----HCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NV 207
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKN 536
+ W S++ ++K DL E + ++ N
Sbjct: 208 VCWTSMIAG---YVKNDLCEEGLVLFNRMRENN 237
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 246/460 (53%), Gaps = 45/460 (9%)
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV---------------- 206
A KLFD +P DV +++ G + + E+ +L+ EM KR V
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 207 VTWTT--------------MVSGYARNRRV---------DVARKLFEVMPERNEVSWTAM 243
+ W + +++ Y +N + +A +LF+ + ++V+W++M
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWS 303
GY G++ EA FD MP K VA N MI G ++D A+ +F++ E+D TW+
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWN 244
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
AMI Y G+ EALG+F M+ G + + G+++H ++ +
Sbjct: 245 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 304
Query: 364 -EFDQDLYVAS----ALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
+YV + ALI MY KCG + RA +F +D+ WN++I G + H E
Sbjct: 305 ASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEG 363
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
++ +F +M V P++++FIGV+ ACS+SG+V EGR+ F M+ Y +EP I+HY CMV
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 479 DLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAG 538
D+LGRAGQ+ +A VE M +EP+AIVW +LLGAC+ + ++L + A EKL + +G
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESG 483
Query: 539 PYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
YVLLS++YAS G+W+ V+ VR+ V K G S IE
Sbjct: 484 DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 204/512 (39%), Gaps = 110/512 (21%)
Query: 32 GQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------TTPEK----- 80
G ++ A K+FDE P S N ++ Q+ +P + V+L+ +P++
Sbjct: 60 GALKYAHKLFDEIPK--PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 81 ------------NIVSWNGMV--SGFVKN--------------GMVAEARRVFDAMPVRN 112
N +++G V GFV N G + A +FD +
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 113 VVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV 172
V+W+SM GY + G ++EA RLF MP K+ V+W VM+ G LK ++ AR+LFD
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTE 237
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSGYARNRRVDVARKL 228
KDVV MI GY G +EA +F EM +VVT +++S A ++ ++L
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 229 FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAK 288
+ E VS S + P+ N +I + G +DRA
Sbjct: 298 HIYILETASVS-----------------SSIYVGTPI-----WNALIDMYAKCGSIDRAI 335
Query: 289 AVFEKMRERDDGTWSAMI---KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
VF +++RD TW+ +I ++ +G ++ +F MQR N
Sbjct: 336 EVFRGVKDRDLSTWNTLIVGLALHHAEG----SIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNS 405
D GR+ + + +D+Y I Y
Sbjct: 392 HSGRVDEGRKYFSLM------RDMYNIEPNIKHY------------------------GC 421
Query: 406 MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKY 465
M+ + G EEA M + P+ I + +L AC G V+ G+ E +
Sbjct: 422 MVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 478
Query: 466 QVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
+ E G Y + ++ GQ D V+ V KM
Sbjct: 479 KDESG--DYVLLSNIYASTGQW-DGVQKVRKM 507
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 130/253 (51%), Gaps = 20/253 (7%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
+A G + A ++FD++ H+ +W++M + Y + + +A+ LF+ P K+ V+WN
Sbjct: 157 HANCGDLGIASELFDDSAKAHKV--AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNV 214
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----N 143
M++G +K + AR +FD ++VV+W +M+ GYV G +EA +F M + +
Sbjct: 215 MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPD 274
Query: 144 VVSWTVMLGGLLKDSRVEDARKL----FDMMPVKDVVAV-----TNMIGGYCEEGRLEEA 194
VV+ +L +E ++L + V + V +I Y + G ++ A
Sbjct: 275 VVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA 334
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
+F + R++ TW T++ G A + + + ++FE M NEV++ +++ +HS
Sbjct: 335 IEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 251 GRMREASEFFDAM 263
GR+ E ++F M
Sbjct: 394 GRVDEGRKYFSLM 406
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 35/317 (11%)
Query: 26 SRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSW 85
S YA+ G+I+ A ++FDE P ++ +WN M+ + + A LF+ EK++V+W
Sbjct: 186 SGYAKRGKIDEAMRLFDEMP--YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 86 NGMVSGFVKNGMVAEARRVF----DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE 141
N M+SG+V G EA +F DA +VV+ S++ G++E +RL + E
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 142 KNVVS---------WTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC---EEG 189
VS W ++ K ++ A ++F + +D+ +I G EG
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG 363
Query: 190 RLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMP-----ERNEVSW 240
+E +F+EM + V VT+ ++ + + RVD RK F +M E N +
Sbjct: 364 SIE----MFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHY 419
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG-FGFDGDVDRAKAVFEK---MRE 296
M+ +G++ EA F ++M ++P ++G G+V+ K EK MR+
Sbjct: 420 GCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
Query: 297 RDDGTWSAMIKVYERKG 313
+ G + + +Y G
Sbjct: 480 DESGDYVLLSNIYASTG 496
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 272/525 (51%), Gaps = 23/525 (4%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE-RLFWRM----- 139
N ++ V+ G + +F N S+ M+RG N EA L+ RM
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 140 -PEKNVVSWTVMLGGLLKDSRVEDA--RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARA 196
P+K ++ + L++ V + LF + +DV ++I Y + G++ AR
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 197 LFDEMPKRNVVTWTTMVSGYAR----NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
LFDE+ +R+ V+W +M+SGY+ +D+ RK+ E E +E + +ML +H G
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 253 MREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
+R + M + + + ++I +G GD+D A+ VF +M ++D W+AMI
Sbjct: 249 LR-TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMIT 307
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ 367
VY + G EA LF M++ G + + + G+Q+
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH 367
Query: 368 DLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMC 427
++YVA+ L+ MY KCG + A +F P+K+ WN+MIT Y+ G +EAL +F M
Sbjct: 368 NIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM- 426
Query: 428 LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQV 487
VPP DI+FIGVLSAC ++G V +G F M + + P IEHY ++DLL RAG +
Sbjct: 427 --SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 488 NDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL-EPKNAGPYVLLSHM 546
++A E +E+ P +PD I+ ++LGAC + + E A+ L ++ E KNAG YV+ S++
Sbjct: 485 DEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNV 544
Query: 547 YASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDN 591
A W++ +R ++ R V+K PG SWIE+E + F+ G +
Sbjct: 545 LADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 26/284 (9%)
Query: 72 TLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEE 131
+LF+ E+++ + ++ + K G V AR++FD + R+ VSW SM+ GY + G ++
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 132 AERLFWRMPEKNVV----SWTVMLGGLLKDSRVEDAR--KLFDMMPVKDVVAVTNMIGG- 184
A LF +M E+ + MLG S + D R +L + M + + ++ +G
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGAC---SHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 185 ----YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW 240
Y + G L+ AR +F++M K++ V WT M++ Y++N + A KLF M E+ VS
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSP 332
Query: 241 TAMLM----------GYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
A + G G+ E ++ VA + M +G G V+ A V
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDM-YGKCGRVEEALRV 391
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
FE M +++ TW+AMI Y +G EAL LF RM + + F
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITF 435
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP------ 78
I YA+ GQ+ ARK+FDE R T SWN+M++ Y +A A+ LF
Sbjct: 174 IMMYAKCGQVGYARKLFDEITE--RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 79 -EKNIVSWNG--------------------------------MVSGFVKNGMVAEARRVF 105
E+ +VS G ++S + K G + ARRVF
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE----------KNVVSWTVMLGGLL 155
+ M ++ V+WT+M+ Y Q G EA +LF+ M + V+S +G L
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 156 KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
++E + ++ T ++ Y + GR+EEA +F+ MP +N TW M++
Sbjct: 352 LGKQIETHASELSLQ--HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 216 YARNRRVDVARKLFEVMP-ERNEVSWTAMLMGYTHSGRMREASEFFDAM 263
YA A LF+ M +++++ +L H+G + + +F M
Sbjct: 410 YAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 49/261 (18%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
++++ Y + Q A LF+ E++ VSWN M+SG+ + G +A +F M
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 115 ----SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL-----KDSRVEDARK 165
+ SM+ G++ RL M + + LG L K ++ AR+
Sbjct: 231 PDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 166 LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK---------------------- 203
+F+ M KD VA T MI Y + G+ EA LF EM K
Sbjct: 290 VFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 349
Query: 204 -----------------RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMG 246
N+ T +V Y + RV+ A ++FE MP +NE +W AM+
Sbjct: 350 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 247 YTHSGRMREASEFFDAMPVKP 267
Y H G +EA FD M V P
Sbjct: 410 YAHQGHAKEALLLFDRMSVPP 430
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 58/265 (21%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF---------- 74
IS Y + G +++AR+VF++ I + +W AM+ Y Q + +A LF
Sbjct: 275 ISMYGKCGDLDSARRVFNQM--IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 75 -----------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRVF 105
E + + NI G+V + K G V EA RVF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM--PEKN-----VVSWTVMLGGLLKDS 158
+AMPV+N +W +M+ Y +G+ +EA LF RM P + V+S V G + +
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGC 452
Query: 159 R-VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
R + +F ++P + TN+I G L+EA + P + + G A
Sbjct: 453 RYFHEMSSMFGLVP--KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG-A 509
Query: 218 RNRRVDVA------RKLFEVMPERN 236
++R DVA R L E+ +N
Sbjct: 510 CHKRKDVAIREKAMRMLMEMKEAKN 534
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 20/241 (8%)
Query: 44 TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARR 103
T I +T + +++ Y + A +F +K+ V+W M++ + +NG +EA +
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 104 VFDAMPVRNVV----SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL---- 155
+F M V + ++++ G +E +++ E ++ + GL+
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 156 KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM--PKRNVVTWTTMV 213
K RVE+A ++F+ MPVK+ MI Y +G +EA LFD M P + +T+ ++
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVL 439
Query: 214 SG-------YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
S + R +F ++P+ +T ++ + +G + EA EF + P K
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEH--YTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 267 P 267
P
Sbjct: 498 P 498
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPH--QAVTLFE--T 76
+TG + Y + G++E A +VF+ P + ++WNAM+ AY AHQ H +A+ LF+ +
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMP--VKNEATWNAMITAY--AHQGHAKEALLLFDRMS 427
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMP-----VRNVVSWTSMVRGYVQEGNVEE 131
P +I ++ G++S V G+V + R F M V + +T+++ + G ++E
Sbjct: 428 VPPSDI-TFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDE 486
Query: 132 AERLFWRMPEK-NVVSWTVMLGGLLKDSRVEDARKLFDMM 170
A R P K + + +LG K V K M+
Sbjct: 487 AWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRML 526
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/504 (31%), Positives = 262/504 (51%), Gaps = 39/504 (7%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW 147
+V+ +V+ G V +AR+VFD MP R++ M+ + G +E+ F M + +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPV--------KDVVAVTNMIGGYCEEGRLEEARALFD 199
++ LLK SR R+ M+ D V+++I Y + G + AR +F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMRE 255
++ ++++V + M+SGYA N + D A L + M + + ++W A++ G++H +
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 256 ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFE 315
SE + M + G+ DV +W+++I
Sbjct: 237 VSEILELMCLD------------GYKPDVV---------------SWTSIISGLVHNFQN 269
Query: 316 LEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
+A F +M G N HG+++H V + + +V SAL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
+ MY KCG + A +F + P K V +NSMI Y+ HGL ++A+ +F M +G D
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 436 ISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVE 495
++F +L+ACS++G G+ +F M+ KY++ P +EHYACMVDLLGRAG++ +A E+++
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 496 KMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWED 555
M MEPD VWG+LL ACR H ++LA +A + LA+LEP+N+G +LL+ +YA+ G WE
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Query: 556 VEVVREKIKTRSVIKLPGYSWIEV 579
V +++ IK + + G SW+E
Sbjct: 510 VVRMKKMIKKKRFRRFLGSSWVET 533
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 143/365 (39%), Gaps = 65/365 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAA-----YFQ---------------- 63
++ Y G++ +ARKVFDE P R S M+ A Y+Q
Sbjct: 58 VTFYVECGKVLDARKVFDEMP--KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKL 115
Query: 64 --------------------AHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARR 103
H V F + IVS ++ + K G V AR+
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS--SLIDMYSKFGEVGNARK 173
Query: 104 VFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSR 159
VF + +++V + +M+ GY +EA L M + +V++W ++ G
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 160 VEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTT 211
E ++ ++M + DVV+ T++I G + E+A F +M N T T
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 212 MVSGYARNRRVDVARKL--FEVMP--ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
++ + +++ + V+ E + +A+L Y G + EA F P K
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKM----RERDDGTWSAMIKVYERKGFELEALGLFA 323
V N MI + G D+A +F++M + D T++A++ G LF
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 324 RMQRE 328
MQ +
Sbjct: 414 LMQNK 418
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
GR +HA LV S + +A+ L+T YV+CG ++ A+ +F+ P +D+ MI ++
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+G +E+L+ FR+M G+ D +L A S + +E ++ + K+ E
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE--KLA 530
+ ++D+ + G+V +A ++ + E D +V+ +++ + + D A V+ KL
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 531 QLEP 534
++P
Sbjct: 213 GIKP 216
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 248/449 (55%), Gaps = 18/449 (4%)
Query: 159 RVED---ARKLFDMMPVKDVVAVTNMIGGY------CEEGRL--EEARALFDEMPKRNVV 207
++ED A +LF+ + +V ++I Y C+ R+ + R F E+P R
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSF-ELPDR--F 110
Query: 208 TWTTMVSGYARNRRVDVARK----LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM 263
T+ M A + ++ L + P + V+ A++ Y + +A + FD M
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
+ V++ N ++ G+ G + +AK +F M ++ +W+AMI Y G +EA+ F
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
MQ G + + G+ +H R F + V +ALI MY KCG
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
+ +A +F + KDV+ W++MI+GY+ HG A+ F +M + V P+ I+F+G+LS
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
ACS+ G +EG F+ M+ YQ+EP IEHY C++D+L RAG++ AVEI + MPM+PD+
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKI 563
+WGSLL +CRT LD+A VA++ L +LEP++ G YVLL+++YA G+WEDV +R+ I
Sbjct: 411 KIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMI 470
Query: 564 KTRSVIKLPGYSWIEVEKKAHMFVGGDNN 592
+ ++ K PG S IEV FV GDN+
Sbjct: 471 RNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 45 PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
P H T NA++ Y + A +F+ E++++SWN ++SG+ + G + +A+ +
Sbjct: 140 PRFHVVTE--NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRV 160
F M + +VSWT+M+ GY G EA F M E + +S +L + +
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 161 EDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
E + + +K +I Y + G + +A LF +M ++V++W+TM+SGY
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 217 ARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAM 263
A + A + F M + N +++ +L +H G +E +FD M
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM 368
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 150/373 (40%), Gaps = 56/373 (15%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF-------WRMPEKNVVSW----TV 149
A R+F+ + NV + S++R Y + R++ + +P++ +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 150 MLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
LG +V L P VV +I Y + L +A +FDEM +R+V++W
Sbjct: 121 SLGSCYLGKQVHG--HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP----- 264
+++SGYAR ++ A+ LF +M ++ VSWTAM+ GYT G EA +FF M
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 265 ----------------------------------VKPVVACNEMIMGFGFDGDVDRAKAV 290
+K CN +I + G + +A +
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
F +M +D +WS MI Y G A+ F MQR N
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 351 DHGRQVHARLVRSEFDQDLYVA--SALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMI 407
G + + ++R ++ + + LI + + G L RA I P+K D +W S++
Sbjct: 359 QEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 408 TGYSQHGLGEEAL 420
+ G + AL
Sbjct: 418 SSCRTPGNLDVAL 430
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
++++A ++ Q ++ + ++ K D+ A +FN+ +V ++NS+I Y+ +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 414 GLGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
L + + +++ + PD +F + +C+ G G+++ + CK+ +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL-CKFGPRFHVV 145
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
++D+ + + DA ++ ++M E D I W SLL
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSG 184
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 183/690 (26%), Positives = 310/690 (44%), Gaps = 132/690 (19%)
Query: 47 IHRTTSSWNAMVAAY--FQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
+ + T NA+V+ Y F P A T F+ +K++VSWN +++GF +N M+A+A R
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFP-DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRS 211
Query: 105 F----------------DAMPV-----RNVV--------------SW--------TSMVR 121
F + +PV +N+ SW S+V
Sbjct: 212 FCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVS 271
Query: 122 GYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF-------------- 167
Y++ G +EEA LF RM K++VSW V++ G + A +LF
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 168 ---DMMPV------------------------KDVVAVTNMIGGYCEEGRLEEARALFDE 200
++PV +D +I Y G A F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 201 MPKRNVVTWTTMVSGYARNRR--------------------------------VDVARKL 228
M +++++W ++ +A + + V K+
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 229 FEVM----------PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK-PVVACNEMIMG 277
EV E A+L Y G + A + F + + +V+ N ++ G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 278 FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXX 337
+ G D A+ +F +M D TWS M+++Y EA+G+F +Q G N
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 338 XXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL 397
RQ H ++R D+ + L+ +Y KCG L A +F
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 398 KDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI 457
+D+VM+ +M+ GY+ HG G+EAL ++ M S + PD + +L+AC ++G +++G +I
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 458 FESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHM 517
++S++ + ++P +E YAC VDL+ R G+++DA V +MP+EP+A +WG+LL AC T+
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 518 KLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
++DL L Q E + G +VL+S+MYA+ +WE V +R +K + + K G SW+
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Query: 578 EVEKKAHMFVGGDNNCHPEQPIIMKMLERL 607
EV+ + ++FV GD + HP + I ++ L
Sbjct: 811 EVDGQRNVFVSGDCS-HPRRDSIFDLVNAL 839
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 26/354 (7%)
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM---- 232
+V NM Y + R+++ + +F +M + V W +++G + + + R F+ M
Sbjct: 61 SVLNM---YAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMR-FFKAMHFAD 116
Query: 233 -PERNEVSWTAML-----MGYTHSGRMREASEFFDAMPVKPVV--ACNEMIMGFGFDGDV 284
P+ + V++ +L +G +++G+ + + +V A M FGF
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI--F 174
Query: 285 DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX--- 341
A F+ + ++D +W+A+I + +A F M +E N+
Sbjct: 175 PDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 342 XXXXXXXXXDHGRQVHARLV-RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
GRQ+H+ +V RS ++V ++L++ Y++ G + A +F R KD+
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFE 459
V WN +I GY+ + +A +F ++ G V PD ++ I +L C+ + G+EI
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 460 S-MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
++ Y +E A ++ R G + A M + D I W ++L A
Sbjct: 355 YILRHSYLLEDTSVGNA-LISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
+ YA+ G +E A K+F RT S+N++++ Y + A LF ++ +
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSE-RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMP 140
W+ MV + ++ EA VF + R N V+ +++ Q ++ +
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ------ 589
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDE 200
++ GGL D+ ++ Y + G L+ A ++F
Sbjct: 590 ----CHGYIIRGGL------------------GDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Query: 201 MPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREA 256
+R++V +T MV+GYA + R A ++ M E N V T ML H+G +++
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 257 SEFFDAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMIK 307
+ +D++ P AC ++ G G +D A + +M E + W +++
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARG--GRLDDAYSFVTQMPVEPNANIWGTLLR 744
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 259/501 (51%), Gaps = 37/501 (7%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK--- 142
N ++ + KN + A +F MP NVVSW M+ G+ QE +++ RM +
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 143 -NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
N V+ +LG + VE R++F +P V A M+ GY EEA + F +M
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 202 PKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
+N+ T + ++S AR R ++ +++ V+ R E+S + ++ SG + S
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI-RTEISKNSHIV----SGLIAVYS 462
Query: 258 EFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEK-MRERDDGTWSAMIKVYERKGFEL 316
E C +M + ++ +F+ + E D W++MI + +
Sbjct: 463 E------------CEKM----------EISECIFDDCINELDIACWNSMISGFRHNMLDT 500
Query: 317 EALGLFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
+AL LF RM + N HGRQ H +V+S + D +V +AL
Sbjct: 501 KALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETAL 560
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
MY KCG++ A+ F+ K+ V+WN MI GY +G G+EA+ ++R M SG PD
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Query: 436 ISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVE 495
I+F+ VL+ACS+SG V+ G EI SM+ + +EP ++HY C+VD LGRAG++ DA ++ E
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 496 KMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWED 555
P + +++W LL +CR H + LA EKL +L+P+++ YVLLS+ Y+S +W+D
Sbjct: 681 ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDD 740
Query: 556 VEVVREKIKTRSVIKLPGYSW 576
++ + V K PG SW
Sbjct: 741 SAALQGLMNKNRVHKTPGQSW 761
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 159/642 (24%), Positives = 280/642 (43%), Gaps = 108/642 (16%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y G + ARKVFDE R SWNA + + +A +F+ PE+++VSWN
Sbjct: 51 YIECGDGDYARKVFDEMSV--RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNN 108
Query: 88 MVS-----GFVKNGMVAEARRVFDA-MPVR------------------------------ 111
M+S GF + +V R V D +P R
Sbjct: 109 MISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG 168
Query: 112 ---NVVSWTSMVRGYVQEGN-VEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF 167
N+ +++ Y + G V+ R+F + + N VS+T ++GGL ++++V +A ++F
Sbjct: 169 LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 168 DMMPVK----DVVAVTNMIG-GYCEEGRLEEARALFDEMPKR------------NVVTWT 210
+M K D V ++N++ EG + +E+ K+ ++
Sbjct: 229 RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP 267
+++ YA+N+ ++ A +F MPE N VSW M++G+ R ++ EF M +P
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 268 VVACNEMIMGFGF-DGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ 326
++G F GDV+ + +F + + W+AM+ Y EA+ F +MQ
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 327 REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
+ + + G+Q+H ++R+E ++ ++ S LI +Y +C +
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 387 RAKWIFNRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV-PPDDISFIGVLSA 444
++ IF+ + D+ WNSMI+G+ + L +AL +FR M + V P++ SF VLS+
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 445 CSYSGKVKEGREI------------------FESMKCKY-QVEPGIEHYAC--------- 476
CS + GR+ M CK +++ + +
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 477 --MVDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
M+ G G+ ++AV + KM +PD I + S+L AC +H L E +E L+
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC-SHS--GLVETGLEILSS 645
Query: 532 ------LEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
+EP+ Y+ + GR ED E + E +S
Sbjct: 646 MQRIHGIEPE-LDHYICIVDCLGRAGRLEDAEKLAEATPYKS 686
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 44/197 (22%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKC------------------------------ 382
G+ +H +VR D Y+ + L+ +Y++C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 383 -GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
GDL A +F+ P +DVV WN+MI+ + G E+AL V++ M G P + V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 442 LSACSYSGKVKEGREIFESMKC-----KYQVEPGIEHYACMVDLLGRAGQVND-AVEIVE 495
LSACS KV +G +F M+C K ++ I ++ + + G + D V + E
Sbjct: 145 LSACS---KVLDG--VF-GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 496 KMPMEPDAIVWGSLLGA 512
+ +P+ + + +++G
Sbjct: 199 SLS-QPNEVSYTAVIGG 214
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 264/538 (49%), Gaps = 41/538 (7%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM- 139
+ V N ++S + K R+VFD M R+ VS+ S++ Q+G + EA +L M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 140 -----PEKNVVSWTVML----GGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGR 190
P+ +V+ + L G K +R+ A L D + V+ T ++ Y +
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN-------------- 236
A +FD+M +N V+WT M+SG N+ ++ LF M N
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 237 --EVSWTAMLMGYTHSGRMRE---ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF 291
E+++ + L+ H R A E A + C G+V ++ +F
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC----------GNVSLSRVLF 310
Query: 292 EKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
E + RD WS+MI Y G E + L +M++EG N
Sbjct: 311 ETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS 370
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
VH+++++ F + + +ALI MY KCG L A+ +F KD+V W+SMI Y
Sbjct: 371 FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG 430
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
HG G EAL +F+ M G DD++F+ +LSAC+++G V+E + IF + KY + +
Sbjct: 431 LHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTL 489
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA-EVAVEKLA 530
EHYAC ++LLGR G+++DA E+ MPM+P A +W SLL AC TH +LD+A ++ +L
Sbjct: 490 EHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELM 549
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVG 588
+ EP N YVLLS ++ G + E VR ++ R + K G+S IE E + + G
Sbjct: 550 KSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDYQG 607
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 195/501 (38%), Gaps = 61/501 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAA-----------------YFQ 63
S IS YA+ + RKVFDE +HR T S+ +++ + YF
Sbjct: 85 SNSLISMYAKFSRKYAVRKVFDEM--LHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFY 142
Query: 64 AHQPH------------------------QAVTLFETTPEKNIVSWNGMVSGFVKNGMVA 99
P A+ L + +++++ +V ++K A
Sbjct: 143 GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHA 202
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK--- 156
A VFD M V+N VSWT+M+ G V N E LF M +N+ V L +L
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 157 -----DSRVEDARKL-FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
S V++ F D + YC G + +R LF+ R+VV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 211 TMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREA----SEFFDA 262
+M+SGYA L M E N V+ A++ T+S + A S+
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
+ ++ N +I + G + A+ VF ++ E+D +WS+MI Y G EAL +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
M + G ++ + + + + + L + I + +
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRF 502
Query: 383 GDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGV 441
G + A + P+K +W+S+++ HG + A + + + P + +++ +
Sbjct: 503 GKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLL 562
Query: 442 LSACSYSGKVKEGREIFESMK 462
+ SG E+ M+
Sbjct: 563 SKIHTESGNYHAAEEVRRVMQ 583
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 32/330 (9%)
Query: 19 CTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
CT G+ S+ AR+ +A + DE + + A+V Y + A +F+
Sbjct: 158 CTRMGSSSKVARMF---HALVLVDE--RMQESVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQ----EGNVE 130
KN VSW M+SG V N +F AM N+ V+ S++ V+ V+
Sbjct: 213 VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK 272
Query: 131 EAERLFWR----MPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC 186
E +R E+ ++ M + V +R LF+ V+DVV ++MI GY
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYA 329
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW-- 240
E G E L ++M K N VT +VS + + A + + + +S
Sbjct: 330 ETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHIL 389
Query: 241 --TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM---- 294
A++ Y G + A E F + K +V+ + MI +G G A +F+ M
Sbjct: 390 LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGG 449
Query: 295 RERDDGTWSAMIKVYERKGFELEALGLFAR 324
E DD + A++ G EA +F +
Sbjct: 450 HEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G Q+H +++ D D V+++LI+MY K + +F+ +D V + S+I Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM-KCKYQVEPGI 471
GL EA+ + ++M G P +L+ C+ G + +F ++ +++ +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
+VD+ + A + ++M ++ + + W +++ C + E+ V+
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNE-VSWTAMISGCVANQNY---EMGVDLFRA 241
Query: 532 LEPKNAGP 539
++ +N P
Sbjct: 242 MQRENLRP 249
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 195/742 (26%), Positives = 334/742 (45%), Gaps = 89/742 (11%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT-------PEK 80
Y++ GQ + A ++F + T SW M+++ A + +A+ + E
Sbjct: 169 YSKCGQFKEACELFSSLQNAD--TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEF 226
Query: 81 NIVSWNGMVSGF-VKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
V G S ++ G + + +P+ NVV TS+V Y Q +E+A R+
Sbjct: 227 TFVKLLGASSFLGLEFGKTIHSNIIVRGIPL-NVVLKTSLVDFYSQFSKMEDAVRVLNSS 285
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLF------DMMP---------------------- 171
E++V WT ++ G +++ R ++A F + P
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 172 ----------VKDVVAVTN-MIGGY--CEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
+D V N ++ Y C +E +R +F M NVV+WTT++ G
Sbjct: 346 QIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVD 404
Query: 219 NRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VA 270
+ V L M +R N V+ + +L + +R E + + V V
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVV 464
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
N ++ + VD A V M+ RD+ T+++++ + G AL + M +G
Sbjct: 465 GNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
++ + G+ +H V+S F V ++L+ MY KCG L AK
Sbjct: 525 RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
+F DVV WN +++G + +G AL+ F +M + PD ++F+ +LSACS
Sbjct: 585 VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRL 644
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
G E F+ MK Y +EP +EHY +V +LGRAG++ +A +VE M ++P+A+++ +LL
Sbjct: 645 TDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLL 704
Query: 511 GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIK 570
ACR L L E K L P + Y+LL+ +Y G+ E + R + + + K
Sbjct: 705 RACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSK 764
Query: 571 LPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEE 630
G S +EV+ K H FV D + +++ +G+ + + ++EE
Sbjct: 765 KLGKSTVEVQGKVHSFVSED----------VTRVDKTNGIYAE----------IESIKEE 804
Query: 631 EK--------THSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTG 682
K + +HS K A+ YG + P+ V+KN +C DCH + ++ ++
Sbjct: 805 IKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVD 864
Query: 683 REIIVRDANRFHHFKDGYCSCK 704
++I VRD N+ H FK+G CSCK
Sbjct: 865 KKITVRDGNQVHIFKNGECSCK 886
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 138/603 (22%), Positives = 247/603 (40%), Gaps = 91/603 (15%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE------TTP 78
+S Y + I NARK+FDE H RT +W M++A+ ++ + A++LFE T P
Sbjct: 65 LSLYLKTDGIWNARKLFDEMSH--RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHP 122
Query: 79 EKNI-------------VSWNGMVSGFV--------------------KNGMVAEARRVF 105
+ +S+ G V G V K G EA +F
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSR---VED 162
++ + +SWT M+ V EA + + M + V LL S +E
Sbjct: 183 SSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF 242
Query: 163 ARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
+ + + V+ +VV T+++ Y + ++E+A + + +++V WT++VSG+ R
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 219 NRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEM 274
N R A F M + N +++A+L + R + + + +K
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAIL-SLCSAVRSLDFGKQIHSQTIK-------- 353
Query: 275 IMGFGFDGDVDR---------------AKAVFEKMRERDDGTWSAMIKVYERKGFELEAL 319
+GF DV A VF M + +W+ +I GF +
Sbjct: 354 -VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
GL M + N ++HA L+R D ++ V ++L+ Y
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 380 VKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
+ A + +D + + S++T +++ G E AL+V M G+ D +S
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP 532
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA----CMVDLLGRAGQVNDAVEIVE 495
G +SA + G ++ G+ + C Y V+ G A +VD+ + G + DA ++ E
Sbjct: 533 GFISASANLGALETGKH----LHC-YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 496 KMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE--KLAQLEPKNAGPYVLLSHMYASKGRW 553
++ PD + W L+ ++ + A A E ++ + EP + +LLS S GR
Sbjct: 588 EIAT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA--CSNGRL 644
Query: 554 EDV 556
D+
Sbjct: 645 TDL 647
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 196/454 (43%), Gaps = 32/454 (7%)
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+N+ N ++S ++K + AR++FD M R V +WT M+ + + A LF M
Sbjct: 56 ENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEM 115
Query: 140 ------PEKNVVSWTVMLGGLLKD----SRVEDA--RKLFDMMPVKDVVAVTNMIGGYCE 187
P + S V L+D RV + + F+ + V +++ Y +
Sbjct: 116 MASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE----GNSVVGSSLSDLYSK 171
Query: 188 EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAM 243
G+ +EA LF + + ++WT M+S R+ A + + M + NE ++ +
Sbjct: 172 CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 244 LMGYT----HSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
L + G+ ++ +P+ VV ++ + ++ A V E+D
Sbjct: 232 LGASSFLGLEFGKTIHSNIIVRGIPLN-VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
W++++ + R EA+G F M+ G N D G+Q+H++
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 360 LVRSEFDQDLYVASALITMYVKC-GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
++ F+ V +AL+ MY+KC V A +F +VV W ++I G HG ++
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE--SMKCKYQVEPGIEHYAC 476
+ +M V P+ ++ GVL ACS K++ R + E + + V+ +
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACS---KLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 477 MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+VD + +V+ A ++ M D I + SL+
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMK-RRDNITYTSLV 500
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G +H +++ ++L + + L+++Y+K + A+ +F+ + V W MI+ +++
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
AL++F +M SG P++ +F V+ +C+ + G + S+ K E
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV-IKTGFEGNSV 160
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW----GSLLGA 512
+ + DL + GQ +A E+ + D I W SL+GA
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMISSLVGA 203
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 233/437 (53%), Gaps = 42/437 (9%)
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
+++SGY+ + D A +LF+ +++ V+WTAM+ G+ +G EA +F M K V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK-KTGV 200
Query: 270 ACNEMIM-------------GFG-----------------FDGD-----------VDRAK 288
A NEM + FG F G D A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
VF++M R+ TW+A+I Y + + + +F M + A N
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
GR+VH ++++ + + + LI +YVKCG L A +F R K+V W +MI
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
G++ HG +A ++F M S V P++++F+ VLSAC++ G V+EGR +F SMK ++ +E
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 469 PGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
P +HYACMVDL GR G + +A ++E+MPMEP +VWG+L G+C H +L + A +
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 529 LAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVG 588
+ +L+P ++G Y LL+++Y+ W++V VR+++K + V+K PG+SWIEV+ K F+
Sbjct: 501 VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIA 560
Query: 589 GDNNCHPEQPIIMKMLE 605
D+ E + K L+
Sbjct: 561 FDDKKPLESDDLYKTLD 577
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 23/343 (6%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N ++SG+ +G+ A R+FD ++VV+WT+M+ G+V+ G+ EA F M + V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 146 SWTVMLGGLLKDS-RVEDAR-------KLFDMMPVK-DVVAVTNMIGGYCEEGRLEEARA 196
+ + + +LK + +VED R + VK DV ++++ Y + ++A+
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGR 252
+FDEMP RNVVTWT +++GY ++R D +FE M + NE + +++L H G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 253 MREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKV 308
+ M + A +I + G ++ A VFE++ E++ TW+AMI
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 309 YERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL---VRSEF 365
+ G+ +A LF M + N + GR++ + E
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 366 DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV-VMWNSMI 407
D Y + ++ ++ + G L AK + R P++ V+W ++
Sbjct: 442 KADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 93/343 (27%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF--------- 105
N++++ Y + A LF+ +K++V+W M+ GFV+NG +EA F
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 106 -DAMPVRNV---------VSWTSMVRG-YVQEGNV--------------------EEAER 134
+ M V +V V + V G Y++ G V ++A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 135 LFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV------------------- 175
+F MP +NVV+WT ++ G ++ + +F+ M DV
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 176 --------------------VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
A T +I Y + G LEEA +F+ + ++NV TWT M++G
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 216 YARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM-------P 264
+A + A LF M NEV++ A+L H G + E F +M P
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKM-RERDDGTWSAMI 306
AC M+ FG G ++ AKA+ E+M E + W A+
Sbjct: 442 KADHYAC--MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
+ + Y + ++A+KVFDE P R +W A++A Y Q+ + + +FE + +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMP--SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 82 IV----SWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAE 133
+ + + ++S G + RRV M N + T+++ YV+ G +EEA
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEG 189
+F R+ EKNV +WT M+ G DA LF M V V ++ G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 190 RLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARKLFEVMP-ERNEVSWTAM 243
+EE R LF M R + MV + R ++ A+ L E MP E V W A+
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 244 L 244
Sbjct: 482 F 482
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
Q HA +V+ D D +V ++LI+ Y G A +F+ KDVV W +MI G+ ++G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREI----FESMKCKYQVEPG 470
EA+ F +M +GV ++++ + VL A V+ GR + E+ + K V G
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+ +VD+ G+ +DA ++ ++MP + + W +L+
Sbjct: 244 ----SSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAG 280
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 117/269 (43%), Gaps = 30/269 (11%)
Query: 20 TSTGAISRYARIGQIENARKV--FDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T + +S A +G + R+V + I T++ ++ Y + +A+ +FE
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAE 133
EKN+ +W M++GF +G +A +F M +V V++ +++ G VEE
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 134 RLFWRMP-----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYC-- 186
RLF M E + M+ + +E+A+ L + MP++ V + G C
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 187 ----EEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV---- 238
E G+ +R + ++ + +T + + Y+ ++ D ++ + M ++ V
Sbjct: 488 HKDYELGKYAASRVI--KLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPG 545
Query: 239 -SWTAMLMGYTHSGRMREASEFFDAMPVK 266
SW + G++ E F D P++
Sbjct: 546 FSWIEV------KGKLCEFIAFDDKKPLE 568
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 272/547 (49%), Gaps = 20/547 (3%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP 140
++V + +V + K + + +VFD MP R+V SW +++ + Q G E+A LF RM
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 141 ----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLE 192
E N VS TV + + +E +++ K D + ++ Y + LE
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 193 EARALFDEMPKRNVVTWTTMVSGYA----RNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
AR +F +MP++++V W +M+ GY V++ ++ ++ + T++LM +
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 249 HSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWS 303
S + +F ++ VV + + D G+ + A+ VF K ++ +W+
Sbjct: 321 RSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
MI Y G +A+ ++ +M G + + G+Q+H + S
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVF 423
+ D + SAL+ MY KCG+ A IFN P KDVV W MI+ Y HG EAL F
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQF 499
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+M G+ PD ++ + VLSAC ++G + EG + F M+ KY +EP IEHY+CM+D+LGR
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 484 AGQVNDAVEIVEKMPMEPD-AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 542
AG++ +A EI+++ P D A + +L AC H++ L + L + P +A Y++
Sbjct: 560 AGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMV 619
Query: 543 LSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMK 602
L ++YAS W+ VR K+K + K PG SWIE+ K F D + H + +
Sbjct: 620 LFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRS-HLRAENVYE 678
Query: 603 MLERLDG 609
L L G
Sbjct: 679 CLALLSG 685
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 218/489 (44%), Gaps = 47/489 (9%)
Query: 44 TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP-EKNIVSWNGMVSGFVKNGMVAEAR 102
T + R +++ YF A +FE ++ WN ++SG+ KN M +
Sbjct: 32 TLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTL 91
Query: 103 RVFD-----AMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD 157
VF ++ V + ++ ++++ Y G R F LG ++
Sbjct: 92 EVFKRLLNCSICVPDSFTFPNVIKAYGALG------REF--------------LGRMIHT 131
Query: 158 SRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
V+ V DVV ++++G Y + E + +FDEMP+R+V +W T++S +
Sbjct: 132 LVVKSGY-------VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 218 RNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
++ + A +LF M E N VS T + + + E VK +E
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC-VKKGFELDE 243
Query: 274 MIMG-----FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
+ +G ++ A+ VF+KM + W++MIK Y KG + + RM E
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G + HG+ +H ++RS + D+YV +LI +Y KCG+ A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 389 KWIFNRYPLKDVV-MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
+ +F++ KDV WN MI+ Y G +A+ V+ M GV PD ++F VL ACS
Sbjct: 364 ETVFSKTQ-KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWG 507
+++G++I S+ + ++E + ++D+ + G +A I +P + D + W
Sbjct: 423 LAALEKGKQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWT 480
Query: 508 SLLGACRTH 516
++ A +H
Sbjct: 481 VMISAYGSH 489
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 181/434 (41%), Gaps = 62/434 (14%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----ET 76
++ + YA+ EN+ +VFDE P R +SWN +++ ++Q+ + +A+ LF +
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPE--RDVASWNTVISCFYQSGEAEKALELFGRMESS 202
Query: 77 TPEKNIVSWNGMVSG--------------------------FVKNGMV---------AEA 101
E N VS +S +V + +V A
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-PEKNVVSWTVMLGGLLKDSRV 160
R VF MP +++V+W SM++GYV +G+ + + RM E S T + L+ SR
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Query: 161 EDAR--KLFDMMPVKDVVAV-----TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
+ K ++ VV ++I Y + G A +F + K +W M+
Sbjct: 323 RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMI 382
Query: 214 SGYAR----NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
S Y + V+V ++ V + + V++T++L + + + + ++ + +
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRL 441
Query: 270 ACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
+E+++ D G+ A +F + ++D +W+ MI Y G EAL F
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA--SALITMYVKC 382
MQ+ G + D G + +++ RS++ + + S +I + +
Sbjct: 502 MQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM-RSKYGIEPIIEHYSCMIDILGRA 560
Query: 383 GDLVRAKWIFNRYP 396
G L+ A I + P
Sbjct: 561 GRLLEAYEIIQQTP 574
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 21/195 (10%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQ 412
+ VH R++ +D+ + +LI +Y C D A+ +F + ++ DV +WNS+++GYS+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 413 HGLGEEALNVF-RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+ + + L VF R + S PD +F V+ A Y GRE M V+ G
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGAL---GREFLGRMIHTLVVKSG- 137
Query: 472 EHYACMV----DLLGRAGQVN---DAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEV 524
Y C V L+G + N +++++ ++MP E D W +++ + AE
Sbjct: 138 --YVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISC---FYQSGEAEK 191
Query: 525 AVEKLAQLEPKNAGP 539
A+E ++E P
Sbjct: 192 ALELFGRMESSGFEP 206
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 184/653 (28%), Positives = 319/653 (48%), Gaps = 77/653 (11%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY--------------- 61
F C S + Y + G+ +NA +F+ + SWN +++ +
Sbjct: 110 FVCVSNAVMGMYRKAGRFDNALCIFENL--VDPDVVSWNTILSGFDDNQIALNFVVRMKS 167
Query: 62 ----FQAHQPHQAV-----------------TLFETTPEKNIVSWNGMVSGFVKNGMVAE 100
F A A+ T+ +T E ++V N ++ + ++G
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVE-EAERLFWRMPEKNV----VSWTVMLGGLL 155
ARRVFD M ++++SW S++ G QEG EA +F M + V VS+T ++
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 156 KDSRVEDARKLFDMM---PVKDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
++ ++ AR++ + + ++ V N ++ Y + G LE +++F +M +RNVV+WTT
Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTT 347
Query: 212 MVSGYARNRRVDVARKLFE-VMPERNEVSWTAMLMGYTHSGRMREASEFF-----DAMPV 265
M+S + F+ V P NEV++ ++ + +++E +
Sbjct: 348 MISSNKDDAVSIFLNMRFDGVYP--NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
+P V N I + ++ AK FE + R+ +W+AMI + + GF EAL +F
Sbjct: 406 EPSVG-NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 326 QRE--------GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
E G+ LN G++ HA L++ + V+SAL+
Sbjct: 465 AAETMPNEYTFGSVLN-------AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 378 MYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
MY K G++ ++ +FN K+ +W S+I+ YS HG E +N+F M V PD ++
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
F+ VL+AC+ G V +G EIF M Y +EP EHY+CMVD+LGRAG++ +A E++ ++
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 498 PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVE 557
P P + S+LG+CR H + + E +++P+ +G YV + ++YA K W+
Sbjct: 638 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 697
Query: 558 VVREKIKTRSVIKLPGYSWIEV---EKKAHM--FVGGDNNCHPEQPIIMKMLE 605
+R+ ++ ++V K G+SWI+V E M F GD + HP+ I +M+E
Sbjct: 698 EIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKS-HPKSDEIYRMVE 749
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G Q+H S F + V++A++ MY K G A IF DVV WN++++G+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+ + ALN M +GV D ++ LS C S G ++ +S K +E +
Sbjct: 155 NQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL-QSTVVKTGLESDLV 210
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ + R+G A + ++M + D I W SLL
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLL 247
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/600 (29%), Positives = 286/600 (47%), Gaps = 54/600 (9%)
Query: 16 RFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY-------------- 61
RF T ++ Y + G + +A+ +FDE P R T WNA++ Y
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPE--RDTVVWNALICGYSRNGYECDAWKLFI 140
Query: 62 --FQAHQPHQAVTLFETTP---EKNIVSW--------------------NGMVSGFVKNG 96
Q A TL P + VS N ++S + K
Sbjct: 141 VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 97 MVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK 156
+ A +F M ++ VSW +M+ Y Q G EEA +F M EKNV V + LL
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 157 DSRVEDARKLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ + V D+ VT+++ Y G L A L+ + ++V T++VS
Sbjct: 261 AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 215 GYARNRRVDVARKLF----EVMPERNEVSWTAMLMGYTHS-----GRMREASEFFDAMPV 265
YA +D+A F ++ + + V+ +L G S G +
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCT 380
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
K +V + M FD DV+ +FE+++E +W+++I + G A +F +M
Sbjct: 381 KTLVVNGLITMYSKFD-DVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 326 QREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
G L + + G+++H +R+ F+ + +V +ALI MY KCG+
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
V+A+ +F WNSMI+GYS GL AL+ + +M G+ PD+I+F+GVLSA
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C++ G V EG+ F +M ++ + P ++HYA MV LLGRA +A+ ++ KM ++PD+
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK 564
VWG+LL AC H +L++ E K+ L+ KN G YVL+S++YA++ W+DV VR +K
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 203/485 (41%), Gaps = 26/485 (5%)
Query: 41 FDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAE 100
F + + TT+S+N+ F+ L ++ ++ + +++ ++K G V
Sbjct: 49 FTMSIFLQATTTSFNS-----FKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS 103
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL----K 156
A+ +FD MP R+ V W +++ GY + G +A +LF M ++ L LL +
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ 163
Query: 157 DSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
V R + + D +I Y + L A LF EM ++ V+W TM
Sbjct: 164 CGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTM 223
Query: 213 VSGYARNRRVDVARKLFEVMPERN-EVSWTAML-MGYTHSGRMREASEFFDAMPVKPVVA 270
+ Y+++ + A +F+ M E+N E+S ++ + H V +
Sbjct: 224 IGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISV 283
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
++ + G + A+ ++ ++ ++++ Y KG A+ F++ ++
Sbjct: 284 VTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 343
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
++ D G +H ++S V + LITMY K D+ +
Sbjct: 344 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 403
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSG 449
+F + ++ WNS+I+G Q G A VF M L+ G+ PD I+ +L+ CS
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 450 KVKEGREIFESMKCKYQVEPGI--EHYAC--MVDLLGRAGQVNDAVEIVEKMPMEPDAIV 505
+ G+E+ Y + E++ C ++D+ + G A E V K P
Sbjct: 464 CLNLGKELH-----GYTLRNNFENENFVCTALIDMYAKCGNEVQA-ESVFKSIKAPCTAT 517
Query: 506 WGSLL 510
W S++
Sbjct: 518 WNSMI 522
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
QV L +S D+ +YV ++L+ +Y+K G + A+ +F+ P +D V+WN++I GYS++G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
+A +F M G P + + +L C G V +GR + + K +E +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVK 189
Query: 475 ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP 534
++ + ++ A E++ + + + W +++GA + + L E A+ +
Sbjct: 190 NALISFYSKCAELGSA-EVLFREMKDKSTVSWNTMIGA---YSQSGLQEEAITVFKNMFE 245
Query: 535 KN 536
KN
Sbjct: 246 KN 247
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 277/535 (51%), Gaps = 20/535 (3%)
Query: 96 GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTV 149
G ++ AR+VFD +P R V + SM+ Y + N +E RL+ +M P+ + + T+
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 150 --MLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV 207
L GL+ + K D DV ++++ Y + G+++EA LF +M KR+V+
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMPE----RNEVSWTAML-----MGYTHSGRMREASE 258
WTTMV+G+A+ + A + + M R+ V +L +G T GR
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 259 FFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA 318
+ +P+ VV + + M + G ++ A VF +M + +W ++I + + G +A
Sbjct: 244 YRTGLPMNVVVETSLVDM-YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
MQ G + GR VH +++ D A+AL+ M
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDM 361
Query: 379 YVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISF 438
Y KCG L ++ IF KD+V WN+MI+ Y HG G+E +++F M S + PD +F
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 439 IGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP 498
+LSA S+SG V++G+ F M KY+++P +HY C++DLL RAG+V +A++++
Sbjct: 422 ASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEK 481
Query: 499 MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEV 558
++ +W +LL C H L + ++A K+ QL P + G L+S+ +A+ +W++V
Sbjct: 482 LDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAK 541
Query: 559 VREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRD 613
VR+ ++ ++ K+PGYS IEV + F+ D + H E ++++L L +RD
Sbjct: 542 VRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLS-HHEHYHMLQVLRNLKTEIRD 595
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 174/405 (42%), Gaps = 61/405 (15%)
Query: 212 MVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP- 267
+++ R + ARK+F+ +P+R + +M++ Y+ E +D M ++P
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 268 -------VVACNEMI------------MGFGFDGDV----------------DRAKAVFE 292
+ AC + + FG+ DV D A+ +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 293 KMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH 352
KM +RD W+ M+ + + G L+A+ + MQ EG +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
GR VH L R+ ++ V ++L+ MY K G + A +F+R K V W S+I+G++Q
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+GL +A +M G PD ++ +GVL ACS G +K GR + K V +
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR-LVHCYILKRHVLDRVT 354
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH--------MKLDLAEV 524
A M D+ + G ++ + EI E + D + W +++ H + L + E
Sbjct: 355 ATALM-DMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE- 411
Query: 525 AVEKLAQLEPKNAGPYVLLSHMYAS----KGR-WEDVEVVREKIK 564
+ +EP +A LLS + S +G+ W V + + KI+
Sbjct: 412 -----SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQ 451
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 5/267 (1%)
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
++I G G++ A+ VF+++ +R +++MI VY R E L L+ +M E
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
+ + G V + V + D++V S+++ +Y+KCG + A+ +F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
+ +DV+ W +M+TG++Q G +A+ +R+M G D + +G+L A G K
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
GR + + + + + +VD+ + G + A + +M M A+ WGSL+
Sbjct: 235 MGRSVHGYLY-RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-MFKTAVSWGSLISG 292
Query: 513 CRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ LA A E + +++ P
Sbjct: 293 FAQN---GLANKAFEAVVEMQSLGFQP 316
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 198/480 (41%), Gaps = 70/480 (14%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-- 82
I+ RIG+I ARKVFDE P R S +N+M+ Y + P + + L++ + I
Sbjct: 57 IASCGRIGEISYARKVFDELP--QRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 83 ------VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
++ +SG V A + D +V +S++ Y++ G ++EAE LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLE 192
+M +++V+ WT M+ G + + A + + M +D V + ++ + G +
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 193 EARA----LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
R+ L+ NVV T++V YA+ ++VA ++F M + VSW +++ G+
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 249 HSGRMREASEFFDAMP-----------VKPVVACNE------------------------ 273
+G +A E M V +VAC++
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT 354
Query: 274 ---MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
++ + G + ++ +FE + +D W+ MI Y G E + LF +M
Sbjct: 355 ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLV---RSEFDQDLYVASALITMYVKCGDLVR 387
+ + G+ + ++ + + + YV LI + + G +
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV--CLIDLLARAGRVEE 472
Query: 388 AKWIFNRYPLKDVV-MWNSMITGYSQH---GLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
A + N L + + +W ++++G H +G+ A N + PD I ++S
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQL-----NPDSIGIQTLVS 527
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 352 HGRQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
H Q+HA ++ + ++ LI + G++ A+ +F+ P + V ++NSMI Y
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
S+ +E L ++ M + PD +F + AC SG V E E + +
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC-LSGLVLEKGEAVWCKAVDFGYKND 150
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ + +++L + G++++A + KM + D I W +++
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMV 189
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 257/520 (49%), Gaps = 54/520 (10%)
Query: 113 VVSWTSMVRGYVQEGNVEEAERLFWRMP--EKNVVSWTVMLGGLLKDSRV--EDARKLFD 168
VV +S+ Y+Q ++ A F R+P ++N SW +L G K D L++
Sbjct: 39 VVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYN 98
Query: 169 MM--------PVKDVVAVTNMIG-GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN 219
M V A+ +G G E G L A+ + + K + V ++V YA+
Sbjct: 99 RMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQL 157
Query: 220 RRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR----------MREASEFFDAMPVKPVV 269
++ A+K+F+ +P RN V W ++ GY + MR+ DA+ + +V
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 270 -ACNEMIMG--------------FGFDGD---------------VDRAKAVFEKMRERDD 299
AC + G F D +D A+ +FE +R+
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
W+ +I + + +EA LF +M RE N HG+ VH
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEA 419
++R+ + D ++ I MY +CG++ A+ +F+ P ++V+ W+SMI + +GL EEA
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 420 LNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD 479
L+ F M V P+ ++F+ +LSACS+SG VKEG + FESM Y V P EHYACMVD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
LLGRAG++ +A ++ MP++P A WG+LL ACR H ++DLA EKL +EP+ +
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Query: 540 YVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEV 579
YVLLS++YA G WE V VR K+ + K G S EV
Sbjct: 518 YVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 60/365 (16%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP-HQAVTLFETTPEKN---IV 83
Y + +++ A F+ P R SWN +++ Y ++ + V L ++ +
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 84 SWNGMVS-------GFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF 136
S+N + + G ++NG++ + + + + V+ S+V Y Q G +E A+++F
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQLGTMESAQKVF 167
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP-----------VKDVVAVTNMIGG- 184
+P +N V W V++ G LK S+ + +LF +M + V A N+ G
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 185 ----------------------------YCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
Y + L+ AR LF+ RNVV WTT++SG+
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGF 287
Query: 217 ARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV---- 268
A+ R A LF M N+ + A+L+ + G +R M +
Sbjct: 288 AKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDA 347
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
V I + G++ A+ VF+ M ER+ +WS+MI + G EAL F +M+ +
Sbjct: 348 VNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ 407
Query: 329 GAALN 333
N
Sbjct: 408 NVVPN 412
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 64/342 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----ETTPEK 80
+ YA++G +E+A+KVFDE P R + W ++ Y + + + LF +T
Sbjct: 151 VEMYAQLGTMESAQKVFDEIP--VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 81 NIVSWNGMVSG------------------------------------FVKNGMVAEARRV 104
+ ++ +V +VK ++ AR++
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD----SRV 160
F+ RNVV WT+++ G+ + EA LF +M ++++ L +L +
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSL 328
Query: 161 EDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
+ + M D V T+ I Y G ++ AR +FD MP+RNV++W++M++ +
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Query: 217 ARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM-------PV 265
N + A F M + N V++ ++L +HSG ++E + F++M P
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT-WSAMI 306
+ AC M+ G G++ AK+ + M + + W A++
Sbjct: 449 EEHYAC--MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 55/267 (20%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI-- 82
I Y + ++NARK+F+ + + R W +++ + + + +A LF ++I
Sbjct: 253 IDMYVKCRLLDNARKLFETS--VDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 83 -------------------------------------VSWNGMVSGFVKNGMVAEARRVF 105
V++ + + + G + AR VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK----DSRVE 161
D MP RNV+SW+SM+ + G EEA F +M +NVV +V LL V+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 162 DARKLFDMMP-----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVT-WTTMVSG 215
+ K F+ M V + M+ G + EA++ D MP + + + W ++S
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Query: 216 YARNRRVD----VARKLFEVMPERNEV 238
++ VD +A KL + PE++ V
Sbjct: 491 CRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL--KDVVMWNSMIT 408
+H +QVHA+++ F+ ++ + S+L Y++ L A FNR P ++ WN++++
Sbjct: 21 NHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILS 80
Query: 409 GYSQHGLG--EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
GYS+ + L ++ M D + + + AC G ++ G + + K
Sbjct: 81 GYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI-LIHGLAMKNG 139
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++ +V++ + G + A ++ +++P+ ++++WG L+
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 238/429 (55%), Gaps = 15/429 (3%)
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMV-SGYA 217
AR++FD +P + A MI GY + G ++E L M K + T + ++ + +
Sbjct: 88 ARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNS 147
Query: 218 RNRRVDVARKLFEVMPER--------NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
R + + R L ++ R ++V TA++ Y SG++ A F+ M + VV
Sbjct: 148 RGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVV 207
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELE-ALGLFARMQRE 328
C MI G+ G V+ A+ +F + +D ++AM++ + R G + ++ ++ MQR
Sbjct: 208 CCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA 267
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
G N + G+QVHA++++S + + S+L+ MY KCG + A
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+ +F++ K+V W SMI GY ++G EEAL +F M + P+ ++F+G LSACS+S
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G V +G EIFESM+ Y ++P +EHYAC+VDL+GRAG +N A E MP PD+ +W +
Sbjct: 388 GLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAA 447
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEP-KNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
LL +C H ++LA +A +L +L K G Y+ LS++YAS +W++V +RE +K R
Sbjct: 448 LLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRR 507
Query: 568 VIKLPGYSW 576
+ K G SW
Sbjct: 508 ISKTIGRSW 516
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 142/275 (51%), Gaps = 27/275 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
A+V Y ++ + A T+FET ++N+V M+SG++ G V +A +F+ V+++V
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 115 SWTSMVRGYVQEGNVEEAER---LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLF 167
+ +MV G+ + G E A+R ++ M N+ ++ ++G + E +++
Sbjct: 239 VYNAMVEGFSRSG--ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVH 296
Query: 168 DMMPVKDVVA----VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVD 223
+ V ++++ Y + G + +AR +FD+M ++NV +WT+M+ GY +N +
Sbjct: 297 AQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPE 356
Query: 224 VARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAM----PVKPVV---ACN 272
A +LF M E N V++ L +HSG + + E F++M +KP + AC
Sbjct: 357 EALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACI 416
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRER-DDGTWSAMI 306
+MG GD+++A M ER D W+A++
Sbjct: 417 VDLMGRA--GDLNKAFEFARAMPERPDSDIWAALL 449
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 55/377 (14%)
Query: 93 VKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLG 152
+K G ++ AR+VFD +P + ++ M+ GY++ G V+E L RM + L
Sbjct: 80 LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 153 GLLKDSRVEDA-----RKLFDMMPVK--------DVVAVTNMIGGYCEEGRLEEARALFD 199
+LK S + R L ++ + D V +T ++ Y + G+LE AR +F+
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR------- 252
M NVV T+M+SGY V+ A ++F ++ V + AM+ G++ SG
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 253 ----MREA------SEFFDAMPVKPVVACNEM-------IMGFG-----------FD--- 281
M+ A S F + V+ +E+ IM G D
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 282 --GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXX 339
G ++ A+ VF++M+E++ +W++MI Y + G EAL LF RM+ N+
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 340 XXXXXXXXXXXDHGRQVHARLVRS-EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
D G ++ + R + + ++ + + GDL +A P +
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 399 -DVVMWNSMITGYSQHG 414
D +W ++++ + HG
Sbjct: 440 PDSDIWAALLSSCNLHG 456
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 88/321 (27%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+++HA ++++ F DL ++ L+ +++KCG L A+ +F+ P + +N MI+GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 413 HGLGEEALNVFRDMCLSG----------------------------------------VP 432
HGL +E L + + M SG V
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 433 PDDISFIGVLSACSYSGKVKEGREIFESMK-----CKYQVEPG----------------- 470
DD+ ++ SGK++ R +FE+MK C + G
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 471 ----IEHYACMVDLLGRAGQVN----DAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
I Y MV+ R+G+ D +++ P+ + S++GAC L
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV---LTSH 289
Query: 523 EVAVEKLAQLEPKNAGPYV----LLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
EV + AQ+ ++ L MYA G D V ++++ ++V +SW
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV-----FSWTS 344
Query: 579 VEKKAHMFVGGDNNCHPEQPI 599
M G N +PE+ +
Sbjct: 345 ------MIDGYGKNGNPEEAL 359
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 24/238 (10%)
Query: 47 IHRTTSSWNAMVAA--YFQAHQPHQAV--TLFETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
H S++ +++ A +H+ Q V + ++ +I + ++ + K G + +AR
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDS 158
RVFD M +NV SWTSM+ GY + GN EEA LF RM E N V++ L
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 159 RVEDARKLFDMM--------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-NVVTW 209
V+ ++F+ M ++ + +++G G L +A MP+R + W
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMG---RAGDLNKAFEFARAMPERPDSDIW 445
Query: 210 TTMVSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM 263
++S + V++ A +LF++ ++ ++ A+ Y + + S+ + M
Sbjct: 446 AALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVM 503
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 249/463 (53%), Gaps = 16/463 (3%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSG 215
+E+ARK+FD PV+D+V+ +I GY + G E+A ++ M V VT +VS
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 216 YARNRRVDVARKLFEVMPE---RNEVSWTAMLMG-YTHSGRMREASEFFDAMPVKPVVAC 271
+ ++ ++ +E + E R + LM ++ G + EA FD + + +V+
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI--KVYERKGFELEALGLFARMQREG 329
MI G+ G +D ++ +F+ M E+D W+AMI V ++G +AL LF MQ
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG--QDALALFQEMQTSN 384
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D G +H + + ++ + ++L+ MY KCG++ A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 390 WIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
+F+ ++ + + ++I G + HG A++ F +M +G+ PD+I+FIG+LSAC + G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
++ GR+ F MK ++ + P ++HY+ MVDLLGRAG + +A ++E MPME DA VWG+L
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L CR H ++L E A +KL +L+P ++G YVLL MY WED + R + R V
Sbjct: 565 LFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
Query: 570 KLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLR 612
K+PG S IEV F+ D + PE K+ +RL L R
Sbjct: 625 KIPGCSSIEVNGIVCEFIVRDKS-RPESE---KIYDRLHCLGR 663
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 171/389 (43%), Gaps = 58/389 (14%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
N + F G + AR+VFD PVR++VSW ++ GY + G E+A ++ M + V
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 145 ---------VSWTVMLGGLLKDSRVEDARKLFDM-MPVKDVVAVTNMIGGYCEEGRLEEA 194
VS MLG L + + K + M + V A+ +M + + G + EA
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM---FSKCGDIHEA 311
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMR 254
R +FD + KR +V+WTTM+SGYAR +DV+RKLF+ M E++ V W AM+ G + R +
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 255 EASEFFDAMP---VKP--------VVACNE----------------------------MI 275
+A F M KP + AC++ ++
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 276 MGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP 335
+ G++ A +VF ++ R+ T++A+I G A+ F M G A +
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARL-VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
GR +++ R + L S ++ + + G L A +
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 395 YPLK-DVVMWNSMITGYSQHG---LGEEA 419
P++ D +W +++ G HG LGE+A
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEKA 580
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 63/380 (16%)
Query: 12 MVQVRFQCTS---TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPH 68
++++R + S +I +A G +ENARKVFDE+P R SWN ++ Y + +
Sbjct: 182 VLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP--VRDLVSWNCLINGYKKIGEAE 239
Query: 69 QAVTLFETTPEKNI----VSWNGMVSG--------------------------------- 91
+A+ +++ + + V+ G+VS
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALM 299
Query: 92 --FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTV 149
F K G + EARR+FD + R +VSWT+M+ GY + G ++ + +LF M EK+VV W
Sbjct: 300 DMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNA 359
Query: 150 MLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR- 204
M+GG ++ R +DA LF M D + + + + + G L+ + + K
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 205 ---NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFD 261
NV T++V YA+ + A +F + RN +++TA++ G G A +F+
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 262 AMPVKPVVACNE-----MIMGFGFDGDVDRAKAVFEKMRERDDGT-----WSAMIKVYER 311
M + +A +E ++ G + + F +M+ R + +S M+ + R
Sbjct: 480 EM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 312 KGFELEALGLFARMQREGAA 331
G EA L M E A
Sbjct: 539 AGLLEEADRLMESMPMEADA 558
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 152/350 (43%), Gaps = 46/350 (13%)
Query: 200 EMPKRNVVTWTTMVSGYARNRRVD--VARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
E PK + + + M+ R D LF+V + S M++G+ R+ S
Sbjct: 132 ENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVS 191
Query: 258 EFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELE 317
+A I F GD++ A+ VF++ RD +W+ +I Y++ G +
Sbjct: 192 HVHNAS-----------IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 318 ALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
A+ ++ M+ EG + + G++ + + + + + +AL+
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 378 MYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL---------------------- 415
M+ KCGD+ A+ IF+ + +V W +MI+GY++ GL
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 416 ---------GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
G++AL +F++M S PD+I+ I LSACS G + G I ++ KY
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE-KYS 419
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
+ + +VD+ + G +++A+ + + +++ + +++G H
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALH 468
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 10/257 (3%)
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXX---X 340
+D + + + + + +W+ I+ + E+ L+ +M R G + P
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV 400
G + +++ + +V +A I M+ CGD+ A+ +F+ P++D+
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
V WN +I GY + G E+A+ V++ M GV PDD++ IG++S+CS G + G+E +E
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIV-WGSLLGACRTHMKL 519
+K + + I ++D+ + G +++A I + +E IV W +++ + +
Sbjct: 283 VK-ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN--LEKRTIVSWTTMISG---YARC 336
Query: 520 DLAEVAVEKLAQLEPKN 536
L +V+ + +E K+
Sbjct: 337 GLLDVSRKLFDDMEEKD 353
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 177/648 (27%), Positives = 312/648 (48%), Gaps = 65/648 (10%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY------------------FQAHQ 66
IS Y R G +E ARKVFD+ PH R S+NA+ +AY F+ +
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPH--RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 67 PHQAV----------------------TLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
P+ + + + N+V ++ + G + ARR+
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRV 160
FD + R+ V+W +M+ G ++ +E+ F M V +++++L G K
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 161 EDARKLFDMMPVKDVVA---VTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
+ + + V D +A + N ++ YC G + EA +F + N+V+W +++SG
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 217 ARN----RRVDVARKLFEV-MPERNEVSWTAMLMGYTHSGRMREASEFFDAMPV----KP 267
+ N + + + R+L + P +E +++A + R + +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
V ++ + + + + A+ VF+ M+ERD W+ MI + R G A+ F M R
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
E + G H +R+ FD + V AL+ MY K G
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 388 AKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
A+ IF+ D+ WNSM+ YSQHG+ E+AL+ F + +G PD ++++ +L+ACS+
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH 616
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM-EPDAIVW 506
G +G+ ++ MK + ++ G +HY+CMV+L+ +AG V++A+E++E+ P A +W
Sbjct: 617 RGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELW 675
Query: 507 GSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
+LL AC L + A E++ +L+P++ ++LLS++YA GRWEDV +R KI+
Sbjct: 676 RTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGL 735
Query: 567 SVIKLPGYSWIEV-EKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRD 613
+ K PG SWIEV +F GD + +PE ++ + + L+ L R+
Sbjct: 736 ASSKDPGLSWIEVNNNNTQVFSSGDQS-NPE--VVSQAQDELNRLKRN 780
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 221/478 (46%), Gaps = 50/478 (10%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSW--TSMVRGYVQEGNVEEAE-------RLF 136
N ++S +V+ + +AR+VFD MP RN+V+ S V YV G+ ++ ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 137 WRMPEKNVVSWTVMLG-GLLKDSRVEDARKLFDMMPVKDVVAVT-------NMIGGYCEE 188
+ MP + S V L + + ++ AR++ ++ A T N+I Y
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP-------ERNEVSWT 241
G LE+AR +FD+MP RNVV++ + S Y+RN D A F + + N ++T
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNP--DFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 242 AM----------LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF 291
++ LMG + + S+ VV ++ + GD++ A+ +F
Sbjct: 204 SLVQVCAVLEDVLMGSSLN------SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 292 EKMRERDDGTWSAMIKVYERKGFELE-ALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+ + RD W+ MI V K ++E L F M G
Sbjct: 258 DCVNNRDAVAWNTMI-VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
G+ +HAR++ S+ DL + +AL+ MY CGD+ A ++F R ++V WNS+I+G
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 411 SQHGLGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
S++G GE+A+ ++R + P PD+ +F +SA + + G+ + K E
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK-LLHGQVTKLGYER 435
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
+ ++ + + + A ++ + M E D ++W ++ H +L +E+AV+
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVG---HSRLGNSELAVQ 489
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 161/357 (45%), Gaps = 24/357 (6%)
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKRNVVT---------WTTMVSG-YARNRRVDVAR 226
A N+I Y LE+AR +FD+MP+RN+VT + +M S +++ ++ +
Sbjct: 24 ANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQ 83
Query: 227 KLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFF----DAMPVKPVVACNEMIMG 277
+F MP NE++ T + T R R+ + A N +I
Sbjct: 84 MIF-FMP-LNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 278 FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK-GFELEALGLFARMQREGAALNFPX 336
+ G +++A+ VF+KM R+ +++A+ Y R F A L M E N
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 337 XXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP 396
G +++++++ + ++ V ++++ MY CGDL A+ IF+
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 397 LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGRE 456
+D V WN+MI G ++ E+ L FR+M +SGV P ++ VL+ CS G G+
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 457 IFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
I + + + ++D+ G + +A + ++ P+ + W S++ C
Sbjct: 322 IHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGC 376
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 157/364 (43%), Gaps = 58/364 (15%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y+ G +E+AR++FD +R +WN M+ + + + F
Sbjct: 238 TSVLGMYSSCGDLESARRIFDCVN--NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 82 I----VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVS----WTSMVRGYVQEGNVEEAE 133
+ +++ +++G K G + + + + V + ++ +++ Y G++ EA
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF 355
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDA----RKLFDM-MPVKDVVAVTNMIGGYCEE 188
+F R+ N+VSW ++ G ++ E A R+L M P D + I E
Sbjct: 356 YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEP 415
Query: 189 GRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAML 244
R + L ++ K R+V TT++S Y +NR + A+K+F+VM ER+ V WT M+
Sbjct: 416 ERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475
Query: 245 MGYTHSGRMREASEFF----------DAMPVKPVV-ACNEMIM--------------GF- 278
+G++ G A +FF D + V+ AC++M M GF
Sbjct: 476 VGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD 535
Query: 279 -------------GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
G +G + A+ +F D W++M+ Y + G +AL F ++
Sbjct: 536 CVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
Query: 326 QREG 329
G
Sbjct: 596 LENG 599
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 177/643 (27%), Positives = 310/643 (48%), Gaps = 62/643 (9%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET-TP 78
+S ++ Y++ G + AR VFDE + R SWNA++AAY + + +A LFE+
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEM--LERNVYSWNAVIAAYVKFNNVKEARELFESDNC 82
Query: 79 EKNIVSWNGMVSGFVK-NGMVAEARRVFDAMPVR-------NVVSWTSMVRGYVQEGNVE 130
E++++++N ++SGF K +G +EA +F M + + + T+MV+ + NV
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLL----KDSRVEDARKLFDMMPVK--DVVAVTNMIGG 184
E+L + + + L+ K + ++ +F+ V+ D VA MI
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 185 YCEEGRLEEARALFDEMPKRN-VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAM 243
YC EG +++A ++F P+ N ++W T+++GYA+N + A K+ V E N + W
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM-AVSMEENGLKWDEH 261
Query: 244 LMG----------------------------------------YTHSGRMREASEFFDAM 263
G Y G M+ A
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF- 322
+ + + MI+G+ G + AK +F+ + E++ W+AM Y L L
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
A + E + + G+++H +R+ D + +A + MY KC
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKC 441
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
G++ A+ IF+ +D VM+N+MI G + HG ++ F DM G PD+I+F+ +L
Sbjct: 442 GNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALL 501
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM-PMEP 501
SAC + G V EG + F+SM Y + P HY CM+DL G+A +++ A+E++E + +E
Sbjct: 502 SACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEK 561
Query: 502 DAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
DA++ G+ L AC + +L + EKL +E N Y+ +++ YAS GRW++++ +R
Sbjct: 562 DAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRH 621
Query: 562 KIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKML 604
+++ + + G SW ++K+ HMF D + H E I ML
Sbjct: 622 QMRGKELEIFSGCSWANIDKQFHMFTSSDIS-HYETEAIYAML 663
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 81/482 (16%)
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR-MPE 141
VS N +V+ + K+G++ EAR VFD M RNV SW +++ YV+ NV+EA LF E
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
++++++ +L G K E EA +F EM
Sbjct: 84 RDLITYNTLLSGFAKTDGCES------------------------------EAIEMFGEM 113
Query: 202 PKR-------NVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHS 250
++ + T TTMV A+ V +L V+ + + + ++++ Y+
Sbjct: 114 HRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKC 173
Query: 251 GRMREASEFFDAMPVKPV--VACNEMIMGFGFDGDVDRAKAVFEKMRERDDG-TWSAMIK 307
G+ +E F+ V+ V VA N MI + +GD+D+A +VF + E +D +W+ +I
Sbjct: 174 GKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIA 233
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ 367
Y + G+E EAL + M+ G + G++VHAR++++
Sbjct: 234 GYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYS 293
Query: 368 DLYVASALITMYVKCGD-------------------------------LVRAKWIFNRYP 396
+ +V+S ++ +Y KCG+ +V AK +F+
Sbjct: 294 NKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLS 353
Query: 397 LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV-PPDDISFIGVLSACSYSGKVKEGR 455
K++V+W +M GY + L + R + PD + + VL ACS ++ G+
Sbjct: 354 EKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGK 413
Query: 456 EIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACR 514
EI S++ ++ + VD+ + G V A I + E D +++ +++ C
Sbjct: 414 EIHGHSLRTGILMDKKL--VTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCA 470
Query: 515 TH 516
H
Sbjct: 471 HH 472
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 188/703 (26%), Positives = 331/703 (47%), Gaps = 91/703 (12%)
Query: 13 VQVRFQC-----TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP 67
+ VR C ++ + YA+ + + +VF P + + SW+A++A Q +
Sbjct: 205 IVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLL 262
Query: 68 HQAVTLFETTPEKNI-------------------------VSWNGMVSGFVKNGMV---- 98
A+ F+ + N + + + S F +G+V
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 99 ----------AEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWT 148
+A+ +FD N S+ +M+ GY QE + +A LF R+ +
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 149 VMLGGLLKDSRV----EDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFD 199
+ L G+ + + + +++ + +K DV I Y + L EA +FD
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGL-AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 200 EMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHS----G 251
EM +R+ V+W +++ + +N + LF M E +E ++ ++L T G
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYG 501
Query: 252 RMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD--GT-------- 301
+S M V C+ + M + G ++ A+ + + +R + GT
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDM-YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 302 ----------WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
W+++I Y K +A LF RM G +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
G+Q+HA++++ E D+Y+ S L+ MY KCGDL ++ +F + +D V WN+MI GY+
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
HG GEEA+ +F M L + P+ ++FI +L AC++ G + +G E F MK Y ++P +
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHM-KLDLAEVAVEKLA 530
HY+ MVD+LG++G+V A+E++ +MP E D ++W +LLG C H +++AE A L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGD 590
+L+P+++ Y LLS++YA G WE V +R ++ + K PG SW+E++ + H+F+ GD
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGD 860
Query: 591 NNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLH-DVEEEEK 632
HP ++ E L + + D SFV +VEEE++
Sbjct: 861 -KAHPRWE---EIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 220/465 (47%), Gaps = 28/465 (6%)
Query: 50 TTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMP 109
TT N ++ Y + A +F+ P +++VSWN M++G+ K+ + +A F+ MP
Sbjct: 82 TTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMP 141
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLK-DSRVEDARKLFD 168
VR+VVSW SM+ GY+Q G ++ +F M + + +LK S +ED
Sbjct: 142 VRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQ 201
Query: 169 MMPV-------KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR 221
+ + DVVA + ++ Y + R E+ +F +P++N V+W+ +++G +N
Sbjct: 202 IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 261
Query: 222 VDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG 277
+ +A K F+ M + N + + ++L +R + A +K A + ++
Sbjct: 262 LSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ-LHAHALKSDFAADGIVRT 320
Query: 278 FGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
D ++ A+ +F+ + +++AMI Y ++ +AL LF R+ G
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
+ G Q++ ++S D+ VA+A I MY KC L A +F
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
+ +D V WN++I + Q+G G E L +F M S + PD+ +F +L AC+ G +
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLG 499
Query: 453 EGREIFESMKCKYQVEPGIEHYA----CMVDLLGRAGQVNDAVEI 493
G EI S+ V+ G+ + ++D+ + G + +A +I
Sbjct: 500 YGMEIHSSI-----VKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 219/370 (59%), Gaps = 3/370 (0%)
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR--ERD 298
T ++ Y G + +A + FD M VK V N ++ G+G G++D A+++ E M R+
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+ +W+ +I Y + G EA+ +F RM E + + G ++ +
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
+ ++ + + +A+I MY K G++ +A +F ++VV W ++I G + HG G E
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAE 334
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
AL +F M +GV P+D++FI +LSACS+ G V G+ +F SM+ KY + P IEHY CM+
Sbjct: 335 ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMI 394
Query: 479 DLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAG 538
DLLGRAG++ +A E+++ MP + +A +WGSLL A H L+L E A+ +L +LEP N+G
Sbjct: 395 DLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSG 454
Query: 539 PYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQP 598
Y+LL+++Y++ GRW++ ++R +K V K+ G S IEVE + + F+ GD HP+
Sbjct: 455 NYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLT-HPQVE 513
Query: 599 IIMKMLERLD 608
I ++L+ +D
Sbjct: 514 RIHEILQEMD 523
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 159/384 (41%), Gaps = 59/384 (15%)
Query: 96 GMVAEARRVFDAMPVRNVVSWTSMVRGY--VQEGNVEEAE----RLFWRMPEK-NVVSWT 148
G + A VF P N +M+R + E N R W + K + ++
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 149 VMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKR 204
+L ++ S V R++ + V V VT +I Y G L +AR +FDEM +
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMP--ERNEVSWTAMLMGYTHSGRMREASEFFDA 262
+V W +++GY + +D AR L E+MP RNEVSWT ++ GY SGR EA E F
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 263 MPVKPV-----------VAC----------------------------NEMIMGFGFDGD 283
M ++ V AC N +I + G+
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
+ +A VFE + ER+ TW+ +I G EAL +F RM + G N
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 344 XXXXXXXDHGRQVHARLVRSEF--DQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DV 400
D G+++ + RS++ ++ +I + + G L A + P K +
Sbjct: 361 CSHVGWVDLGKRLFNSM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA 419
Query: 401 VMWNSMITGYSQHG---LGEEALN 421
+W S++ + H LGE AL+
Sbjct: 420 AIWGSLLAASNVHHDLELGERALS 443
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 25/315 (7%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP--E 79
TG I Y G + +ARK+FDE + + + WNA++A Y + + +A +L E P
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEM--LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERL 135
+N VSW ++SG+ K+G +EA VF M + NV V+ +++ G++E ER+
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 136 FWRMPEKNVVSWTVMLGGLL----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRL 191
+ + + + ++ K + A +F+ + ++VV T +I G G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 192 EEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPER-----NEVSWTA 242
EA A+F+ M K V VT+ ++S + VD+ ++LF M + N +
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVAC-NEMIMGFGFDGDV---DRAKAVFEKMRERD 298
M+ +G++REA E +MP K A ++ D+ +RA + K+ +
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 299 DGTWSAMIKVYERKG 313
G + + +Y G
Sbjct: 453 SGNYMLLANLYSNLG 467
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 24/294 (8%)
Query: 33 QIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGF 92
QI VF +H T ++ YF A +F+ K++ WN +++G+
Sbjct: 137 QIHGQVVVFGFDSSVHVVT----GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGY 192
Query: 93 VKNGMVAEARRVFDAMP--VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VS 146
K G + EAR + + MP VRN VSWT ++ GY + G EA +F RM +NV V+
Sbjct: 193 GKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVT 252
Query: 147 WTVMLGGLLKDSRVEDARKL---FDMMPVKDVVAVTN-MIGGYCEEGRLEEARALFDEMP 202
+L +E ++ D + V++ N +I Y + G + +A +F+ +
Sbjct: 253 LLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 203 KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASE 258
+RNVVTWTT+++G A + A +F M + N+V++ A+L +H G +
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 259 FFDAMPVKPVVACNE-----MIMGFGFDGDVDRAKAVFEKMRERDDGT-WSAMI 306
F++M K + N MI G G + A V + M + + W +++
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 43/201 (21%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM------ 406
GRQ+H ++V FD ++V + LI MY CG L A+ +F+ +KDV +WN++
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 407 ---------------------------ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFI 439
I+GY++ G EA+ VF+ M + V PD+++ +
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 440 GVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM----VDLLGRAGQVNDAVEIVE 495
VLSAC+ G ++ G I C Y G+ + +D+ ++G + A+++ E
Sbjct: 255 AVLSACADLGSLELGERI-----CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 496 KMPMEPDAIVWGSLLGACRTH 516
+ E + + W +++ TH
Sbjct: 310 CVN-ERNVVTWTTIIAGLATH 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 52/284 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN--- 81
++ Y ++G+++ AR + + P R SW +++ Y ++ + +A+ +F+ +N
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 82 -----------------------IVSW-------------NGMVSGFVKNGMVAEARRVF 105
I S+ N ++ + K+G + +A VF
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVE 161
+ + RNVV+WT+++ G G+ EA +F RM + V V++ +L V+
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 162 DARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMVSG 215
++LF+ M K ++ MI G+L EA + MP K N W ++++
Sbjct: 369 LGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Query: 216 YARNRRVDVA-RKLFEVMPERNEVSWTAMLMG--YTHSGRMREA 256
+ +++ R L E++ S ML+ Y++ GR E+
Sbjct: 429 SNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDES 472
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQAVTLFE 75
+ T +S A +G +E ++ H ++R S NA++ Y ++ +A+ +FE
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 76 TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM---PVR-NVVSWTSMVRGYVQEGNVEE 131
E+N+V+W +++G +G AEA +F+ M VR N V++ +++ G V+
Sbjct: 310 CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDL 369
Query: 132 AERLFWRMPEK-----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAV 178
+RLF M K N+ + M+ L + ++ +A ++ MP K A+
Sbjct: 370 GKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/655 (27%), Positives = 289/655 (44%), Gaps = 110/655 (16%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------ 74
+ IS Y + +A KVFDE R +W MV+ Y +P++A+ L+
Sbjct: 43 ANNVISMYVDFRLLSDAHKVFDEMSE--RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS 100
Query: 75 ------------------------------ETTPEKN----IVSWNGMVSGFVKNGMVAE 100
E ++N +V N +V +VKNG + E
Sbjct: 101 EEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIE 160
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV 160
A F + + SW +++ GY + G ++EA LF RMP+ NVVSW ++ G +
Sbjct: 161 ANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP 220
Query: 161 EDARKLFDM-----------MPV---------------------------KDVVAVTNMI 182
L M +P A++ +I
Sbjct: 221 RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALI 280
Query: 183 GGYCEEGRLEEARALFDE---MPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
Y G L A +F + +V W +M+SG+ N + A L + ++++
Sbjct: 281 DMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL-LQIYQSDLC 339
Query: 240 WTAMLMGYTHSGRMREASEFFD---AMPVKPVVACNEMIMGFGFD--------------G 282
+ + YT SG ++ + + + V +V ++ G+ D G
Sbjct: 340 FDS----YTLSGALKICINYVNLRLGLQVHSLV----VVSGYELDYIVGSILVDLHANVG 391
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
++ A +F ++ +D +S +I+ + GF A LF + + G +
Sbjct: 392 NIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILK 451
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
G+Q+H ++ ++ + A+AL+ MYVKCG++ +F+ +DVV
Sbjct: 452 VCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS 511
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
W +I G+ Q+G EEA F M G+ P+ ++F+G+LSAC +SG ++E R E+MK
Sbjct: 512 WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMK 571
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+Y +EP +EHY C+VDLLG+AG +A E++ KMP+EPD +W SLL AC TH L
Sbjct: 572 SEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLV 631
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
V EKL + P + Y LS+ YA+ G W+ + VRE K K G SWI
Sbjct: 632 TVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 224/509 (44%), Gaps = 79/509 (15%)
Query: 62 FQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVR 121
QAH Q ++ +N+ N ++S +V ++++A +VFD M RN+V+WT+MV
Sbjct: 27 IQAHVIKQGIS-------QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 122 GYVQEGNVEEAERLFWRMPEK-----NVVSWTVMLG--GLLKDSRV----------EDAR 164
GY +G +A L+ RM + N ++ +L GL+ D ++ E+ R
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
DVV + +++ Y + GRL EA + F E+ + + +W T++SGY + +D
Sbjct: 140 G--------DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 225 ARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV-----------ACN- 272
A LF MP+ N VSW ++ G+ G R A EF M + +V AC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 273 --EMIMG----------------FGFDGDVDR---------AKAVF--EKMRERDD-GTW 302
+ MG F +D A VF EK+ W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
++M+ + AL L ++ + + G QVH+ +V
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNV 422
S ++ D V S L+ ++ G++ A +F+R P KD++ ++ +I G + G A +
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 423 FRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE-SMKCKYQVEPGIEHYACMVDLL 481
FR++ G+ D +L CS + G++I +K Y+ EP +VD+
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMY 488
Query: 482 GRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ G++++ V + + M +E D + W ++
Sbjct: 489 VKCGEIDNGVVLFDGM-LERDVVSWTGII 516
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G + A +++ Q++++A+ +I+MYV L A +F+ +++V W +M++GY+
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 413 HGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGK--------------------- 450
G +A+ ++R M S ++ + VL AC G
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 451 ---------VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP 501
VK GR I + K + P + ++ +AG +++AV + +MP +P
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP-QP 202
Query: 502 DAIVWGSLL 510
+ + W L+
Sbjct: 203 NVVSWNCLI 211
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 284/546 (52%), Gaps = 30/546 (5%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
A+V+ Y + Q A+ + + PE+ I S N VSG ++NG +A R+F V
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD--SRVED---ARK 165
N V+ S++ G G++E +L + K+ V +G L SR + A +
Sbjct: 130 MNSVTVASVLGGC---GDIEGGMQLHC-LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 166 LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK-----RNVVTWTTMVSGYARNR 220
+F+ +P K VV I G E G + ++F+ M K N VT+ ++ A
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 221 RVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAMP-VKPVVACNEMI 275
+ R+L ++ ++ + TA++ Y+ + A F + + +++ N +I
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 276 MGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
G +G + A +FEK+ D TW+++I + + G +EA F RM
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI 391
+ +G+++H ++++ ++D++V ++LI MY+KCG A+ I
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 392 FNRY--PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSG 449
F+R+ KD V WN MI+GY +HG E A+ +F + V P +F VLSACS+ G
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCG 485
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
V++G +IF M+ +Y +P EH CM+DLLGR+G++ +A E++++M ++ SL
Sbjct: 486 NVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSL 544
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
LG+CR H+ L E A KLA+LEP+N P+V+LS +YA+ RWEDVE +R+ I + ++
Sbjct: 545 LGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLV 604
Query: 570 KLPGYS 575
KLPG S
Sbjct: 605 KLPGLS 610
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
GR +HA++V++ F D++ A+AL++MY+K + A + + P + + N+ ++G
Sbjct: 49 QGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLL 108
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMKCKYQVEPG 470
++G +A +F D +SG + ++ VL C G ++ G ++ +MK +++E
Sbjct: 109 ENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVY 165
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMP 498
+ +V + R G+ A + EK+P
Sbjct: 166 VG--TSLVSMYSRCGEWVLAARMFEKVP 191
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/646 (26%), Positives = 286/646 (44%), Gaps = 66/646 (10%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI----- 82
Y + ++ AR++FD P R S+N++++ Y Q QA+ LF E N+
Sbjct: 92 YCKCRELGFARQLFDRMPE--RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKF 149
Query: 83 ------------------------VSWNGM----------VSGFVKNGMVAEARRVFDAM 108
V NG+ + + K G + +A +FD
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 109 PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFD 168
R+ VSW S++ GYV+ G EE L +M + T LG +LK + +
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 169 M-MPVK----------DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
M + D+V T ++ Y + G L+EA LF MP +NVVT+ M+SG+
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 218 RNRRV-----DVARKLFEVMPERN---EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
+ + A KLF M R S ++++ + + E A+ K
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 270 ACNEMIMG-----FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
+E I + G + F ++D +W++MI + + A LF +
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
+ G Q+ ++S D V ++ I+MY K G+
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
+ A +F DV +++MI+ +QHG EALN+F M G+ P+ +F+GVL A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C + G V +G + F+ MK Y++ P +H+ C+VDLLGR G+++DA ++ + +
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK 564
W +LL +CR + + + E+L +LEP+ +G YVLL ++Y G E VRE ++
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 565 TRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGL 610
R V K P SWI + + H F D + HP +I MLE +D +
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVADLS-HPSSQMIYTMLETMDNV 734
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+ H +++S + LY+ + L+ MY KC +L A+ +F+R P ++++ +NS+I+GY+Q
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
G E+A+ +F + + + D ++ G L C + G E+ + + +
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVF 184
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
++D+ + G+++ A+ + ++ E D + W SL+ ++++ AE + LA++
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG---YVRVGAAEEPLNLLAKM 240
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 261/542 (48%), Gaps = 52/542 (9%)
Query: 30 RIGQIENARK--VFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
R+ Q EN +K V TP + + + QAH LF T S +
Sbjct: 22 RLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDT-----FSASK 76
Query: 88 MVSGFVKN---GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV 144
+V+ N V+ A + + + N + S++R Y E A +F M
Sbjct: 77 LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREM----- 131
Query: 145 VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR 204
+LG + D V +C EE R + K
Sbjct: 132 -----LLGPVFPDKY--------------SFTFVLKACAAFC---GFEEGRQIHGLFIKS 169
Query: 205 NVVT----WTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF 260
+VT T+V+ Y R+ ++ARK+ + MP R+ VSW ++L Y G + EA F
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 261 DAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALG 320
D M + V + N MI G+ G V AK VF+ M RD +W+AM+ Y G E L
Sbjct: 230 DEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 321 LFARM------QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASA 374
+F +M + +G L G VH + + + + ++A+A
Sbjct: 290 VFNKMLDDSTEKPDGFTL-----VSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATA 344
Query: 375 LITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
L+ MY KCG + +A +F +DV WNS+I+ S HGLG++AL +F +M G P+
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
I+FIGVLSAC++ G + + R++FE M Y+VEP IEHY CMVDLLGR G++ +A E+V
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 495 EKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
++P + +I+ SLLGAC+ +L+ AE +L +L +++ Y +S++YAS GRWE
Sbjct: 465 NEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
Query: 555 DV 556
V
Sbjct: 525 KV 526
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 25/265 (9%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVS 84
++ Y R G E ARKV D P R SWN++++AY + +A LF+ E+N+ S
Sbjct: 182 VNVYGRSGYFEIARKVLDRMPV--RDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVES 239
Query: 85 WNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK-- 142
WN M+SG+ G+V EA+ VFD+MPVR+VVSW +MV Y G E +F +M +
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 143 ---------NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-DVVAVTNMIGGYCEEGRLE 192
+V+S LG L S+ E D ++ + T ++ Y + G+++
Sbjct: 300 EKPDGFTLVSVLSACASLGSL---SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYT 248
+A +F KR+V TW +++S + + A ++F M + N +++ +L
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 249 HSGRMREASEFFDAMP----VKPVV 269
H G + +A + F+ M V+P +
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTI 441
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 24/269 (8%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGD---LVRAKWIFNRYPLKDVVMWNSMITGY 410
+Q HA ++++ D + AS L+ + + A I NR + NS+I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
+ E AL VFR+M L V PD SF VL AC+ +EGR+I + K +
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI-HGLFIKSGLVTD 174
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
+ +V++ GR+G A +++++MP+ DA+ W SLL A +++ L + A
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA---YLEKGLVDEARALFD 230
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGD 590
++E +N + + YA+ G ++ + V + + R V+ SW A+ VG
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV-----SW-NAMVTAYAHVG-- 282
Query: 591 NNCHPEQPIIMKMLERLDGLLRDAGYSPD 619
C+ E +LE + +L D+ PD
Sbjct: 283 --CYNE------VLEVFNKMLDDSTEKPD 303
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 289/586 (49%), Gaps = 33/586 (5%)
Query: 20 TSTGAISRYARIGQIENARKVFDET--------PHIHRTTSSWNAMVAAYFQAHQPHQAV 71
T I ++GQ+ A ++ + T P ++ + V ++ Q H V
Sbjct: 28 TKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV 87
Query: 72 TLFETTPEKNIVSWNGMVSGFVKNG-MVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVE 130
++N+ N ++S + K G + E RRVFD V++ +SWTSM+ GYV
Sbjct: 88 VKSGLETDRNV--GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHV 145
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLLKD-SRVEDAR--KLFDMMPVKDVVAVTNMIGG--- 184
+A +F M + + L +K S + + R + F + + + I
Sbjct: 146 KALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 185 --YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV---- 238
Y +AR +FDEMP+ +V+ WT ++S +++N + A LF M +
Sbjct: 206 YLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDG 265
Query: 239 -SWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEK 293
++ +L + R+++ E + VV + ++ +G G V A+ VF
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
M +++ +WSA++ Y + G +A+ +F M+ + + G
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLG 381
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+++H + VR ++ V SALI +Y K G + A ++++ +++++ WN+M++ +Q+
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G GEEA++ F DM G+ PD ISFI +L+AC ++G V EGR F M Y ++PG EH
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD-LAEVAVEKLAQL 532
Y+CM+DLLGRAG +A ++E+ DA +WG LLG C + +AE +++ +L
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMEL 561
Query: 533 EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
EPK YVLLS+MY + GR D +R+ + R V K G SWI+
Sbjct: 562 EPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 254/507 (50%), Gaps = 25/507 (4%)
Query: 98 VAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVML 151
++ AR VF+++ +V W SM+RGY N ++A + M P+ + +
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 152 GGLLKDSRVEDARKLFDMMPVKDV--VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
L+D + F + +V T ++ Y G + +F+++P+ NVV W
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERN-EVSWTAMLMGYTHSGRMREASE------FFDA 262
+++SG+ N R A + F M + + T M+ GR ++ F
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 263 MPVKP---------VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKG 313
+ P V+ +I + GD+ A+ +F+ M ER +W+++I Y + G
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 314 FELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVAS 373
EAL +F M G A + G+ +HA + ++ F +D +
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC 356
Query: 374 ALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VP 432
AL+ MY K GD AK F KD + W +I G + HG G EAL++F+ M G
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 433 PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVE 492
PD I+++GVL ACS+ G V+EG+ F M+ + +EP +EHY CMVD+L RAG+ +A
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 493 IVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGR 552
+V+ MP++P+ +WG+LL C H L+L + +A+ E +G YVLLS++YA GR
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGR 536
Query: 553 WEDVEVVREKIKTRSVIKLPGYSWIEV 579
W DV+++RE +K++ V K+ G+S +E
Sbjct: 537 WADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
F++ N++ ++ + K G + AR +FD MP R +VSW S++ GY Q G+ EEA
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP--------VKDVVAVTNMIGGY 185
+F M + + V +++ S ++ +L + VKD V ++ Y
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 186 CEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNE-----VSW 240
+ G E A+ F+++ K++ + WT ++ G A + + A +F+ M E+ +++
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 241 TAMLMGYTHSGRMREASEFFDAM 263
+L +H G + E +F M
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEM 445
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 149/368 (40%), Gaps = 77/368 (20%)
Query: 33 QIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN--------- 81
+ AR VF+ + P ++ WN+M+ Y + P +A+ ++ K
Sbjct: 56 NLSYARSVFESIDCPSVY----IWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFP 111
Query: 82 --IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+ + +G+ ++ G V V VS T ++ Y+ G V R+F +
Sbjct: 112 YVLKACSGLRD--IQFGSCVHGFVVKTGFEVNMYVS-TCLLHMYMCCGEVNYGLRVFEDI 168
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP--------------------VKDVVA-- 177
P+ NVV+W ++ G + ++R DA + F M KD+V
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 178 -------------------------VTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTM 212
T++I Y + G L AR LFD MP+R +V+W ++
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSI 288
Query: 213 VSGYARNRRVDVARKLF------EVMPERN---EVSWTAMLMGYTHSGRMREASEFFDAM 263
++GY++N + A +F + P++ V +M+ G + G+ A
Sbjct: 289 ITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF 348
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
+ C ++ + GD + AK FE + ++D W+ +I G EAL +F
Sbjct: 349 VKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQ 407
Query: 324 RMQREGAA 331
RMQ +G A
Sbjct: 408 RMQEKGNA 415
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 21/245 (8%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T I YA+ G + AR +FD P RT SWN+++ Y Q +A+ +F +
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMP--ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMP--------VRNVVSWTSMVRGYVQEGNVEEA 132
I ++ M+ ++ ++ V++ ++V Y + G+ E A
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCE 187
++ F + +K+ ++WTV++ GL +A +F M K D + ++
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 188 EGRLEEARALFDEMP-----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-WT 241
G +EE + F EM + V + MV +R R + A +L + MP + V+ W
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 242 AMLMG 246
A+L G
Sbjct: 492 ALLNG 496
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 30/285 (10%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVF----DAMPV 110
+++ Y + A LF+ PE+ +VSWN +++G+ +NG EA +F D
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 111 RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL----KDSRVEDARKL 166
+ V++ S++R + +G + + + + + V ++ L+ K E A+K
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRR 221
F+ + KD +A T +I G G EA ++F M ++ + +T+ ++ +
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434
Query: 222 VDVARKLFEVMPERNEVSWT-----AMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM 276
V+ ++ F M + + + T M+ + +GR EA MPVKP N I
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP----NVNIW 490
Query: 277 GFGFDG-DV-------DRAKAVFEKMRERDDGTWSAMIKVYERKG 313
G +G D+ DR +++ + E G + + +Y + G
Sbjct: 491 GALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAG 535
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCG---DLVRAKWIFNRYPLKDVVMWNSMITGY 410
Q+H +++S +++ S LI C +L A+ +F V +WNSMI GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
S ++AL +++M G PD +F VL ACS ++ G + K E
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV-HGFVVKTGFEVN 141
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+ C++ + G+VN + + E +P + + + WGSL+
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLISG 182
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 267/520 (51%), Gaps = 21/520 (4%)
Query: 107 AMPVRNVVSWTSMVRGY-VQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL-----KDSRV 160
AMP +S + +R Q + E +++ + + ++S TV +L S +
Sbjct: 15 AMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDM 74
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM--------PKRNVVTWTTM 212
A +F + K+ +I G+ E A ++F +M P+R +T+ ++
Sbjct: 75 NYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSV 132
Query: 213 VSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
Y R + R+L ++ E + ML Y G + EA F M V
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
VA N MIMGF G +D+A+ +F++M +R+ +W++MI + R G +AL +F MQ +
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 329 GAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA 388
+ + GR +H +VR+ F+ + V +ALI MY KCG +
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
+F P K + WNSMI G + +G E A+++F ++ SG+ PD +SFIGVL+AC++S
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
G+V E F MK KY +EP I+HY MV++LG AG + +A +++ MP+E D ++W S
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Query: 509 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
LL ACR +++A+ A + L +L+P YVLLS+ YAS G +E+ R +K R +
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Query: 569 IKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLD 608
K G S IEV+ + H F+ HP+ I +L+ L+
Sbjct: 493 EKEVGCSSIEVDFEVHEFISCGGT-HPKSAEIYSLLDILN 531
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 28/310 (9%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSW--NAMVAAYFQAHQPHQAVTLFETTPEKNIVSW 85
Y R+GQ + R++ S+ N M+ Y +A +F ++V+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N M+ GF K G++ +A+ +FD MP RN VSW SM+ G+V+ G ++A +F M EK+V
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 146 SWTVMLGGLLKDSRVEDA------------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEE 193
+ LL A R F++ + + VT +I YC+ G +EE
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL----NSIVVTALIDMYCKCGCIEE 311
Query: 194 ARALFDEMPKRNVVTWTTMVSGYARN----RRVDVARKLFEVMPERNEVSWTAMLMGYTH 249
+F+ PK+ + W +M+ G A N R +D+ +L E + VS+ +L H
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 250 SGRMREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWS 303
SG + A EFF M K ++ + M+ G G ++ A+A+ + M E D WS
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 304 AMIKVYERKG 313
+++ + G
Sbjct: 432 SLLSACRKIG 441
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 192/454 (42%), Gaps = 50/454 (11%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRT-------TSSWNAMVAAYFQAHQP---HQA 70
S+G++S + I+ E IH + + + A F P + A
Sbjct: 18 SSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYA 77
Query: 71 VTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM--------PVRNVVSWTSMVRG 122
+F KN WN ++ GF ++ A +F M P R +++ S+ +
Sbjct: 78 YLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFKA 135
Query: 123 YVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAV 178
Y + G + +L + E + ML + + +A ++F M DVVA
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER--- 235
+MI G+ + G +++A+ LFDEMP+RN V+W +M+SG+ RN R A +F M E+
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 236 -NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKA 289
+ + ++L + G E + V+ N +++ D G ++
Sbjct: 256 PDGFTMVSLLNACAYLGA-SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 290 VFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXX 349
VFE ++ W++MI GFE A+ LF+ ++R G +
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPD------SVSFIGVLTA 368
Query: 350 XDHGRQVHA-----RLVRSEF--DQDLYVASALITMYVKCGDLVRAKWIFNRYPL-KDVV 401
H +VH RL++ ++ + + + ++ + G L A+ + P+ +D V
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
+W+S+++ + G E A + CL + PD+
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAK--CLKKLDPDE 460
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 270/547 (49%), Gaps = 25/547 (4%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----- 142
++S + K GMV EA VF + + + W +MV Y + A LF M +K
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 143 -----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAV-TNMIGGYCEEGRLEEARA 196
NV+S +LG L + +LF P++ + + ++ Y + G +A
Sbjct: 373 SFTLSNVISCCSVLG--LYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSW--TAMLMGYTHSGRMR 254
+F M ++++V W +++SG +N + A K+F M + ++ + ++ T++
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 255 EASEF--------FDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
EA F V V + +I + G + A VF M + W++MI
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
Y R ++ LF M +G + G+ +H +R
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 609
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
D ++ +ALI MYVKCG A+ IF + K ++ WN MI GY HG AL++F +M
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
+G PDD++F+ ++SAC++SG V+EG+ IFE MK Y +EP +EHYA MVDLLGRAG
Sbjct: 670 KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGL 729
Query: 487 VNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHM 546
+ +A ++ MP+E D+ +W LL A RTH ++L ++ EKL ++EP+ YV L ++
Sbjct: 730 LEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINL 789
Query: 547 YASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLER 606
Y G + + +K + + K PG SWIEV + ++F G ++ P + I +L R
Sbjct: 790 YMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSS-SPMKAEIFNVLNR 848
Query: 607 LDGLLRD 613
L + D
Sbjct: 849 LKSNMVD 855
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/577 (22%), Positives = 232/577 (40%), Gaps = 87/577 (15%)
Query: 21 STGAISRYARIGQIENARKVFD-----ETPHIHRTTSSWNAMVAAYFQAHQPHQAV---- 71
+T ++ Y + G ++ A +VFD ++ R + WN+M+ YF+ + + V
Sbjct: 98 ATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 72 --TLFETTPEKNIVSW-----------------------------------NGMVSGFVK 94
+F P+ +S ++ + K
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217
Query: 95 NGMVAEARRVFDAMPVR-NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTV 149
G+ +A RVF + + NVV W M+ G+ G E + L+ +V S+T
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 150 MLGGLLKDSRVEDARKL----FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN 205
LG + R++ M D T+++ Y + G + EA +F + +
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 206 VVTWTTMVSGYARNRRVDVARKLFEVMPER----------NEVSWTAMLMGYTHSGRMRE 255
+ W MV+ YA N A LF M ++ N +S ++L Y + G+
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY-GKSVH 396
Query: 256 ASEFFDAMPVKPVVACNEMIMGF----GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYER 311
A F P++ ++ G D D A VF+ M E+D W ++I +
Sbjct: 397 AELF--KRPIQSTSTIESALLTLYSKCGCDPD---AYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 312 KGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD---HGRQVHARLVRSEFDQD 368
G EAL +F M+ + +L P + G QVH ++++ +
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLK-PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 369 LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
++V S+LI +Y KCG A +F +++V WNSMI+ YS++ L E ++++F M
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 429 SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVN 488
G+ PD +S VL A S + + +G+ + + + ++D+ + G
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 489 DAVEIVEKMPMEPDAIVWGSLL------GACRTHMKL 519
A I +KM I W ++ G C T + L
Sbjct: 630 YAENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSL 665
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 207/470 (44%), Gaps = 37/470 (7%)
Query: 88 MVSGFVKNGMVAEARRVFDA-------MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM- 139
+V+ +VK G + A +VFD + R+V W SM+ GY + +E F RM
Sbjct: 101 LVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 140 ---PEKNVVSWTVMLGGLLKDS--RVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGR 190
+ S ++++ + K+ R E+ +++ M D T +I Y + G
Sbjct: 161 VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGL 220
Query: 191 LEEARALFDEM-PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV-----SWTAML 244
+A +F E+ K NVV W M+ G+ + + + L+ ++ + N V S+T L
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGAL 279
Query: 245 MGYTHS-----GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDD 299
+ S GR + P V C ++ + G V A+ VF + ++
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYV-CTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 300 GTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
W+AM+ Y + AL LF M+++ + ++G+ VHA
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEA 419
L + + SAL+T+Y KCG A +F KD+V W S+I+G ++G +EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 420 LNVFRDMC--LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
L VF DM + PD V +AC+ ++ G ++ SM K + + + +
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSL 517
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
+DL + G A+++ M E + + W S++ + + +L E++++
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISC---YSRNNLPELSID 563
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 23/362 (6%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDE-------MPKRNVVTWTTMVSGYARNRR----V 222
D T+++ Y + G L+ A +FD + R+V W +M+ GY + RR V
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 223 DVARKL--FEVMPERNEVSWTAMLMGYTHSGRMREASEFF-----DAMPVKPVVACNEMI 275
R++ F V P+ +S +M + R E + +++ + +
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 276 MGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP 335
M F F +D + E + + W+ MI + G +L L+ + L
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY 395
GRQ+H +V+ D YV ++L++MY KCG + A+ +F+
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 396 PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
K + +WN+M+ Y+++ G AL++F M V PD + V+S CS G G+
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 456 EIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL-GAC 513
+ E K Q IE + ++ L + G DA + + M E D + WGSL+ G C
Sbjct: 394 SVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLC 450
Query: 514 RT 515
+
Sbjct: 451 KN 452
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 306 IKVYERKGFELEALGLFARMQREG----AALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
I+ +KG L+AL L+++ + FP +G+ +H +V
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNL---SYGKTIHGSVV 87
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY-------PLKDVVMWNSMITGYSQHG 414
+ D ++A++L+ MYVKCG L A +F+ + +DV +WNSMI GY +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK--EGREIFESMKCKYQVEPGIE 472
+E + FR M + GV PD S V+S G + EG++I M + ++
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFM-LRNSLDTDSF 206
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL------GACRTHMKL 519
++D+ + G DA + ++ + + ++W ++ G C + + L
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 30/311 (9%)
Query: 25 ISRYARIGQIENARKVFDE--------TPHIHRTTSSWNAMVA--AYFQAHQPHQAVTLF 74
IS + G+ + A KVF + P TS NA A Q H ++
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHG--SMI 503
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAER 134
+T N+ + ++ + K G+ A +VF +M N+V+W SM+ Y + E +
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 135 LFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKL----FDMMPVKDVVAVTNMIGGYC 186
LF M + + VS T +L + + + + L + D +I Y
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV 623
Query: 187 EEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNE----VSWTA 242
+ G + A +F +M ++++TW M+ GY + A LF+ M + E V++ +
Sbjct: 624 KCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLS 683
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRAKAVFEKMR-E 296
++ HSG + E F+ M + N M+ G G ++ A + + M E
Sbjct: 684 LISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIE 743
Query: 297 RDDGTWSAMIK 307
D W ++
Sbjct: 744 ADSSIWLCLLS 754
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 114/298 (38%), Gaps = 56/298 (18%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
+ I Y++ G E A KVF T +WN+M++ Y + + P ++ LF +
Sbjct: 515 SSLIDLYSKCGLPEMALKVF--TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 82 IVS---------------------------------------WNGMVSGFVKNGMVAEAR 102
I N ++ +VK G A
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDS 158
+F M +++++W M+ GY G+ A LF M + + V++ ++
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Query: 159 RVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTM 212
VE+ + +F+ M ++ NM+ G LEEA + MP + + W +
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752
Query: 213 VSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
+S + V++ A KL + PER ++ ++ Y +G EA++ M K
Sbjct: 753 LSASRTHHNVELGILSAEKLLRMEPERGS-TYVQLINLYMEAGLKNEAAKLLGLMKEK 809
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 199/333 (59%), Gaps = 2/333 (0%)
Query: 247 YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
YT GRM +A + FD M + VV N MI GF GDV+R +F++M ER +W++MI
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
+ G + EAL LF M +G + D G+ +H+ S
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 367 QD-LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
+D + V +AL+ Y K GDL A IF + ++VV WN++I+G + +G GE +++F
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 426 MCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M G V P++ +F+GVL+ CSY+G+V+ G E+F M ++++E EHY MVDL+ R+
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLS 544
G++ +A + ++ MP+ +A +WGSLL ACR+H + LAEVA +L ++EP N+G YVLLS
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLS 446
Query: 545 HMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
++YA +GRW+DVE VR +K + K G S I
Sbjct: 447 NLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 45/222 (20%)
Query: 87 GMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS 146
G+V + G + +A++VFD M RNVV W M+RG+ G+VE LF +M E+++VS
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 147 WTVMLGGLLKDSRVEDARKLF----------------DMMPV------------------ 172
W M+ L K R +A +LF ++P+
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 173 -----KDVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
KD + V N ++ YC+ G LE A A+F +M +RNVV+W T++SG A N + +
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 227 KLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
LF+ M E NE ++ +L +++G++ E F M
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 145/367 (39%), Gaps = 55/367 (14%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKD-SR 159
A RVF + NV+ + +M++ Y G E+ F M + + + LLK S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 160 VEDARKLFDMMPVKDVVAV---------TNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
+ D R F +++ ++ Y GR+ +A+ +FDEM +RNVV W
Sbjct: 115 LSDLR--FGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM------- 263
M+ G+ + V+ LF+ M ER+ VSW +M+ + GR REA E F M
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 264 ------PVKPVVAC---------------------------NEMIMGFGFDGDVDRAKAV 290
V P+ A N ++ + GD++ A A+
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 291 FEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG-AALNFPXXXXXXXXXXXXXX 349
F KM+ R+ +W+ +I G + LF M EG A N
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 350 XDHGRQVHARLV-RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMI 407
+ G ++ ++ R + + A++ + + G + A P+ + MW S++
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 408 TGYSQHG 414
+ HG
Sbjct: 413 SACRSHG 419
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 117/290 (40%), Gaps = 37/290 (12%)
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
+ D A VF ++ + ++AMIK Y G LE+L F+ M+ G +
Sbjct: 51 NSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLK 110
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
G+ VH L+R+ F + + ++ +Y G + A+ +F+ ++VV+
Sbjct: 111 SCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVV 170
Query: 403 WNSMITGY-------------------------------SQHGLGEEALNVFRDMCLSGV 431
WN MI G+ S+ G EAL +F +M G
Sbjct: 171 WNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGF 230
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV 491
PD+ + + VL + G + G+ I + + + I +VD ++G + A
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAAT 290
Query: 492 EIVEKMPMEPDAIVWGSLLGACRTHMK----LDLAEVAVEKLAQLEPKNA 537
I KM + + W +L+ + K +DL + +E+ ++ P A
Sbjct: 291 AIFRKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEE-GKVAPNEA 338
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 245/467 (52%), Gaps = 12/467 (2%)
Query: 159 RVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV-----TWTTMV 213
++E K+FD MP +DVV+ +I Y GR E+A +F M + + + T + +
Sbjct: 96 KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 214 SGYARNRRVDVARKLFEVMPERNEVS---WTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
S + + +++ +++ + E+S A++ + G + +A FD+M K V
Sbjct: 156 SACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKC 215
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
M+ G+ G +D A+ +FE+ +D W+AM+ Y + EAL LF MQ G
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ + G+ +H + + D V +AL+ MY KCG + A
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALE 335
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
+F +D W S+I G + +G+ AL+++ +M GV D I+F+ VL+AC++ G
Sbjct: 336 VFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGF 395
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI---VWG 507
V EGR+IF SM ++ V+P EH +C++DLL RAG +++A E+++KM E D V+
Sbjct: 396 VAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYC 455
Query: 508 SLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
SLL A R + + +AE EKL ++E ++ + LL+ +YAS RWEDV VR K+K
Sbjct: 456 SLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLG 515
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDN-NCHPEQPIIMKMLERLDGLLRD 613
+ K PG S IE++ H F+ GD+ HP+ I ML + L+ D
Sbjct: 516 IRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLD 562
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 164/371 (44%), Gaps = 72/371 (19%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP-- 78
S + YA +G+IE KVFDE P R SWN ++++Y + A+ +F+
Sbjct: 84 SNSLMGMYASLGKIEITHKVFDEMPQ--RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQE 141
Query: 79 ------EKNIVSW-------------------------------NGMVSGFVKNGMVAEA 101
E IVS N +V F K G + +A
Sbjct: 142 SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKA 201
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
R VFD+M +NV WTSMV GYV G ++EA LF R P K+VV WT M+ G ++ +R +
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMV 213
+A +LF M D + +++ G + G LE+ + + + + V V T +V
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF----------DAM 263
YA+ ++ A ++F + ER+ SWT+++ G +G A + + DA+
Sbjct: 322 DMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAI 381
Query: 264 P-VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT-----WSAMIKVYERKGFELE 317
V + ACN G V + +F M ER + S +I + R G E
Sbjct: 382 TFVAVLTACNH-------GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Query: 318 ALGLFARMQRE 328
A L +M+ E
Sbjct: 435 AEELIDKMRGE 445
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 48/357 (13%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N ++ + G + +VFD MP R+VVSW ++ YV G E+A +F RM +++ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 146 SW-------TVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTN-MIGGYCEEGRLEEARAL 197
+ T+ LK+ + + F + + V + N ++ +C+ G L++ARA+
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
FD M +NV WT+MV GY R+D AR LFE P ++ V WTAM+ GY R EA
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 258 EFFDAMP---VKP--------VVACNE----------------------------MIMGF 278
E F M ++P + C + ++ +
Sbjct: 265 ELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
Query: 279 GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
G ++ A VF +++ERD +W+++I G AL L+ M+ G L+
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 339 XXXXXXXXXXXXDHGRQV-HARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
GR++ H+ R S LI + + G L A+ + ++
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDK 441
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G +VH V++ + D YV+++L+ MY G + +F+ P +DVV WN +I+ Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 413 HGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+G E+A+ VF+ M S + D+ + + LSACS ++ G I+ + ++++ I
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
+ +VD+ + G ++ A + + M + + W S++ + ++D A V E+
Sbjct: 185 GN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFER 238
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 296/633 (46%), Gaps = 83/633 (13%)
Query: 11 CMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQA 70
C + F CT+ + YA+ G + A +VF P+ + SW M++ Y +++ A
Sbjct: 280 CGAEDVFVCTAI--VDLYAKCGHMAEAMEVFSRIPN--PSVVSWTVMLSGYTKSNDAFSA 335
Query: 71 VTLFE----TTPEKNIVSWNGMVSGFVKNGMVAEARRV----FDAMPVRNVVSWTSMVRG 122
+ +F+ + E N + ++S + MV EA +V F + + +++
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISM 395
Query: 123 YVQEGNVEEAERLFWRMPE---KNVVSWTVMLGGLLKDSRVEDARKLF------------ 167
Y + G+++ +E++F + + +N+V+ VM+ + + A +LF
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 168 ----DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVD 223
++ V D + + + GY L+ L ++ +++ + Y++ ++
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGY----TLKSGLVL-------DLTVGSSLFTLYSKCGSLE 502
Query: 224 VARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM-------------------P 264
+ KLF+ +P ++ W +M+ G+ G +REA F M
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Query: 265 VKPVVACNEMIMGFGFDGDVDR--------------------AKAVFEKMRERDDGTWSA 304
P + + I G+ +D+ A+ V++++ E D + S+
Sbjct: 563 SHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSS 622
Query: 305 MIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE 364
+I Y + G + LF M G ++ G QVHA + +
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFR 424
+ V S+L+TMY K G + F++ D++ W ++I Y+QHG EAL V+
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 425 DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M G PD ++F+GVLSACS+ G V+E SM Y +EP HY CMVD LGR+
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 485 GQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLS 544
G++ +A + M ++PDA+VWG+LL AC+ H +++L +VA +K +LEP +AG Y+ LS
Sbjct: 803 GRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLS 862
Query: 545 HMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
++ A G W++VE R+ +K V K PG+S +
Sbjct: 863 NILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 238/550 (43%), Gaps = 68/550 (12%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP----EK 80
+S Y+ G + +A K+FD P S N M++ Y Q +++ F E
Sbjct: 91 LSWYSNSGSMADAAKLFDTIPQ--PDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 81 NIVSWNGMVSG-----------------------------------FVKNGMVAEARRVF 105
N +S+ ++S F KN +A +VF
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF 208
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGL-----LK 156
NV W +++ G ++ N LF M + + +++ +L L+
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 157 DSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGY 216
+V AR + +DV T ++ Y + G + EA +F +P +VV+WT M+SGY
Sbjct: 269 FGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 217 ARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASE-----FFDAMPVKP 267
++ A ++F+ M E N + T+++ + EAS+ F +
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS 386
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRE-RDDGTWSAMIKVYERKGFELEALGLFARMQ 326
VA +I + GD+D ++ VFE + + + + MI + + +A+ LF RM
Sbjct: 387 SVAA-ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML 445
Query: 327 REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
+EG + + G+QVH ++S DL V S+L T+Y KCG L
Sbjct: 446 QEGLRTD---EFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
+ +F P KD W SMI+G++++G EA+ +F +M G PD+ + VL+ CS
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Query: 447 YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW 506
+ G+EI + ++ G++ + +V++ + G + A ++ +++P E D +
Sbjct: 563 SHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSC 620
Query: 507 GSLLGACRTH 516
SL+ H
Sbjct: 621 SSLISGYSQH 630
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 204/481 (42%), Gaps = 45/481 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N QAH + + F+ K+++SW + +G +A+A ++FD +P +VV
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVV 116
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMM 170
S M+ GY Q EE+ R F +M E N +S+ G ++ A +++
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY----GSVISACSALQAPLFSELV 172
Query: 171 PVKDV--------VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
+ V + +I + + R E+A +F + NV W T+++G RN+
Sbjct: 173 CCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 223 DVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEM 274
LF M + + +++++L ++R + A +K V C +
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCGAEDVFVCTAI 291
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
+ + G + A VF ++ +W+ M+ Y + AL +F M+ G +N
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
QVHA + +S F D VA+ALI+MY K GD+ ++ +F
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE- 410
Query: 395 YPLKDVV---MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA--CSYSG 449
L D+ + N MIT +SQ +A+ +F M G+ D+ S +LS C G
Sbjct: 411 -DLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
K G + + V + + L + G + ++ ++ + +P + +A W S+
Sbjct: 470 KQVHGYTLKSGLVLDLTVG------SSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASM 522
Query: 510 L 510
+
Sbjct: 523 I 523
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 47/250 (18%)
Query: 368 DLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMC 427
D+++ +L++ Y G + A +F+ P DVV N MI+GY QH L EE+L F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 428 LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY----ACMVDLLGR 483
G ++IS+ V+SACS +F + C + ++ G Y + ++D+ +
Sbjct: 143 FLGFEANEISYGSVISACS-----ALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 484 AGQVNDAVEIVEKMP----------------------------------MEPDAIVWGSL 509
+ DA ++ +PD+ + S+
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L AC + KL +V ++ + ++ + +YA G + V +I SV+
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317
Query: 570 K----LPGYS 575
L GY+
Sbjct: 318 SWTVMLSGYT 327
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/470 (31%), Positives = 245/470 (52%), Gaps = 14/470 (2%)
Query: 150 MLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM------PK 203
+L LL + ARKLFD +I Y + E+ L++ + P
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 204 R---NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF 260
N + + AR R+ + + F E + T ++ Y G + A F
Sbjct: 82 HHTFNFIFAASASFSSARPLRL-LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVF 140
Query: 261 DAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALG 320
D M + V N MI G+ GD+ A +F+ M ++ +W+ +I + + G EAL
Sbjct: 141 DEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALK 200
Query: 321 LFARMQREGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
+F M+++ + N + GR++ + F ++YV +A I MY
Sbjct: 201 MFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY 260
Query: 380 VKCGDLVRAKWIFNRY-PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISF 438
KCG + AK +F +++ WNSMI + HG +EAL +F M G PD ++F
Sbjct: 261 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 439 IGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP 498
+G+L AC + G V +G+E+F+SM+ +++ P +EHY CM+DLLGR G++ +A ++++ MP
Sbjct: 321 VGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 380
Query: 499 MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEV 558
M+PDA+VWG+LLGAC H +++AE+A E L +LEP N G V++S++YA+ +W+ V
Sbjct: 381 MKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLR 440
Query: 559 VREKIKTRSVIKLPGYSW-IEVEKKAHMFVGGDNNCHPEQPIIMKMLERL 607
+R+ +K ++ K GYS+ +EV H F D + HP I ++LE +
Sbjct: 441 MRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS-HPRSYEIYQVLEEI 489
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 188/429 (43%), Gaps = 63/429 (14%)
Query: 14 QVRFQCTSTGA------ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQP 67
Q+ C TG + R I + ARK+FD H + T +N ++ AY+ HQP
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQP 63
Query: 68 HQAVTLFETTPEKNIVSWNGM-VSGFVKNGMVAEARRVFDAMPVRNVVS----------- 115
H+++ L+ N++S++G+ S N + A + A P+R + S
Sbjct: 64 HESIVLY------NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 116 --WTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK 173
T+++ Y + G + A R+F M +++V W M+ G + ++ A +LFD MP K
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 174 DVVAVTNMIGGYCEEGRLEEARALF-----DEMPKRNVVTWTTMVSGYARNRRVDVARKL 228
+V + T +I G+ + G EA +F D+ K N +T +++ A +++ R+L
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 229 FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAK 288
G RE + FFD + V CN I + G +D AK
Sbjct: 238 ---------------------EGYARE-NGFFDNIYV-----CNATIEMYSKCGMIDVAK 270
Query: 289 AVFEKM-RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
+FE++ +R+ +W++MI G EAL LFA+M REG +
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 348 XXXDHGRQVHARLVR-SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNS 405
G+++ + + L +I + + G L A + P+K D V+W +
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 406 MITGYSQHG 414
++ S HG
Sbjct: 391 LLGACSFHG 399
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 167/618 (27%), Positives = 294/618 (47%), Gaps = 67/618 (10%)
Query: 20 TSTGA--ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQ----------- 66
T+ GA + Y++ G +++A VFDE P R +W A+++ + Q +
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 67 -----------PHQAVTLFETTPEKNIVSWNGMVSGF-VKNGMVA--------------- 99
P F+ + + GF VKNG+ +
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 100 ----EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL 155
EA F + ++ SWTS++ + G++EE+ +FW M K + V++ L+
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 156 KD---SRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR-NV 206
+ + K F ++ D +++ YC+ L A LF + + N
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 207 VTWTTMVSGYARNRR----VDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDA 262
W TM+ GY + + +++ RK+ + E + S T+++ +H G +
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL-HC 457
Query: 263 MPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELE 317
VK + N +I +G GD+ A +F + + + TW+AMI Y +
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEK 516
Query: 318 ALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
A+ LF RM E + + G+ +H + +E + +L +++ALI
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 378 MYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
MY KCG L +++ +F+ KD V WN MI+GY HG E A+ +F M S V P +
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
F+ +LSAC+++G V++G+++F M +Y V+P ++HY+C+VDLL R+G + +A V M
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Query: 498 PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVE 557
P PD ++WG+LL +C TH + ++ E+ +P+N G Y++L++MY++ G+WE+ E
Sbjct: 696 PFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAE 755
Query: 558 VVREKIKTRSVIKLPGYS 575
RE ++ V K G+S
Sbjct: 756 RAREMMRESGVGKRAGHS 773
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
+ +++I + G + + VF + RD W+++IK + G +L F M
Sbjct: 59 IFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLL 118
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR-SEFDQDLYVASALITMYVKCGDLV 386
G + + G VH +++ FD++ V ++ + Y KCG L
Sbjct: 119 SGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ 178
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV---PPDDISFIGVLS 443
A +F+ P +DVV W ++I+G+ Q+G E L M +G P+ +
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 444 ACSYSGKVKEGR 455
ACS G +KEGR
Sbjct: 239 ACSNLGALKEGR 250
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
R+ +A ++ ++++VAS LI+ Y G + +F+ +D+ +WNS+I + +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G +L F M LSG PD + V+SAC+ G + + +
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
A V + G + DA + ++MP + D + W +++
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAII 199
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 10 VCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQ 69
+ +V + C +TG++ R GQ+ + ET H + S A++ Y + +
Sbjct: 534 ITLVTLLMACVNTGSLER----GQM--IHRYITETEHEMNLSLS-AALIDMYAKCGHLEK 586
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----SWTSMVRGYVQ 125
+ LF+ +K+ V WN M+SG+ +G V A +FD M +V ++ +++
Sbjct: 587 SRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTH 646
Query: 126 EGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMP 171
G VE+ ++LF +M + N+ ++ ++ L + +E+A MP
Sbjct: 647 AGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 199/331 (60%), Gaps = 3/331 (0%)
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
+ V + +++ + G+V+ A VFE+M ER+ +W+AMI + ++ L L+++
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
M++ + N GR VH + + L+++++LI+MY KCGD
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMC-LSGVPPDDISFIGVLS 443
L A IF+++ KDVV WNSMI GY+QHGL +A+ +F M SG PD I+++GVLS
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
+C ++G VKEGR+ F M ++ ++P + HY+C+VDLLGR G + +A+E++E MPM+P++
Sbjct: 332 SCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKI 563
++WGSLL +CR H + A E+ LEP A +V L+++YAS G W++ VR+ +
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLM 450
Query: 564 KTRSVIKLPGYSWIEVEKKAHMFVGGD-NNC 593
K + + PG SWIE+ MF D +NC
Sbjct: 451 KDKGLKTNPGCSWIEINNYVFMFKAEDGSNC 481
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 111/200 (55%), Gaps = 20/200 (10%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PE 141
+ +V + +G V A +VF+ MP RNVVSWT+M+ G+ QE V+ +L+ +M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 142 KNVVSWTVML-----GGLLKDSRVEDARKLFDMMPVKDVVAVTN-MIGGYCEEGRLEEAR 195
N ++T +L G L R + L M +K + ++N +I YC+ G L++A
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 196 ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER-----NEVSWTAMLMGYTHS 250
+FD+ ++VV+W +M++GYA++ A +LFE+M + + +++ +L H+
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 251 GRMREASEFFDAMP---VKP 267
G ++E +FF+ M +KP
Sbjct: 337 GLVKEGRKFFNLMAEHGLKP 356
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 15/322 (4%)
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDAR 164
FD +N VS S++ + E + +R W + S V GL +D R
Sbjct: 86 FDLSRTKNGVS--SVLEEVMLEDSSSSVKRDGWSFDAYGLSS-AVRSCGLNRDFRTGSGF 142
Query: 165 KLFDMMP--VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
+ + DV ++++ Y + G +E A +F+EMP+RNVV+WT M+SG+A+ RV
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 223 DVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDA---MPVKPVV-ACNEM 274
D+ KL+ M + N+ ++TA+L T SG + + M +K + N +
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-REGAALN 333
I + GD+ A +F++ +D +W++MI Y + G ++A+ LF M + G +
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN 393
GR+ + +L S L+ + + G L A +
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 394 RYPLK-DVVMWNSMITGYSQHG 414
P+K + V+W S++ HG
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHG 404
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
+++V Y + + A +FE PE+N+VSW M+SGF + V +++ M
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLL----KDSRVEDARKL 166
N ++T+++ G + + + + + S+ + L+ K ++DA ++
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM-----PKRNVVTWTTMVSGYARNRR 221
FD KDVV+ +MI GY + G +A LF+ M K + +T+ ++S
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 222 VDVARKLFEVM------PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP-VVACNEM 274
V RK F +M PE N S L+G G ++EA E + MP+KP V +
Sbjct: 339 VKEGRKFFNLMAEHGLKPELNHYSCLVDLLG--RFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 275 IMGFGFDGDV-DRAKAVFEKMRERDD--GTWSAMIKVYERKGFELEALGLFARMQREGAA 331
+ GDV +A E++ D T + +Y G+ EA + M+ +G
Sbjct: 397 LFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
Query: 332 LN 333
N
Sbjct: 457 TN 458
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 39/265 (14%)
Query: 281 DGDVDRAK----AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPX 336
D D+ R K +V E++ D S+ +K R G+ +A GL + ++ G +F
Sbjct: 85 DFDLSRTKNGVSSVLEEVMLEDS---SSSVK---RDGWSFDAYGLSSAVRSCGLNRDFRT 138
Query: 337 XXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP 396
G H ++ F D+Y+ S+L+ +Y G++ A +F P
Sbjct: 139 ----------------GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 397 LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGRE 456
++VV W +MI+G++Q + L ++ M S P+D +F +LSAC+ SG + +GR
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGR- 241
Query: 457 IFESMKCKYQVEPGIEHYA----CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
S+ C+ + G++ Y ++ + + G + DA I ++ D + W S++
Sbjct: 242 ---SVHCQ-TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAG 296
Query: 513 CRTHMKLDLAEVAVEKLAQLEPKNA 537
H LA A+E + PK+
Sbjct: 297 YAQH---GLAMQAIELFELMMPKSG 318
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T T +S G + R V +T H + N++++ Y + A +F+
Sbjct: 223 TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF 282
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFW 137
K++VSWN M++G+ ++G+ +A +F+ M
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELM----------------------------- 313
Query: 138 RMPEKNVVSWTVMLGGLLKDSR----VEDARKLFDMMP-------VKDVVAVTNMIGGYC 186
MP+ + G+L R V++ RK F++M + + +++G +
Sbjct: 314 -MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF- 371
Query: 187 EEGRLEEARALFDEMP-KRNVVTWTTMV 213
G L+EA L + MP K N V W +++
Sbjct: 372 --GLLQEALELIENMPMKPNSVIWGSLL 397
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 166/596 (27%), Positives = 285/596 (47%), Gaps = 50/596 (8%)
Query: 58 VAAYFQAHQPH-QAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV--- 113
+ ++ A H +A ++ E + + + WN +++ + KN + E + M + +
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPD 143
Query: 114 -VSWTSMVR----------GYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
++ S+++ G V G++E + + ++ ++ + +
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSY------KSSLYVCNALISMYKRFRNMGI 197
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSGYAR 218
AR+LFD M +D V+ +I Y EG EA LFD+M + +V+TW + G +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 219 NRRVDVARKLFEVMPERN---EVSWTAMLMGYTHS---GRMREASEF--------FDAMP 264
A L M RN + AM++G G +R E +D +
Sbjct: 258 TGNYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGID 315
Query: 265 -VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
V+ N +I + D+ A VF + E TW+++I Y + EA L
Sbjct: 316 NVR-----NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLR 370
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA-SALITMYVKC 382
M G N HG++ H ++R + +D + ++L+ +Y K
Sbjct: 371 EMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
G +V AK + + +D V + S+I GY G G AL +F++M SG+ PD ++ + VL
Sbjct: 431 GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
SACS+S V EG +F M+C+Y + P ++H++CMVDL GRAG + A +I+ MP +P
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 503 AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREK 562
W +LL AC H + + A EKL +++P+N G YVL+++MYA+ G W + VR
Sbjct: 551 GATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTI 610
Query: 563 IKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRD-AGYS 617
++ V K PG +WI+ + +F GD + PE +L+ L+ L++D AGY+
Sbjct: 611 MRDLGVKKDPGCAWIDTDSGFSLFSVGDTS-SPEACNTYPLLDGLNQLMKDNAGYA 665
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 162/384 (42%), Gaps = 25/384 (6%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
NA+++ Y + A LF+ E++ VSWN +++ + GM +EA +FD M
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPE-KNVVSWTVMLGGLLKDSRVEDAR---KL 166
+V++W + G +Q GN A L RM + M+ GL S + R ++
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 167 FDMMPVKDVVAVTN----MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRV 222
+ + N +I Y + L A +F + + ++ TW +++SGYA+ +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 223 DVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP-----VVACNE 273
+ A L M + N ++ ++L ++ EF + + + N
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 274 MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
++ + G + AK V + M +RD+ T++++I Y +G AL LF M R G +
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD--QDLYVASALITMYVKCGDLVRAKWI 391
G ++ ++ + E+ L S ++ +Y + G L +AK I
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKM-QCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 392 FNRYPLKDV-VMWNSMITGYSQHG 414
+ P K W +++ HG
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHG 565
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G QVHA + S + + L+T Y A+ I + + WN +I Y++
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+ L EE + ++ M G+ PD ++ VL AC + V GR + S++
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKS---S 178
Query: 473 HYAC--MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
Y C ++ + R + A + ++M E DA+ W +++
Sbjct: 179 LYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVI 217
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 242/454 (53%), Gaps = 27/454 (5%)
Query: 160 VEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSG 215
+ +A K+FD +P DV++ T +IG + +E R EA F + + N T+ T++
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 216 YARNRRVDVARKL----FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC 271
+R V + ++L ++ N +A+L Y + +A FD VV+
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
+I G+ + + A ++F M ER TW+A+I + + G EA+ F M REG
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 332 L----NFPXXXXXXXXXXXXXXXDHGRQVHA---RLVRSEFDQDLYVASALITMYVKCGD 384
+ FP G+ +HA + + F+ ++V ++LI+ Y KCG+
Sbjct: 223 IPNESTFPCAITAISNIASHGA---GKSIHACAIKFLGKRFN--VFVWNSLISFYSKCGN 277
Query: 385 LVRAKWIFNRYP--LKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGV 441
+ + FN+ +++V WNSMI GY+ +G GEEA+ +F M + + P++++ +GV
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 442 LSACSYSGKVKEGREIFESMKCKYQVEPGI---EHYACMVDLLGRAGQVNDAVEIVEKMP 498
L AC+++G ++EG F Y +P + EHYACMVD+L R+G+ +A E+++ MP
Sbjct: 338 LFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 499 MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEV 558
++P W +LLG C+ H LA++A K+ +L+P++ YV+LS+ Y++ W++V +
Sbjct: 397 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Query: 559 VREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNN 592
+R K+K + + G SWIEV + +FV D N
Sbjct: 457 IRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKN 490
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
+A++ Y + A F+ T + N+VS ++SG++K EA +F AMP R+VV
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNVV--SWTVMLGGLLKDSRVED--ARKLFDMM 170
+W +++ G+ Q G EEA F M + VV + + + S + A K
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 171 PVK------DVVAVTNMIGGYCEEGRLEEARALFDEM--PKRNVVTWTTMVSGYARNRRV 222
+K +V ++I Y + G +E++ F+++ +RN+V+W +M+ GYA N R
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRG 311
Query: 223 DVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREASEFFD 261
+ A +FE M + N V+ +L H+G ++E +F+
Sbjct: 312 EEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFN 355
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 22/281 (7%)
Query: 69 QAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFD---AMPVR-NVVSWTSMVRGYV 124
A +F+ PE +++S ++ FVK EA + F + +R N ++ +++
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 125 QEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTN 180
+V+ ++L + NV + +L +K S + DAR+ FD +VV++TN
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 181 MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----- 235
+I GY ++ EEA +LF MP+R+VVTW ++ G+++ R + A F M
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPVK------PVVACNEMIMGFGFDGDVDRAKA 289
NE ++ + ++ A + A +K V N +I + G+++ +
Sbjct: 225 NESTFPCAITAISNIAS-HGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 290 VFEKMRE--RDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
F K+ E R+ +W++MI Y G EA+ +F +M ++
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKD 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 65/291 (22%)
Query: 22 TGAISRYARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
+ ++ Y ++ + +AR+ FD+T P++ T+ +++ Y + H+ +A++LF PE
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN----LISGYLKKHEFEEALSLFRAMPE 187
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAM------------------PVRNVVS------ 115
+++V+WN ++ GF + G EA F M + N+ S
Sbjct: 188 RSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKS 247
Query: 116 -----------------WTSMVRGYVQEGNVEEAERLFWRMPE--KNVVSWTVMLGGLLK 156
W S++ Y + GN+E++ F ++ E +N+VSW M+ G
Sbjct: 248 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 157 DSRVEDARKLFDMMPVKDVVAVTNMI-----------GGYCEEGRLEEARAL--FDEMPK 203
+ R E+A +F+ M VKD N + G +EG + +A+ +D+
Sbjct: 308 NGRGEEAVAMFEKM-VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL 366
Query: 204 RNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-WTAMLMG-YTHSGR 252
+ + MV +R+ R A +L + MP + W A+L G HS +
Sbjct: 367 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNK 417
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 258/555 (46%), Gaps = 54/555 (9%)
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVML 151
+ K+G V A ++FD +P +N ++W ++G + G + A LF MPE++VVSW M+
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 152 GGLLKDSRVE-DARKLFDMM-----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN 205
GL+ E R FDM P + ++ + G A+ + + N
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 168
Query: 206 VVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR----------MRE 255
+V W +++ Y R D A +F M +R+ VSW +++ + SG MRE
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 256 ASEFFDAMPVKPVVA------------------------CNEMIMGFGFD-----GDVDR 286
D V VV+ N +++G G D +D
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
+ +F ++ + D ++MI Y +AL LF + +
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPD-KFTFSSVLSSMN 347
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
DHG VH+ +++ FD D VA++L+ MY K G + A +F + KD++ WN++
Sbjct: 348 AVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 407 ITGYSQHGLGEEALNVFRDMCLS-GVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKY 465
I G +++ E+L +F + ++ + PD ++ +G+L AC Y+G V EG +IF SM+ +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 466 QVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVA 525
V PG EHYAC+++LL R G +N+A +I +K+P EP + +W +L A LAE
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 526 VEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHM 585
+ + + EPK++ PY++L +Y RWE+ +R + + G S I +E
Sbjct: 528 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 587
Query: 586 FV-------GGDNNC 593
F GG + C
Sbjct: 588 FEADQLQIHGGHDTC 602
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 1/347 (0%)
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
++++ + GD+ A +F ++ RD W+AMI Y +KG E E L ++ M++
Sbjct: 148 KLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 207
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
+ +HG++ HA +++ ++ V SAL+ MY KC +F
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
++ ++V+ W S+I+GY HG E L F M G P+ ++F+ VL+AC++ G V
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+G E F SMK Y +EP +HYA MVD LGRAG++ +A E V K P + VWGSLLGA
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 513 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLP 572
CR H + L E+A K +L+P N G YV+ ++ YAS G E VR K++ V K P
Sbjct: 388 CRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Query: 573 GYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAGYSPD 619
GYS IE++ + H F+ D+ H I K + + D Y PD
Sbjct: 448 GYSQIELQGEVHRFM-KDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+++HA++ F + Y+ L+ +Y GDL A +F ++D++ WN+MI+GY Q
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
GL +E L ++ DM + + PD +F V ACS +++ G+ M K ++ I
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM-IKRCIKSNII 245
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
+ +VD+ + +D + +++ + I W SL+ H K+ EK+ +
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVML 151
+ +G + A +F ++ +R+++ W +M+ GYVQ+G +E +++ M + +V
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 152 GGLLKD----SRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPK 203
+ + R+E ++ +M + +++ + ++ Y + + +FD++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 204 RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEF 259
RNV+TWT+++SGY + +V K FE M E N V++ +L H G + + E
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 260 FDAM 263
F +M
Sbjct: 333 FYSM 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 70 AVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----SWTSMVRGYVQ 125
A LF + ++++ WN M+SG+V+ G+ E ++ M +V ++ S+ R
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 126 EGNVEEAER----LFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNM 181
+E +R + R + N++ + ++ K S D ++FD + ++V+ T++
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMP---- 233
I GY G++ E F++M + N VT+ +++ VD + F M
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYG 341
Query: 234 -ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
E + AM+ +GR++EA EF P K
Sbjct: 342 IEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK 375
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 45 PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRV 104
P + S + A A H + + + NI+ + +V + K ++ RV
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVML-----GGLL 155
FD + RNV++WTS++ GY G V E + F +M E+ N V++ V+L GGL+
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 156 KDS--RVEDARKLFDMMPV-KDVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTT 211
++ + + P + A+ + +G GRL+EA + P K + W +
Sbjct: 327 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLG---RAGRLQEAYEFVMKSPCKEHPPVWGS 383
Query: 212 MVSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
++ + V + A K E+ P N ++ GY G +REA+
Sbjct: 384 LLGACRIHGNVKLLELAATKFLELDPT-NGGNYVVFANGYASCG-LREAA 431
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 218/408 (53%), Gaps = 23/408 (5%)
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNR---RVDVARKLF-EVMPER------NEVSW 240
L A ++ ++P +V + T++S N + +A L+ +++ R NE ++
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 241 TAMLMG------YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD-GDVDRAKAVFEK 293
++ + GR A PV ++GF + G + A+++FE+
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 294 MRERDDGTWSAMIKVY---ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+RE D TW+ ++ Y E + E L LF RMQ L+
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV-- 233
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
G H ++++ + +V ++LI +Y KCG L A+ +F+ +DV +N+MI G
Sbjct: 234 -RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGL 292
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
+ HG G+E + +++ + G+ PD +F+ +SACS+SG V EG +IF SMK Y +EP
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
+EHY C+VDLLGR+G++ +A E ++KMP++P+A +W S LG+ +TH + E+A++ L
Sbjct: 353 VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL 412
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIE 578
LE +N+G YVLLS++YA RW DVE RE +K V K PG S +
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 15/272 (5%)
Query: 156 KDSRVEDARKLFDMMPVK-DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ R A L + PV D ++G Y G+L EAR+LF+ + + ++ TW T+++
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLA 189
Query: 215 GYARNRRVDVARK---LFEVMPER-NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
YA + +D + LF M R NE+S A++ + G + +K +
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGV-WAHVYVLKNNLT 248
Query: 271 CNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
N+ + D G + A+ VF++M +RD ++AMI+ GF E + L+ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA--SALITMYVKCG 383
+G + D G Q+ + ++ + + V L+ + + G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 384 DLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG 414
L A+ + P+K + +W S + HG
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 31/280 (11%)
Query: 56 AMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMV---AEARRVFDAMPVR- 111
A+V Y + +A +LFE E ++ +WN +++ + + + E +F M VR
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMPE--KNVVSWTVMLGGLLKD-----SRVEDAR 164
N +S ++++ N+ E R W KN ++ +G L D + AR
Sbjct: 215 NELSLVALIKSC---ANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMVSGYARNR 220
K+FD M +DV MI G G +E L+ + + +V T+ +S + +
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 221 RVDVARKLFEVM-------PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
VD ++F M P+ L+G SGR+ EA E MPVKP
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG--RSGRLEEAEECIKKMPVKPNATLWR 389
Query: 274 MIMGFG-FDGDVDRAKAVFEK---MRERDDGTWSAMIKVY 309
+G GD +R + + + + G + + +Y
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIY 429
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 235/473 (49%), Gaps = 57/473 (12%)
Query: 107 AMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKL 166
A ++S T + Y +GN E+A LF +M S+ + L D+ V
Sbjct: 6 ASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHS----SFALPL-----DAHV------ 50
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
F + A ++GG ++ F P ++ Y + V AR
Sbjct: 51 FSLALKSCAAAFRPVLGGSVHA---HSVKSNFLSNP----FVGCALLDMYGKCLSVSHAR 103
Query: 227 KLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDR 286
KLF+ +P+RN V W AM+ YTH G+++EA E ++AM V P NE
Sbjct: 104 KLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMP----NE-----------SS 148
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERK---GFELEALGLFARMQREGAALNFPXXXXXXXX 343
A+ + + +DG++ A I+ Y + F+ + L A + A F
Sbjct: 149 FNAIIKGLVGTEDGSYRA-IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI------ 201
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
+++H+ R+ + + S L+ Y +CG +V + +F+ +DVV W
Sbjct: 202 ----------KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
+S+I+ Y+ HG E AL F++M L+ V PDDI+F+ VL ACS++G E F+ M+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 464 KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAE 523
Y + +HY+C+VD+L R G+ +A ++++ MP +P A WG+LLGACR + +++LAE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 524 VAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSW 576
+A +L +EP+N YVLL +Y S GR E+ E +R K+K V PG SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 40/320 (12%)
Query: 38 RKVFDETPHIHRTTSSW-------NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVS 90
R V + H H S++ A++ Y + A LF+ P++N V WN M+S
Sbjct: 63 RPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMIS 122
Query: 91 GFVKNGMVAEARRVFDAMPVR-NVVSWTSMVRGYV-QEGNVEEAERLFWRMPE----KNV 144
+ G V EA +++AM V N S+ ++++G V E A + +M E N+
Sbjct: 123 HYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNL 182
Query: 145 VSWTVMLGG--------LLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARA 196
++ ++ L+K+ R L + P + ++ Y G + +
Sbjct: 183 ITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLK----SGLVEAYGRCGSIVYVQL 238
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGR 252
+FD M R+VV W++++S YA + + A K F+ M +++++ +L +H+G
Sbjct: 239 VFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGL 298
Query: 253 MREASEFFDAM-------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG-TWSA 304
EA +F M K +C ++ G + A V + M E+ TW A
Sbjct: 299 ADEALVYFKRMQGDYGLRASKDHYSC--LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 305 MIKVYERKGFELEALGLFAR 324
++ G E+E + AR
Sbjct: 357 LLGACRNYG-EIELAEIAAR 375
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 19/187 (10%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
+G+V + + G + + VFD+M R+VV+W+S++ Y G+ E A + F M V
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 146 SWTVMLGGLLKDSR----VEDARKLFDMM-------PVKDVVAVTNMIGGYCEEGRLEEA 194
+ +LK ++A F M KD + ++ GR EEA
Sbjct: 281 PDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD--HYSCLVDVLSRVGRFEEA 338
Query: 195 RALFDEMPKRNVV-TWTTMVSGYARNRRVDV----ARKLFEVMPERNEVSWTAMLMGYTH 249
+ MP++ TW ++ +++ AR+L V PE N ++ + Y
Sbjct: 339 YKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE-NPANYVLLGKIYMS 397
Query: 250 SGRMREA 256
GR EA
Sbjct: 398 VGRQEEA 404
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 201/357 (56%), Gaps = 30/357 (8%)
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
+H ++VH ++S+F D + + +I+M+ +C + AK +F+ KD+ W+ M+ Y
Sbjct: 253 EHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAY 312
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
S +G+G++AL++F +M G+ P++ +F+ V AC+ G ++E F+SMK ++ + P
Sbjct: 313 SDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPK 372
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
EHY ++ +LG+ G + +A + + +P EP A W ++ R H +DL + E +
Sbjct: 373 TEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMV 432
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGD 590
++P A V+ +++ +V K + +++ ++ + E K
Sbjct: 433 DVDPSKA---VINKIPTPPPKSFKETNMVTSKSR---ILEFRNLTFYKDEAKE------- 479
Query: 591 NNCHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLL 650
+ G++ Y PD FVLHD+++E K +L YHSE+LAIAYG++
Sbjct: 480 -------------MAAKKGVV----YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGII 522
Query: 651 KVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
P + ++KNLRVCGDCH+ IK+++K+ GR +IVRD RFHHFKDG CSC DYW
Sbjct: 523 CTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 278/573 (48%), Gaps = 94/573 (16%)
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-----PEKNVVSWTVMLGG- 153
AR++FD M R+V+SW+ ++R YVQ +LF M E + V+ T +L
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 154 -LLKDSRVEDA------RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV 206
+++D V + R+ FD+ DV ++I Y + ++ A +FDE RN+
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDL---ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 207 VTWTTMVSGYARNRRVDVARKLFEVMP--------------------------------- 233
V+W ++++G+ N+R D A ++F +M
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 234 ------ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRA 287
E NEV+ ++++ YT + +A D+M K VV+C+ MI G G D A
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
++F MR+ + +I + L A + A ++ A
Sbjct: 414 ISIFCHMRDTPNAI--TVISL-------LNACSVSADLRTSKWA---------------- 448
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMI 407
HG + RS D+ V ++++ Y KCG + A+ F++ K+++ W +I
Sbjct: 449 ----HGIAIR----RSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
+ Y+ +GL ++AL +F +M G P+ ++++ LSAC++ G VK+G IF+SM +
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDH 559
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMP--MEPDAIVWGSLLGACRTHM-KLDLAEV 524
+P ++HY+C+VD+L RAG+++ AVE+++ +P ++ A WG++L CR KL +
Sbjct: 560 KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSE 619
Query: 525 AVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAH 584
V ++ +LEP + Y+L S +A++ WEDV ++R +K R V + GYS + A
Sbjct: 620 VVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAK 679
Query: 585 MFVGGDNNCHPEQPI--IMKMLERLDGLLRDAG 615
F+ GD + + +++ L R L AG
Sbjct: 680 RFLAGDKLSQSDSELNDVVQSLHRCMKLDDTAG 712
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 187/440 (42%), Gaps = 76/440 (17%)
Query: 36 NARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE-------TTPE--------- 79
+ARK+FDE R SW+ ++ +Y Q+ +P + LF+ T P+
Sbjct: 177 SARKLFDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 80 -------------------------KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
++ N ++ + K V A RVFD RN+V
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDM-MPVK 173
SW S++ G+V +EA +F M ++ V V + LL+ K F+ +P K
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR------VCKFFEQPLPCK 348
Query: 174 DV-------------VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
+ VA++++I Y +++A + D M ++VV+ +TM+SG A
Sbjct: 349 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG 408
Query: 221 RVDVARKLFEVMPER-NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG-- 277
R D A +F M + N ++ ++L + S +R S++ + ++ +A N++ +G
Sbjct: 409 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLR-TSKWAHGIAIRRSLAINDISVGTS 467
Query: 278 ----FGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
+ G ++ A+ F+++ E++ +W+ +I Y G +AL LF M+++G N
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN 393
G + +V + L S ++ M + G++ A +
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 394 RYPLKDV----VMWNSMITG 409
P +DV W ++++G
Sbjct: 588 NLP-EDVKAGASAWGAILSG 606
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 53/310 (17%)
Query: 3 YGYSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF 62
+G+S R + F C S I Y++ +++A +VFDET R SWN+++A +
Sbjct: 249 HGFSIRRGFDLADVFVCNSL--IDMYSKGFDVDSAFRVFDETT--CRNIVSWNSILAGFV 304
Query: 63 QAHQPHQAVTLF-----------ETTP----------------------------EKNIV 83
+ +A+ +F E T E N V
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK- 142
+ + ++ + +V +A V D+M ++VVS ++M+ G G +EA +F M +
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP 424
Query: 143 NVVSWTVMLGGL-----LKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARAL 197
N ++ +L L+ S+ + + + D+ T+++ Y + G +E AR
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRM 253
FD++ ++N+++WT ++S YA N D A LF+ M ++ N V++ A L H G +
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 254 REASEFFDAM 263
++ F +M
Sbjct: 545 KKGLMIFKSM 554
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 163/414 (39%), Gaps = 74/414 (17%)
Query: 229 FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPV---KP--------VVAC------ 271
F+ M R+ VSW ++ G G E +F + V +P + AC
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD 143
Query: 272 NEMIMGF----GF---------------DGDVDRAKAVFEKMRERDDGTWSAMIKVYERK 312
E I G+ GF D D A+ +F++M ERD +WS +I+ Y +
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 313 GFELEALGLFARMQREGAA-LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD-QDLY 370
+ L LF M E + D GR VH +R FD D++
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG 430
V ++LI MY K D+ A +F+ +++V WNS++ G+ + +EAL +F M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 431 VPPDDISFIGVLSACSY--------------------SGKVKEGREIFESMKCKYQVEPG 470
V D+++ + +L C + S +V I C + G
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 471 ----------IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD 520
+ + M+ L AG+ ++A+ I M P+AI SLL AC L
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLR 443
Query: 521 LAE----VAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIK 570
++ +A+ + + + G ++ YA G E ++I +++I
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCGAIEMARRTFDQITEKNIIS 495
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----ETT 77
+ I Y +++A V D + + S + M++ A + +A+++F +T
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTY--KDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP 424
Query: 78 PEKNIVSWNGM--VSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERL 135
++S VS ++ A + ++ + ++ TS+V Y + G +E A R
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 136 FWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV--AVTNMIG-GYCEEGRLE 192
F ++ EKN++SWTV++ + + A LFD M K AVT + C G L
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 193 EA-----RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV---SWTAML 244
+ +++ +E K ++ ++ +V +R +D A +L + +PE + +W A+L
Sbjct: 545 KKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
Query: 245 MG 246
G
Sbjct: 605 SG 606
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 180/297 (60%), Gaps = 2/297 (0%)
Query: 282 GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
G+ + A+ VF++ ER G+W+A+I G EA+ +F M+R G +
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 342 XXXXXXXXXDHGRQVHARLV--RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD 399
Q+H ++ ++E D+ + ++LI MY KCG + A IF ++
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
VV W+SMI GY+ +G EAL FR M GV P+ I+F+GVLSAC + G V+EG+ F
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 460 SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
MK ++++EPG+ HY C+VDLL R GQ+ +A ++VE+MPM+P+ +VWG L+G C +
Sbjct: 346 MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDV 405
Query: 520 DLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSW 576
++AE + +LEP N G YV+L+++YA +G W+DVE VR+ +KT+ V K+P YS+
Sbjct: 406 EMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 53/255 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
+G I+ Y + G+ ENARKVFDE P R SWNA++ A + ++AV +F
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPE--RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG 213
Query: 75 ----------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAE 100
+T + +I+ N ++ + K G +
Sbjct: 214 LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDL 273
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLK 156
A +F+ M RNVVSW+SM+ GY GN EA F +M E N +++ +L +
Sbjct: 274 ASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVH 333
Query: 157 DSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWT 210
VE+ + F MM + + ++ +G+L+EA+ + +EMP K NV+ W
Sbjct: 334 GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWG 393
Query: 211 TMVSGYARNRRVDVA 225
++ G + V++A
Sbjct: 394 CLMGGCEKFGDVEMA 408
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 103/210 (49%), Gaps = 2/210 (0%)
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
W+ +++ Y R L+A+ ++ M R + G+++H+ V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALN 421
R F D + S IT+Y K G+ A+ +F+ P + + WN++I G + G EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 422 VFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES-MKCKYQVEPGIEHYACMVDL 480
+F DM SG+ PDD + + V ++C G + ++ + ++ K + + I ++D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 481 LGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
G+ G+++ A I E+M + + + W S++
Sbjct: 265 YGKCGRMDLASHIFEEM-RQRNVVSWSSMI 293
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
+G ++ + K G AR+VFD P R + SW +++ G G EA +F M +
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 145 ------VSWTVMLGGLLKDSRVEDARKLFDMMPVK---DVVAVTNMIGGYCEEGRLEEAR 195
VS T GGL S K + D++ + ++I Y + GR++ A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 196 ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPE----RNEVSWTAMLMGYTHSG 251
+F+EM +RNVV+W++M+ GYA N A + F M E N++++ +L H G
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 252 RMREASEFFDAMP----VKPVVACNEMIMG-FGFDGDVDRAKAVFEKM 294
+ E +F M ++P ++ I+ DG + AK V E+M
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 145/360 (40%), Gaps = 78/360 (21%)
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
R+ D P+ + W +++R Y++ + +A +++ M V+ L ++K
Sbjct: 74 RILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKA----- 126
Query: 163 ARKLFDMMPVKDVVAVTNMIG----GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYAR 218
A ++ D K++ +V +G +CE G ++ Y +
Sbjct: 127 AVQIHDFTLGKELHSVAVRLGFVGDEFCESG----------------------FITLYCK 164
Query: 219 NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF-----------DAMPVKP 267
+ ARK+F+ PER SW A++ G H+GR EA E F D V
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224
Query: 268 VVAC------------------------------NEMIMGFGFDGDVDRAKAVFEKMRER 297
+C N +I +G G +D A +FE+MR+R
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR 284
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVH 357
+ +WS+MI Y G LEAL F +M+ G N + G+
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344
Query: 358 ARLVRSEFDQD--LYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYSQHG 414
A +++SEF+ + L ++ + + G L AK + P+K +V++W ++ G + G
Sbjct: 345 A-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 194/339 (57%), Gaps = 4/339 (1%)
Query: 255 EASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGF 314
A + FD MP K +V N ++ + GDV A+ VF++M ERD TWS+MI Y ++G
Sbjct: 161 SARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGE 220
Query: 315 ELEALGLFARMQREGAA-LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVAS 373
+AL +F +M R G++ N + G+ VH ++ + + +
Sbjct: 221 YNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQT 280
Query: 374 ALITMYVKCGDLVRAKWIFNRYPLK--DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV 431
+LI MY KCG + A +F R +K D +MWN++I G + HG E+L +F M S +
Sbjct: 281 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV 491
PD+I+F+ +L+ACS+ G VKE F+S+K + EP EHYACMVD+L RAG V DA
Sbjct: 341 DPDEITFLCLLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 492 EIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKG 551
+ + +MP++P + G+LL C H L+LAE +KL +L+P N G YV L+++YA
Sbjct: 400 DFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINK 459
Query: 552 RWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGD 590
++ +RE ++ + V K+ G+S ++++ H F+ D
Sbjct: 460 QFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHD 498
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 19/226 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N ++ Y A LF+ P KN+V+WN ++ + K+G V AR VFD M R+VV
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEK-----------NVVSWTVMLGGLLKDSRVEDA 163
+W+SM+ GYV+ G +A +F +M +V+ LG L + V
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH-- 264
Query: 164 RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF--DEMPKRNVVTWTTMVSGYARNRR 221
R + D+ V+ T++I Y + G + +A ++F + + + + W ++ G A +
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
Query: 222 VDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
+ + +LF M E +E+++ +L +H G ++EA FF ++
Sbjct: 325 IRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 29/317 (9%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET 76
F C + I Y +ARK+FDE PH + +WN+++ AY ++ A +F+
Sbjct: 144 FICNTL--IHMYGSFRDQASARKLFDEMPH--KNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 77 TPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM-----PVRNVVSWTSMV-----RGYVQE 126
E+++V+W+ M+ G+VK G +A +FD M N V+ S++ G +
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 127 GNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAV--TNMIGG 184
G L +P V+ T ++ K + DA +F VK+ A+ +IGG
Sbjct: 260 GKTVHRYILDVHLP-LTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 185 YCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPER----N 236
G + E+ LF +M + + +T+ +++ + V A F+ + E
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 237 EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA-CNEMIMGFGFDGDVDRAKAVFEKMR 295
+ M+ + +G +++A +F MP+KP + ++ G G+++ A+ V +K+
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 296 E---RDDGTWSAMIKVY 309
E +DG + + VY
Sbjct: 439 ELQPHNDGRYVGLANVY 455
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 50/314 (15%)
Query: 63 QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRG 122
+ ++ H + + E+ VS S +G V A + + W ++RG
Sbjct: 23 ELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRG 82
Query: 123 YVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--------D 174
+ N E++ ++ +M ++ + L+K S RKL + D
Sbjct: 83 FSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWD 142
Query: 175 VVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPE 234
+ +I Y AR LFDEMP +N+VTW +++ YA++ V AR +F+ M E
Sbjct: 143 LFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSE 202
Query: 235 RNEVSWTAMLMGYTHSGRMREASEFFDAM------------PVKPVVAC----------- 271
R+ V+W++M+ GY G +A E FD M V + AC
Sbjct: 203 RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKT 262
Query: 272 -----------------NEMIMGFGFDGDVDRAKAVFEK--MRERDDGTWSAMIKVYERK 312
+I + G + A +VF + ++E D W+A+I
Sbjct: 263 VHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
Query: 313 GFELEALGLFARMQ 326
GF E+L LF +M+
Sbjct: 323 GFIRESLQLFHKMR 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 34/284 (11%)
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
+P V+ GDVD A K+ + + W+ +I+ + +++ ++ +M
Sbjct: 40 EPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQM 99
Query: 326 QREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL 385
R G + G +H +V+S + DL++ + LI MY D
Sbjct: 100 LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQ 159
Query: 386 VRAKWIFNRYPLKDVVMWN-------------------------------SMITGYSQHG 414
A+ +F+ P K++V WN SMI GY + G
Sbjct: 160 ASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRG 219
Query: 415 LGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
+AL +F M G ++++ + V+ AC++ G + G+ + + + +
Sbjct: 220 EYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYI-LDVHLPLTVIL 278
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPM-EPDAIVWGSLLGACRTH 516
++D+ + G + DA + + + E DA++W +++G +H
Sbjct: 279 QTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 291/617 (47%), Gaps = 75/617 (12%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S+G I Y + A VF+E + SSW M+AAY + + LF+
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEV--WRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 81 NI----------VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVE 130
++ + V VK G+ V + + +V TS++ Y + G +E
Sbjct: 295 DVRMNKVAAASALQAAAYVGDLVK-GIAIHDYAVQQGL-IGDVSVATSLMSMYSKCGELE 352
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF-DMMPVK---DVVAVTNMIGGYC 186
AE+LF + +++VVSW+ M+ + + ++A LF DMM + + V +T+++ G
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 187 EEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTA 242
+++ K ++ T T ++S YA+ R A K FE +P ++ V++ A
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVA--------------CNE---------MIMGFG 279
+ GYT G +A + + M + V C++ I+ G
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 280 FDGDVDRAKA----------------VFEKMR-ERDDGTWSAMIKVYERKGFELEALGLF 322
FD + A A +F+K E+ +W+ M+ Y G EA+ F
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
+M+ E N G VH+ L++ F V ++L+ MY KC
Sbjct: 593 RQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKC 652
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
G + ++ F K +V WN+M++ Y+ HGL A+++F M + + PD +SF+ VL
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVL 712
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
SAC ++G V+EG+ IFE M ++++E +EHYACMVDLLG+AG +AVE++ +M ++
Sbjct: 713 SACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTS 772
Query: 503 AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREK 562
VWG+LL + R H L L+ A+ +L +LEP N SH Y+ R +V V +
Sbjct: 773 VGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNP------SH-YSQDRRLGEVNNV-SR 824
Query: 563 IKTRSVIKLPGYSWIEV 579
IK K+P SWIEV
Sbjct: 825 IK-----KVPACSWIEV 836
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 223/480 (46%), Gaps = 20/480 (4%)
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAER 134
E E ++ +V + K + AR+VFD M V++VV+W +MV G Q G A
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 135 LFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAV--TNMIGGYCEE 188
LF M V VS ++ + K + + R L ++ K + + +I YC
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNC 247
Query: 189 GRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPE----RNEVSWTAML 244
L A ++F+E+ +++ +W TM++ YA N + +LF++M N+V+ + L
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 245 MGYTHSGRMREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
+ G + + D + V ++ + G+++ A+ +F + +RD
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
+WSAMI YE+ G EA+ LF M R N G+ +H
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
++++ + +L A+A+I+MY KCG A F R P+KD V +N++ GY+Q G +A
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF 487
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF-ESMKCKYQVEPGIEHYACMVD 479
+V+++M L GV PD + +G+L C++ G ++ + +K + E + H +++
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALIN 545
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ + + A+ + +K E + W ++ H + AE AV Q++ + P
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ---AEEAVATFRQMKVEKFQP 602
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 200/425 (47%), Gaps = 19/425 (4%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV-----SWTVMLGGLL 155
+R +FD++ VV W SM+RGY + G EA F M E+ + S+T L
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 156 KDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
+ ++ D++ DV T ++ YC+ L AR +FD+M ++VVTW T
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 212 MVSGYARNRRVDVARKLFEVM----PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
MVSG A+N A LF M + + VS ++ + + + + +K
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK-SDVCRCLHGLVIKK 230
Query: 268 ---VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
+ +I + D+ A++VFE++ +D+ +W M+ Y GF E L LF
Sbjct: 231 GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDL 290
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGD 384
M+ +N G +H V+ D+ VA++L++MY KCG+
Sbjct: 291 MRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE 350
Query: 385 LVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
L A+ +F +DVV W++MI Y Q G +EA+++FRDM + P+ ++ VL
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG 410
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAI 504
C+ + G+ I K +E +E ++ + + G+ + A++ E++P++ DA+
Sbjct: 411 CAGVAASRLGKSI-HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAV 468
Query: 505 VWGSL 509
+ +L
Sbjct: 469 AFNAL 473
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+++T +L+ R + ++ V + N++I + D ++ +F+ +R+
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDP 62
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQRE-GAALNFPXXXXXXXXXXXXXXXDHGRQV 356
W++MI+ Y R G EALG F M E G + G ++
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 357 HARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLG 416
H + + D+Y+ +AL+ MY K DLV A+ +F++ +KDVV WN+M++G +Q+G
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACS 446
AL +F DM V D +S ++ A S
Sbjct: 183 SAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 180/460 (39%), Gaps = 100/460 (21%)
Query: 212 MVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP----VKP 267
+++ Y+ +R D++R +F+ + + V W +M+ GYT +G REA FF M + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 268 --------VVAC------------NEMIMGFGFDGDVD----------------RAKAVF 291
+ AC +++I G + DV A+ VF
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 292 EKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
+KM +D TW+ M+ + G AL LF M+ ++ D
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
R +H +++ F +S LI MY C DL A+ +F KD W +M+ Y+
Sbjct: 219 VCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 412 QHGLGEEALNVFRDM------------------------CLSGVPPDDIS----FIG--- 440
+G EE L +F M + G+ D + IG
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 441 ----VLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
++S S G+++ ++F +++ + + ++ M+ +AGQ ++A+ +
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIE-----DRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 497 M---PMEPDAIVWGSLLGAC------RTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMY 547
M ++P+A+ S+L C R + + + ++LE A + MY
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATA-----VISMY 446
Query: 548 ASKGRWEDVEVVREKIKTRSVIKL----PGYSWIEVEKKA 583
A GR+ E++ + + GY+ I KA
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 219/422 (51%), Gaps = 44/422 (10%)
Query: 196 ALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMRE 255
+D++ +N + V G +RN A K+F MP R+ VSWT ++ G+T +G +E
Sbjct: 136 GFYDDIYVQNSLVHFYGVCGESRN-----ACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 256 ASEFFDAMPVKPVVACNEMIM-----------GFGFDG---------------------- 282
A + F M V+P +A ++ G G G
Sbjct: 191 ALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 283 ---DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ-REGAALNFPXXX 338
+ A VF ++ ++D +W++MI EA+ LF+ MQ G +
Sbjct: 251 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 310
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
DHGR VH ++ + D ++ +A++ MY KCG + A IFN K
Sbjct: 311 SVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK 370
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
+V WN+++ G + HG G E+L F +M G P+ ++F+ L+AC ++G V EGR F
Sbjct: 371 NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 459 ESMKCK-YQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHM 517
MK + Y + P +EHY CM+DLL RAG +++A+E+V+ MP++PD + G++L AC+
Sbjct: 431 HKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
Query: 518 KL-DLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSW 576
L +L + ++ +E +++G YVLLS+++A+ RW+DV +R +K + + K+PG S+
Sbjct: 491 TLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSY 550
Query: 577 IE 578
IE
Sbjct: 551 IE 552
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 57/327 (17%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR-NV 113
N++V Y + A +F P +++VSW G+++GF + G+ EA F M V N+
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNL 204
Query: 114 VSW-----------------------------------TSMVRGYVQEGNVEEAERLFWR 138
++ +++ YV+ + +A R+F
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE 264
Query: 139 MPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA-----VTNMIGGYCEEGRLEE 193
+ +K+ VSW M+ GL+ R ++A LF +M + +T+++ G ++
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 194 ARALFDEMPKRNVVTW-----TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYT 248
R + + + + W T +V YA+ ++ A ++F + +N +W A+L G
Sbjct: 325 GRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLA 383
Query: 249 HSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT--- 301
G E+ +F+ M KP +V + G VD + F KM+ R+
Sbjct: 384 IHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPK 443
Query: 302 ---WSAMIKVYERKGFELEALGLFARM 325
+ MI + R G EAL L M
Sbjct: 444 LEHYGCMIDLLCRAGLLDEALELVKAM 470
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+Q+H + + F D+YV ++L+ Y CG+ A +F P++DVV W +ITG+++
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
GL +EAL+ F M V P+ +++ VL + G + G+ I + K +E
Sbjct: 185 TGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGI-HGLILKRASLISLE 240
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
++D+ + Q++DA+ + ++ + D + W S++
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISG 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 42/264 (15%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T I Y + Q+ +A +VF E + SWN+M++ + +A+ LF
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEK--KDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 80 KNIVSWNG-----MVSGFVKNGMVAEARRVFDAMPVRNVVSW-----TSMVRGYVQEGNV 129
+ + +G ++S G V R V + + + W T++V Y + G +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYI 357
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGL-LKDSRVEDARKLFDMMPV---KDVVAVTNMIGGY 185
E A +F + KNV +W +LGGL + +E R +M+ + ++V +
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 186 CEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLM 245
C G ++E R F +M R + + P+ + M+
Sbjct: 418 CHTGLVDEGRRYFHKMKSRE-----------------------YNLFPKLEH--YGCMID 452
Query: 246 GYTHSGRMREASEFFDAMPVKPVV 269
+G + EA E AMPVKP V
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDV 476
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 22 TGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T +S A +G +++ R V + T I T A+V Y + A+ +F
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERL 135
KN+ +WN ++ G +G E+ R F+ M N+V++ + + G V+E R
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRY 429
Query: 136 FWRMPEK------NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEE- 188
F +M + + + M+ L + +++A +L MPVK V + I C+
Sbjct: 430 FHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNR 489
Query: 189 GRL----EEARALFDEMPKRNVVTWTTMVSGYARNRR-VDVAR 226
G L +E F ++ + + + + +A NRR DVAR
Sbjct: 490 GTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVAR 532
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/595 (27%), Positives = 266/595 (44%), Gaps = 94/595 (15%)
Query: 24 AISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV 83
AI Y + G +++AR++F+E P R SWNA++ A Q + +F +
Sbjct: 102 AIEAYGKCGCVDDARELFEEMPE--RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 84 SWNGMVSGFVKN-GMV--------------------------------------AEARRV 104
+ +G +K+ G++ ++ARRV
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-----VSWTVMLGGLLKDSR 159
FD + + VSW +VR Y++ G +EA +F++M E NV +VML S
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA--CSRSL 277
Query: 160 VEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ K+ + VK D V T++ Y + RLE AR +FD+ +++ +WT+ +S
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 215 GYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK-------- 266
GYA + AR+LF++MPERN VSW AML GY H+ EA +F M +
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVT 397
Query: 267 -------------------------------PVVACNEMIMGFGFDGDVDRAKAVFEKMR 295
V+ N ++ +G G + A F +M
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 296 E-RDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGR 354
E RD+ +W+A++ R G +AL F MQ E + + G+
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPAL-NLGK 516
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
+H L+R + D+ + A++ MY KC A +F +D+++WNS+I G ++G
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNG 576
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
+E +F + GV PD ++F+G+L AC G V+ G + F SM KY + P +EHY
Sbjct: 577 RSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHY 636
Query: 475 ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
CM++L + G ++ E + MP +P + + AC+ + L A ++L
Sbjct: 637 DCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 138/586 (23%), Positives = 229/586 (39%), Gaps = 131/586 (22%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPH---------IHRTTSSWNAMVAAYFQAHQPHQA 70
T T I + G + A V +P + R+ SS A+V QA +
Sbjct: 31 TVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSS-KALVV---QARKVQSH 86
Query: 71 VTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVE 130
+ F P I N + + K G V +AR +F+ MP R+ SW +++ Q G +
Sbjct: 87 LVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSD 144
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLLK------DSRV------------------------ 160
E R+F RM V + G+LK D R+
Sbjct: 145 EVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 161 ---------EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----- 206
DAR++FD + V+ ++ Y E G +EA +F +M + NV
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH 264
Query: 207 ----------------------------------VTWTTMVSGYARNRRVDVARKLFEVM 232
V T++ Y + R++ AR++F+
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFE 292
++ SWT+ + GY SG REA E FD MP + +V+ N M+ G+ + D
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWD------- 377
Query: 293 KMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH 352
EAL M++E ++
Sbjct: 378 ------------------------EALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK-WIFNRYPLKDVVMWNSMITGYS 411
G+Q H + R +D ++ VA+AL+ MY KCG L A W L+D V WN+++TG +
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM-KCKYQVEPG 470
+ G E+AL+ F M + P + +L+ C+ + G+ I + + Y+++
Sbjct: 474 RVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL-GACRT 515
I MVD+ + + A+E+ ++ D I+W S++ G CR
Sbjct: 533 IR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRN 575
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 158/394 (40%), Gaps = 88/394 (22%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y + + +AR+VFDE ++ + SWN +V Y + +AV +F E N
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEI--VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN 258
Query: 82 IVSWNGMVSG---------------------------------------FVKNGMVAEAR 102
+ N VS +VK + AR
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESAR 318
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
RVFD +++ SWTS + GY G EA LF MPE+N+VSW MLGG + ++
Sbjct: 319 RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 163 ARKLFDMM--PVKDVVAVT-----NMIGGYCEEGRLEEARA-LFDEMPKRNVVTWTTMVS 214
A +M ++++ VT N+ G + ++A ++ NV+ ++
Sbjct: 379 ALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD 438
Query: 215 GYARNRRVDVARKLFEVMPE-RNEVSWTAMLMGYTHSGRMREASEFFDAMPVK------- 266
Y + + A F M E R+EVSW A+L G GR +A FF+ M V+
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYT 498
Query: 267 -----------PVVACNEMIMGF----GFDGDV----------------DRAKAVFEKMR 295
P + + I GF G+ DV D A VF++
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 296 ERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
RD W+++I+ R G E LF ++ EG
Sbjct: 559 TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEG 592
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 19/343 (5%)
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFA 323
P+ P+ N I +G G VD A+ +FE+M ERD G+W+A+I + G E +F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 324 RMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCG 383
RM R+G RQ+H +V+ + ++ + ++++ +Y KC
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
+ A+ +F+ V WN ++ Y + G +EA+ +F M V P + + V+
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDA 503
ACS S ++ G+ + ++ K V + D+ + ++ A + ++ D
Sbjct: 272 ACSRSLALEVGK-VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ-TRSKDL 329
Query: 504 IVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWED----VEVV 559
W S + + L A E + +N + + Y W++ + ++
Sbjct: 330 KSWTSAMSG---YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
Query: 560 REKIKTRSVIKL-------PGYSWIEVEKKAHMFV---GGDNN 592
R++I+ + L G S +++ K+AH F+ G D N
Sbjct: 387 RQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 49/288 (17%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
ST Y + ++E+AR+VFD+T + SW + ++ Y + +A LF+ PE
Sbjct: 300 VSTSVFDMYVKCDRLESARRVFDQTRS--KDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR---------------------------- 111
+NIVSWN M+ G+V EA M
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 112 -----------NVVSWTSMVRGYVQEGNVEEAERLFWRMPE-KNVVSWTVMLGGLLKDSR 159
NV+ +++ Y + G ++ A F +M E ++ VSW +L G+ + R
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 160 VEDARKLFDMMPVK---DVVAVTNMIGGYCEEGRLEEARA----LFDEMPKRNVVTWTTM 212
E A F+ M V+ + ++ G L +A L + K +VV M
Sbjct: 478 SEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAM 537
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF 260
V Y++ R D A ++F+ R+ + W +++ G +GR +E E F
Sbjct: 538 VDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
R+V + LV +++ + I Y KCG + A+ +F P +D WN++IT +
Sbjct: 79 QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA 138
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
Q+G+ +E +FR M GV + SF GVL +C ++ R++ ++ KY +
Sbjct: 139 QNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV-VKYGYSGNV 197
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ 531
+ +VD+ G+ ++DA + +++ + P + W ++ R ++++ + AV +
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV---RRYLEMGFNDEAVVMFFK 253
Query: 532 LEPKNAGPYVLLSHMYAS 549
+ N P L+H +S
Sbjct: 254 MLELNVRP---LNHTVSS 268
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 199/350 (56%), Gaps = 14/350 (4%)
Query: 254 REASEFFDAMPVKPVVACNEMIMGFGFD-GDVDRAKAVFEKMRERDDGT-WSAMIKVYER 311
R+ + V+ ++GF GDVD A+ VF++ E+ + W+AMI Y
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 312 KGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE--FDQDL 369
+EA+ LF RM+ E L+ G ++++R ++ + DL
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 370 YVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL- 428
+ ++L+ MYVK G+ +A+ +F+ KDV + SMI GY+ +G +E+L +F+ M
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 429 -----SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+ + P+D++FIGVL ACS+SG V+EG+ F+SM Y ++P H+ CMVDL R
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 484 AGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 543
+G + DA E + +MP++P+ ++W +LLGAC H ++L E ++ +L+ + G YV L
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVAL 384
Query: 544 SHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGG-DNN 592
S++YASKG W++ +R++++ R ++PG SWIE+ + FV G DNN
Sbjct: 385 SNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNN 431
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 61/321 (19%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y+ +G ++ AR+VFDETP ++N
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPE--------------------------------KQN 131
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERLFW 137
IV W M+S + +N EA +F M + V T + G V+ E ++
Sbjct: 132 IVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYS 191
Query: 138 RMPEK------NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRL 191
R ++ ++ +L +K E ARKLFD KDV T+MI GY G+
Sbjct: 192 RSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQA 251
Query: 192 EEARALFDEMP----------KRNVVTWTTMVSGYARNRRVDVARKLFEVMP-----ERN 236
+E+ LF +M N VT+ ++ + + V+ ++ F+ M +
Sbjct: 252 QESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPR 311
Query: 237 EVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGF-GFDGDVDRAKAVFEKMR 295
E + M+ + SG +++A EF + MP+KP ++G G+V+ + V ++
Sbjct: 312 EAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIF 371
Query: 296 ERDD---GTWSAMIKVYERKG 313
E D G + A+ +Y KG
Sbjct: 372 ELDRDHVGDYVALSNIYASKG 392
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWNSMITGYS 411
GRQ+HA + + F+ + + ++L+ Y GD+ A+ +F+ P K ++V+W +MI+ Y+
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE-SMKCKYQVEPG 470
++ EA+ +F+ M + D + LSAC+ G V+ G EI+ S+K K ++
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ ++++ ++G+ A ++ ++ M D + S++
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMI 242
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 116/282 (41%), Gaps = 53/282 (18%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHR----TTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T A+S A +G ++ +++ + R + N+++ Y ++ + +A LF+ +
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES 230
Query: 78 PEKNIVSWNGMVSGFVKNGMVAEARRVF----------DAMPVRNVVSWTSMVRGYVQEG 127
K++ ++ M+ G+ NG E+ +F D + N V++ ++ G
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 128 NVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCE 187
VEE +R F M + D ++ F M+ +C
Sbjct: 291 LVEEGKRHFKSM---------------IMDYNLKPREAHFGC-----------MVDLFCR 324
Query: 188 EGRLEEARALFDEMP-KRNVVTWTTMVSGYARNRRV----DVARKLFEVMPERNEV-SWT 241
G L++A ++MP K N V W T++ + + V +V R++FE+ +R+ V +
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL--DRDHVGDYV 382
Query: 242 AMLMGYTHSGRMREASEFFD-----AMPVKPVVACNEMIMGF 278
A+ Y G E S+ D MP K + +I F
Sbjct: 383 ALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEF 424
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 235/504 (46%), Gaps = 21/504 (4%)
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSW 147
+ N + AR++FD P R+V W S++R Y + LF ++ + ++
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPK 203
+ G + + R + + V D + + ++ Y + G + EA LF +P
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 204 RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEF 259
++ W M+ GY D LF +M R N + A+ G + A
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 260 FDAMPVK------PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKG 313
A +K V C ++ + + A +VF + E D S++I Y R G
Sbjct: 230 -HAFCLKINLDSHSYVGC-ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 314 FELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVAS 373
EAL LFA ++ G + G++VH+ ++R + D+ V S
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCS 347
Query: 374 ALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPP 433
ALI MY KCG L A +F P K++V +NS+I G HG A F ++ G+ P
Sbjct: 348 ALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIP 407
Query: 434 DDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEI 493
D+I+F +L C +SG + +G+EIFE MK ++ +EP EHY MV L+G AG++ +A E
Sbjct: 408 DEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEF 467
Query: 494 VEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY-VLLSHMYASKGR 552
V + D+ + G+LL C H LAEV E + + + Y V+LS++YA GR
Sbjct: 468 VMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGR 527
Query: 553 WEDVEVVREKIKTRSVIKLPGYSW 576
W++VE +R+ I KLPG SW
Sbjct: 528 WDEVERLRDGISESYGGKLPGISW 551
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 159/374 (42%), Gaps = 25/374 (6%)
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM 232
+D T + Y L AR LFD P+R+V W +++ YA+ + LF +
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD----------- 281
+ +T++ R SE FD ++ + ++ G GFD
Sbjct: 98 LRSDTRP-----DNFTYACLARGFSESFDTKGLRCIHGI-AIVSGLGFDQICGSAIVKAY 151
Query: 282 ---GDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
G + A +F + + D W+ MI Y GF + + LF MQ G N
Sbjct: 152 SKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMV 211
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK 398
VHA ++ D YV AL+ MY +C + A +FN
Sbjct: 212 ALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEP 271
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D+V +S+ITGYS+ G +EAL++F ++ +SG PD + VL +C+ G+E+
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV- 330
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMK 518
S + +E I+ + ++D+ + G + A+ + +P E + + + SL+ H
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLH-- 387
Query: 519 LDLAEVAVEKLAQL 532
A A EK ++
Sbjct: 388 -GFASTAFEKFTEI 400
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 53/297 (17%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY---------------- 61
Q + + Y++ G I A K+F P + WN M+ Y
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPD--PDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 62 -FQAHQPHQ----AVTLFETTPEKNIVSWN------------------GMVSGFVKNGMV 98
+ HQP+ A+T P +V+W+ +V+ + + +
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 99 AEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLF--WRMPEK--NVVSWTVMLGGL 154
A A VF+++ ++V+ +S++ GY + GN +EA LF RM K + V ++LG
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 155 LKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWT 210
+ S +++ + D+ + +I Y + G L+ A +LF +P++N+V++
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 211 TMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM 263
+++ G + A + F + E +E++++A+L HSG + + E F+ M
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+++H+ + +S+ +D Y A+ L Y DL+ A+ +F+ +P + V +WNS+I Y++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP---- 469
L++F + S PD+ ++ + S S K ++C + +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTK-------GLRCIHGIAIVSGL 137
Query: 470 GIEHY--ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL---GAC 513
G + + +V +AG + +A ++ +P +PD +W ++ G C
Sbjct: 138 GFDQICGSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCC 185
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 268/508 (52%), Gaps = 31/508 (6%)
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSW 147
F++N A +FD +P R++ S S + +++ GN + LF ++ P+ + ++
Sbjct: 29 FIRN-FATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTF 87
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPVKD----VVAVTNMIGGYCEEGRLEEARALFDEMPK 203
T +LG S E R++ +M + ++ T +I Y + G L ++ +F+ + +
Sbjct: 88 TPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEE 147
Query: 204 RNVVTWTTMVSGYARNRRVDVARKLFEVM-PERNEVSWTAM--LMGYTHSGRMREASEFF 260
+++V+W ++SG+ RN + A +F M ER E+S + ++ S ++ + +
Sbjct: 148 KDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQV 207
Query: 261 DAMPVKP----VVACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMIKVYERKGFE 315
AM V VV MI + G ++ A V+ + D+ +++I R
Sbjct: 208 HAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY 267
Query: 316 LEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
EA L +R QR N G+Q+H +R+ F D + + L
Sbjct: 268 KEAFLLMSR-QRP----NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL--SGVPP 433
+ MY KCG +V+A+ IF P K VV W SMI Y+ +G G +AL +FR+MC SGV P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 434 DDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEI 493
+ ++F+ V+SAC+++G VKEG+E F MK KY++ PG EHY C +D+L +AG+ + +
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 494 VEKMPMEPD-----AIVWGSLLGACRTHMKLDLAE-VAVEKLAQLEPKNAGPYVLLSHMY 547
VE+M ME D +W ++L AC +M L E VA + + P+NA YVL+S+ Y
Sbjct: 443 VERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 548 ASKGRWEDVEVVREKIKTRSVIKLPGYS 575
A+ G+W+ VE +R K+K + ++K G+S
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 23/298 (7%)
Query: 51 TSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV 110
T S A++ Y + +V +FE+ EK++VSWN ++SGF++NG EA VF AM
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 111 RNV----VSWTSMVRG-----YVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
V + +S+V+ +Q+G ++ + VV T M+ +
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQG--KQVHAMVVVTGRDLVVLGTAMISFYSSVGLIN 236
Query: 162 DARKLFDMMPV-KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
+A K+++ + V D V + ++I G +EA L + NV ++ ++G + N
Sbjct: 237 EAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNVRVLSSSLAGCSDNS 295
Query: 221 RVDVARKLFEVMPERNEVSWTAMLMG----YTHSGRMREASEFFDAMPVKPVVACNEMIM 276
+ + +++ V VS + + G Y G++ +A F A+P K VV+ MI
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMID 355
Query: 277 GFGFDGDVDRAKAVFEKMRERDDG------TWSAMIKVYERKGFELEALGLFARMQRE 328
+ +GD +A +F +M E G T+ +I G E F M+ +
Sbjct: 356 AYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 131/274 (47%), Gaps = 17/274 (6%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
+ + E +S ++ + K G + ++ RVF+++ +++VSW +++ G+++ G +EA
Sbjct: 110 MIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEA 169
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSR----VEDARKLFDMMPV--KDVVAV-TNMIGGY 185
+F M + V L ++K ++ +++ M+ V +D+V + T MI Y
Sbjct: 170 LGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFY 229
Query: 186 CEEGRLEEARALFDEMP-KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER--NEVSWTA 242
G + EA +++ + + V +++SG RNR ++ F +M + N ++
Sbjct: 230 SSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY---KEAFLLMSRQRPNVRVLSS 286
Query: 243 MLMGYTHSGRMREASEFFDAMPVKPVVA----CNEMIMGFGFDGDVDRAKAVFEKMRERD 298
L G + + + + V+ CN ++ +G G + +A+ +F + +
Sbjct: 287 SLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKS 346
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+W++MI Y G ++AL +F M EG+ +
Sbjct: 347 VVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGV 380
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 41/192 (21%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT-PEK 80
T IS Y+ +G I A KV++ + ++H N++++ + +A L P
Sbjct: 223 TAMISFYSSVGLINEAMKVYN-SLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNV 281
Query: 81 NIVS------------W---------------------NGMVSGFVKNGMVAEARRVFDA 107
++S W NG++ + K G + +AR +F A
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRA 341
Query: 108 MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK------NVVSWTVMLGGLLKDSRVE 161
+P ++VVSWTSM+ Y G+ +A +F M E+ N V++ V++ V+
Sbjct: 342 IPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVK 401
Query: 162 DARKLFDMMPVK 173
+ ++ F MM K
Sbjct: 402 EGKECFGMMKEK 413
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 255/528 (48%), Gaps = 55/528 (10%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSW 147
++ ++K G V AR++FD + R+VVSWT+M+ + + G +A LF M ++V +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 148 TVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGG----------YCEEGRLEEARAL 197
G +LK + D L + M + V N G Y G++EEAR
Sbjct: 113 QFTYGSVLKSCK--DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
FD M +R++V+W M+ GY N D + LF++M G+ +
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTE---------------GKKPDCF 215
Query: 258 EFFDAMPVKPVVACNEMI---------MGFGFD--------------GDVDRAKAVFEKM 294
F + VV C E++ +GFG G + A + E
Sbjct: 216 TFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGT 275
Query: 295 RERDDGTWSAMIKVY-ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
++RD + +A+I + ++ +A +F M R ++ G
Sbjct: 276 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 354 RQVHA-RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
RQ+H L S+ D+ + ++LI MY K G++ A F KDV W S+I GY +
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
HG E+A++++ M + P+D++F+ +LSACS++G+ + G +I+++M K+ +E E
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMP--MEPDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
H +C++D+L R+G + +A ++ + + WG+ L ACR H + L++VA +L
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL 515
Query: 531 QLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIK-TRSVIKLPGYSWI 577
+EP+ Y+ L+ +YA+ G W++ R+ +K + S K PGYS +
Sbjct: 516 SMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 153/361 (42%), Gaps = 59/361 (16%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET-------- 76
I Y + G +++ARK+FD R SW AM++ + + A+ LF+
Sbjct: 54 IDLYLKQGDVKHARKLFDRISK--RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKA 111
Query: 77 --------------------------TPEK-----NIVSWNGMVSGFVKNGMVAEARRVF 105
+ EK N++ + ++S + + G + EAR F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARK 165
D+M R++VSW +M+ GY + + LF M + G LL+ S V +
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLE 231
Query: 166 LFDMMP--------VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
+ + + + +++ Y + G L A L + KR++++ T +++G++
Sbjct: 232 IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFS 291
Query: 218 RNRRV-----DVARKLFEVMPERNEVSWTAML-----MGYTHSGRMREASEFFDAMPVKP 267
+ D+ + + + + +EV ++ML + GR +
Sbjct: 292 QQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
V N +I + G+++ A FE+M+E+D +W+++I Y R G +A+ L+ RM+
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 328 E 328
E
Sbjct: 412 E 412
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGL 415
+H + + F +L + LI +Y+K GD+ A+ +F+R +DVV W +MI+ +S+ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 416 GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA 475
+AL +F++M V + ++ VL +C G +KEG +I S++ K + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE-KGNCAGNLIVRS 152
Query: 476 CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
++ L R G++ +A + M E D + W +++
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK--- 142
N ++ + K+G + +A F+ M ++V SWTS++ GY + GN E+A L+ RM +
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 143 -NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA-----VTNMIGGYCEEGRLEEARA 196
N V++ +L + E K++D M K + ++ +I G LEEA A
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 197 LF---DEMPKRNVVTWTTMVSGYARNRRVDVAR----KLFEVMPERNEVSWTAMLMGYTH 249
L + + + TW + R+ V +++ +L + P R V++ + Y
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEP-RKPVNYINLASVYAA 534
Query: 250 SG 251
+G
Sbjct: 535 NG 536
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/610 (26%), Positives = 280/610 (45%), Gaps = 79/610 (12%)
Query: 44 TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARR 103
+P H S N++++ Y + A T+FE ++++S N +++GF NGM EA
Sbjct: 321 SPEAH--VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFG 378
Query: 104 VFDAMP--------VRNVVSWTSM------------VRGYV------------------- 124
+ + M + VVS TS+ V GY
Sbjct: 379 ILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 125 --QEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF---------DMMPVK 173
+ G +AE LF +++VSW M+ ++ A+ LF +
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 174 DVVAVT-------NMIGG---YC---EEGRLEEARALFDEMPK-RNVVTWTTMVSGYARN 219
V+A+ ++I G +C + G L A + M + R++ +W +++SG A +
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 220 RRVDVARKLFEVMPERNEV--SWTAMLMGYTHSGRMREASE--FFDAMPVKPVVAC---- 271
+ + F+ M ++ +L + SG + + F + +K +
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 272 -NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
N +I +G D++ A VF + + + +W+ +I + E LF ++ E
Sbjct: 619 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPN 678
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ F +G Q H L+R F + +V++AL+ MY CG L
Sbjct: 679 EITF---VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSG 449
+F + + WNS+I+ + HG+GE+A+ +F+++ S + P+ SFI +LSACS+SG
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 450 KVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
+ EG ++ M+ K+ V+P EH +VD+LGRAG++ +A E + + A VWG+L
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 510 LGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI 569
L AC H L + E L ++EP NA Y+ L++ Y G WE+ +R+ ++ ++
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 570 KLPGYSWIEV 579
KLPGYS I+V
Sbjct: 916 KLPGYSVIDV 925
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/576 (22%), Positives = 231/576 (40%), Gaps = 91/576 (15%)
Query: 51 TSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM-- 108
+S NA++ Y + A +F ++IVSWN +++ + NG ++ + F +M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 109 ---------------------------------------PVRNVVSWTSMVRGYVQEGNV 129
P +V S++ Y + G+
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD--------VVAVTNM 181
E AE +F + ++V+S +L G + E+A + + M D VV++T++
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 182 IG--GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
G + EGR + EM R + +++ Y + A LF+ R+ VS
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462
Query: 240 WTAMLMGYTHSGRMREASEFFD-------------AMPVKPVVAC---NEMIMGFGFD-- 281
W +M+ ++ +G +A F + + + +C + +I G
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCW 522
Query: 282 ----GDVDRAKAVFEKMRE-RDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL-NFP 335
GD+ A E M E RD +W+++I G LE+L F M REG +
Sbjct: 523 LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY 395
GR H ++S + D + + LITMY +C D+ A +F
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 396 PLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
++ WN +I+ SQ+ G E +FR++ L P++I+F+G+LSA + G G
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGM 699
Query: 456 EIF-ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACR 514
+ ++ +Q P + A +VD+ G + +++ + + W S++ A
Sbjct: 700 QAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHG 756
Query: 515 THMKLDLAEVAVEKLAQL------EPKNAGPYVLLS 544
H + E A+E +L EP + LLS
Sbjct: 757 FH---GMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 153/352 (43%), Gaps = 12/352 (3%)
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-E 230
++D+ + ++ Y G L + LFDE+ +++V+ W +M++ +N R A LF E
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 231 VMPERNEV---SWTAMLMGYTHSGRMREASEF----FDAMPVKPVVACNEMIMGFGFDGD 283
++ + NE + + R+ S + V CN ++ + +
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
+ A+ VF M RD +W+ ++ G ++L F M G +
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVA--SALITMYVKCGDLVRAKWIFNRYPLKDVV 401
G +H +++S + + +V+ +++I+MY KCGD A+ +F +DV+
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 402 MWNSMITGYSQHGLGEEALNVFRDM-CLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
N+++ G++ +G+ EEA + M + + PD + + + S C +EGR +
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
+E ++D+ G+ G A E++ K D + W S++ A
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 192/459 (41%), Gaps = 44/459 (9%)
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM 139
+++ + + +++ + + G + + +FD + ++V+ W SM+ Q G A LF M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 140 PEK-NVVSWTVMLGGLLKDSRVEDARKL-------FDMMPVKDVVAVTNMIGGYCEEGRL 191
K N T +L S + +RK + V D ++ Y + L
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 192 EEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGY 247
A +F M R++V+W T+++ N + + F+ M E + V+++ ++
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 248 THSGRMREASEFFDAM------PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGT 301
+ + + P V N +I + GD + A+ VFE++ RD +
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVIS 359
Query: 302 WSAMIKVYERKGFELEALGLFARMQR-EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
+A++ + G EA G+ +MQ + + GR VH
Sbjct: 360 SNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 361 VRSEF-DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEA 419
VR E + L V +++I MY KCG +A+ +F +D+V WNSMI+ +SQ+G +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 420 LNVFRDMCLSGVPPDDISF---IGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYAC 476
N+F+++ +S S + +L++C S + G+ S+ C Q
Sbjct: 480 KNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGK----SVHCWLQ---------- 524
Query: 477 MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRT 515
+ G + A +E M D W S++ C +
Sbjct: 525 ------KLGDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 12/286 (4%)
Query: 224 VARKLFEVMPERNEVSWTAMLM---GYTHSGRMREASEF--------FDAMPVKPVVACN 272
+ LF+ +PER + + M S MR +E ++ + +
Sbjct: 67 IVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSS 126
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL 332
+++ +G G++ + +F++++E+D W++MI + G + A+GLF M +G
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186
Query: 333 NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF 392
+ +H + + D + +AL+ +Y K +L A+ +F
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVK 452
+D+V WN+++T +G ++L F+ M SG D ++F V+SACS ++
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 453 EGREIFE-SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
G + +K Y E + ++ + + G A + E++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 185/355 (52%), Gaps = 12/355 (3%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
+ VH ++ S DL L+ MY CG A +F + K++ W +I +++
Sbjct: 273 AKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAK 332
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
+G GE+A+++F G PD F G+ AC G V EG FESM Y + P IE
Sbjct: 333 NGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIE 392
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
Y +V++ G +++A+E VE+MPMEP+ VW +L+ R H L+L + E + L
Sbjct: 393 DYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFL 452
Query: 533 EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNN 592
+P + + DVE +E +K RS I L G V+ F GD N
Sbjct: 453 DPTRLNKQSREGFIPV---KASDVE--KESLKKRSGI-LHG-----VKSSMQEFRAGDTN 501
Query: 593 CHPEQPIIMKMLERLDGLLRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKV 652
PE + ++L L + + GY + LHD+++E K L HSE++A A +L
Sbjct: 502 L-PENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNS 560
Query: 653 PEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
P V+KNLRVC DCH+A+K+++ + GRE+I RD RFH K+G C+CKDYW
Sbjct: 561 APRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 240/506 (47%), Gaps = 37/506 (7%)
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV----SWTVMLGGLLK 156
A +F+ + N+ + +M+RGY E A +F ++ K + S+ L +
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 157 DSRVEDARKLFDMMPVKDVVAVTNM----IGGYCEEGRLEEARALFDEMPKR-NVVTWTT 211
+ V L + + T++ I YC G++ +AR +FDEMP+ + VT++T
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 212 MVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV-VA 270
+++GY + + +A LF +M + V + L+ + + S+ D + V
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF-----LSAISDLGDLSGAESAHVL 252
Query: 271 C------------NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA 318
C +I +G G + A+ +F+ +D TW+ MI Y + G E
Sbjct: 253 CIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
+ L +M+ E N GR V L D + +AL+ M
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDM 372
Query: 379 YVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM----CLSGVPPD 434
Y K G L +A IFNR KDV W +MI+GY HGL EA+ +F M C V P+
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENC--KVRPN 430
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
+I+F+ VL+ACS+ G V EG F+ M Y P +EHY C+VDLLGRAGQ+ +A E++
Sbjct: 431 EITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELI 490
Query: 495 EKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
+P+ D+ W +LL ACR + DL E + +LA++ + +LL+ +A G E
Sbjct: 491 RNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE 550
Query: 555 DVEVVREKIKTRSVIKLPGYSWIEVE 580
+ E K R K GYS IE+E
Sbjct: 551 K-SLDNELNKGR---KEAGYSAIEIE 572
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 54/292 (18%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV- 83
I Y G+I +ARKVFDE P +++ ++ Y Q + A+ LF + +V
Sbjct: 167 IHFYCVCGKISDARKVFDEMPQ-SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 84 ------------SWNGMVSG--------------------------FVKNGMVAEARRVF 105
S G +SG + K G ++ ARR+F
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDA-- 163
D ++VV+W M+ Y + G +EE L +M + + + GLL +A
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 164 --RKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA 217
R + D++ D + T ++ Y + G LE+A +F+ M ++V +WT M+SGY
Sbjct: 346 VGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 218 RNRRVDVARKLFEVMPER------NEVSWTAMLMGYTHSGRMREASEFFDAM 263
+ A LF M E NE+++ +L +H G + E F M
Sbjct: 406 AHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 29/266 (10%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVR-NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV 144
N ++ + G +++AR+VFD MP + V++++++ GY+Q A LF M + V
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 145 V-------SWTVMLGGLLKDSRVEDARKLFDMMPVK-DVVAVTNMIGGYCEEGRLEEARA 196
V S+ + L S E A L + + D+ +T +IG Y + G + AR
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 197 LFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAML-------- 244
+FD +++VVTW M+ YA+ ++ L M + N ++ +L
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 245 --MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW 302
+G T + + E DA+ +V +M G +++A +F +M+++D +W
Sbjct: 344 AFVGRTVADLLEEERIALDAILGTALV---DMYAKVGL---LEKAVEIFNRMKDKDVKSW 397
Query: 303 SAMIKVYERKGFELEALGLFARMQRE 328
+AMI Y G EA+ LF +M+ E
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEE 423
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 355 QVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
++H +V++ D+D + S L+ + D+ A IF ++ M+N+MI GYS
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE-SMKCKYQV----EP 469
E A +VF + G+ D SFI L +CS V G + +++ + V
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL----LGACRTHMKLDLAEV 524
+ H+ C+ G+++DA ++ ++MP DA+ + +L L + + LDL +
Sbjct: 165 ALIHFYCV------CGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRI 217
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 275 IMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNF 334
++ F D+ A ++FE + + ++ MI+ Y A +F +++ +G L+
Sbjct: 66 LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDR 125
Query: 335 PXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNR 394
G +H +RS F + +ALI Y CG + A+ +F+
Sbjct: 126 FSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE 185
Query: 395 YPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKE 453
P D V +++++ GY Q AL++FR M S V + + + LSA S G +
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS- 244
Query: 454 GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
G E + K ++ + ++ + G+ G ++ A I + + D + W ++
Sbjct: 245 GAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD-CAIRKDVVTWNCMID-- 301
Query: 514 RTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ K L E V L Q++ + P
Sbjct: 302 -QYAKTGLLEECVWLLRQMKYEKMKP 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 60/284 (21%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAY-----------------FQA 64
T I Y + G I +AR++FD I + +WN M+ Y ++
Sbjct: 266 TALIGMYGKTGGISSARRIFD--CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 65 HQPHQAV------------------TLFETTPEKNI----VSWNGMVSGFVKNGMVAEAR 102
+P+ + T+ + E+ I + +V + K G++ +A
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAV 383
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV------VSWTVMLGGLLK 156
+F+ M ++V SWT+M+ GY G EA LF +M E+N +++ V+L
Sbjct: 384 EIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSH 443
Query: 157 DSRVEDARKLFDMM--------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMP-KRNVV 207
V + + F M V+ V +++G G+LEEA L +P +
Sbjct: 444 GGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG---RAGQLEEAYELIRNLPITSDST 500
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMPERNEVS-WTAMLMGYTHS 250
W +++ D+ + + E E A+L+ TH+
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHA 544
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
A++ Y + A +F+ K++V+WN M+ + K G++ E + M +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 115 SWTSMVRGYVQEGNVEEAE---RLFWRMPEKNVVSWTVMLGGLLKD-----SRVEDARKL 166
+S G + EA R + E+ ++ +LG L D +E A ++
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV------VTWTTMVSGYARNR 220
F+ M KDV + T MI GY G EA LF++M + N +T+ +++ +
Sbjct: 386 FNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGG 445
Query: 221 RVDVARKLFEVM-------PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP-VVACN 272
V + F+ M P+ L+G +G++ EA E +P+ A
Sbjct: 446 LVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG--RAGQLEEAYELIRNLPITSDSTAWR 503
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRE 296
++ G+ D ++V ++ E
Sbjct: 504 ALLAACRVYGNADLGESVMMRLAE 527
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 173/650 (26%), Positives = 292/650 (44%), Gaps = 98/650 (15%)
Query: 21 STGAISRYARIGQIENARKVFDET--PHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP 78
S +S Y R+G + + +K FDE P ++ SW +++A F+ A +F+ P
Sbjct: 95 SNTLLSLYERLGNLASLKKKFDEIDEPDVY----SWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 79 EKNIVS-WNGMVSGFVKNGMVAEARRVFDAM-------------PVRNVVSWTSMVRG-- 122
E++ V+ WN M++G ++G + +F M + ++ + S+ G
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 123 ----------YVQEGNVEEAERLFWR---------------MPEKNVVSWTVMLGGLLKD 157
++ V +++ + ++ V++ V++ GL
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF 270
Query: 158 SRVEDA---RKLFDM-MPVKDVVAVTNMIGGYCEE-GRLEEARALFDEMPKRNVVTWTTM 212
R E RK+ + + D+ V+ M C G A+ K +V+ TM
Sbjct: 271 KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 213 VSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP-- 267
+ Y+ A K+FE + E++ V+W M+ Y + + A + M VKP
Sbjct: 331 -TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 268 ------------------VVAC-------------NEMIMGFGFDGDVDRAKAVFEKMRE 296
V AC N +I + +G +++A +FE+
Sbjct: 390 FTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLR 449
Query: 297 RDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH---G 353
++ +W+A+I + GF E L F+ + E P G
Sbjct: 450 KNLISWNAIISGFYHNGFPFEGLERFSCL-LESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
Q HA ++R ++ + +ALI MY +CG + + +FN+ KDVV WNS+I+ YS+H
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 414 GLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
G GE A+N ++ M G V PD +F VLSACS++G V+EG EIF SM + V ++
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVD 628
Query: 473 HYACMVDLLGRAGQVNDA---VEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
H++C+VDLLGRAG +++A V+I EK + VW +L AC H L L ++ + L
Sbjct: 629 HFSCLVDLLGRAGHLDEAESLVKISEK-TIGSRVDVWWALFSACAAHGDLKLGKMVAKLL 687
Query: 530 AQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEV 579
+ E + YV LS++YA G W++ E R I +K G SW+ +
Sbjct: 688 MEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 215/438 (49%), Gaps = 80/438 (18%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
N ++ +VK+ V AR+VFD + R W M+ GY + GN EEA +LF MPE +VV
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRN 205
SWTVM+ G K +E+ARK FD MP K VV+ M+ GY + G E+A LF++M +
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 206 V----VTWTTMVSG-----------------------------------YARNRRVDVAR 226
V TW ++S +A+ R + AR
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 227 KLF-EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVD 285
++F E+ +RN V+W AM+ GYT G M A + FD MP + VV+ N +I G+ +G
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 286 RAKAVFEKMRERDDGTWS--AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
A FE M + D MI V L A G A ++ +
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISV-------LSACGHMADLELGDCIV----------- 421
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMW 403
D+ R+ +L S + +LI MY + G+L AK +F+ +DVV +
Sbjct: 422 -------DYIRKNQIKLNDSGY-------RSLIFMYARGGNLWEAKRVFDEMKERDVVSY 467
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
N++ T ++ +G G E LN+ M G+ PD +++ VL+AC+ +G +KEG+ IF+S++
Sbjct: 468 NTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR- 526
Query: 464 KYQVEPGIEHYACMVDLL 481
P +HYACM DLL
Sbjct: 527 ----NPLADHYACM-DLL 539
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 176/351 (50%), Gaps = 51/351 (14%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNG 87
Y + +E+ARKVFD+ R S WN M++ Y++ +A LF+ PE ++VSW
Sbjct: 146 YVKHESVESARKVFDQISQ--RKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKN 143
M++GF K + AR+ FD MP ++VVSW +M+ GY Q G E+A RLF M N
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFD 199
+W +++ + R L ++ K V T ++ + + ++ AR +F+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 200 EM-PKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASE 258
E+ +RN+VTW M+SGY R + AR+LF+ MP+RN VSW +++ GY H+G+ A E
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 259 FFDAM----PVKP--------VVACNEM----------------------------IMGF 278
FF+ M KP + AC M I +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 279 GFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
G++ AK VF++M+ERD +++ + + G +E L L ++M+ EG
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 213/468 (45%), Gaps = 33/468 (7%)
Query: 63 QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAE--ARRVFDAMPVRNVVSWTSMV 120
Q +Q H + +F + P ++ W + R +FD++ NV SM
Sbjct: 21 QLNQIHAQLIVFNSLPRQSY--WASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMF 78
Query: 121 RGYVQEGNVEEAERLFWR------MPEKNVVSWTVMLG-----GLLKDSRVEDARKLFDM 169
+ + + + RL+ + MP+ S+ V++ G+L + VE F
Sbjct: 79 KYFSKMDMANDVLRLYEQRSRCGIMPD--AFSFPVVIKSAGRFGILFQALVEKL-GFFKD 135
Query: 170 MPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF 229
V++V+ + Y + +E AR +FD++ +R W M+SGY + + A KLF
Sbjct: 136 PYVRNVI-----MDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 230 EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKA 289
++MPE + VSWT M+ G+ + A ++FD MP K VV+ N M+ G+ +G + A
Sbjct: 191 DMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALR 250
Query: 290 VFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
+F M ++ TW +I + L + + LN
Sbjct: 251 LFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA 310
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNS 405
R++ L ++L +A+I+ Y + GD+ A+ +F+ P ++VV WNS
Sbjct: 311 KCRDIQSARRIFNELGTQ---RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 406 MITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSGKVKEGREIFESMKCK 464
+I GY+ +G A+ F DM G PD+++ I VLSAC + ++ G I + ++ K
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-K 426
Query: 465 YQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA 512
Q++ Y ++ + R G + +A + ++M E D + + +L A
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTA 473
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 149/340 (43%), Gaps = 88/340 (25%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT---- 77
T I+ +A++ +ENARK FD P ++ SWNAM++ Y Q A+ LF
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMP--EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 78 PEKNIVSWNGMVSG--------------------------FVKNGM---------VAEAR 102
N +W ++S FVK + + AR
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 103 RVFDAMPV-RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
R+F+ + RN+V+W +M+ GY + G++ A +LF MP++NVVSW ++ G + +
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 162 DARKLF-DMMPVKD-------VVAVTNMIGG----------------------------- 184
A + F DM+ D +++V + G
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSL 439
Query: 185 ---YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARN----RRVDVARKLFEVMPERNE 237
Y G L EA+ +FDEM +R+VV++ T+ + +A N +++ K+ + E +
Sbjct: 440 IFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDR 499
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAM--PVKPVVACNEMI 275
V++T++L +G ++E F ++ P+ AC +++
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACMDLL 539
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE---- 75
T IS Y RIG + +AR++FD P R SWN+++A Y Q A+ FE
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMP--KRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 76 ---TTPE----------------------------KNIVSWN-----GMVSGFVKNGMVA 99
+ P+ KN + N ++ + + G +
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 100 EARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLL 155
EA+RVFD M R+VVS+ ++ + G+ E L +M ++ + V++T +L
Sbjct: 451 EAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN 510
Query: 156 KDSRVEDARKLFDMM--PVKDVVAVTNMI 182
+ +++ +++F + P+ D A +++
Sbjct: 511 RAGLLKEGQRIFKSIRNPLADHYACMDLL 539
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 247/513 (48%), Gaps = 23/513 (4%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQ-EGNVEEAERL----FWRMP 140
N ++ + K +A ++FD MP+RN+V+W ++ G +Q +G+ L R+
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 141 EKNVVSWTVMLGGLLK---DSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLE 192
+V V GL++ DS A + VK T+++ Y + G +
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 193 EARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM-PERNEV-----SWTAMLMG 246
EAR +F+ + R++V W +VS Y N +D A L ++M ++N +++++L
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 247 -YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAM 305
G+ A F + VA + M + + A+ FE M R+ +W+AM
Sbjct: 255 CRIEQGKQIHAILFKVSYQFDIPVATALLNM-YAKSNHLSDARECFESMVVRNVVSWNAM 313
Query: 306 IKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF 365
I + + G EA+ LF +M E + +QV A + +
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS 373
Query: 366 DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRD 425
L VA++LI+ Y + G+L A F+ D+V W S+I + HG EE+L +F
Sbjct: 374 ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M L + PD I+F+ VLSACS+ G V+EG F+ M Y++E EHY C++DLLGRAG
Sbjct: 434 M-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 486 QVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSH 545
+++A +++ MP EP + G C H K + + +KL ++EP Y +LS+
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSN 552
Query: 546 MYASKGRWEDVEVVREKIKTRSVI-KLPGYSWI 577
Y S+G W ++R++ + K PG SW+
Sbjct: 553 AYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 62/360 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQ-----AHQPHQAVTLFE---- 75
+ Y +I + ++A K+FDE P R +WN ++ Q H+ H
Sbjct: 78 LQAYTKIREFDDADKLFDEMP--LRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF 135
Query: 76 TTPEKNIVSWNG-----------------------------------MVSGFVKNGMVAE 100
T + VS+ G +V + K G++ E
Sbjct: 136 TDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE 195
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-PEKNVVSWTVM-LGGLLKDS 158
ARRVF+A+ R++V W ++V YV G ++EA L M +KN LL
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 159 RVEDARK----LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
R+E ++ LF + D+ T ++ Y + L +AR F+ M RNVV+W M+
Sbjct: 256 RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 215 GYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAMPVKP--- 267
G+A+N A +LF M N E+++ ++L + E + AM K
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ-VQAMVTKKGSA 374
Query: 268 --VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARM 325
+ N +I + +G++ A F +RE D +W+++I GF E+L +F M
Sbjct: 375 DFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM 434
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 63/331 (19%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF------------------ 62
ST + Y + G I AR+VF+ + R WNA+V++Y
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAV--LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSD 237
Query: 63 ---------------------QAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEA 101
Q Q H LF+ + + +I +++ + K+ +++A
Sbjct: 238 KNRFRGDYFTFSSLLSACRIEQGKQIH--AILFKVSYQFDIPVATALLNMYAKSNHLSDA 295
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKD 157
R F++M VRNVVSW +M+ G+ Q G EA RLF +M +N+ +++ +L K
Sbjct: 296 RECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKF 355
Query: 158 SRVEDARKLFDMMPVK---DVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
S + + +++ M+ K D ++V N +I Y G L EA F + + ++V+WT+++
Sbjct: 356 SAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVI 415
Query: 214 SGYARNRRVDVARKLFEVMPER---NEVSWTAMLMGYTHSGRMREA-------SEFFDAM 263
A + + + ++FE M ++ +++++ +L +H G ++E +EF+
Sbjct: 416 GALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
C +I G G +D A V M
Sbjct: 476 AEDEHYTC--LIDLLGRAGFIDEASDVLNSM 504
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 126/298 (42%), Gaps = 26/298 (8%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
+T ++ YA+ + +AR+ F+ + R SWNAM+ + Q + +A+ LF +
Sbjct: 279 ATALLNMYAKSNHLSDARECFESM--VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 81 NI----VSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSW----TSMVRGYVQEGNVEEA 132
N+ +++ ++S K + E ++V + + + S++ Y + GN+ EA
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK---DVVAVTNMIGGYCEEG 189
F + E ++VSWT ++G L E++ ++F+ M K D + ++ G
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGG 456
Query: 190 RLEEARALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAML 244
++E F M + + +T ++ R +D A + MP A
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAF 516
Query: 245 MGYTHSGRMRE-----ASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
G + RE A + + P KPV N I+ + + +A + RER
Sbjct: 517 TGGCNIHEKRESMKWGAKKLLEIEPTKPV---NYSILSNAYVSEGHWNQAALLRKRER 571
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+Q H +V+ L++ + L+ Y K + A +F+ PL+++V WN +I G Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 414 GLGEEALNVFRDMC------LSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
G+ C + V D +SF+G++ C+ S +K G ++ + K +
Sbjct: 116 D-GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL-HCLMVKQGL 173
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
E +V G+ G + +A + E + ++ D ++W +L+ + + +D A ++
Sbjct: 174 ESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 528 KLAQLEPKNAGPYVLLSHMYAS 549
+ + + G Y S + ++
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSA 254
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 209/401 (52%), Gaps = 17/401 (4%)
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNV--VTWTTMVSGYARNRRVDVARKLF------E 230
+ ++ Y G E A +FD M KR+ W +++SGYA + + A L+
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 231 VMPERNEVSWTAMLMGYTHSGRMREA--SEFFDAMPVKPVVACNEMIMGFGFDGDVDRAK 288
V P+R G S ++ EA + V N +++ + GD+ +A+
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 289 AVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXX 348
VF+ + +D +W++M+ Y G EAL +F M + G P
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE---PDKVAISSVLARVL 307
Query: 349 XXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMIT 408
HGRQ+H ++R + +L VA+ALI +Y K G L +A +IF++ +D V WN++I+
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
+S++ G L F M + PD I+F+ VLS C+ +G V++G +F M +Y ++
Sbjct: 368 AHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 469 PGIEHYACMVDLLGRAGQVNDAVE-IVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVE 527
P +EHYACMV+L GRAG + +A IV++M +E VWG+LL AC H D+ EVA +
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ 484
Query: 528 KLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
+L +LEP N + LL +Y+ R EDVE VR+ + R +
Sbjct: 485 RLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 147/345 (42%), Gaps = 66/345 (19%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK 80
S+ + YA G E A +VFD + +WN++++ Y + Q A+ L+ E
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 81 ---------------------------------------NIVSWNGMVSGFVKNGMVAEA 101
++ N +V + K G + +A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 102 RRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRV- 160
R VFD +P ++ VSW SM+ GY+ G + EA +F M + + V + +L +RV
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL--ARVL 307
Query: 161 --EDARKLFDMMPVKDV---VAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ R+L + + + ++V N +I Y + G+L +A +FD+M +R+ V+W ++S
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 215 GYARNRRVDVARKLFEVMPERNE----VSWTAMLMGYTHSGRMREASEFFDAM------- 263
+++N K FE M N +++ ++L ++G + + F M
Sbjct: 368 AHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 264 PVKPVVACNEMIMGFGFDGDVDRAKA--VFEKMRERDDGTWSAMI 306
P AC M+ +G G ++ A + V E E W A++
Sbjct: 425 PKMEHYAC--MVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 22/260 (8%)
Query: 88 MVSGFVKNGMVAEARRVFDAMPVRNV--VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV 145
+V + G A VFD M R+ +W S++ GY + G E+A L+++M E V
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK 192
Query: 146 SWTVMLGGLLK------DSRVEDA--RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARAL 197
+LK ++ +A R L DV + ++ Y + G + +AR +
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PERNEVSWT-AMLMGYTHS 250
FD +P ++ V+W +M++GY + + A +F +M P++ +S A ++ + H
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH- 311
Query: 251 GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE 310
GR M + VA N +I+ + G + +A +F++M ERD +W+A+I +
Sbjct: 312 GRQLHGWVIRRGMEWELSVA-NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS 370
Query: 311 RKGFELEALGLFARMQREGA 330
+ L F +M R A
Sbjct: 371 KNS---NGLKYFEQMHRANA 387
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV--VMWNSMIT 408
DHG +VH + +L ++S L+ +Y CG A +F+R +D WNS+I+
Sbjct: 109 DHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLIS 168
Query: 409 GYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVE 468
GY++ G E+A+ ++ M GV PD +F VL AC G V+ G I + V+
Sbjct: 169 GYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL-----VK 223
Query: 469 PGIEH----YACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTH 516
G + +V + + G + A + + +P D + W S+L H
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYVSWNSMLTGYLHH 274
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 5/344 (1%)
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERD 298
+ ++ Y+ + A + FD P + VV N +I G ++ RA+ +F+ M RD
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+W+++I Y + EA+ LF M G + G+ +H
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD 273
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEE 418
R D ++A+ L+ Y KCG + A IF K + WN+MITG + HG GE
Sbjct: 274 YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
++ FR M SG+ PD ++FI VL CS+SG V E R +F+ M+ Y V ++HY CM
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA 393
Query: 479 DLLGRAGQVNDAVEIVEKMPME----PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP 534
DLLGRAG + +A E++E+MP + + W LLG CR H +++AE A ++ L P
Sbjct: 394 DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSP 453
Query: 535 KNAGPYVLLSHMYASKGRWEDVEVVREKI-KTRSVIKLPGYSWI 577
++ G Y ++ MYA+ RWE+V VRE I + + V K G+S +
Sbjct: 454 EDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 40/290 (13%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRN 112
+ N ++ Y A+ LF+ P++++V++N ++ G VK + AR +FD+MP+R+
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 113 VVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV 172
+VSW S++ GY Q + EA +LF M V LG + P
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEM---------VALG----------------LKP- 247
Query: 173 KDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG----YARNRRVDVARKL 228
D VA+ + + + G ++ +A+ D ++ + + + +G YA+ +D A ++
Sbjct: 248 -DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 229 FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAM---PVKPV-VACNEMIMGFGFDGDV 284
FE+ ++ +W AM+ G G ++F M +KP V +++G G V
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 285 DRAKAVFEKMR-----ERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
D A+ +F++MR R+ + M + R G EA + +M ++G
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 149/317 (47%), Gaps = 31/317 (9%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE 79
T I Y+ I I++A ++FDE P R ++N ++ +A + +A LF++ P
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQ--RDVVTYNVLIDGLVKAREIVRARELFDSMPL 211
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERL 135
+++VSWN ++SG+ + EA ++FD M + V+ S + Q G+ ++ + +
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 136 FWRMPEKNVVSWTVMLGGLL----KDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRL 191
K + + + GL+ K ++ A ++F++ K + MI G G
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 192 EEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-------W 240
E F +M + VT+ +++ G + + VD AR LF+ M +V+
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGC 391
Query: 241 TAMLMGYTHSGRMREASEFFDAMPV-----KPVVACNEMIMGFGFDGDVDRAKAVFEKMR 295
A L+G +G + EA+E + MP + ++A + ++ G G+++ A+ +++
Sbjct: 392 MADLLG--RAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Query: 296 E---RDDGTWSAMIKVY 309
D G + M+++Y
Sbjct: 450 ALSPEDGGVYKVMVEMY 466
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 196/397 (49%), Gaps = 17/397 (4%)
Query: 311 RKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLY 370
R+G +A+ + + EG ++ P + VH + S D+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG 430
+++I MY CG + A +FN P +++ W +I ++++G GE+A++ F G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 431 VPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDA 490
PD F + AC G + EG FESM +Y + P +EHY +V +L G +++A
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 491 VEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASK 550
+ VE M EP+ +W +L+ R H L L + + + QL+ L A
Sbjct: 338 LRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASR-----LNKESKAGL 390
Query: 551 GRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGL 610
+ ++V+EK++ + K P Y ++ + PE + L+ L
Sbjct: 391 VPVKSSDLVKEKLQR--MAKGPNYGI--------RYMAAGDISRPENRELYMALKSLKEH 440
Query: 611 LRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDC 670
+ + GY P LHDV++E K +L H+E+ A L P IRVMKNLRVC DC
Sbjct: 441 MIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADC 500
Query: 671 HSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
H+A+KL++K+ GRE+I RDA RFHH KDG CSC++YW
Sbjct: 501 HNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPE--KNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR 111
W A + QA Q + V F T+ +I ++N ++ + G V +A VF++MP R
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRM------PEKNVVSWTVMLGGLLKDSR-----V 160
N+ +W ++R + + G E+A F R P+ + G+L D
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 161 EDARKLFDMMP-VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
E K + ++P ++ V++ M+ E G L+EA + M + NV W T+++
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLA---EPGYLDEALRFVESM-EPNVDLWETLMN 356
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/560 (25%), Positives = 247/560 (44%), Gaps = 63/560 (11%)
Query: 84 SWNGMVSGFVKNGMVAEARRVF---------DAMPVRNVVSWTSMVRGYVQEGNVEEAER 134
SW+ +V + G + R DA P+ ++R G V +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPL------VHLLRVSGNYGYVSLCRQ 76
Query: 135 LFWRMPEKNVVSWTVMLGGLLK----DSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGR 190
L + + VS T + L++ +EDA K+FD MP DV++ +++ GY + GR
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 191 LEEARALFDEM----------------------------------------PKRNVVTWT 210
+E LF E+ K NVV
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 211 TMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
++ Y + +D A +F+ M E++ VSW A++ + +G++ FF MP V
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT 256
Query: 271 CNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
NE+I F GD + A V M + +W+ ++ Y EA F +M G
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGV 316
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
+ G +HA + D + VASALI MY KCG L A+
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAEL 376
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSG-VPPDDISFIGVLSACSYSG 449
+F P K++++WN MI+GY+++G EA+ +F + + PD +F+ +L+ CS+
Sbjct: 377 MFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436
Query: 450 KVKE-GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGS 508
E FE M +Y+++P +EH ++ +G+ G+V A +++++ D + W +
Sbjct: 437 VPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496
Query: 509 LLGACRTHMKLDLAEVAVEKLAQL--EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
LLGAC L A+ K+ +L K+ Y+++S++YA RW +V +R+ ++
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556
Query: 567 SVIKLPGYSWIEVEKKAHMF 586
V+K G SWI+ K +
Sbjct: 557 GVLKEVGSSWIDSRTKCSSY 576
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 24/344 (6%)
Query: 3 YGYSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF 62
+GY T + R S + Y +E+A KVFDE P SWN++V+ Y
Sbjct: 78 HGYVTKHGFVSNTRL---SNSLMRFYKTSDSLEDAHKVFDEMPD--PDVISWNSLVSGYV 132
Query: 63 QAHQPHQAVTLFETTPEKNIV----SWNGMVSGFVKN-----GMVAEARRVFDAMPVRNV 113
Q+ + + + LF ++ S+ ++ + G ++ V + NV
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 114 VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK 173
V ++ Y + G +++A +F M EK+ VSW ++ ++ ++E F MP
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
D V +I + + G A + +MP N +W T+++GY + + A + F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 234 ER----NEVSWTAMLMGYTHS-----GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV 284
+E S + +L G + A + + VVA + +I + G +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA-SALIDMYSKCGML 371
Query: 285 DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQRE 328
A+ +F M ++ W+ MI Y R G +EA+ LF ++++E
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 265/567 (46%), Gaps = 42/567 (7%)
Query: 57 MVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV--- 113
+V Y + +A T+ E + + + WN ++ +++N E+ V+ M + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 114 -VSWTSMVR----------GYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
++ S+++ G V G++E + N+ ++ + +V+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSH------RCNLYVCNALISMYKRFGKVDV 237
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSGYAR 218
AR+LFD M +D V+ +I Y E +L EA L D M + ++VTW T+ G
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 219 NRRVDVARKLFEVMPERN-EVSWTAMLMGY---THSGRMREASEFFDAMPVKPVVAC--- 271
A M N + AM+ G +H G ++ + F + ++
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFSHDI 356
Query: 272 ----NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
N +I + D+ A VF+++ TW+++I + E L M
Sbjct: 357 DNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD-LYVASALITMYVKCGDLV 386
G N HG++ H ++R + +D L + ++L+ MY K G+++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
AK +F+ +D V + S+I GY + G GE AL F+DM SG+ PD ++ + VLSACS
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 447 YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW 506
+S V+EG +F M+ + + +EHY+CMVDL RAG ++ A +I +P EP + +
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC 596
Query: 507 GSLLGACRTHMKLDLAEVAVEK-LAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKT 565
+LL AC H ++ E A +K L + +P++ G Y+LL+ MYA G W + V+ +
Sbjct: 597 ATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Query: 566 RSVIKLPGYSWIEVEKKAHMFVGGDNN 592
V K ++ +E + + + G+NN
Sbjct: 657 LGVQKAHEFALMETDSE----LDGENN 679
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 173/413 (41%), Gaps = 53/413 (12%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR----VDVARKLF 229
D V V ++ Y L+EA+ + + + + W ++ Y RN+R V V +++
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 230 EVMPERNEVSW------TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGD 283
+E ++ A L+ + + GR+ S + V CN +I + G
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAY-GRVVHGSIEVSSHRCNLYV-CNALISMYKRFGK 234
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG-------------- 329
VD A+ +F++M ERD +W+A+I Y + EA L RM G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 330 --------AAL-------NFPXXXXXXXXXXXXXXXDH------GRQVHARLVRS-EFDQ 367
AL N H G+ H ++RS F
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 368 DL-YVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
D+ V ++LITMY +C DL A +F + + WNS+I+G++ + EE + ++M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
LSG P+ I+ +L + G ++ G+E + + + + + +VD+ ++G+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 487 VNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ A + + M + D + + SL+ + +L EVA+ ++ P
Sbjct: 475 IIAAKRVFDSM-RKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMDRSGIKP 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 30/369 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
NA+++ Y + + A LF+ E++ VSWN +++ + + EA ++ D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-VSWTVMLGGLLKDSRVEDAR--KLF 167
++V+W ++ G ++ GN A M NV + M+ GL S + + K+F
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 168 DMMPVK------DVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
+ ++ D+ V N +I Y L A +F ++ ++ TW +++SG+A N
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 221 RVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP-----VVAC 271
R + L + M N ++ ++L + G ++ EF + + ++
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
N ++ + G++ AK VF+ MR+RD T++++I Y R G AL F M R G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE--FDQDLYVA--SALITMYVKCGDLVR 387
P + R+ H + E F L + S ++ +Y + G L +
Sbjct: 523 ---PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 388 AKWIFNRYP 396
A+ IF+ P
Sbjct: 580 ARDIFHTIP 588
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+Q+HA + S + D + L+T Y L A+ I + + WN +I Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS-----YSGKVKEGREIFESMKCKYQV 467
+ +E+++V++ M G+ D+ ++ V+ AC+ G+V G S +C
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL-- 219
Query: 468 EPGIEHYAC--MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
Y C ++ + R G+V+ A + ++M E DA+ W +++ + KL
Sbjct: 220 ------YVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEEKL 266
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 265/567 (46%), Gaps = 42/567 (7%)
Query: 57 MVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV--- 113
+V Y + +A T+ E + + + WN ++ +++N E+ V+ M + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 114 -VSWTSMVR----------GYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVED 162
++ S+++ G V G++E + N+ ++ + +V+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSH------RCNLYVCNALISMYKRFGKVDV 237
Query: 163 ARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM----PKRNVVTWTTMVSGYAR 218
AR+LFD M +D V+ +I Y E +L EA L D M + ++VTW T+ G
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 219 NRRVDVARKLFEVMPERN-EVSWTAMLMGY---THSGRMREASEFFDAMPVKPVVAC--- 271
A M N + AM+ G +H G ++ + F + ++
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIRSCSFSHDI 356
Query: 272 ----NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
N +I + D+ A VF+++ TW+++I + E L M
Sbjct: 357 DNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD-LYVASALITMYVKCGDLV 386
G N HG++ H ++R + +D L + ++L+ MY K G+++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
AK +F+ +D V + S+I GY + G GE AL F+DM SG+ PD ++ + VLSACS
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 447 YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVW 506
+S V+EG +F M+ + + +EHY+CMVDL RAG ++ A +I +P EP + +
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC 596
Query: 507 GSLLGACRTHMKLDLAEVAVEK-LAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKT 565
+LL AC H ++ E A +K L + +P++ G Y+LL+ MYA G W + V+ +
Sbjct: 597 ATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Query: 566 RSVIKLPGYSWIEVEKKAHMFVGGDNN 592
V K ++ +E + + + G+NN
Sbjct: 657 LGVQKAHEFALMETDSE----LDGENN 679
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 173/413 (41%), Gaps = 53/413 (12%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRR----VDVARKLF 229
D V V ++ Y L+EA+ + + + + W ++ Y RN+R V V +++
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 230 EVMPERNEVSW------TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGD 283
+E ++ A L+ + + GR+ S + V CN +I + G
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAY-GRVVHGSIEVSSHRCNLYV-CNALISMYKRFGK 234
Query: 284 VDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG-------------- 329
VD A+ +F++M ERD +W+A+I Y + EA L RM G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 330 --------AAL-------NFPXXXXXXXXXXXXXXXDH------GRQVHARLVRS-EFDQ 367
AL N H G+ H ++RS F
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 368 DL-YVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
D+ V ++LITMY +C DL A +F + + WNS+I+G++ + EE + ++M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
LSG P+ I+ +L + G ++ G+E + + + + + +VD+ ++G+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 487 VNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 539
+ A + + M + D + + SL+ + +L EVA+ ++ P
Sbjct: 475 IIAAKRVFDSM-RKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMDRSGIKP 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 30/369 (8%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
NA+++ Y + + A LF+ E++ VSWN +++ + + EA ++ D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-VSWTVMLGGLLKDSRVEDAR--KLF 167
++V+W ++ G ++ GN A M NV + M+ GL S + + K+F
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 168 DMMPVK------DVVAVTN-MIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNR 220
+ ++ D+ V N +I Y L A +F ++ ++ TW +++SG+A N
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 221 RVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP-----VVAC 271
R + L + M N ++ ++L + G ++ EF + + ++
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
N ++ + G++ AK VF+ MR+RD T++++I Y R G AL F M R G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE--FDQDLYVA--SALITMYVKCGDLVR 387
P + R+ H + E F L + S ++ +Y + G L +
Sbjct: 523 ---PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 388 AKWIFNRYP 396
A+ IF+ P
Sbjct: 580 ARDIFHTIP 588
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+Q+HA + S + D + L+T Y L A+ I + + WN +I Y +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS-----YSGKVKEGREIFESMKCKYQV 467
+ +E+++V++ M G+ D+ ++ V+ AC+ G+V G S +C
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL-- 219
Query: 468 EPGIEHYAC--MVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
Y C ++ + R G+V+ A + ++M E DA+ W +++ + KL
Sbjct: 220 ------YVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEEKL 266
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 205/409 (50%), Gaps = 13/409 (3%)
Query: 180 NMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPER 235
+I Y G + + ALF M +V +T+ +++ + V L +R
Sbjct: 56 TLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKR 115
Query: 236 ----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF 291
+ T+ + Y G + + + FD + VVACN ++ G +G++D A F
Sbjct: 116 GFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYF 175
Query: 292 EKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
++M D +W+ +I + +KG +AL +F M + A+ P D
Sbjct: 176 QRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFD 235
Query: 352 HG-----RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSM 406
G +Q+H ++ E + +AL+ MY K GDL A IF++ K V WN++
Sbjct: 236 QGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAI 295
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
I+ + +G ++AL +F M S V P+ I+ + +L+AC+ S V G ++F S+ +Y+
Sbjct: 296 ISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYK 355
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAV 526
+ P EHY C+VDL+GRAG + DA ++ +P EPDA V G+LLGAC+ H +L
Sbjct: 356 IIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVG 415
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYS 575
++L L+P++ G YV LS A W + E +R+ + + K+P YS
Sbjct: 416 KQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 52/263 (19%)
Query: 116 WTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDS----RVEDARKLFDMMP 171
+ +++R Y+ G + + LF M +V + L+K + V L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 172 VK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARK 227
+ D T+ + Y E G LE +R +FD++ VV +++ RN +D A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMREASEFF--------------DAMPVKPVVACNE 273
F+ MP + VSWT ++ G++ G +A F +A V + +C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 274 MIMG------------------------------FGFDGDVDRAKAVFEKMRERDDGTWS 303
G +G GD++ A +F+++R++ W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 304 AMIKVYERKGFELEALGLFARMQ 326
A+I G +AL +F M+
Sbjct: 294 AIISALASNGRPKQALEMFEMMK 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA 132
+F+ +V+ N ++ +NG + A F MPV +VVSWT+++ G+ ++G +A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 133 ERLFWRMPEK-------NVVSWTVMLGGL--LKDSRVEDARKLFDMMPVKDVVAVTNMIG 183
+F M + N ++ +L + +++ + K+++ T +
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 184 G----YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER---- 235
Y + G LE A +FD++ + V W ++S A N R A ++FE+M
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAM 263
N ++ A+L S + + F ++
Sbjct: 323 NGITLLAILTACARSKLVDLGIQLFSSI 350
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 188/342 (54%), Gaps = 5/342 (1%)
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
TA++ Y G M +A + FD MP + V N MI G GD ++A EKM R
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 301 TWSAMIKVYERKGFELEALGLFARMQR-EGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
+W+ +I Y R EA+ LF+RM + N VHA
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 360 LVRSEF-DQDLYVASALITMYVKCGDLVRAKWIFNRYP--LKDVVMWNSMITGYSQHGLG 416
+ + F D+ V ++LI Y KCG + A F P K++V W +MI+ ++ HG+G
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEG-REIFESMKCKYQVEPGIEHYA 475
+EA+++F+DM G+ P+ ++ I VL+ACS+ G +E E F +M +Y++ P ++HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 476 CMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPK 535
C+VD+L R G++ +A +I ++P+E A+VW LLGAC + +LAE KL +LE
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 536 NAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
+ G YVL+S+++ GR+ D + R+++ R V KLPG+S +
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 21/228 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
A+V Y A +F+ PE+N V+WN M++G G +A + MP R VV
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS---WTVM--------LGGLLKDSRVEDA 163
SWT+++ GY + +EA LF RM + + T++ LG L V
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 164 RKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMP--KRNVVTWTTMVSGYARNRR 221
+P D+ ++I Y + G ++ A F E+P ++N+V+WTTM+S +A +
Sbjct: 282 VGKRGFVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGM 340
Query: 222 VDVARKLFEVMPER-----NEVSWTAMLMGYTHSGRMREAS-EFFDAM 263
A +F+ M ER N V+ ++L +H G E EFF+ M
Sbjct: 341 GKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDE 200
E +V T ++G L + DA K+FD MP ++ V MI G G E+A ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 201 MPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP-----ERNEVSWTAMLMGYTHSGRMRE 255
MP R VV+WTT++ GYAR + A LF M + NE++ A+L + G ++
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 256 ASEFFDAMPVKPVVAC-----NEMIMGFGFDGDVDRAKAVFEKMRE--RDDGTWSAMIKV 308
+ + V C N +I + G + A F ++ ++ +W+ MI
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 309 YERKGFELEALGLFARMQREGAALN 333
+ G EA+ +F M+R G N
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPN 359
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 57/279 (20%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
T + Y G + +A KVFDE P R +WN M+ +A+ E P +
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPE--RNPVTWNVMITGLTNLGDFEKALCFLEKMPNRT 219
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVS-------------W------------ 116
+VSW ++ G+ + EA +F M + + W
Sbjct: 220 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 279
Query: 117 ----------------TSMVRGYVQEGNVEEAERLFWRMPE--KNVVSWTVMLGGLLKDS 158
S++ Y + G ++ A + F +P KN+VSWT M+
Sbjct: 280 AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHG 339
Query: 159 RVEDARKLFDMM------PVK-DVVAVTNMI--GGYCEEGRLEEARALFDEMP-KRNVVT 208
++A +F M P + +++V N GG EE LE + +E +V
Sbjct: 340 MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH 399
Query: 209 WTTMVSGYARNRRVDVARKL-FEVMPERNEVSWTAMLMG 246
+ +V R R++ A K+ E+ E V W ML+G
Sbjct: 400 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWR-MLLG 437
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 21 STGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP-- 78
+ I YA+ G I++A K F E P+ + SW M++A+ +AV++F+
Sbjct: 295 TNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERL 354
Query: 79 --EKNIVSWNGMVSGFVKNGMVAEA-RRVFDAMP-----VRNVVSWTSMVRGYVQEGNVE 130
+ N V+ +++ G+ E F+ M +V + +V ++G +E
Sbjct: 355 GLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLE 414
Query: 131 EAERLFWRMP-EKNVVSWTVMLGG--LLKDSRVED--ARKLFDMMPVK--DVVAVTNMIG 183
EAE++ +P E+ V W ++LG + D+ + + RKL ++ D V ++N+
Sbjct: 415 EAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNI-- 472
Query: 184 GYCEEGRLEEARALFDEMPKRNV 206
+C GR +A+ +M R V
Sbjct: 473 -FCGTGRFLDAQRFRKQMDVRGV 494
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFR 424
F+ +YV +AL+ MY+ G+++ A +F+ P ++ V WN MITG + G E+AL
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 425 DM--------------------------------CLSGVPPDDISFIGVLSACSYSGKVK 452
M + P++I+ + +L A G +K
Sbjct: 214 KMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLK 273
Query: 453 EGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM-EPDAIVWGSLLG 511
+ + + V I ++D + G + A + ++P + + W +++
Sbjct: 274 MCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 512 ACRTH 516
A H
Sbjct: 334 AFAIH 338
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 178/315 (56%), Gaps = 7/315 (2%)
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
A+ VF+++ + D W ++ Y R G E L +F M +G +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 347 XXXXDHGRQVHARLVR-SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNS 405
G+ +H + + S + D++V +AL+ MY KCG + A +F + ++V W +
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 406 MITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCK 464
+I GY+ +G ++A+ + G+ PD + +GVL+AC++ G ++EGR + E+M+ +
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 465 YQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEV 524
Y++ P EHY+C+VDL+ RAG+++DA+ ++EKMPM+P A VWG+LL CRTH ++L E+
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 525 AVEKLAQLEPKNA----GPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVE 580
AV+ L LE N V LS++Y S R + VR I+ R V K PG+S +EV+
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 581 KKAHMFVGGDNNCHP 595
FV GD + HP
Sbjct: 471 GNVTKFVSGDVS-HP 484
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 5/266 (1%)
Query: 287 AKAVFEKMRERDDGTWSAMIKVYERKG---FELEALGLFARMQREGAALNFPXXXXXXXX 343
A ++F+ + + + MI++ R L L + + E A ++
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 344 XXXXXXXDHGRQVHARLVRSE-FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
G+Q+H +V++ F D +V + ++ +YV+ L+ A+ +F+ P DVV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
W+ ++ GY + GLG E L VFR+M + G+ PD+ S L+AC+ G + +G+ I E +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
K +E + +VD+ + G + AVE+ +K+ + W +L+G + A
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR-NVFSWAALIGGYAAYGYAKKA 304
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYA 548
+E+L + + VLL + A
Sbjct: 305 MTCLERLEREDGIKPDSVVLLGVLAA 330
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 32/300 (10%)
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
K + W V G L DS V+ T ++ Y E+ L +AR +FDE+
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQ-----------------TGVLRIYVEDKLLLDARKVFDEI 178
Query: 202 PKRNVVTWTTMVSGYAR----NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
P+ +VV W +++GY R + ++V R++ E +E S T L G + +
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238
Query: 258 EFFDAMPVKP-----VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK 312
+ + K V ++ + G ++ A VF+K+ R+ +W+A+I Y
Sbjct: 239 WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAY 298
Query: 313 GFELEALGLFARMQRE-GAALNFPXXXXXXXXXXXXXXXDHGRQVHARL-VRSEFDQDLY 370
G+ +A+ R++RE G + + GR + + R E
Sbjct: 299 GYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHE 358
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVV-MWNSMITGYSQHG---LGEEALNVFRDM 426
S ++ + + G L A + + P+K + +W +++ G H LGE A+ D+
Sbjct: 359 HYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDL 418
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 25/242 (10%)
Query: 117 TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--- 173
T ++R YV++ + +A ++F +P+ +VV W V++ G ++ + ++F M VK
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 174 -DVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARK 227
D +VT + + G L + + + + + K+ +V T +V YA+ ++ A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP----VKP-VVACNEMIMGFGFDG 282
+F+ + RN SW A++ GY G ++A + + +KP V ++ G
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 283 DVDRAKAVFEKMRERDDGT-----WSAMIKVYERKGFELEALGLFARMQRE------GAA 331
++ +++ E M R + T +S ++ + R G +AL L +M + GA
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395
Query: 332 LN 333
LN
Sbjct: 396 LN 397
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG + Y + +ARKVFDE P W+ ++ Y + + + +F K
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIP--QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG 213
Query: 82 I----VSWNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEA 132
+ S ++ + G +A+ + + + + + +V T++V Y + G +E A
Sbjct: 214 LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETA 273
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCE 187
+F ++ +NV SW ++GG + A + + + D V + ++
Sbjct: 274 VEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH 333
Query: 188 EGRLEEARALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKLFEVMPERNEVS-WT 241
G LEE R++ + M R +T ++ +V R R+D A L E MP + S W
Sbjct: 334 GGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWG 393
Query: 242 AMLMG 246
A+L G
Sbjct: 394 ALLNG 398
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 50/235 (21%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV- 144
G++ +V++ ++ +AR+VFD +P +VV W ++ GYV+ G E +F M K +
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 145 ---VSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCEEGRLEEARA 196
S T L + + + + + + K DV T ++ Y + G +E A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 197 LFDEMPKRNVVTWTTMVSGYA-------------RNRRVD-------------------- 223
+F ++ +RNV +W ++ GYA R R D
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 224 ---VARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
R + E M R E++ ++ ++ +GR+ +A + MP+KP+ +
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 227/461 (49%), Gaps = 29/461 (6%)
Query: 173 KDVVAVTNMIGGYCEEGRLEE----ARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKL 228
++ A++ ++ + L + A ++FD + N + TM+ +R+ + + +
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 229 FEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMG-FGFDGDVDR- 286
F +M + E T + + + FF V + C + G F DG V
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFS---VGKQIHCWVVKNGVFLSDGHVQTG 157
Query: 287 -------------AKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
A+ VF+++ + D W ++ Y R G E L +F M G +
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPD 217
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEF-DQDLYVASALITMYVKCGDLVRAKWIF 392
G+ +H + + + + D++V +AL+ MY KCG + A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 393 NRYPLKDVVMWNSMITGYSQHGLGEEALNVF-RDMCLSGVPPDDISFIGVLSACSYSGKV 451
+ ++V W ++I GY+ +G ++A R G+ PD + +GVL+AC++ G +
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 452 KEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLG 511
+EGR + E+M+ +Y + P EHY+C+VDL+ RAG+++DA++++EKMPM+P A VWG+LL
Sbjct: 338 EEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
Query: 512 ACRTHMKLDLAEVAVEKLAQLEPKNA----GPYVLLSHMYASKGRWEDVEVVREKIKTRS 567
CRTH ++L E+AV+ L LE N V LS++Y S R + VR I+ R
Sbjct: 398 GCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRG 457
Query: 568 VIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLD 608
+ K PG+S +EV+ FV GD + HP I ++ L
Sbjct: 458 IRKTPGWSLLEVDGIVTKFVSGDVS-HPNLLQIHTLIHLLS 497
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 117 TSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--- 173
T ++R YV++ + +A ++F +P+ +VV W V++ G ++ + ++F M V+
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 174 -DVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRVDVARK 227
D +VT + + G L + + + + + K+ +V T +V YA+ ++ A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP----VKP-VVACNEMIMGFGFDG 282
+FE + RN SW A++ GY G ++A+ D + +KP V ++ G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 283 DVDRAKAVFEKMRERDDGT-----WSAMIKVYERKGFELEALGLFARMQRE------GAA 331
++ + + E M R T +S ++ + R G +AL L +M + GA
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 332 LN 333
LN
Sbjct: 396 LN 397
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 22/245 (8%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
TG + Y + +ARKVFDE P W+ ++ Y + + + +F+ +
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIP--QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 82 I----VSWNGMVSGFVKNGMVAEARRVFDAMPVR-----NVVSWTSMVRGYVQEGNVEEA 132
I S ++ + G +A+ + + + + + +V T++V Y + G +E A
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Query: 133 ERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-----DVVAVTNMIGGYCE 187
+F ++ +NV SW ++GG + A D + + D V + ++
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 188 EGRLEEARALFDEMPKRNVVT-----WTTMVSGYARNRRVDVARKLFEVMPERNEVS-WT 241
G LEE R + + M R +T ++ +V R R+D A L E MP + S W
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWG 393
Query: 242 AMLMG 246
A+L G
Sbjct: 394 ALLNG 398
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 122/300 (40%), Gaps = 32/300 (10%)
Query: 142 KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
K + W V G L D V+ T ++ Y E+ L +AR +FDE+
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQ-----------------TGVLRIYVEDKLLFDARKVFDEI 178
Query: 202 PKRNVVTWTTMVSGYAR----NRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREAS 257
P+ +VV W +++GY R + ++V +++ E +E S T L G + +
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238
Query: 258 EFFDAMPVK-----PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK 312
+ + K V ++ + G ++ A VFEK+ R+ +W+A+I Y
Sbjct: 239 WIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAY 298
Query: 313 GFELEALGLFARMQRE-GAALNFPXXXXXXXXXXXXXXXDHGRQVHARL-VRSEFDQDLY 370
G+ +A R++RE G + + GR + + R
Sbjct: 299 GYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHE 358
Query: 371 VASALITMYVKCGDLVRAKWIFNRYPLKDVV-MWNSMITGYSQHG---LGEEALNVFRDM 426
S ++ + + G L A + + P+K + +W +++ G H LGE A+ D+
Sbjct: 359 HYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDL 418
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 185/358 (51%), Gaps = 8/358 (2%)
Query: 230 EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKA 289
+V+P +N +++ YT G + A + F +P + +V+ N +I G +GDV A
Sbjct: 151 QVLPVQN-----SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 290 VFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXX 349
+F++M +++ +W+ MI Y ++ LF M R G N
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 350 XDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITG 409
GR VHA L+R+ + + + +ALI MY KC ++ A+ IF+ +++ V WN MI
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP 469
+ HG E L +F M + PD+++F+GVL C+ +G V +G+ + M ++Q++P
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 470 GIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLDLAEVAV 526
H CM +L AG +A E ++ +P E P++ W +LL + R L E
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 527 EKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAH 584
+ L + +P N Y LL ++Y+ GRWEDV VRE +K R + ++PG +++++ H
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N+++ Y A LF P+++IVSWN +++G V+NG V A ++FD MP +N++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDAR----KL 166
SW M+ Y+ N + LF M + N + ++L + +R+++ R L
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVAR 226
VV T +I Y + + AR +FD + RN VTW M+ + + R +
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 227 KLFEVMPE----RNEVSWTAMLMGYTHSGRMREASEFF----DAMPVKP 267
+LFE M +EV++ +L G +G + + ++ D +KP
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 33/243 (13%)
Query: 305 MIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSE 364
+ K Y +ALG + + R G + D G+ H + ++
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG---------- 414
DQ L V ++L+ MY CG L AK +F P +D+V WNS+I G ++G
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 415 -----------------LGEE----ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKE 453
LG ++++FR+M +G ++ + + +L+AC S ++KE
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 454 GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
GR + S+ + + + ++D+ G+ +V A I + + + + + W ++ A
Sbjct: 269 GRSVHASL-IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAH 326
Query: 514 RTH 516
H
Sbjct: 327 CLH 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 110/285 (38%), Gaps = 61/285 (21%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF---------- 74
I+ R G + A K+FDE P + SWN M++AY A+ P +++LF
Sbjct: 191 IAGMVRNGDVLAAHKLFDEMP--DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 75 -----------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEARRVF 105
T ++V ++ + K V ARR+F
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 106 DAMPVRNVVSWTSMVRGYV----QEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVE 161
D++ +RN V+W M+ + EG +E E + M + V++ +L G + V
Sbjct: 309 DSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVS 368
Query: 162 DARKLFDMMPVKDVVAVTN------MIGGYCEEGRLEEARALFDEMPKRNV----VTWTT 211
+ + +M V + N M Y G EEA +P +V W
Sbjct: 369 QGQSYYSLM-VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWAN 427
Query: 212 MVSG--YARNRRV--DVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
++S + N + +A+ L E P N + ++ Y+ +GR
Sbjct: 428 LLSSSRFTGNPTLGESIAKSLIETDP-LNYKYYHLLMNIYSVTGR 471
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 178/314 (56%), Gaps = 18/314 (5%)
Query: 281 DGDVDRAKAVFEKMRERDDGTWSAMIKVY---ERKGFE--LEALGLFARMQREGAALNFP 335
+GD+ A+ VF++M ER TW+AMI Y + KG +A+ LF R G+ + P
Sbjct: 160 NGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR-P 218
Query: 336 XXXXX---XXXXXXXXXXDHGRQVHARLVRSEF--DQDLYVASALITMYVKCGDLVRAKW 390
+ G VH + + F + D+++ +AL+ MY KCG L A
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 391 IFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGK 450
+F +K+V W SM TG + +G G E N+ M SG+ P++I+F +LSA + G
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 451 VKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
V+EG E+F+SMK ++ V P IEHY C+VDLLG+AG++ +A + + MP++PDAI+ SL
Sbjct: 339 VEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLC 398
Query: 511 GACRTHMKLDLAEVAVEKLAQLE---PKNAGP----YVLLSHMYASKGRWEDVEVVREKI 563
AC + + + E + L ++E K +G YV LS++ A KG+W +VE +R+++
Sbjct: 399 NACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
Query: 564 KTRSVIKLPGYSWI 577
K R + PGYS++
Sbjct: 459 KERRIKTRPGYSFV 472
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 92 FVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEG-----NVEEAERLFWRM------- 139
+ KNG + AR+VFD MP R V+W +M+ GY N +A LF R
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 140 -PEKN----VVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
P V+S G L S V + P DV T ++ Y + G L A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 195 RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
++F+ M +NV TWT+M +G A N R + L M E NE+++T++L Y H
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 251 GRMREASEFFDAMP----VKPVV 269
G + E E F +M V PV+
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVI 359
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 109/276 (39%), Gaps = 67/276 (24%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQ-----AHQPHQAVTLF-- 74
T + YA+ G + ARKVFDE P RT+ +WNAM+ Y H +A+ LF
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMP--ERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRR 208
Query: 75 -----------ETT--------PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVS 115
+TT + ++ +V G+++ P +V
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK---------LGFTPEVDVFI 259
Query: 116 WTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV 175
T++V Y + G + A +F M KNV +WT M GL + R + L + M +
Sbjct: 260 GTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI 319
Query: 176 ----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEV 231
+ T+++ Y G +EE LF M R F V
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR------------------------FGV 355
Query: 232 MPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKP 267
P L+G +GR++EA +F AMP+KP
Sbjct: 356 TPVIEHYGCIVDLLG--KAGRIQEAYQFILAMPIKP 389
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 353 GRQVHARLVRSEF--DQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
GR VH + + F + +L + + L+ Y K GDL A+ +F+ P + V WN+MI GY
Sbjct: 130 GRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 411 SQHG-----LGEEALNVFR--DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
H +A+ +FR C SGV P D + + VLSA S +G ++ G + ++
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE- 247
Query: 464 KYQVEPGIEHY--ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSL 509
K P ++ + +VD+ + G +N+A + E M ++ + W S+
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSM 294
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 52/200 (26%)
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYA--RNRRVDVARK--------- 227
T ++ Y + G L AR +FDEMP+R VTW M+ GY +++ ARK
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 228 ------------------------LFEV-------------MPERNEVSWTAMLMGYTHS 250
L E+ PE + TA++ Y+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 251 GRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMI 306
G + A F+ M VK V M G +G + + +M E ++ T+++++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 307 KVYERKGFELEALGLFARMQ 326
Y G E + LF M+
Sbjct: 331 SAYRHIGLVEEGIELFKSMK 350
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 214/415 (51%), Gaps = 11/415 (2%)
Query: 173 KDVVAVTNMIGGYCEEGRL-EEARALFDEMPKRNVVTWTTMVSGYARN----RRVDVARK 227
+VV + ++ Y + L + ++F MP RN+ +W ++ ++R+ + +D+ +
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 228 LFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNEMIMGFGFDG 282
++ R + +++ + R ++ + + +K + + +++ + G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
+ A+ +F+ M RD ++AM Y ++G + L +F M G AL+
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
HG+ VH +R L + +A+ MYVKC L A +F +DV+
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
W+S+I GY G + +F +M G+ P+ ++F+GVLSAC++ G V++ F M+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+Y + P ++HYA + D + RAG + +A + +E MP++PD V G++L C+ + +++
Sbjct: 364 -EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 523 EVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWI 577
E +L QL+P+ A YV L+ +Y++ GR+++ E +R+ +K + + K+PG S I
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 170/441 (38%), Gaps = 78/441 (17%)
Query: 80 KNIVSWNGMVSGFVK-NGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWR 138
N+V + +V + K N + + VF MP RN+ SW ++ + + G ++ LF R
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 139 MPEKNVV---SWTVMLGGLLKDSRVEDARKLFDMMPV--------KDVVAVTNMIGGYCE 187
M ++ V +T+ L +L+ K D++ V + + ++ Y +
Sbjct: 124 MWRESCVRPDDFTLPL--ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 188 EGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAM 243
G+L AR LFD+MP R+ V +T M GY + + +F M + V ++
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 244 LMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD------GDVDRAKAVFEKMRER 297
LM G ++ + +C + +G +D A VF M R
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRR--CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 298 DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVH 357
D +WS++I Y G + + LF M +EG N
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN------------------------ 335
Query: 358 ARLVRSEFDQDLYVASALITMYVKC--GDLVRAKWIFNRY-----PLKDVVMWNSMITGY 410
A + + C G LV W++ R + ++ + S+
Sbjct: 336 --------------AVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCM 381
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEP- 469
S+ GL EEA DM V PD+ VLS C G V+ G + + Q++P
Sbjct: 382 SRAGLLEEAEKFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGERVAREL---IQLKPR 435
Query: 470 GIEHYACMVDLLGRAGQVNDA 490
+Y + L AG+ ++A
Sbjct: 436 KASYYVTLAGLYSAAGRFDEA 456
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 57/302 (18%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE---- 75
S+ + Y +G++ +ARK+FD+ P R + + AM Y Q + + +F
Sbjct: 171 VSSALVIMYVDMGKLLHARKLFDDMPV--RDSVLYTAMFGGYVQQGEAMLGLAMFREMGY 228
Query: 76 ----------------------TTPEKNIVSW-------------NGMVSGFVKNGMVAE 100
K++ W N + +VK ++
Sbjct: 229 SGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDY 288
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLK 156
A VF M R+V+SW+S++ GY +G+V + +LF M E N V++ +L
Sbjct: 289 AHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
Query: 157 DSRVEDARKLFDMMPVKDVVA----VTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTT 211
VE + F +M ++V ++ G LEEA ++MP K +
Sbjct: 349 GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGA 408
Query: 212 MVSGYARNRRVD----VARKLFEVMPERNEVSWTAMLMG-YTHSGRMREASEFFDAMPVK 266
++SG V+ VAR+L ++ P + S+ L G Y+ +GR EA M K
Sbjct: 409 VLSGCKVYGNVEVGERVARELIQLKPRK--ASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
Query: 267 PV 268
+
Sbjct: 467 QI 468
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 24/246 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
+A+V Y + A LF+ P ++ V + M G+V+ G +F M
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 112 -NVVSWTSMVRGYVQEGNVEEAERLF-WRMPEKNVVSWTVMLGGLLKD-----SRVEDAR 164
+ V S++ Q G ++ + + W + + + LG + D S ++ A
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAH 290
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNR 220
+F M +DV++ +++I GY +G + + LFDEM K N VT+ ++S A
Sbjct: 291 TVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGG 350
Query: 221 RVDVARKLFEVMPERNEVS----WTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIM 276
V+ + F +M E N V + ++ + +G + EA +F + MPVKP +E +M
Sbjct: 351 LVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKP----DEAVM 406
Query: 277 GFGFDG 282
G G
Sbjct: 407 GAVLSG 412
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 204/413 (49%), Gaps = 18/413 (4%)
Query: 191 LEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAML-- 244
L AR L TW + GY+ + + ++ M R N++++ +L
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 245 ----MGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
+G T +GR + V N +I +G A+ VF++M ER+
Sbjct: 123 CASFLGLT-AGRQIQVEVLKHGFDFDVYVG-NNLIHLYGTCKKTSDARKVFDEMTERNVV 180
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
+W++++ G F M G G+ VH+++
Sbjct: 181 SWNSIMTALVENGKLNLVFECFCEMI--GKRFCPDETTMVVLLSACGGNLSLGKLVHSQV 238
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEAL 420
+ E + + + +AL+ MY K G L A+ +F R K+V W++MI G +Q+G EEAL
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 421 NVFRDMCL-SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD 479
+F M S V P+ ++F+GVL ACS++G V +G + F M+ ++++P + HY MVD
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 480 LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLD---LAEVAVEKLAQLEPKN 536
+LGRAG++N+A + ++KMP EPDA+VW +LL AC H D + E ++L +LEPK
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Query: 537 AGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGG 589
+G V++++ +A W + VR +K + K+ G S +E+ H F G
Sbjct: 419 SGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 160/380 (42%), Gaps = 31/380 (8%)
Query: 66 QPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQ 125
Q H + L + I+S VS +A AR + +W + RGY
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 126 EGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDS------------RVEDARKLFDMMPVK 173
+ E+ ++ M + + + LLK +VE + FD
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF---- 146
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLF-EVM 232
DV N+I Y + +AR +FDEM +RNVV+W ++++ N ++++ + F E++
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACN-----EMIMGFGFDGDVDRA 287
+R T M++ + G + + + + N ++ + G ++ A
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 288 KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAAL-NFPXXXXXXXXXXX 346
+ VFE+M +++ TWSAMI + GF EAL LF++M +E + N+
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVA-SALITMYVKCGDLVRAKWIFNRYPLK-DVVMWN 404
D G + + + + + + A++ + + G L A + P + D V+W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 405 SMITGYSQH------GLGEE 418
++++ S H G+GE+
Sbjct: 387 TLLSACSIHHDEDDEGIGEK 406
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
D+ A+ + + TW+ + + Y +E++ +++ M+R G N
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
GRQ+ +++ FD D+YV + LI +Y C A+ +F+ ++VV
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
WNS++T ++G F +M PD+ + + +LSAC G + G+ + +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVM 239
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL 510
+ ++E +VD+ ++G + A + E+M ++ + W +++
Sbjct: 240 VR-ELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR--- 111
N ++ Y + A +F+ E+N+VSWN +++ V+NG + F M +
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 112 ----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF 167
+V S G + G + ++ + R E N T ++ K +E AR +F
Sbjct: 212 PDETTMVVLLSACGGNLSLGKLVHSQVMV-RELELNCRLGTALVDMYAKSGGLEYARLVF 270
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRRV 222
+ M K+V + MI G + G EEA LF +M K N VT+ ++ + V
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLV 330
Query: 223 DVARKLFEVMPERNEVS-----WTAMLMGYTHSGRMREASEFFDAMPVKP 267
D K F M + +++ + AM+ +GR+ EA +F MP +P
Sbjct: 331 DDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEP 380
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 63/270 (23%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF---------- 74
I Y + +ARKVFDE R SWN+++ A + + + F
Sbjct: 155 IHLYGTCKKTSDARKVFDEMTE--RNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCP 212
Query: 75 -ETT--------------------------PEKNIVSWNGMVSGFVKNGMVAEARRVFDA 107
ETT E N +V + K+G + AR VF+
Sbjct: 213 DETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFER 272
Query: 108 MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV--SWTVMLGGLLKDSR---VED 162
M +NV +W++M+ G Q G EEA +LF +M +++ V ++ LG L S V+D
Sbjct: 273 MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDD 332
Query: 163 ARKLFDMM----PVKDVV----AVTNMIGGYCEEGRLEEARALFDEMP-KRNVVTWTTMV 213
K F M +K ++ A+ +++G GRL EA +MP + + V W T++
Sbjct: 333 GYKYFHEMEKIHKIKPMMIHYGAMVDILG---RAGRLNEAYDFIKKMPFEPDAVVWRTLL 389
Query: 214 SGYARNRRVD-------VARKLFEVMPERN 236
S + + D V ++L E+ P+R+
Sbjct: 390 SACSIHHDEDDEGIGEKVKKRLIELEPKRS 419
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 235/505 (46%), Gaps = 20/505 (3%)
Query: 97 MVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLG 152
+V A ++FD M RN+ ++R + Q G + ++ RM KN +++ M+
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 153 GLLKDSRVEDARKLFDMM-----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV 207
G D V + ++L ++ + ++ ++ Y G L + F+ +P+++V+
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 208 TWTTMVSGYARNRRVDVARKLFEVMP---ERNEVSWTAMLMGYT------HSGRMREASE 258
+W ++VS A V + LF M +R + + + SG+
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 259 FFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA 318
V + + +I +G ++ + +++ + + ++++ G +
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI 401
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXX--XXDHGRQVHARLVRSEFDQDLYVASALI 376
+ +F M EG ++ VH ++S + D+ V+ +LI
Sbjct: 402 IEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLI 461
Query: 377 TMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
Y K G ++ +F+ ++ S+I GY+++G+G + + + R+M + PD++
Sbjct: 462 DAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEV 521
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
+ + VLS CS+SG V+EG IF+S++ KY + PG + YACMVDLLGRAG V A ++ +
Sbjct: 522 TILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ 581
Query: 497 MPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDV 556
+ D + W SLL +CR H + A E L LEP+N Y+ +S Y G +E
Sbjct: 582 ARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEIS 641
Query: 557 EVVREKIKTRSVIKLPGYSWIEVEK 581
+RE +R +++ GYS + V+
Sbjct: 642 RQIREIAASRELMREIGYSSVVVKN 666
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 203/503 (40%), Gaps = 69/503 (13%)
Query: 72 TLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEE 131
+ E P + + N + +K+G + A FD M VR+VV++ ++ G + G
Sbjct: 36 SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLR 95
Query: 132 AERLFWRMPEKNV--------VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIG 183
A L+ M + +V L ++ ++ + ++ + ++G
Sbjct: 96 AIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 184 GYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPE-------RN 236
Y ++ A LFDEM RN+ ++ + + +++LFEV +N
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE---SKRLFEVYLRMELEGVAKN 212
Query: 237 EVSWTAMLMGYTHSGRMREASEFFDAM-----PVKPVVACNEMIMGFGFDGDVDRAKAVF 291
+++ M+ G +H + E + + + + N ++ + GD+ + F
Sbjct: 213 GLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSF 272
Query: 292 EKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
+ E+D +W++++ V G L++L LF++MQ G +
Sbjct: 273 NAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQ 332
Query: 352 HGRQVHARLVRSEFD-QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
G+Q+H +++ FD L+V SALI MY KC + + ++ P ++ NS++T
Sbjct: 333 SGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSL 392
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA-------------------------- 444
G+ ++ + +F M G D+++ VL A
Sbjct: 393 MHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAA 452
Query: 445 -----CSY------SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEI 493
CS SG+ + R++F+ + P I +++ R G D V++
Sbjct: 453 DVAVSCSLIDAYTKSGQNEVSRKVFDELD-----TPNIFCLTSIINGYARNGMGTDCVKM 507
Query: 494 V---EKMPMEPDAIVWGSLLGAC 513
+ ++M + PD + S+L C
Sbjct: 508 LREMDRMNLIPDEVTILSVLSGC 530
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 132/346 (38%), Gaps = 95/346 (27%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------ 108
N +V Y ++ F PEK+++SWN +VS G V ++ +F M
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 109 -PVRNVVSW---------------------------------TSMVRGYVQEGNVEEAER 134
+R +S+ ++++ Y + +E +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 135 LFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMP----------------------- 171
L+ +P N+ ++ L+ +D ++F +M
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLP 432
Query: 172 ------------------VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
DV ++I Y + G+ E +R +FDE+ N+ T+++
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 214 SGYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAM------ 263
+GYARN K+ M N EV+ ++L G +HSG + E FD++
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 264 -PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR-ERDDGTWSAMIK 307
P + + AC M+ G G V++A+ + + R + D WS++++
Sbjct: 553 SPGRKLYAC--MVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQ 596
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 242/580 (41%), Gaps = 94/580 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAA------------YFQ------ 63
T + Y R+ +E A +VF++ P ++ +WN M++ +F+
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPF--KSLETWNHMMSLLGHRGFLKECMFFFRELVRMG 210
Query: 64 -----------------------AHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAE 100
+ Q H + T E ++V N ++S + K G
Sbjct: 211 ASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV--NSLISAYGKCGNTHM 268
Query: 101 ARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLK 156
A R+F ++VSW +++ + N +A +LF MPE N ++ +LG
Sbjct: 269 AERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSL 328
Query: 157 DSRVEDARKLFDMMPVKD-----VVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTT 211
+ R++ M+ +K+ +V +I Y + G LE++R FD + +N+V W
Sbjct: 329 VQLLSCGRQIHGML-IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNA 387
Query: 212 MVSGYARNRRVDVARKLFEVMP-----------------------------------ERN 236
++SGYA N+ + LF M E N
Sbjct: 388 LLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDN 446
Query: 237 EVSWTAMLMGYTHSGRMREASEFFD-AMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMR 295
+ ++++ Y + M +A D A VV N + + G + + +
Sbjct: 447 DYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 296 ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQ 355
+ D +W+ I R + E + LF M + + G
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS 566
Query: 356 VHARLVRSEFD-QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHG 414
+H + +++F D +V + LI MY KCG + +F K+++ W ++I+ HG
Sbjct: 567 IHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHG 626
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
G+EAL F++ G PD +SFI +L+AC + G VKEG +F+ MK Y VEP ++HY
Sbjct: 627 YGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHY 685
Query: 475 ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACR 514
C VDLL R G + +A ++ +MP DA VW + L C
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 217/500 (43%), Gaps = 55/500 (11%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEA------ERLFWRM 139
N ++S + K G V+ A +VFD MP RN VS+ ++++GY + G+V++A R F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDM---MPVKDVVAVTNMIGGYCEEGRLEEARA 196
P ++ VS + L D R + + + D T ++ Y LE A
Sbjct: 113 PNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 197 LFDEMPKRNVVTWTTMVS-----GYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSG 251
+F++MP +++ TW M+S G+ + R+L + E S+ +L G +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMF-FFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 252 RMREASEFFDAMPVKPVVAC-----NEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMI 306
+ + S+ K + C N +I +G G+ A+ +F+ D +W+A+I
Sbjct: 230 DL-DISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 307 KVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFD 366
+ L+AL LF M G + N GRQ+H L+++ +
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 367 QDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
+ + +ALI Y KCG+L ++ F+ K++V WN++++GY+ G L++F M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQM 407
Query: 427 CLSGVPPDDISFIGVLSACS-------YSGKVKEGRE----IFESMKCKYQVEPGIEHYA 475
G P + +F L +C +S V+ G E + S+ Y +
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 476 CMVD----------------LLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKL 519
++D + R GQ +++V+++ + +PD + W + AC +
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACS---RS 523
Query: 520 DLAEVAVEKLAQLEPKNAGP 539
D E +E + N P
Sbjct: 524 DYHEEVIELFKHMLQSNIRP 543
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 11/252 (4%)
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFAR 324
++PV CN +I + G+V A VF++M ER+ +++ +IK Y + G +A G+F+
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 325 MQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA-RLVRSEFDQDLYVASALITMYVKCG 383
M+ G N G Q+H L F D +V + L+ +Y +
Sbjct: 106 MRYFGYLPN--QSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 384 DLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
L A+ +F P K + WN M++ G +E + FR++ G + SF+GVL
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEP-- 501
S + +++ S K ++ I ++ G+ G + A E+M +
Sbjct: 224 GVSCVKDLDISKQLHCSAT-KKGLDCEISVVNSLISAYGKCGNTHMA----ERMFQDAGS 278
Query: 502 -DAIVWGSLLGA 512
D + W +++ A
Sbjct: 279 WDIVSWNAIICA 290
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 225/457 (49%), Gaps = 26/457 (5%)
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPE---- 141
N ++S V+ G + AR+VFD+MP +N V+WT+M+ GY++ G +EA LF +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 142 -KNVVSWTVMLGGLLKDSRVEDARKLFDMM---PVKDVVAVTNMIGGYCEEGRLEEARAL 197
N + +L + + E R++ M V +++ ++++ Y + G L A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 198 FDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRM 253
FD M +++V++WT ++S +R A +F M NE + ++L + +
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 254 REASEFFDAMPVKPVVACNEMIMGFGFD-----GDVDRAKAVFEKMRERDDGTWSAMIKV 308
R + ++ VK ++ + + D G++ + VF+ M R+ TW+++I
Sbjct: 301 RFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 309 YERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQD 368
+ R+GF EA+ LF M+R N G+++HA+++++ +++
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN 419
Query: 369 LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
+Y+ S L+ +Y KCG+ A + + P +DVV W +MI+G S G EAL+ ++M
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 429 SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVN 488
GV P+ ++ L AC+ S + GR I S+ K + + ++ + + G V+
Sbjct: 480 EGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 489 DAVEIVEKMPMEPDAIVWGSLL------GACRTHMKL 519
+A + + MP E + + W +++ G CR +KL
Sbjct: 539 EAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALKL 574
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 209/479 (43%), Gaps = 63/479 (13%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFET-------- 76
IS R+G + ARKVFD P + T +W AM+ Y + +A LFE
Sbjct: 124 ISSCVRLGDLVYARKVFDSMPE--KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRF 181
Query: 77 TPEK-------------------------------NIVSWNGMVSGFVKNGMVAEARRVF 105
T E+ N++ + +V + + G + A R F
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAF 241
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLF------WRMPEKNVVSWTVMLGGLLKDSR 159
D M ++V+SWT+++ ++G+ +A +F W +P + V +L ++
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV--CSILKACSEEKA 299
Query: 160 VEDARKLFDM----MPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSG 215
+ R++ + M DV T+++ Y + G + + R +FD M RN VTWT++++
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 216 YARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC 271
+AR + A LF +M R N ++ ++L G + E A +K +
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL-HAQIIKNSIEK 418
Query: 272 N-----EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQ 326
N ++ + G+ A V +++ RD +W+AMI G E EAL M
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 327 REGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
+EG N GR +H+ ++ +++V SALI MY KCG +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 387 RAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
A +F+ P K++V W +MI GY+++G EAL + M G DD F +LS C
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 49/254 (19%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF------- 74
T + YA+ G+I + RKVFD +R T +W +++AA+ + +A++LF
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMS--NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 75 --------------------------------ETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
+ + EKN+ + +V + K G +A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDS 158
V +P R+VVSWT+M+ G G+ EA M E N +++ L
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 159 RVEDARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVS 214
+ R + + + +V + +I Y + G + EA +FD MP++N+V+W M+
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 215 GYARNRRVDVARKL 228
GYARN A KL
Sbjct: 561 GYARNGFCREALKL 574
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+++HA ++ DQ +Y + LI+ V+ GDLV A+ +F+ P K+ V W +MI GY ++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 414 GLGEEALNVFRDMCLSGVP-PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
GL +EA +F D G+ ++ F+ +L+ CS + + GR++ +M V+ G+
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM-----VKVGVG 216
Query: 473 HY---ACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGAC 513
+ + +V + G++ A+ + M E D I W +++ AC
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMME-EKDVISWTAVISAC 259
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 27/396 (6%)
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
EA+ + ++ +G A++ + R VH ++ D+ +A+I
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 377 TMYVKCGDLVRAKWIFNRYPLKDVVMWNS-----MITGYSQHGLGEEALNVFRDMCLSGV 431
MY C + A +F P WNS M+ + +G GEEA+++F G
Sbjct: 162 EMYSGCCSVDDALKVFEEMP-----EWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 432 PPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV 491
P+ F V S C+ +G VKEG F++M +Y + P +EHY + +L +G +++A+
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 492 EIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKG 551
VE+MPMEP VW +L+ R H ++L + E + +L+ V + + A+K
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDK-VSSAGLVATKA 335
Query: 552 RWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLL 611
+ V+++ TRS E + ++ HP+ II + L L L
Sbjct: 336 S----DFVKKEPSTRS------------EPYFYSTFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 612 RDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCH 671
++ GY PD + + E + + E++A+ LLK I ++ N+R+ GDCH
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCH 439
Query: 672 SAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
+KL++ +TGR++I RDA +H FK+G C C + W
Sbjct: 440 DMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 183/399 (45%), Gaps = 31/399 (7%)
Query: 106 DAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARK 165
D + VR ++S +S G + A +F ++ + +W +M+ L + + +A
Sbjct: 51 DQLLVRQLISVSSSF------GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALL 104
Query: 166 LFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVA 225
LF +M + + + L + + T V G A +
Sbjct: 105 LFILMMISHQSQFDKFTFPFVIKACLASSS-----------IRLGTQVHGLA------IK 147
Query: 226 RKLFEVMPERNEVSWTAMLMG-YTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV 284
F N+V + LM Y G+ + FD MP + +V+ M+ G + +
Sbjct: 148 AGFF------NDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 285 DRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
D A+ VF +M R+ +W+AMI Y + EA LF RMQ + N
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWN 404
GR VH ++ F D ++ +ALI MY KCG L A+ +F+ K + WN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 405 SMITGYSQHGLGEEALNVFRDMCL-SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
SMIT HG GEEAL++F +M + V PD I+F+GVLSAC+ +G VK+G F M
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 464 KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPD 502
Y + P EH ACM+ LL +A +V A +VE M +PD
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 50/284 (17%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF-------ETT 77
IS + G+ + A VF++ +T +WN M+ + H+P +A+ LF ++
Sbjct: 59 ISVSSSFGETQYASLVFNQLQS--PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQ 116
Query: 78 PEK---------------------------------NIVSWNGMVSGFVKNGMVAEARRV 104
+K ++ N ++ + K G R+V
Sbjct: 117 FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDAR 164
FD MP R++VSWT+M+ G V ++ AE +F +MP +NVVSWT M+ +K+ R ++A
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 165 KLFDMMPVKDV----VAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMVSGY 216
+LF M V DV + N++ + G L R + D K V T ++ Y
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 217 ARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFF 260
++ + ARK+F+VM ++ +W +M+ G EA F
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 26/267 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV 114
N ++ YF+ +P +F+ P ++IVSW M+ G V N + A VF+ MP+RNVV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRM------PEK----NVVSWTVMLGGLLKDSRVEDAR 164
SWT+M+ YV+ +EA +LF RM P + N++ + LG L V D
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDV 224
V D T +I Y + G L++AR +FD M +++ TW +M++ + +
Sbjct: 278 HKNGF--VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 225 ARKLFEVMP-----ERNEVSWTAMLMGYTHSGRMREASEFFDAM-------PVKPVVACN 272
A LFE M E + +++ +L ++G +++ +F M P++ AC
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNAC- 394
Query: 273 EMIMGFGFDGDVDRAKAVFEKMRERDD 299
MI +V++A + E M D
Sbjct: 395 -MIQLLEQALEVEKASNLVESMDSDPD 420
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 132/329 (40%), Gaps = 59/329 (17%)
Query: 43 ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEAR 102
E + RT S+++ Q Q H + T ++ +V ++S G A
Sbjct: 22 EASYFLRTCSNFS-------QLKQIHTKIIKHNLTNDQLLV--RQLISVSSSFGETQYAS 72
Query: 103 RVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRM-----PEKNVVSWTVMLGGLLKD 157
VF+ + + +W M+R EA LF M + + ++ ++ L
Sbjct: 73 LVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLAS 132
Query: 158 SRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMV 213
S + ++ + DV ++ Y + G+ + R +FD+MP R++V+WTTM+
Sbjct: 133 SSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTML 192
Query: 214 SGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
G N ++D A +F MP RN VSWTAM+ Y + R EA + F M V V NE
Sbjct: 193 YGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP-NE 251
Query: 274 MIM--------------------------GFGFD--------------GDVDRAKAVFEK 293
+ GF D G + A+ VF+
Sbjct: 252 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 294 MRERDDGTWSAMIKVYERKGFELEALGLF 322
M+ + TW++MI G EAL LF
Sbjct: 312 MQGKSLATWNSMITSLGVHGCGEEALSLF 340
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+Q+H ++++ D + LI++ G+ A +FN+ WN MI S +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 414 GLGEEALNVFRDMCLSGVPP-DDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
EAL +F M +S D +F V+ AC S ++ G ++ + K +
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV-HGLAIKAGFFNDVF 155
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKL 529
++DL + G+ + ++ +KMP + W ++L ++ +LD AE+ ++
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 234/534 (43%), Gaps = 73/534 (13%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMV-AAYFQAHQPHQAVT-----LFE 75
T + Y G +++A+KVFDE+ SWNA++ + +Q V + E
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDES--TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 76 TTPEKNIVSWNGMVSGF-----VKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVE 130
+ N+ S + + F ++ G+ A + + + +V TS+V Y + G V
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL-FNSVFLKTSLVDMYFKCGKVG 266
Query: 131 EAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMM-----------------PV- 172
A R+F + E+++V W M+ GL + R +A LF M PV
Sbjct: 267 LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 173 KDVVAV-----------------------TNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
DV A+ + +I YC+ G + R +F +RN ++W
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISW 386
Query: 210 TTMVSGYARNRRVDVARKLFEVMPE---RNEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
T ++SGYA N R D A + M + R +V A ++ R + + +K
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 267 PVVACN-----EMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYE-----RKGFEL 316
+ N +++ + G + +F+++ +R+ W+AMI Y R G E+
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
L L ++ + + + G+++H +++ EF+ +V++ +I
Sbjct: 507 FRLMLLSKHRPDSVTMG-----RVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARII 561
Query: 377 TMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
MY KCGDL A + F+ +K + W ++I Y + L +A+N F M G P+
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDA 490
+F VLS CS +G V E F M Y ++P EHY+ +++LL R G+V +A
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 139/329 (42%), Gaps = 34/329 (10%)
Query: 216 YARNRRVDVARKLFEVMPER----NEVSWTAML------MGYTHSGRMR--------EAS 257
+AR ++VA + + + +R N +++A+L H ++ E++
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 258 EFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK--VYERKGFE 315
EF V AC G V A+ VF++ + +W+A+++ V K
Sbjct: 146 EFLRTKLVHMYTAC----------GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRY 195
Query: 316 LEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASAL 375
+ L F M+ G LN G + HA +++ +++ ++L
Sbjct: 196 QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL 255
Query: 376 ITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL-SGVPPD 434
+ MY KCG + A+ +F+ +D+V+W +MI G + + EAL +FR M + P+
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPN 315
Query: 435 DISFIGVLSACSYSGKVKEGREIFES-MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEI 493
+ +L +K G+E+ +K K VE H + ++DL + G + +
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCGDMASGRRV 374
Query: 494 VEKMPMEPDAIVWGSLLGACRTHMKLDLA 522
+ +AI W +L+ + + D A
Sbjct: 375 FYG-SKQRNAISWTALMSGYAANGRFDQA 402
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 28/397 (7%)
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
EAL + ++ +G ++FP + R VH + + D Y +I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI--TPLDARSY--HTVI 150
Query: 377 TMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
MY C A +FN P ++ W +MI +++G GE A+++F G PD
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
F V AC G + EG FESM Y + +E Y ++++L G +++A++ VE+
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 497 MPMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPK------NAGPYVLLSHMYASK 550
M +EP +W +L+ C L+L + E + +L+ NAG + A+K
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAG-------LVAAK 323
Query: 551 GRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGL 610
+E ++E + + P +K+ H F GD + + L
Sbjct: 324 ASDSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTS----HLGTVSAFRSLKVQ 372
Query: 611 LRDAGYSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDC 670
+ D G+ P VEEEEK L + S KLA A+ ++ P+ V++N+R C D
Sbjct: 373 MLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDG 432
Query: 671 HSAIKLIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
H+ K+I+ +TGR +I RD ++H +K+G CSCKDYW
Sbjct: 433 HNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 558 VVREKIKTRSVIK--LPGYSWIEVEKKAHMFVGGDNNCHPEQPIIMKMLERLDGLLRDAG 615
VVR ++ + ++ P +V GG+ ++ L+ L +RDAG
Sbjct: 88 VVRNTVRKDTTLRHISPSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAG 147
Query: 616 YSPDHSFVLHDVEEEEKTHSLGYHSEKLAIAYGLLKVPEGMPIRVMKNLRVCGDCHSAIK 675
Y P+ +VLHD++EE K +L +HSE+LAIA+G++ P G IRVMKNLR+CGDCH+ IK
Sbjct: 148 YVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIK 207
Query: 676 LIAKVTGREIIVRDANRFHHFKDGYCSCKDYW 707
+++ + REIIVRD RFHHF+DG CSC DYW
Sbjct: 208 ILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 204/445 (45%), Gaps = 63/445 (14%)
Query: 50 TTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVF 105
T ++N ++ F ++ +AV L + + ++ ++ +V+G K G + A +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 106 DAMPV----RNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKD 157
M +VV +T+++ NV +A LF M K NVV++ ++ L
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 158 SRVEDARKLF-DMMPVK---DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTW 209
R DA +L DM+ K +VV + +I + +EG+L EA L+DEM KR ++ T+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 210 TTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP- 264
+++++G+ + R+D A+ +FE+M + N V++ ++ G+ + R+ E E F M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 265 ---VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGL 321
V V N +I G GD D A+ +F+KM DG +I L+ L
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPDIITY----SILLDGLCK 477
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
+ ++++ + L +S+ + D+Y + +I K
Sbjct: 478 YGKLEKALVVFEY-------------------------LQKSKMEPDIYTYNIMIEGMCK 512
Query: 382 CGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
G + +F LK +V+++ +MI+G+ + GL EEA +FR+M G P+ +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 438 FIGVLSACSYSGKVKEGREIFESMK 462
+ ++ A G E+ + M+
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMR 597
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 235/530 (44%), Gaps = 82/530 (15%)
Query: 33 QIENARKVFDETPHIHRTTS--SWNAMVAAYFQAHQPHQAVTLFETTPEKNI----VSWN 86
++++A +F E S +N +++A + ++ ++L E I S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 87 GMVSGFVKNGMVAEARRVFDAM------PVRNVVSWTSMVRGYVQEGNVEEA----ERLF 136
+++ F + + A V M P ++V+ +S++ GY + EA +++F
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEP--DIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 137 WRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLE 192
+ N V++ ++ GL ++ +A L D M + D+ ++ G C+ G ++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 193 EARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAML 244
A +L +M K +VV +TT++ + V+ A LF M + N V++ +++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 245 MGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER--- 297
+ GR +AS M + P VV + +I F +G + A+ ++++M +R
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 298 -DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQV 356
D T+S++I GF + D + +
Sbjct: 358 PDIFTYSSLIN-----GFCMH------------------------------DRLDEAKHM 382
Query: 357 HARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF----NRYPLKDVVMWNSMITGYSQ 412
++ + ++ + LI + K + +F R + + V +N++I G Q
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
G + A +F+ M GVPPD I++ +L GK+++ +FE ++ K ++EP I
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ-KSKMEPDIY 501
Query: 473 HYACMVDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLL-GACRTHMK 518
Y M++ + +AG+V D ++ + + +P+ I++ +++ G CR +K
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 231/538 (42%), Gaps = 60/538 (11%)
Query: 19 CTSTGAI-----SRYARIGQIENARKV--FDETPHIHRTTSSWNAMVAAYFQAHQPHQAV 71
C ST ++ Y+R+ I+ A + + S+NA++ A ++ +
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 72 T-----LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRG 122
+ E+ N+ ++N ++ GF G + A +FD M + NVV++ +++ G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 123 YVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----D 174
Y + +++ +L M E N++S+ V++ GL ++ R+++ + M + D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 175 VVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFE 230
V +I GYC+EG +A + EM + +V+T+T+++ + ++ A + +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 231 VMPER----NEVSWTAMLMGYTHSGRMREA----SEFFDAMPVKPVVACNEMIMGFGFDG 282
M R NE ++T ++ G++ G M EA E D VV N +I G G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 283 DVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXX 338
++ A AV E M+E+ D ++S ++ + R EAL + M +G +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 339 XXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN----R 394
++ ++R D + +ALI Y GDL +A + N +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 395 YPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS-------- 446
L DVV ++ +I G ++ EA + + P D+++ ++ CS
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 447 -------YSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
G + E ++FESM K +P Y M+ RAG + A + ++M
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 182/433 (42%), Gaps = 70/433 (16%)
Query: 113 VVSWTSMVRGYVQEG-NVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLF 167
V+S+ +++ ++ N+ AE +F M E NV ++ +++ G ++ A LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 168 DMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARN 219
D M K +VV +I GYC+ ++++ L M + N++++ +++G R
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 220 RRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREA----SEFFDAMPVKPVVAC 271
R+ + M R +EV++ ++ GY G +A +E V+
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQR 327
+I G+++RA ++MR R ++ T++ ++ + +KG+ EA + M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
G F + +ALI + G +
Sbjct: 409 NG-----------------------------------FSPSVVTYNALINGHCVTGKMED 433
Query: 388 AKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
A + K DVV ++++++G+ + +EAL V R+M G+ PD I++ ++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAV----EIVEKMPM 499
+ KE +++E M + + P Y +++ G + A+ E+VEK +
Sbjct: 494 GFCEQRRTKEACDLYEEM-LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 500 EPDAIVWGSLLGA 512
PD + + L+
Sbjct: 553 -PDVVTYSVLING 564
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 243/566 (42%), Gaps = 79/566 (13%)
Query: 28 YARIGQIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----N 81
Y + G+ + A ++ D ++ + ++N ++ ++++ + L ++ N
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPV----RNVVSWTSMVRGYVQEGNVEEAERLFW 137
V++N +++GF G V A ++ + M N V++ +++ G++ EGN +EA ++F+
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 138 RMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEG 189
M K + VS+ V+L GL K++ + AR + M V + T MI G C+ G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 190 RLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVAR----KLFEVMPERNEVSWT 241
L+EA L +EM K ++VT++ +++G+ + R A+ +++ V N + ++
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 242 AMLMGYTHSGRMREASEFFDAMPV----KPVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
++ G ++EA ++AM + + N ++ G V A+ M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS- 576
Query: 298 DDG------TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
DG ++ +I Y G L+A +F M + G + P
Sbjct: 577 -DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG---HHPTFFTYGSLLKGLCKGG 632
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYS 411
H R+ +F + L+ A + D VM+N+++T
Sbjct: 633 HLREAE------KFLKSLHAVPAAV----------------------DTVMYNTLLTAMC 664
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+ G +A+++F +M + PD ++ ++S GK + + + V P
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
Y C VD + +AGQ + E+M PD + +++ + ++ E +
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG---YSRMGKIEKTNDL 781
Query: 529 LAQLEPKNAGP----YVLLSHMYASK 550
L ++ +N GP Y +L H Y+ +
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKR 807
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 217/513 (42%), Gaps = 45/513 (8%)
Query: 39 KVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIVSWNGMVSGFVKNGMV 98
+++D HI + S + + F A L + P ++ ++ +++ GM+
Sbjct: 126 RMYDPARHILKELSLMSGKSSFVFGALMT--TYRLCNSNPS----VYDILIRVYLREGMI 179
Query: 99 AEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVM 150
++ +F M + +V + +++ V+ G M ++ +V ++ ++
Sbjct: 180 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 151 LGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-- 204
+ L + E + L M +V ++ YC++GR + A L D M +
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 205 --NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASE 258
+V T+ ++ R+ R+ L M +R NEV++ ++ G+++ G++ AS+
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 259 FFDAM---PVKPV-VACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIK-VY 309
+ M + P V N +I G +G+ A +F M + + ++ ++ +
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 310 ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDL 369
+ F+L A G + RM+R G + D + + + D D+
Sbjct: 420 KNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 370 YVASALITMYVKCGDLVRAKWIFNR-YPL---KDVVMWNSMITGYSQHGLGEEALNVFRD 425
SALI + K G AK I R Y + + ++++++I + G +EA+ ++
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M L G D +F ++++ +GKV E E M + P + C+++ G +G
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSG 597
Query: 486 QVNDAVEIVEKMPM---EPDAIVWGSLL-GACR 514
+ A + ++M P +GSLL G C+
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/455 (19%), Positives = 202/455 (44%), Gaps = 48/455 (10%)
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWR 138
+++ GM+ G KNG + EA + + M ++V++++++ G+ + G + A+ + R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 139 M----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGR 190
+ N + ++ ++ + +++A ++++ M + +D ++ C+ G+
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 191 LEEA----RALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV-------S 239
+ EA R + + N V++ +++GY + K F V E +V +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE---GLKAFSVFDEMTKVGHHPTFFT 620
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRAKAVFEKMR 295
+ ++L G G +REA +F ++ P V N ++ G++ +A ++F +M
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 296 ER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
+R D T++++I RKG + A+ LFA+ E A
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK---EAEARGNVLPNKVMYTCFVDGMFK 736
Query: 352 HGRQVHARLVRSEFDQ-----DLYVASALITMYVKCGDLVRAKWIF----NRYPLKDVVM 402
G+ R + D D+ +A+I Y + G + + + N+ ++
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+N ++ GYS+ + ++R + L+G+ PD ++ ++ S ++ G +I ++
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
C+ VE + ++ G++N A ++V+ M
Sbjct: 857 CR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 209/455 (45%), Gaps = 77/455 (16%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T + ++ Y +I +A + D+ + T ++ ++ F ++ +AV L +
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNV 129
++ N+V++ +V+G K G + A + + M NVV +++++ + +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 130 EEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLF-DMMPVK---DVVAVTNM 181
++A LF M K NV++++ ++ L R DA +L DM+ K +VV +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
I + +EG+L EA L+DEM KR ++ T++++++G+ + R+D A+ +FE+M +
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKA 289
N V++ ++ G+ + R+ E E F M V V +I GF D D A+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 290 VFEKMRERDDG------TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
VF++M DG T++ ++ + G +A+ +F +QR
Sbjct: 457 VFKQMVS--DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR---------------- 498
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----D 399
S+ + +Y + +I K G + +F LK D
Sbjct: 499 -------------------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
V+++N+MI+G+ + GL EEA +FR M G PD
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 226/505 (44%), Gaps = 76/505 (15%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAMP 109
+N +++A + + ++L E N+ ++N +++ F + ++ A + M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 110 VR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVE 161
++V+ +S++ GY + +A L +M E + +++T ++ GL ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMV 213
+A L D M + ++V ++ G C+ G ++ A L ++M + NVV ++T++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 214 SGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM---PVK 266
+ R D A LF M + N +++++++ + R +AS M +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 267 P-VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGL 321
P VV N +I F +G + A+ ++++M +R D T+S++I GF +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-----GFCMH---- 378
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
D + + ++ + ++ + LI + K
Sbjct: 379 --------------------------DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 382 CGDLVRAKWIF----NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
+ +F R + + V + ++I G+ Q + A VF+ M GV P+ ++
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
+ +L +GK+++ +FE ++ + ++EP I Y M++ + +AG+V D ++ +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 498 PM---EPDAIVWGSLL-GACRTHMK 518
+ +PD I++ +++ G CR +K
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLK 556
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 207/473 (43%), Gaps = 35/473 (7%)
Query: 116 WTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLK----DSRVEDARKLF 167
+ ++R + +++A LF M P ++ + +L + K D + K+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 168 DMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVD 223
+ ++ +I +C ++ A AL +M K ++VT +++++GY +R+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 224 VARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMI 275
A L + M E + +++T ++ G + EA D M +P +V ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 276 MGFGFDGDVDRAKAVFEKMR----ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
G GD+D A + KM E + +S +I + E +AL LF M+ +G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 332 LNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI 391
N ++ + ++ + + ++ +ALI +VK G LV A+ +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 392 FN----RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
++ R D+ ++S+I G+ H +EA ++F M P+ +++ +++
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAI 504
+ ++ EG E+F M + V + Y ++ +A ++A + ++M + P+ +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 505 VWGSLLGACRTHMKLDLAEVAVEKL--AQLEPKNAGPYVLLSHMYASKGRWED 555
+ +LL + KL+ A V E L +++EP +++ M G+ ED
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVED 523
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/537 (20%), Positives = 241/537 (44%), Gaps = 68/537 (12%)
Query: 14 QVRFQCTSTGAISRYARIGQIENARKVFD------ETPHIHRTTSSWNAMVAAYFQAHQP 67
++ C ++G+IS +G + R V E+ ++ + + + Y ++
Sbjct: 29 KLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGN 88
Query: 68 HQAVTLFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGY 123
++ + +++ S N + V+ G + E + + M V +++ T+++RG+
Sbjct: 89 GHYSSVNSSFALEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGF 147
Query: 124 VQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK-DVVAV 178
+ G +A ++ + +V+++ VM+ G K + +A + D M V DVV
Sbjct: 148 CRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTY 207
Query: 179 TNMIGGYCEEGRLEEARALFDEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVMPE 234
++ C+ G+L++A + D M +R+ V+T+T ++ R+ V A KL + M +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 235 R----NEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGD-VD 285
R + V++ ++ G GR+ EA +F + MP +P V+ N ++ G +D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 286 RAKAVFEKMRERDDG---TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
K + + +R+ T++ +I RKG A+ + +M + G N
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN--------- 378
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM 402
+ +H + D+ + +++ YP D+V
Sbjct: 379 ------SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--------------YP--DIVT 416
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+N+M+T + G E+A+ + + G P I++ V+ + +GK + ++ + M+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEI---VEKMPMEPDAIVWGS-LLGACRT 515
K ++P Y+ +V L R G+V++A++ E+M + P+A+ + S +LG C++
Sbjct: 477 AK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 205/480 (42%), Gaps = 43/480 (8%)
Query: 21 STGAISRYARIGQIENARKVFDE------TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF 74
S + + R G++E K + P I T+ ++ + + + +A +
Sbjct: 105 SNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRLGKTRKAAKIL 160
Query: 75 E----TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR-NVVSWTSMVRGYVQEGNV 129
E + +++++N M+SG+ K G + A V D M V +VV++ +++R G +
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 130 EEAERLFWRMPEKN----VVSWTVMLGGLLKDSRVEDARKLFDMM----PVKDVVAVTNM 181
++A + RM +++ V+++T+++ +DS V A KL D M DVV +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
+ G C+EGRL+EA ++MP NV+T ++ R A KL M +
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKA 289
+ V++ ++ G + A + + MP +P ++ N ++ GF + +DRA
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 290 VFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
E+M R D T++ M+ + G +A+ + ++ +G +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP----LKDVV 401
++ + + D S+L+ + G + A F+ + + V
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+NS++ G + + A++ M G P++ S+ ++ +Y G KE E+ +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 29/333 (8%)
Query: 250 SGRMREASEFFDAM----PVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGT 301
+G + E +F + M V ++ C +I GF G +A + E + D T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
++ MI Y + G AL + RM + + +V R++
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTY---NTILRSLCDSGKLKQAMEVLDRML 231
Query: 362 RSEFDQDLYVASALITMYVKCGDLVRAKWIFN----RYPLKDVVMWNSMITGYSQHGLGE 417
+ + D+ + LI + + A + + R DVV +N ++ G + G +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 418 EALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACM 477
EA+ DM SG P+ I+ +L + +G+ + ++ M + P + + +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNIL 350
Query: 478 VDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLE 533
++ L R G + A++I+EKMP +P+++ + LL G C+ K+D A+E L ++
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK-EKKMDR---AIEYLERMV 406
Query: 534 PKNAGP----YVLLSHMYASKGRWED-VEVVRE 561
+ P Y + G+ ED VE++ +
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 209/466 (44%), Gaps = 39/466 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPE----KNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
+ N+++ + ++ +AV L + E + V++ +V G ++ +EA + + M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 109 PVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRV 160
V+ ++V++ +++ G + G + A L +M E +VV ++ ++ L K V
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 161 EDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
+DA LF M K DV +++I C GR +A L +M +R NVVT+ ++
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKP- 267
+ +A+ ++ A KLF+ M +R N V++ +++ G+ R+ EA + F M K
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 268 ---VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALG 320
VV N +I GF V +F M R + T++ +I + + A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
+F +M +G N + V L +S+ + D+Y + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 381 KCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
K G + +F LK DV+ +N+MI+G+ + GL EEA +F M G PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 437 SFIGVLSACSYSGKVKEGREIFESMK-CKYQVEPGIEHYACMVDLL 481
++ ++ A G E+ + M+ C++ + Y + D+L
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST--YGLVTDML 600
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 222/510 (43%), Gaps = 57/510 (11%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLF 136
N+ ++N M++ + ++ A + M ++V+ S++ G+ + EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 137 WRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEE 188
+M E + V++T ++ GL + ++ +A L + M VK D+V +I G C+
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 189 GRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSW 240
G + A L ++M K +VV ++T++ + R VD A LF M + + ++
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG 300
++++ + GR +AS M E+ +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDM---------------------------LERKINPNVV 311
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
T++++I + ++G +EA LF M + N D +Q+ +
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFN----RYPLKDVVMWNSMITGYSQHGLG 416
V + D+ + LI + K +V +F R + + V + ++I G+ Q
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYAC 476
+ A VF+ M GV P+ +++ +L +GK+++ +FE ++ K ++EP I Y
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-KSKMEPDIYTYNI 490
Query: 477 MVDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQL 532
M + + +AG+V D ++ + + +PD I + +++ G C+ +K + + ++
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 533 EPKNAGPYVLLSHMYASKG-RWEDVEVVRE 561
++G Y L + G + E+++E
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 198/460 (43%), Gaps = 35/460 (7%)
Query: 129 VEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTN 180
++EA LF M P ++V ++ +L + K + + + M + ++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 181 MIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER- 235
MI C +L A A+ +M K ++VT ++++G+ R+ A L + M E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 236 ---NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAK 288
+ V++T ++ G + EA + M VK +V +I G G+ D A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 289 AVFEKMR----ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
+ KM E D +S +I + +AL LF M +G +
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN----RYPLKDV 400
++ + ++ + + ++ ++LI + K G L+ A+ +F+ R ++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
V +NS+I G+ H +EA +F M PD +++ +++ + KV +G E+F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 461 MKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGACRTHM 517
M + V + Y ++ +A ++A + ++M + P+ + + +LL +
Sbjct: 406 MSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 518 KLDLAEVAVEKL--AQLEPKNAGPYVLLSHMYASKGRWED 555
KL+ A V E L +++EP + Y ++S G+ ED
Sbjct: 465 KLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVED 503
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 156/710 (21%), Positives = 291/710 (40%), Gaps = 171/710 (24%)
Query: 17 FQCTSTGAISRYARIGQIENARKVFD---ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTL 73
F C++ IS + +IG+ E A F+ ++ + ++ +V+A Q + + L
Sbjct: 172 FVCSA--VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 74 FETTPEK----NIVSWNGMVSGFVKNGMVAEA----RRVFDAMPVRNVVSWTSMVRGYVQ 125
++ + V ++ + G+ K G + +A R + + R+VVS++ ++ G +
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 126 EGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMM-----PVKDVV 176
EGNVEEA L +M E N++++T ++ GL K ++E+A LF+ + V + +
Sbjct: 290 EGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL 349
Query: 177 AVTNMIGGYCEEGRLEEARALFDEMPKR-------------------------------- 204
VT +I G C +G L A ++ +M +R
Sbjct: 350 YVT-LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV 408
Query: 205 --NVVTWTTMVSGYARNRRVDV-----------------------------------ARK 227
+V+T++T++ Y + + +D A
Sbjct: 409 VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADA 468
Query: 228 LFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAM---PVKPVVACNEMIMGFGF 280
L+ MPE + ++ M+ GY +G++ EA E F+ + V V N +I
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCK 528
Query: 281 DGDVDRAKAVFEKMRER---------------------DDGTW----------------- 302
G +D A V ++ E+ D G
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGM 588
Query: 303 --SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
A++ + +R FE A+ ++ M+R+G + FP D+ R + A L
Sbjct: 589 LNDAILLLCKRGSFE-AAIEVYMIMRRKGLTVTFPSTILKTLV-------DNLRSLDAYL 640
Query: 361 V------RSEFDQDLYVASALITMYVKCGDLVRA----KWIFNRYPLKDVVMWNSMITGY 410
+ + D+ + +I K G LV+A + +R + + +NS+I G
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
Q G EAL +F + G+ P ++++ ++ G + ++ +SM K V P
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV-PN 759
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLL-GACRTHMKLDLAEVAV 526
I Y +VD + GQ DA+ +V + M PDA S++ G C+ K D+ E A+
Sbjct: 760 IIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK---KGDMEE-AL 815
Query: 527 EKLAQLEPKNAGP----YVLLSHMYASKGRWEDVE-VVREKIKTRSVIKL 571
+ + KN ++ L + +KGR E+ ++RE + + SV+KL
Sbjct: 816 SVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKL 865
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 192/470 (40%), Gaps = 88/470 (18%)
Query: 50 TTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI------VSWNGMVSGFVKNGMVAEARR 103
++ ++ +++ + + + A+ + E KN+ + ++SGF K G A
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 104 VFDA-----MPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV-------VSWT--V 149
F++ + V N+V++T++V Q G V+E L R+ ++ +W
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 150 MLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTW 209
GG L D+ ++D R++ + +DVV+ + +I G +EG +EEA L +M K V
Sbjct: 253 FKGGALVDALMQD-REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV--- 308
Query: 210 TTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
E N +++TA++ G G++ EA F+
Sbjct: 309 ------------------------EPNLITYTAIIRGLCKMGKLEEAFVLFNR------- 337
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
I+ G E D+ + +I RKG A + M++ G
Sbjct: 338 -----ILSVGI---------------EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG 377
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDL---- 385
P GR A V D+ S L+ Y+K ++
Sbjct: 378 IQ---PSILTYNTVINGLCMA--GRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 386 -VRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
+R +++ + P+ D+VM N ++ + G EA ++R M + PD ++ ++
Sbjct: 433 EIRRRFLEAKIPM-DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 445 CSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
+G+++E E+F ++ K V + Y ++D L + G ++ A E++
Sbjct: 492 YCKTGQIEEALEMFNELR-KSSVSAAV-CYNRIIDALCKKGMLDTATEVL 539
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 41/285 (14%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTS--SWNAMVAAYFQAHQPHQAVTLFETT 77
T I+ + G + A ++FD +I S ++ ++ + A L ++
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----SWTSMVRGYVQEGNV 129
K NI+ +N +V G+ K G +A RV + V + +SM++GY ++G++
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 130 EEAERLFWRMPEKNVVS----WTVMLGGLLKDSRVEDARKLF-DMMPVKDVVAVTNMIGG 184
EEA +F +KN+ + + ++ G R+E+AR L +M+ + VV + N +
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDA 871
Query: 185 --------------YCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFE 230
CE+GR+ +A + DE+ + + Y R + ++ + E
Sbjct: 872 ELAESESIRGFLVELCEQGRVPQAIKILDEISS-TIYPSGKNLGSYQRLQFLNDVNE--E 928
Query: 231 VMPERNEV----SWTAMLMGYTHSGRMREASEFFDAMPVKPVVAC 271
+ +++ V S + + SG++ +A+EF V V++C
Sbjct: 929 EIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEF-----VMSVLSC 968
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 274 MIMGFGFDGDVDRAKAVFEKMRER------DDGTWSAMIKVYERKGFELEALGLFARMQR 327
+I F G++D A V E M + D+ SA+I + + G ALG F
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 199
Query: 328 EGAAL-NFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLV 386
G + N D R + RL F+ D S I Y K G LV
Sbjct: 200 SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALV 259
Query: 387 RA----KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
A + + + +DVV ++ +I G S+ G EEAL + M GV P+ I++ ++
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIE----HYACMVDLLGRAGQVNDAVEIV---E 495
GK++E +F + + GIE Y ++D + R G +N A ++ E
Sbjct: 320 RGLCKMGKLEEAFVLFNRI-----LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDME 374
Query: 496 KMPMEPDAIVWGSLL-GAC 513
+ ++P + + +++ G C
Sbjct: 375 QRGIQPSILTYNTVINGLC 393
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 179/362 (49%), Gaps = 47/362 (12%)
Query: 5 YSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDET---PHIHRTTSSWNAMVAAY 61
+ T+R V ++ C S R + N K +ET P+IH ++ ++ +
Sbjct: 320 FPTVRTYTVLIKSLCGS-------ERKSEALNLVKEMEETGIKPNIH----TYTVLIDSL 368
Query: 62 FQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NV 113
+ +A L EK N++++N +++G+ K GM+ +A V + M R N
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 114 VSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDM 169
++ +++GY + NV +A + +M E+ +VV++ ++ G + + A +L +
Sbjct: 429 RTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 170 MP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRR 221
M V D T+MI C+ R+EEA LFD + ++ NVV +T ++ GY + +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 222 VDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAM---PVKPVVACNEM 274
VD A + E M + N +++ A++ G G+++EA+ + M ++P V+ + +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 275 IMG-FGFDGDVDRAKAVFEKM----RERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
++ DGD D A + F++M + D T++ I+ Y R+G L+A + A+M+ G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 330 AA 331
+
Sbjct: 668 VS 669
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 235/556 (42%), Gaps = 66/556 (11%)
Query: 20 TSTGAISRYARIGQIENARKVFDETP--HIHRTTSSWNAMVAAYFQAHQPHQAVTLF--- 74
T T I Y + +++A KVF+E P R ++ ++ A + +A+ LF
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 75 ---ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEG 127
E P + ++ ++ + +EA + M N+ ++T ++ +
Sbjct: 315 KDDECFP--TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 128 NVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVT---- 179
E+A L +M EK NV+++ ++ G K +EDA + ++M + + T
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 180 NMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER 235
+I GYC + + +A + ++M +R +VVT+ +++ G R+ D A +L +M +R
Sbjct: 433 ELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 236 NEV----SWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRA 287
V ++T+M+ S R+ EA + FD++ V P VV +I G+ G VD A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 288 KAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
+ EKM + + T++A+I G EA L +M + G
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----D 399
DH +++ S D + + I Y + G L+ A+ + + D
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS---------------- 443
+ ++S+I GY G A +V + M +G P +F+ ++
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 444 ACSYSGKVKEGR--EIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP--- 498
C+ S ++ E+ E M ++ V P + Y ++ + G + A ++ + M
Sbjct: 732 LCAMSNMMEFDTVVELLEKM-VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 499 -MEPDAIVWGSLLGAC 513
+ P +V+ +LL C
Sbjct: 791 GISPSELVFNALLSCC 806
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/530 (21%), Positives = 232/530 (43%), Gaps = 49/530 (9%)
Query: 25 ISRYARIGQIENARKVFDE------TPHIHRTTSSWNAMVAAYFQ---AHQPHQAVT-LF 74
++ AR G ++ ++V+ E P+I+ ++N MV Y + + +Q V+ +
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIY----TYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPV----RNVVSWTSMVRGYVQEGNVE 130
E + + ++ ++ G+ + + A +VF+ MP+ RN V++T ++ G ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 131 EAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP---VK-DVVAVTNMI 182
EA LF +M + V ++TV++ L R +A L M +K ++ T +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 183 GGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER--- 235
C + + E+AR L +M ++ NV+T+ +++GY + ++ A + E+M R
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 236 -NEVSWTAMLMGYTHSG---RMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVF 291
N ++ ++ GY S M ++ + + VV N +I G G+ D A +
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 292 EKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXX 347
M +R D T+++MI + EA LF ++++G N
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 348 XXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWI---FNRYPLKDVVMWN 404
D + +++ + +ALI G L A + + L+ V +
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 405 S-MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
+ +I + G + A + F+ M SG PD ++ + G++ + ++ M+
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR- 664
Query: 464 KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLL 510
+ V P + Y+ ++ G GQ N A +++++M EP + SL+
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 216/498 (43%), Gaps = 85/498 (17%)
Query: 74 FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGYVQEGNV 129
FE + I +N +++ + G+V E ++V+ M N+ ++ MV GY + GNV
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 130 EEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEG 189
EEA + ++ E GL D T++I GYC+
Sbjct: 235 EEANQYVSKIVE----------AGL-----------------DPDFFTYTSLIMGYCQRK 267
Query: 190 RLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV----SWT 241
L+ A +F+EMP +RN V +T ++ G RR+D A LF M + ++T
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 242 AMLMGYTHSGRMREASEFFDAMP---VKPVV-ACNEMIMGFGFDGDVDRAKAVFEKMRER 297
++ S R EA M +KP + +I ++A+ + +M E+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 298 ----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
+ T++A+I Y ++G +A+ + M+ + N
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN-------------------- 427
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQH 413
+ + L++ +++ A ++ + R L DVV +NS+I G +
Sbjct: 428 TRTYNELIKGYCKSNVHKAMGVLN------------KMLERKVLPDVVTYNSLIDGQCRS 475
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G + A + M G+ PD ++ ++ + S +V+E ++F+S++ K V P +
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVM 534
Query: 474 YACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLDLAEVAVEKLA 530
Y ++D +AG+V++A ++EKM + P+++ + +L+ KL A + EK+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 531 Q--LEPKNAGPYVLLSHM 546
+ L+P + +L+ +
Sbjct: 595 KIGLQPTVSTDTILIHRL 612
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 202/450 (44%), Gaps = 72/450 (16%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVFDAM 108
++N ++ F+ ++ +AV L + K ++V++ +V+G K G + A + M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 109 PVRN----VVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRV 160
VV + +++ NV +A LF M K NVV++ ++ L R
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 161 EDARKLF-DMMPVK---DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
DA +L DM+ K +VV + +I + +EG+L EA L+DEM KR ++ T++++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP---- 264
++G+ + R+D A+ +FE+M + N V++ ++ G+ + R+ E E F M
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALG 320
V V +I GF + D A+ VF++M D T+S ++ G AL
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
+F +QR S+ + D+Y + +I
Sbjct: 488 VFEYLQR-----------------------------------SKMEPDIYTYNIMIEGMC 512
Query: 381 KCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
K G + +F LK +VV + +M++G+ + GL EEA +FR+M G PD
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 437 SFIGVLSACSYSGKVKEGREIFESMK-CKY 465
++ ++ A G E+ M+ C++
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 201/471 (42%), Gaps = 66/471 (14%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
E +IV+ N +++GF +++A + M + ++ +++ G + EA
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKD----VVAVTNMIGGYC 186
L RM K ++V++ +++ GL K ++ A L M VV +I C
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
+ +A LF EM + NVVT+ +++ R A +L M ER N V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM 294
+++A++ + G++ EA + +D M + P + + +I GF +D AK +FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 295 RERDDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+D T++ +IK + + E + LF M + G N
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN---------------TV 432
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
+ +H E D V +++ V L D++ ++ ++ G
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGV----------------LPDIMTYSILLDGL 476
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
+G E AL VF + S + PD ++ ++ +GKV++G ++F S+ K V+P
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPN 535
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMK 518
+ Y M+ R G +A + +M E PD+ + +L+ R H++
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI---RAHLR 583
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/424 (18%), Positives = 173/424 (40%), Gaps = 76/424 (17%)
Query: 155 LKDSRVEDARKLF-DMM---PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPK----RNV 206
L D +++DA LF DM+ P +V + ++ + + + +L ++M N+
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 207 VTWTTMVSGYARNRRVDVA----RKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDA 262
T++ +++ + R ++ +A K+ ++ E + V+ ++L G+ H R+ +A
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 263 MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLF 322
M + MG+ + D T++ +I R EA+ L
Sbjct: 177 M----------VEMGY-----------------QPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 323 ARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKC 382
RM +G + +G V+ R + D L + + ++
Sbjct: 210 DRMVVKGCQPDL---------------VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 383 GDLVRAKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVL 442
G VV++N++I + +ALN+F +M G+ P+ +++ ++
Sbjct: 255 G----------------VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 443 SACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PM 499
G+ + + M + ++ P + ++ ++D + G++ +A ++ ++M +
Sbjct: 299 RCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 500 EPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLE--PKNAGPYVLLSHMYASKGRWEDVE 557
+PD + SL+ H +LD A+ E + + P L+ +K E +E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 558 VVRE 561
+ RE
Sbjct: 418 LFRE 421
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 204/446 (45%), Gaps = 36/446 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTL----FETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
+ ++++ Y + + +AV L F T + N V++N ++ G + +EA + D M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 109 PVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRV 160
+ ++V++ +V G + G+ + A L +M E V+ + ++ GL K +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 161 EDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
+DA LF M K +VV +++I C GR +A L +M +R +V T++ +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 213 VSGYARNRRVDVARKLFEVMPERNE----VSWTAMLMGYTHSGRMREASEFFDAMPVK-- 266
+ + + ++ A KL++ M +R+ V++++++ G+ R+ EA + F+ M K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 267 --PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALG 320
VV N +I GF V+ VF +M +R + T++ +I+ + G A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
+F M +G N + V L RS+ + +Y + +I
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 381 KCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
K G + +F LK DVV +N+MI+G+ + G EEA +F++M G P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 437 SFIGVLSACSYSGKVKEGREIFESMK 462
+ ++ A G + E+ + M+
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMR 598
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 226/533 (42%), Gaps = 42/533 (7%)
Query: 70 AVTLF----ETTPEKNIVSWNGMVSGFVK----NGMVAEARRVFDAMPVRNVVSWTSMVR 121
AV LF ++ P +I+ ++ ++S K + +++ ++ + N +++ ++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 122 GYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK---- 173
+ + + A + +M E N+V+ + +L G R+ +A L D M V
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLF 229
+ V +I G + EA AL D M + ++VT+ +V+G + D+A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 230 EVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFD 281
M E + + ++ G M +A F M K VV + +I
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 282 GDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXX 337
G A + M ER D T+SA+I + ++G +EA L+ M + +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 338 XXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF----N 393
D +Q+ +V D+ + LI + K + +F
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 394 RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKE 453
R + + V +N +I G Q G + A +F++M GVPP+ +++ +L +GK+++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 454 GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM---EPDAIVWGSLL 510
+FE ++ + ++EP I Y M++ + +AG+V D ++ + + +PD + + +++
Sbjct: 485 AMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 511 -GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKG-RWEDVEVVRE 561
G CR K + + E N+G Y L G R E+++E
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 203/455 (44%), Gaps = 31/455 (6%)
Query: 137 WRMP-EKNVVSWTVMLGGLLKDSRVEDARKLFD-MMPVK---DVVAVTNMIGGYCEEGRL 191
W++ E + ++++ ++ G + RV +A L D M+ +K D+V V+ +I G C +GR+
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 192 EEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERN----EVSWTAM 243
EA L D M + + VT+ +++ ++ +A LF M ERN V ++ +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 244 LMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER-- 297
+ G +A F+ M +K VV + +I G DG D + +M R
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 298 --DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQ 355
D T+SA+I V+ ++G LEA L+ M G A + Q
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYS 411
+ +V + D+ S LI Y K + +F K + + +N+++ G+
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
Q G A +F++M GVPP +++ +L +G++ + EIFE M+ K ++ GI
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGI 490
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLLGACRTHMKLDLAEVAVEK 528
Y ++ + A +V+DA + + ++PD + + ++G L A++ K
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 529 LAQ--LEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
+ + P + +L+ G VE++ E
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 156/320 (48%), Gaps = 34/320 (10%)
Query: 24 AISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
I + G ++A +F+E I ++++++ + + +N
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 82 I----VSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAE 133
I V+++ ++ FVK G + EA+ +++ M R + +++ S++ G+ +E + EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 134 RLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVT----NMIGGY 185
++F M K ++V++++++ K RV+D +LF + K ++ T ++ G+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 186 CEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV--- 238
C+ G+L A+ LF EM R +VVT+ ++ G N ++ A ++FE M +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 239 -SWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEK 293
+ ++ G ++ ++ +A F ++ VKP VV N MI G G + A +F K
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 294 MRER----DDGTWSAMIKVY 309
M+E DD T++ +I+ +
Sbjct: 551 MKEDGCTPDDFTYNILIRAH 570
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 221/511 (43%), Gaps = 46/511 (9%)
Query: 143 NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALF 198
NV + +M+ L KD ++E + K D+V +I Y +G +EEA L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 199 DEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
+ MP + V T+ T+++G ++ + + A+++F M + ++ ++LM
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 251 GRMREASEFFDAM---PVKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTW 302
G + E + F M V P + C + M+ F G++D+A F ++E D+ +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+ +I+ Y RKG A+ L M ++G A++ ++ +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEE 418
D Y + LI + K G+L A +F + K DVV +N+++ G+ + G +
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
A ++ DM + P IS+ +++A G + E +++ M K ++P + M+
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVMICNSMI 592
Query: 479 DLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQ---- 531
R+G +D +EKM E PD I + +L+ + A V+K+ +
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 532 LEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVIKLPGYSWIEVEKKAHMFVGGDN 591
L P + Y + H + + + ++ EVV K+ R V P S FV DN
Sbjct: 653 LVP-DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN--PDRSTYTCMING--FVSQDN 707
Query: 592 NCHPEQPIIMKMLERLDGLLRDAGYSPDHSF 622
+ I +ML+R G+SPD F
Sbjct: 708 LTEAFR-IHDEMLQR--------GFSPDDKF 729
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 195/447 (43%), Gaps = 38/447 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEKN----IVSWNGMVSGFVKNGMVAEARRVFDAM 108
++N +++AY +A L P K + ++N +++G K+G A+ VF M
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 109 PVRNV----VSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV----SWTVMLGGLLKDSRV 160
+ ++ S++ ++G+V E E++F M ++VV ++ M+ + +
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 161 EDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
+ A F+ + + D V T +I GYC +G + A L +EM ++ +VVT+ T+
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK-- 266
+ G + + + A KLF M ER + + T ++ G+ G ++ A E F M K
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 267 --PVVACNEMIMGFGFDGDVDRAKAVFEKMRERD----DGTWSAMIKVYERKGFELEALG 320
VV N ++ GFG GD+D AK ++ M ++ ++S ++ KG EA
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
++ M + G +++ F D + LI +V
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 381 KCGDLVRAKWIFNRYP------LKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
+ ++ +A + + + DV +NS++ G+ + +EA V R M GV PD
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 435 DISFIGVLSACSYSGKVKEGREIFESM 461
++ +++ + E I + M
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 64/359 (17%)
Query: 176 VAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMPER 235
++++ MI GRL +A++ M +R SG +R V+ F
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRR---------SGVSRLEIVNSLDSTFSNCGSN 164
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVF 291
+ V + ++ Y + ++REA E F + K + ACN +I G V+ A V+
Sbjct: 165 DSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 292 EKMRERDDG----TWSAMIKVYERKGFELEALGLF-ARMQREGAALNFPXXXXXXXXXXX 346
+++ G T + M+ + G ++E +G F +++Q +G +P
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDG-KMEKVGTFLSQVQEKGV---YP----------- 268
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKD----VVM 402
D+ + LI+ Y G + A + N P K V
Sbjct: 269 ---------------------DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+N++I G +HG E A VF +M SG+ PD ++ +L G V E ++F M+
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAV---EIVEKMPMEPDAIVWGSLL-GACRTHM 517
+ V P + ++ M+ L R+G ++ A+ V++ + PD +++ L+ G CR M
Sbjct: 368 SR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 98/197 (49%), Gaps = 20/197 (10%)
Query: 28 YARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNI--- 82
+ ++G I+ A++++ + + I T S++ +V A +A +++ KNI
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 83 -VSWNGMVSGFVKNGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAERLFW 137
+ N M+ G+ ++G ++ + M V + +S+ +++ G+V+E N+ +A L
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 138 RMPEK------NVVSWTVMLGGLLKDSRVEDA----RKLFDMMPVKDVVAVTNMIGGYCE 187
+M E+ +V ++ +L G + +++++A RK+ + D T MI G+
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 188 EGRLEEARALFDEMPKR 204
+ L EA + DEM +R
Sbjct: 705 QDNLTEAFRIHDEMLQR 721
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 175/337 (51%), Gaps = 36/337 (10%)
Query: 32 GQIENARKVFDETPHIHRTTS--SWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSW 85
G ++NA +F+E TT+ ++N ++ + A + L ++ N+V++
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 86 NGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAERLFWRMPE 141
+ ++ FVK G + EA + M R + +++TS++ G+ +E ++++A ++ M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 142 K----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVT----NMIGGYCEEGRLEE 193
K N+ ++ +++ G K +R++D +LF M ++ VVA T +I G+CE G+L
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 194 ARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS-----WTAML 244
A+ LF EM R N+VT+ ++ G N + A ++FE + E++++ + ++
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIII 515
Query: 245 MGYTHSGRMREASEFFDAMP---VKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRER--- 297
G ++ ++ +A + F ++P VKP V N MI G G + A+ +F KM E
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 298 -DDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
D T++ +I+ + G +++ L ++R G +++
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 216/503 (42%), Gaps = 51/503 (10%)
Query: 3 YGYSTLRVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYF 62
Y S + C + R C + A+ + ++G N T +++ ++
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN--------------TITFSTLINGLC 169
Query: 63 QAHQPHQAVTLFETTPE----KNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVV 114
+ +A+ L + E ++++ N +V+G +G AEA + D M N V
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 115 SWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMM 170
++ ++ + G A L +M E+N+ V +++++ GL K +++A LF+ M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 171 PVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRV 222
+K +++ +IGG+C GR ++ L +M KR NVVT++ ++ + + ++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 223 DVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEM 274
A +L + M R + +++T+++ G+ + +A++ D M K + N +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 275 IMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGA 330
I G+ +D +F KM R D T++ +I+ + G A LF M
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 331 ALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW 390
N + ++ ++ +S+ + D+ + + +I + A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 391 IFNRYPLKDVV----MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACS 446
+F PLK V +N MI G + G EA +FR M G PD ++ ++ A
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 447 YSGKVKEGREIFESMK-CKYQVE 468
G + ++ E +K C + V+
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVD 612
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 210/490 (42%), Gaps = 74/490 (15%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
E N ++++ +++G G V+EA + D M ++++ ++V G G EA
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 135 LFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYC 186
L +M E N V++ +L + K + A +L M + D V + +I G C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
+ G L+ A LF+EM + N++T+ ++ G+ R D KL M +R N V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM 294
+++ ++ + G++REA E M + P + +I GF + +D+A + + M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 295 RER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+ + T++ +I Y + + L LF +M G
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV------------------- 435
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF----NRYPLKDVVMWNSM 406
D + LI + + G L AK +F +R ++V + +
Sbjct: 436 ----------------ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
+ G +G E+AL +F + S + D + ++ + KV + ++F S+ K
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-G 538
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLDLAE 523
V+PG++ Y M+ L + G +++A + KM + PD + L+ R H+ A
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI---RAHLGDGDAT 595
Query: 524 VAVEKLAQLE 533
+V+ + +L+
Sbjct: 596 KSVKLIEELK 605
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 219/481 (45%), Gaps = 73/481 (15%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T + ++ Y +I +A + D+ + T ++ ++ F ++ +AV L +
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPV----RNVVSWTSMVRGYVQEGNV 129
++ ++V++ +V+G K G + A + M +VV + +++ G + ++
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 130 EEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLF-DMMPVK---DVVAVTNM 181
++A LF M K +V +++ ++ L R DA +L DM+ K +VV + +
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
I + +EG+L EA L+DEM KR ++ T++++++G+ + R+D A+ +FE+M +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKA 289
N V+++ ++ G+ + R+ E E F M V V +I GF D D A+
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 290 VFEKMRE----RDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
VF++M + T++ ++ + G +A+ +F +QR
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR------------------ 496
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVV 401
S + D+Y + +I K G + +F LK +V+
Sbjct: 497 -----------------STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+N+MI+G+ + G EEA ++ + M G P+ ++ ++ A G + E+ + M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 462 K 462
+
Sbjct: 600 R 600
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 144/287 (50%), Gaps = 28/287 (9%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGN 128
+ E N+V+++ ++ FVK G + EA +++D M R ++ +++S++ G+
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 129 VEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTN 180
++EA+ +F M K NVV+++ ++ G K RVE+ +LF M V + V T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 181 MIGGYCEEGRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVMP--- 233
+I G+ + + A+ +F +M N++T+ ++ G +N ++ A +FE +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 234 -ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAK 288
E + ++ M+ G +G++ + E F + +K V+A N MI GF G + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 289 AVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
++ +KM+E + GT++ +I+ R G + L M+ G A
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 209/465 (44%), Gaps = 63/465 (13%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
E +IV+ + +++G+ + +++A + D M + ++T+++ G EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYC 186
L +M ++ ++V++ ++ GL K ++ A L M DVV +I G C
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
+ +++A LF EM + +V T+++++S R A +L M ER N V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM 294
+++A++ + G++ EA + +D M + P + + +I GF +D AK +FE M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 295 RERDDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+D T+S +IK + + E + LF M + G N
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN---------------TV 434
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGY 410
+ +H + D V ++++ V +P +++ +N ++ G
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGV--------------HP--NILTYNILLDGL 478
Query: 411 SQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPG 470
++G +A+ VF + S + PD ++ ++ +GKV++G E+F ++ K V P
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPN 537
Query: 471 IEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGA 512
+ Y M+ R G +A +++KM + P++ + +L+ A
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 209/506 (41%), Gaps = 74/506 (14%)
Query: 129 VEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTN 180
V++A LF M P ++V + +L + K ++ E L + M D+ +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 181 MIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER- 235
I +C +L A A+ +M K ++VT +++++GY ++R+ A L + M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 236 ---NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAK 288
+ ++T ++ G + EA D M + +V ++ G GD+D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 289 AVFEKMR----ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
++ +KM E D ++ +I + +AL LF M +G +
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN----RYPLKDV 400
++ + ++ + + ++ SALI +VK G LV A+ +++ R D+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 401 VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFES 460
++S+I G+ H +EA ++F M P+ +++ ++ + +V+EG E+F
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 461 MKCK----------------YQ------------------VEPGIEHYACMVDLLGRAGQ 486
M + +Q V P I Y ++D L + G+
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 487 VNDAV---EIVEKMPMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVL 542
+ A+ E +++ MEPD + ++ G C+ E E L K P V+
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----VEDGWELFCNLSLKGVSPNVI 539
Query: 543 LSHM----YASKGRWEDVEVVREKIK 564
+ + KG E+ + + +K+K
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMK 565
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 169/348 (48%), Gaps = 34/348 (9%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTSS--WNAMVAAYFQAHQPHQAVTLFETT 77
T ++ + R ++ +A +FD+ + + +N ++ ++ Q A+ L
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 78 PEKNI----VSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNV 129
+ I V++N ++SG +G ++A R+ M R +V ++ +++ V+EG V
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 130 EEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNM 181
EAE + M + ++V++++++ GL SR+++A ++F M K DVV + +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 182 IGGYCEEGRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRVDVARKLFEVM----P 233
I GYC+ ++E LF EM + RN VT+T ++ GY R +++VA ++F M
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 234 ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKA 289
N +++ +L G +G++ +A M +V N +I G G+V A
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 290 VFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
++ + + D T++ M+ +KG EA LF +M+ +G N
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 191/457 (41%), Gaps = 68/457 (14%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDETPH---------IHRTTSSWNAMVAAYFQAHQPH 68
QC +I+ ++R+ + K +D + I + N ++ + + Q
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 69 QAVT----LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM------PVRNVVSWTS 118
A++ + + E +IV++ +++GF + V +A +FD M P NVV + +
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP--NVVIYNT 191
Query: 119 MVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK- 173
++ G + V+ A L RM + +VV++ ++ GL R DA ++ M +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 174 ---DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVAR 226
DV +I +EGR+ EA ++EM +R ++VT++ ++ G R+D A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 227 KLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDG 282
++F M + + V+++ ++ GY S ++ + F M + VV
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV------------- 358
Query: 283 DVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXX 342
R+ T++ +I+ Y R G A +F RM G N
Sbjct: 359 --------------RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 343 XXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK---- 398
+ + A + ++ D D+ + +I K G++ A I+ +
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
D+ + +M+ G + GL EA +FR M G+ P++
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 171/382 (44%), Gaps = 31/382 (8%)
Query: 143 NVVSWTVMLGGLLKDSRVEDAR----KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALF 198
N+ + ++L + S++ A K+ + +V +++ G+C R+ +A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 199 DEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
D+M K NVV + T++ G ++++VD A L M + + V++ +++ G S
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 251 GRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTW 302
GR +A+ M + P V N +I +G V A+ +E+M R D T+
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 303 SAMIK---VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
S +I +Y R EA +F M +G + +HG ++
Sbjct: 295 SLLIYGLCMYSRLD---EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL----KDVVMWNSMITGYSQHGL 415
+ + ++ + LI Y + G L A+ IF R +++ +N ++ G +G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 416 GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA 475
E+AL + DM +G+ D +++ ++ +G+V + +I+ S+ C+ + P I Y
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ-GLMPDIWTYT 470
Query: 476 CMVDLLGRAGQVNDAVEIVEKM 497
M+ L + G +A + KM
Sbjct: 471 TMMLGLYKKGLRREADALFRKM 492
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 176/426 (41%), Gaps = 64/426 (15%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLF 136
N+ + N +++ F + ++ A M ++V++ S++ G+ + V +A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 137 WRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEE 188
+M + NVV + ++ GL K +V++A L + M DVV ++I G C
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 189 GRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSW 240
GR +A + M KR +V T+ ++ + RV A + +E M R + V++
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 241 TAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRE 296
+ ++ G R+ EA E F M K VV + +I G+ V+ +F +M +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 297 R----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH 352
R + T++ +I+ Y R G A +F RM G N D+
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI-----ITYNVLLHGLCDN 409
Query: 353 GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVMWNSMITGYSQ 412
G+ A ++ ++ ++ A D+V +N +I G +
Sbjct: 410 GKIEKALVILADMQKNGMDA--------------------------DIVTYNIIIRGMCK 443
Query: 413 HGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIE 472
G +A +++ + G+ PD ++ ++ G +E +F MK E GI
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK-----EDGIL 498
Query: 473 HYACMV 478
C V
Sbjct: 499 PNECYV 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
DVV +NS+I+G G +A + M + PD +F ++ AC G+V E E +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLL-GACR 514
E M + ++P I Y+ ++ L ++++A E+ M + PD + + L+ G C+
Sbjct: 280 EEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVE 557
+ ++ E + +N Y +L Y G+ E
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 157/331 (47%), Gaps = 30/331 (9%)
Query: 29 ARIGQIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----NI 82
++G ++A + E HI ++A++ + A LF EK N+
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWR 138
++N M+ GF G ++A+R+ M R +V+++ +++ V+EG + EAE+L
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 139 MPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
M + + V++ M+ G K +R +DA+ +FD+M DVV +I YC R++E
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 195 RALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG 246
L E+ +R N T+ T++ G+ ++ A+ LF+ M + ++ +L G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 247 YTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMR----ERD 298
+ + ++ EA E F+ + + + VA N +I G VD A +F + E D
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREG 329
T++ MI + K +A LF +M+ G
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 210/494 (42%), Gaps = 52/494 (10%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
S+N ++ + H+ +++ F + ++V++N ++ G ++EA +F M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 109 ---------------------PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----N 143
PV V+++ +++ G EG V EA L +M K +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDMMP---VK-DVVAVTNMIGGYCEEGRLEEARALFD 199
VV++ ++ G+ K + A L M +K DVV + +I C++G +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 200 EMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSG 251
EM ++ NV T+ M+ G+ R A++L M ER + +++ A++ G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 252 RMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
++ EA + D M + + V N MI GF D AK +F+ M D T++ +I
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ 367
VY R E + L + R G N + + + ++
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 368 DLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVF 423
D + L+ + + L A +F + D V +N +I G + +EA ++F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+ + GV PD ++ ++S + + +F MK EP Y ++ +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLK 619
Query: 484 AGQVNDAVEIVEKM 497
AG+++ ++E++ +M
Sbjct: 620 AGEIDKSIELISEM 633
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 34/427 (7%)
Query: 69 QAVTLFETTPEKN----IVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMV 120
+AV LF+ E ++++N +++G G V EA + + M + +VV++ ++V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 121 RGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--- 173
G + G+ + A L +M E +VV ++ ++ L KD DA+ LF M K
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 174 -DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKL 228
+V MI G+C GR +A+ L +M +R +V+T+ ++S + ++ A KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 229 FEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV 284
+ M R + V++ +M+ G+ R +A FD M VV N +I + V
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 285 DRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
D + ++ R + T++ +I + A LF M G +
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW-IFNRYPLK- 398
+ ++ + S+ D D + +I K G V W +F P+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCSLPIHG 567
Query: 399 ---DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
DV +N MI+G+ +A +F M +G PD+ ++ ++ C +G++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 456 EIFESMK 462
E+ M+
Sbjct: 628 ELISEMR 634
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 162/398 (40%), Gaps = 78/398 (19%)
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEAR 195
P V ++G ++ +R + A L+ M ++ ++ + +I +C+ +L +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 196 ALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSG 251
+ F ++ K +VVT+ T++ G R+ A LF M E T L
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE------TGFL------- 208
Query: 252 RMREASEFFDAM---PVKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWS 303
EA FD M + PVV N +I G +G V A A+ KM + D T+
Sbjct: 209 ---EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
++ + G AL L ++M+ + H +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKME----------------------------ETHIK---- 293
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEA 419
D+ + SA+I K G A+++F+ K +V +N MI G+ G +A
Sbjct: 294 ---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 420 LNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM--KCKYQVEPGIEHYACM 477
+ RDM + PD ++F ++SA GK+ E ++ + M +C + P Y M
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF---PDTVTYNSM 407
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA-CR 514
+ + + +DA + + M PD + + +++ CR
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMA-SPDVVTFNTIIDVYCR 444
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 156/304 (51%), Gaps = 29/304 (9%)
Query: 55 NAMVAAYFQAHQPHQAVTLFETTPE----KNIVSWNGMVSGFVKNGMVAEARRVFDAMP- 109
++++ + Q ++ A+ L E ++V +N ++ G K G+V +A +FD M
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 110 --VR-NVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVED 162
VR + V++ S+V G G +A RL M + NV+++T ++ +K+ + +
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 163 ARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVS 214
A KL++ M + DV ++I G C GR++EA+ + D M + +VVT+ T+++
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 215 GYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVA 270
G+ +++RVD KLF M +R + +++ ++ GY +GR A E F M +P +
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 271 CNEMIM-GFGFDGDVDRAKAVFEKMR----ERDDGTWSAMIKVYERKGFELEALGLFARM 325
+++ G + V++A +FE M+ E D T++ +I + G +A LF +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 326 QREG 329
+G
Sbjct: 443 SCKG 446
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 156/305 (51%), Gaps = 29/305 (9%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNI----VSWNGMVSGFVKNGMVAEARRVFDAMP 109
+N ++ + + AV LF+ + V++N +V+G +G ++A R+ M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 110 VR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVE 161
+R NV+++T+++ +V+EG EA +L+ M + +V ++ ++ GL RV+
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMV 213
+A+++ D+M K DVV +I G+C+ R++E LF EM +R +V T+ T++
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 214 SGYARNRRVDVARKLFEVMPERNEV-SWTAMLMGYTHSGRMREASEFFDAMPVK----PV 268
GY + R D A+++F M R + +++ +L G + R+ +A F+ M +
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 269 VACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFAR 324
N +I G G+V+ A +F + + D +++ MI + RK ++ L+ +
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 325 MQREG 329
MQ +G
Sbjct: 477 MQEDG 481
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 197/480 (41%), Gaps = 79/480 (16%)
Query: 128 NVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVT 179
N+EE LF +M P ++V ++ +L + K + LF M V D+ +
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 180 NMIGGYCEEGRLEEARALFDEMPK----RNVVTWTTMVSGYARNRRV----DVARKLFEV 231
+I C R A ++ +M K +VVT +++++G+ + RV D+ K+ E+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 232 MPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRA 287
+ V + ++ G G + +A E FD M V V N ++ G G A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 288 KAVFEKMRERDDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
+ M RD T++A+I V+ ++G EA+ L+ M R
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV------------- 275
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFN----RYPLKD 399
D D++ ++LI G + AK + + + L D
Sbjct: 276 ----------------------DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 400 VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFE 459
VV +N++I G+ + +E +FR+M G+ D I++ ++ +G+ +EIF
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 460 SMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLL-GACRT 515
M + P I Y+ ++ L +V A+ + E M +E D + ++ G C
Sbjct: 374 RMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC-- 427
Query: 516 HMKLDLAEVAVEKLAQLEPKNAGP----YVLLSHMYASKGRWEDVEVVREKIKTRSVIKL 571
K+ E A + L K P Y + + K +W+ +++ K++ ++ L
Sbjct: 428 --KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 122/261 (46%), Gaps = 44/261 (16%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVFDAM 108
++ A++ + + + +A+ L+E + ++ ++N +++G +G V EA+++ D M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 109 PVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVSWTVMLGGLLKDSRVEDAR 164
+ +VV++ +++ G+ + V+E +LF M ++ +V
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG------------------ 347
Query: 165 KLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-NVVTWTTMVSGYARNRRVD 223
D + +I GY + GR + A+ +F M R N+ T++ ++ G N RV+
Sbjct: 348 ---------DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 224 VARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMI 275
A LFE M E + ++ ++ G G + +A + F ++ K VV+ MI
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 276 MGFGFDGDVDRAKAVFEKMRE 296
GF D++ ++ KM+E
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQE 479
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 208/494 (42%), Gaps = 52/494 (10%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
S+N ++ + H+ +++ F + ++V++N ++ G ++EA +F M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 109 ---------------------PVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----N 143
PV V+++ +++ G EG V EA L +M K +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 144 VVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFD 199
VV++ ++ G+ K + A L M DVV + +I C++G +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 200 EMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSG 251
EM ++ NV T+ M+ G+ R A++L M ER + +++ A++ G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 252 RMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIK 307
++ EA + D M + + V N MI GF D AK +F+ M D T++ +I
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 308 VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ 367
VY R E + L + R G N + + + ++
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 368 DLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVF 423
D + L+ + + L A +F + D V +N +I G + +EA ++F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 424 RDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGR 483
+ + GV PD ++ ++S + + +F MK EP Y ++ +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLK 619
Query: 484 AGQVNDAVEIVEKM 497
AG+++ ++E++ +M
Sbjct: 620 AGEIDKSIELISEM 633
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 157/331 (47%), Gaps = 30/331 (9%)
Query: 29 ARIGQIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----NI 82
++G ++A + E HI ++A++ + A LF EK N+
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWR 138
++N M+ GF G ++A+R+ M R +V+++ +++ V+EG + EAE+L
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 139 MPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEA 194
M + + V++ M+ G K +R +DA+ +FD+M DVV +I YC R++E
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 195 RALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG 246
L E+ +R N T+ T++ G+ ++ A+ LF+ M + ++ +L G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 247 YTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMR----ERD 298
+ + ++ EA E F+ + + + VA N +I G VD A +F + E D
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREG 329
T++ MI + K +A LF +M+ G
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 34/427 (7%)
Query: 69 QAVTLFETTPEKN----IVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMV 120
+AV LF+ E ++++N +++G G V EA + + M + +VV++ ++V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 121 RGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK--- 173
G + G+ + A L +M E +VV ++ ++ L KD DA+ LF M K
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 174 -DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKL 228
+V MI G+C GR +A+ L +M +R +V+T+ ++S + ++ A KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 229 FEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDV 284
+ M R + V++ +M+ G+ R +A FD M VV N +I + V
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 285 DRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXX 340
D + ++ R + T++ +I + A LF M G +
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 341 XXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKW-IFNRYPLK- 398
+ ++ + S+ D D + +I K G V W +F P+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCSLPIHG 567
Query: 399 ---DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGR 455
DV +N MI+G+ +A +F M +G PD+ ++ ++ C +G++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 456 EIFESMK 462
E+ M+
Sbjct: 628 ELISEMR 634
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 162/398 (40%), Gaps = 78/398 (19%)
Query: 140 PEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEAR 195
P V ++G ++ +R + A L+ M ++ ++ + +I +C+ +L +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 196 ALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSG 251
+ F ++ K +VVT+ T++ G R+ A LF M E T L
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE------TGFL------- 208
Query: 252 RMREASEFFDAM---PVKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWS 303
EA FD M + PVV N +I G +G V A A+ KM + D T+
Sbjct: 209 ---EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 304 AMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRS 363
++ + G AL L ++M+ + H +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKME----------------------------ETHIK---- 293
Query: 364 EFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEA 419
D+ + SA+I K G A+++F+ K +V +N MI G+ G +A
Sbjct: 294 ---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 420 LNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM--KCKYQVEPGIEHYACM 477
+ RDM + PD ++F ++SA GK+ E ++ + M +C + P Y M
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF---PDTVTYNSM 407
Query: 478 VDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLLGA-CR 514
+ + + +DA + + M PD + + +++ CR
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMA-SPDVVTFNTIIDVYCR 444
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 230/523 (43%), Gaps = 84/523 (16%)
Query: 22 TGAISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQA----VTLFE 75
T I + + + +A +V E I +N+++ +A + +A V + E
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 76 TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGYVQEGNVEE 131
+ N ++ +SG+++ A A + M + N V T ++ Y ++G V E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 132 AERLFWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIG 183
A + M ++ ++ ++TV++ GL K+ +V+DA ++F M K DV + +I
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER---- 235
G+ + G +++A ++FDEM + NV+ + ++ G+ R+ ++ A++L + M +
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDG-----DVDRAKAV 290
N V++ ++ GY SG + EA FD M +K +V + + DG DV+RA +
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERAITI 754
Query: 291 F---EKMRERDDGTWSAMIK-VYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
F +K ++A+I V++ F + + + LN
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFK-----------FGKTELKTEVLN------------- 790
Query: 347 XXXXDHGRQVHARLVRSEFDQ----DLYVASALITMYVKCGDLVRAKWIF----NRYPLK 398
RL+ FD+ + + +I K G+L AK +F N +
Sbjct: 791 ------------RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
V+ + S++ GY + G E VF + +G+ PD I + +++A G + +
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 459 ESMKCKYQVEPG----IEHYACMVDLLGRAGQVNDAVEIVEKM 497
+ M K V+ G I ++ + G++ A +++E M
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/537 (21%), Positives = 225/537 (41%), Gaps = 63/537 (11%)
Query: 25 ISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV- 83
I + R G ++ + V +T RT + A+ L E+ K +V
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTAT------------LNVDGALKLKESMICKGLVP 275
Query: 84 ---SWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----SWTSMVRGYVQEGNVEEAERLF 136
+++ ++ G K + +A+ + M V +++ ++ G ++ N + A+ L
Sbjct: 276 LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 137 WRMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVKDVV----AVTNMIGGYCEE 188
M + + + + K+ +E A+ LFD M ++ A ++I GYC E
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395
Query: 189 GRLEEARALFDEMPKRNVV----TWTTMVSGYARNRRVDVARKLFEVMPER----NEVSW 240
+ + L EM KRN+V T+ T+V G + +D A + + M N V +
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 455
Query: 241 TAMLMGYTHSGRMREASEFFDAMP---VKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRE 296
T ++ + + R +A M + P + C N +I+G +D A++ +M E
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 297 R----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDH 352
+ T+ A I Y E + + + RE L
Sbjct: 516 NGLKPNAFTYGAFISGYIEAS-EFASADKYVKEMRECGVL----PNKVLCTGLINEYCKK 570
Query: 353 GRQVHA-RLVRSEFDQ----DLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMW 403
G+ + A RS DQ D + L+ K + A+ IF K DV +
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 404 NSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKC 463
+I G+S+ G ++A ++F +M G+ P+ I + +L SG++++ +E+ + M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 464 KYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLL-GACRTH 516
K + P Y ++D ++G + +A + ++M ++ PD+ V+ +L+ G CR +
Sbjct: 691 K-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 202/472 (42%), Gaps = 55/472 (11%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHIHRTTS--SWNAMVAAYFQAHQPHQAVTLFETT 77
T T + + + G IE ARK F+E + T + ++ A++ AY +A + A LFET
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAE 133
+ NIV+++ ++ G K G V +A ++F+ M V M Y ++ + + +E
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM---YFKQYD-DNSE 635
Query: 134 RLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEG 189
R NVV++ +L G K RVE+ARKL D M ++ + + +I G C+ G
Sbjct: 636 R-------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 190 RLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWT 241
+L+EA+ + EM + + T+++++ Y + +R D+A K+ M E N V +T
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 242 AMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
M+ G G+ EA + M K VV MI GFG G ++ + E+M +
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 298 DDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
T+ +I + G AL + + E ++P +
Sbjct: 809 GVAPNYVTYRVLIDHCCKNG----ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF- 863
Query: 354 RQVHARLVRSEFDQD-----LYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM------ 402
+ + + E QD L V LI +K L A + +
Sbjct: 864 --IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEG 454
+NS+I E A +F +M GV P+ SF ++ + K+ E
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 183/409 (44%), Gaps = 34/409 (8%)
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVV----SWTVMLGGLLKDSRVEDARK 165
V N ++ +S R G E+A + M + + +++ +L L S++E A
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 166 LFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPK----RNVVTWTTMVSGYA 217
LF+ M V DV T M+ +C+ G +E+AR F+EM + NVVT+T ++ Y
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 218 RNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNE 273
+ ++V A +LFE M N V+++A++ G+ +G++ +A + F+ M V +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 274 MIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
M +D + +R V T+ A++ + + EA L M EG N
Sbjct: 625 MYFK-QYDDNSERPNVV----------TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 334 FPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY--VKCGDL---VRA 388
D ++V + F LY S+LI Y VK DL V +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 389 KWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYS 448
K + N +VV++ MI G + G +EA + + M G P+ +++ ++
Sbjct: 734 KMLENSCA-PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 449 GKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
GK++ E+ E M K V P Y ++D + G ++ A ++E+M
Sbjct: 793 GKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/550 (17%), Positives = 214/550 (38%), Gaps = 64/550 (11%)
Query: 52 SSWNAMVAAYFQAHQPHQAVTLFETTPEKNI----VSWNGMVSGFVKNGMVAEARRVFDA 107
S++N ++ A+ +A + A + N+ + K G EA + +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 108 MP-VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVED 162
V + V +T ++ G + EEA RM NVV+++ +L G L ++
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 163 ARKLFDMMPVKDVVA----VTNMIGGYCEEGRLEEARALFDEMPK----RNVVTWTTMVS 214
+++ +MM ++ +++ YC G A L +M K V + ++
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 215 GYARNRR------VDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP 264
++ +D+A K + M N+++ ++ +G+ +A M
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 265 VK---PVVACNEMIMGFGFDGD-VDRAKAVFEKMRE----RDDGTWSAMIKVYERKGFEL 316
+ P + ++ + + ++ A +FE+M+ D T++ M+ + + G
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
+A F M+ G N + ++ ++ ++ SALI
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 377 TMYVKCGDLVRAKWIFNR------YPLKD--------------VVMWNSMITGYSQHGLG 416
+ K G + +A IF R P D VV + +++ G+ +
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYAC 476
EEA + M + G P+ I + ++ GK+ E +E+ M ++ + Y+
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSS 714
Query: 477 MVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQL 532
++D + + + A +++ KM P+ +++ ++ G C K+ + A + + +
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC----KVGKTDEAYKLMQMM 770
Query: 533 EPKNAGPYVL 542
E K P V+
Sbjct: 771 EEKGCQPNVV 780
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 204/460 (44%), Gaps = 70/460 (15%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T + ++ Y +I +A + D+ + T ++ ++ F ++ +AV L +
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNV 129
++ ++V++ +V+G K G + A + + M NVV + +++ + +V
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 130 EEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNM 181
E A LF M K NVV++ ++ L R DA +L M K +VV +
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 182 IGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
I + +EG+L EA L +EM +R++ +T+ +++G+ + R+D A+++F+ M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMP----VKPVVACNEMIMGFGFDGDVDRAKA 289
N ++ ++ G+ R+ + E F M V V +I GF GD D A+
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 290 VFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
VF++M D T+S ++ G AL +F +Q+
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK------------------ 496
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK-DVVMWN 404
SE + ++++ + +I K G + A +F +K DVV +N
Sbjct: 497 -----------------SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 405 SMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA 444
+MI+G L +EA ++FR M G P+ ++ ++ A
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 25 ISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK-- 80
I + +E A +F E T I ++N+++ + A L EK
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 81 --NIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGNVEEAER 134
N+V++N ++ F K G + EA ++ + M R++ +++ ++ G+ ++EA++
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYC 186
+F M K N+ ++ ++ G K RVED +LF M V + V T +I G+
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEV 238
+ G + A+ +F +M +++T++ ++ G ++D A +F+ + E N
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+ M+ G +G++ EA + F ++ +KP VV N MI G + A +F KM+E
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 298 ----DDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+ GT++ +I+ R + L M+ G
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/534 (21%), Positives = 238/534 (44%), Gaps = 81/534 (15%)
Query: 26 SRYARIGQIENARKVFDETPHIHRTTS--SWNAMVAAYFQAHQPHQAVTLFETTP----E 79
+R + I ++++A +F + S +N +++A + ++ ++L E
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 80 KNIVSWNGMVSGFVKNGMVAEARRVFDAM------PVRNVVSWTSMVRGYVQEGNVEEAE 133
++ +++ ++ F + ++ A V M P ++V+ +S++ GY + +A
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAV 173
Query: 134 RLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGY 185
L +M E + ++T ++ GL ++ +A L D M + D+V ++ G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 186 CEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NE 237
C+ G ++ A L ++M K NVV + T++ + R V+VA LF M + N
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEK 293
V++ +++ + GR +AS M + P VV N +I F +G + A+ + E+
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 294 MRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXX 349
M +R D T++ +I GF +
Sbjct: 354 MIQRSIDPDTITYNLLIN-----GFCMH------------------------------NR 378
Query: 350 XDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF----NRYPLKDVVMWNS 405
D +Q+ +V + ++ + LI + KC + +F R + + V + +
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 406 MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSA-CSYSGKVKEGREIFESMKCK 464
+I G+ Q G + A VF+ M + VP D +++ +L CSY GK+ IF+ ++ K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY-GKLDTALVIFKYLQ-K 496
Query: 465 YQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPMEPDAIVWGSLL-GACRTHM 517
++E I Y M++ + +AG+V +A ++ + ++PD + + +++ G C +
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRL 550
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 178/429 (41%), Gaps = 29/429 (6%)
Query: 159 RVEDARKLF-DMM---PVKDVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWT 210
+V+DA LF DM+ P +V ++ + + E +L ++M ++ T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 211 TMVSGYARNRRVDVA----RKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDA---M 263
++ + R ++ +A K+ ++ E + V+ +++L GY HS R+ +A D M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 264 PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEA 318
KP +I G A A+ ++M +R D T+ ++ ++G A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
L L +M+ N + + + ++ ++LI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 379 YVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
G A + + K +VV +N++I + + G EA + +M + PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIV 494
I++ +++ ++ E +++F+ M K P I+ Y +++ + +V D VE+
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 495 EKMP---MEPDAIVWGSLLGACRTHMKLDLAEVAVEKL-AQLEPKNAGPYVLLSHMYASK 550
+M + + + + +++ D A++ +++ + P + Y +L H S
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 551 GRWEDVEVV 559
G+ + V+
Sbjct: 482 GKLDTALVI 490
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 192/418 (45%), Gaps = 39/418 (9%)
Query: 53 SWNAMVAAYFQAHQPHQAVT----LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
+ N ++ + Q+ QP+ A + + + E +IV++ +++GF + EA + + M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 109 PVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRV 160
+VV +T+++ + G+V A LF +M +VV +T ++ GL R
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 161 EDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTM 212
DA L M + DV+ +I + +EG+ +A L++EM + N+ T+T++
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 213 VSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV 268
++G+ VD AR++F +M + + V++T+++ G+ ++ +A + F M K +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 269 ----VACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALG 320
+ +I GFG G + A+ VF M R + T++ ++ G +AL
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 321 LFARMQR---EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
+F MQ+ +G A N + V + + E D + + +I
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 378 MYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGV 431
K G + A +F P K +VV + +MI+G + GL EA +FR M GV
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 41/338 (12%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLF 229
D+V T++I G+C R+EEA ++ ++M K +VV +TT++ +N V+ A LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 230 EVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVD 285
+ M + V +T+++ G +SGR R+A M + +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI----------------- 243
Query: 286 RAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXX 345
+ D T++A+I + ++G L+A L+ M R A N
Sbjct: 244 ----------KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 346 XXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVV 401
D RQ+ + D+ ++LI + KC + A IF K + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 402 MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESM 461
+ ++I G+ Q G A VF M GVPP+ ++ +L Y+GKVK+ IFE M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 462 KCKYQ--VEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
+ + V P I Y ++ L G++ A+ + E M
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 174/410 (42%), Gaps = 53/410 (12%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLF 167
++V++TS++ G+ +EEA + +M E +VV +T ++ L K+ V A LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 168 DMMPV----KDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARN 219
D M DVV T+++ G C GR +A +L M KR +V+T+ ++ + +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 220 RRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVAC 271
+ A +L+ M N ++T+++ G+ G + EA + F M K VVA
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQR 327
+I GF VD A +F +M ++ + T++ +I+ + + G A +F+ M
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
G N + + + E D VA + T
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG---VAPNIWT---------- 427
Query: 388 AKWIFNRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSY 447
+N ++ G +G E+AL VF DM + I++ ++
Sbjct: 428 ---------------YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 448 SGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
+GKVK +F S+ K V+P + Y M+ L R G ++A + KM
Sbjct: 473 AGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 20 TSTGAISRYARIGQIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T T I+ + G ++ AR++F ET ++ +++ + + + A+ +F
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 78 PEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNV 129
+K N +++ ++ GF + G A+ VF M R N+ ++ ++ G V
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 130 EEAERLFWRMPEK-------NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAV 178
++A +F M ++ N+ ++ V+L GL + ++E A +F+ M +++ +
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 179 TNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPE 234
T +I G C+ G+++ A LF +P K NVVT+TTM+SG R A LF M E
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 130/242 (53%), Gaps = 24/242 (9%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGYVQEGNVEEAER 134
E N++++ ++ FVK G + EA+ +++ M +V ++ S++ G G ++EA +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVA----VTNMIGGYC 186
+F+ M N V +T ++ G K RVED K+F M K VVA T +I GYC
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
GR + A+ +F++M R ++ T+ ++ G N +V+ A +FE M +R N V
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM 294
++T ++ G G++ +A + F ++ +KP V+ MI GF G + A ++F+KM
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 295 RE 296
+E
Sbjct: 495 KE 496
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 168/348 (48%), Gaps = 34/348 (9%)
Query: 20 TSTGAISRYARIGQIENARKVFDETPHI--HRTTSSWNAMVAAYFQAHQPHQAVTLFETT 77
T T ++ Y +IE+A +FD+ + ++ ++ + + AV LF
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 78 ----PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNV 129
N+V++N +V+G + G +A + M R NV+++T+++ +V+ G +
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 130 EEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNM 181
EA+ L+ M + +V ++ ++ GL +++AR++F +M + V T +
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNE 237
I G+C+ R+E+ +F EM ++ N +T+T ++ GY R DVA+++F M R
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 238 V----SWTAMLMGYTHSGRMREASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRA-- 287
++ +L G +G++ +A F+ M + +V +I G G V+ A
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 288 --KAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALN 333
++F K + + T++ MI + R+G EA LF +M+ +G N
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 189/451 (41%), Gaps = 64/451 (14%)
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRM----PEKNVVSWTVMLGGLLKDSRVEDARK 165
+R S+ ++R + +A LF RM P +++ +T +L + K +R +
Sbjct: 45 IRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVIS 104
Query: 166 LFDMMPV---------------------------------------KDVVAVTNMIGGYC 186
LF+ M + D+V T+++ GYC
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 187 EEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
R+E+A ALFD++ K NVVT+TT++ +NR ++ A +LF M N V
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 239 SWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM 294
++ A++ G GR +A+ M ++P V+ +I F G + AK ++ M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 295 RER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+ D T+ ++I G EA +F M+R G N
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSM 406
+ G ++ + + + + LI Y G A+ +FN+ + D+ +N +
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
+ G +G E+AL +F M + + +++ ++ GKV++ ++F S+ K
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-G 463
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
++P + Y M+ R G +++A + +KM
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 24/346 (6%)
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKLFDM---MPVK-DVVAVTNMIGGYCEEGRLEEARA 196
E ++V++T +L G +R+EDA LFD M K +VV T +I C+ L A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 197 LFDEM----PKRNVVTWTTMVSGYAR-NRRVDVARKLFEVMPER---NEVSWTAMLMGYT 248
LF++M + NVVT+ +V+G R D A L ++M R N +++TA++ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 249 HSGRMREASEFFDA---MPVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDG 300
G++ EA E ++ M V P V +I G G +D A+ +F M ++
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
++ +I + + + + +F M ++G N D ++V ++
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIF----NRYPLKDVVMWNSMITGYSQHGLG 416
D+ + L+ G + +A IF R ++V + +I G + G
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
E+A ++F + G+ P+ I++ ++S G + E +F+ MK
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 160/352 (45%), Gaps = 28/352 (7%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLF 167
++V++TS++ GY +E+A LF ++ + NVV++T ++ L K+ + A +LF
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 168 DMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARN 219
+ M +VV ++ G CE GR +A L +M KR NV+T+T ++ + +
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 220 RRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VAC 271
++ A++L+ VM + + ++ +++ G G + EA + F M V
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 272 NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQR 327
+I GF V+ +F +M ++ + T++ +I+ Y G A +F +M
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
A + + + + + E D ++ + +I K G +
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 388 AKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDD 435
A +F K +V+ + +MI+G+ + GL EA ++F+ M G P++
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 54/433 (12%)
Query: 146 SWTVMLGGLLKDSRVEDARKLFDMM----PVKDVVAVTNMIGGYCEEGRLEEARALFDEM 201
S+ +L L + + DA LF M P+ ++ T ++ + R + +LF++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 202 P---------KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGR 252
N+V +S R K+ ++ E + V++T++L GY H R
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQP-CRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 253 MREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERK 312
+ +A FD I+G GF +V T++ +I+ +
Sbjct: 169 IEDAIALFDQ------------ILGMGFKPNVV---------------TYTTLIRCLCKN 201
Query: 313 GFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA 372
A+ LF +M G+ N + +++ + ++
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 373 SALITMYVKCGDLVRAKWIFN------RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDM 426
+ALI +VK G L+ AK ++N YP DV + S+I G +GL +EA +F M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYP--DVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 427 CLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQ 486
+G P+++ + ++ S +V++G +IF M K V I Y ++ G+
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGR 378
Query: 487 VNDAVEIVEKMPME---PDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEPK-NAGPYVL 542
+ A E+ +M PD + LL + K++ A + E + + E N Y +
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 543 LSHMYASKGRWED 555
+ G+ ED
Sbjct: 439 IIQGMCKLGKVED 451
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 365 FDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEAL 420
F ++ + LI K L A +FN+ +VV +N+++TG + G +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 421 NVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDL 480
+ RDM + P+ I+F ++ A GK+ E +E++ M + V P + Y +++
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYGSLING 302
Query: 481 LGRAGQVNDAVE---IVEKMPMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKN 536
L G +++A + ++E+ P+ +++ +L+ G C++ D ++ E + N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 537 AGPYVLLSHMYASKGRWEDVEVVREKIKTR 566
Y +L Y GR + + V ++ +R
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/548 (20%), Positives = 239/548 (43%), Gaps = 61/548 (11%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNIV----SWNGMVSGFVKNGMVAEARRVFDAMP 109
+N +++A + + ++L E IV ++N +++ F + ++ A + M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 110 VR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVE 161
++V+ +S++ GY + +A L +M E + +++T ++ GL ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMV 213
+A L D M + ++V ++ G C+ G + A L ++M + +VV + T++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 214 SGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
+ R VD A LF+ M + N V++++++ GR +AS+ M
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM------ 321
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
EK + T++A+I + ++G +EA L+ M +
Sbjct: 322 ---------------------IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D +Q+ +V + D+ + LI + K +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 390 WIF----NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
+F +R + D V + ++I G G + A VF+ M GVPPD +++ +L
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM---EPD 502
+GK+++ E+F+ M+ K +++ I Y M++ + +AG+V+D ++ + + +P+
Sbjct: 481 CNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 503 AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP-KNAGPYVLLSHMYASKG-RWEDVEVVR 560
+ + +++ + L A ++K+ + P N+G Y L + G + E++R
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 561 EKIKTRSV 568
E R V
Sbjct: 600 EMRSCRFV 607
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 234/530 (44%), Gaps = 47/530 (8%)
Query: 73 LFETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMVRGYVQEGN 128
+ + P N+V++ +++GF K G + A +F M R + +++++++ GY + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 129 VEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTN 180
+ +LF + K +VV ++ + +K + A ++ M + +VV T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 181 MIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER- 235
+I G C++GR+ EA ++ ++ KR ++VT+++++ G+ + + L+E M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 236 ---NEVSWTAMLMGYTHSGRMREASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRAK 288
+ V + ++ G + G M A F M + VV N +I G+ D A
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 289 AVFEKMR----ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
VF M + D T++ +++V +G EAL LF RM + G +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY------PLK 398
G Q+ + R++ D+ V + +I + KC + A FN P
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-- 634
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D+V +N+MI GY +EA +F + ++ P+ ++ ++ + + +F
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLL-GAC- 513
M K +P Y C++D ++ + + ++ E+M + P + + ++ G C
Sbjct: 695 SIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 514 --RTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVRE 561
R ++ A++ A+L P + Y +L Y GR + ++ E
Sbjct: 754 RGRVDEATNIFHQAID--AKLLP-DVVAYAILIRGYCKVGRLVEAALLYE 800
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 201/454 (44%), Gaps = 40/454 (8%)
Query: 22 TGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLF----E 75
+ I Y + G + A V+ I ++ ++ Q + ++A ++ +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 76 TTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEE 131
E +IV+++ ++ GF K G + +++ M +VV + +V G ++G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 132 AERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIG 183
A R +M + NVV + ++ G + +R ++A K+F +M + DV T ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS 239
EGRLEEA LF M K + + + T++ + ++ + + +LF++M +RN++S
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKIS 598
Query: 240 -----WTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAV 290
++ R+ +AS+FF+ + ++P +V N MI G+ +D A+ +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 291 FEKMRERDDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
FE ++ G T + +I V + A+ +F+ M +G+ N
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP----LKDVVM 402
+ ++ + + S +I K G + A IF++ L DVV
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
+ +I GY + G EA ++ M +GV PDD+
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 118/559 (21%), Positives = 217/559 (38%), Gaps = 126/559 (22%)
Query: 92 FVKNGMVAEARRVFDAMPVR-----NVV------SWTSMVRGYVQE-----GNVEEAERL 135
++NGM A +VFD M NV+ S + V ++ E G V++A +
Sbjct: 109 LIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEI 168
Query: 136 FWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMP--------------VKD--- 174
F + VV S ML L+ RV+ FD + V D
Sbjct: 169 FVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALF 228
Query: 175 -----------------------VVAVTNMIGGYCEEGRLEEARAL---FDEMPKRNVVT 208
+V+ ++ G + +R L D P NVVT
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVT 288
Query: 209 WTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP 264
+ T+++G+ + +D A LF+VM +R + ++++ ++ GY +G + + F
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 265 VK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG----TWSAMIKVYERKGFEL 316
K VV + I + GD+ A V+++M + T++ +IK + G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 317 EALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALI 376
EA G++ ++ + G + G ++ +++ + D+ + L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 377 TMYVKCGDLVRAKWIFNRYPLK--------DVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
K G ++ A R+ +K +VV++NS+I G+ + +EAL VFR M +
Sbjct: 469 DGLSKQGLMLHAM----RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 429 SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVD--------- 479
G+ PD +F V+ G+++E +F M K +EP Y ++D
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 480 --------------------------LLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLL 510
LL + ++ DA + + MEPD + + +++
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 511 GACRTHMKLDLAEVAVEKL 529
+ +LD AE E L
Sbjct: 644 CGYCSLRRLDEAERIFELL 662
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 205/484 (42%), Gaps = 94/484 (19%)
Query: 47 IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEKNIV----SWNGMVSGFVKNGMVAEAR 102
I S++N ++ A +AHQ A+ + E P +V ++ ++ G+++ G + A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 103 RVFDAMPVRNVVSWTS-----MVRGYVQEGNVEEAERLFWRMPEKN-----VVSWTVMLG 152
R+ + M V SW++ +V G+ +EG VE+A M ++ ++ ++
Sbjct: 245 RIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 153 GLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR---- 204
GL K V+ A ++ D+M + DV ++I G C+ G ++EA + D+M R
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMP 264
N VT+ T++S + +V+ A +L V+ T G + + F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVL---------------TSKGILPDVCTF----- 403
Query: 265 VKPVVACNEMIMGFGFDGDVDRAKAVFEKMR----ERDDGTWSAMIKVYERKGFELEALG 320
N +I G + A +FE+MR E D+ T++ +I KG EAL
Sbjct: 404 -------NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 321 LFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYV 380
+ +M+ G A + + + LI +
Sbjct: 457 MLKQMELSGCA-----------------------------------RSVITYNTLIDGFC 481
Query: 381 KCGDLVRAKWIFNRYPL----KDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
K A+ IF+ + ++ V +N++I G + E+A + M + G PD
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 437 SFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEK 496
++ +L+ G +K+ +I ++M EP I Y ++ L +AG+V A +++
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 497 MPME 500
+ M+
Sbjct: 601 IQMK 604
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 147/388 (37%), Gaps = 79/388 (20%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMVSGYARNRRVDVARKLF 229
DV +I C +L A + ++MP +V T+TT++ GY +D A ++
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 230 EVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKA 289
E M E SW+ V+ N ++ GF +G V+ A
Sbjct: 248 EQMVEFG-CSWSN--------------------------VSVNVIVHGFCKEGRVEDALN 280
Query: 290 VFEKMRERD-----DGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
++M +D T++ ++ + G A+ + M +EG +
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA----KWIFNRYPLKDV 400
+V +++ + + + LI+ K + A + + ++ L DV
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 401 VMWNSMITG-----------------------------------YSQHGLGEEALNVFRD 425
+NS+I G G +EALN+ +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 426 MCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAG 485
M LSG I++ ++ + K +E EIF+ M+ + V Y ++D L ++
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGVSRNSVTYNTLIDGLCKSR 519
Query: 486 QVNDAVEIVEKMPME---PDAIVWGSLL 510
+V DA +++++M ME PD + SLL
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D +N+++ G + G + A+ + M G PD ++ V+S G+VKE E+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLL-GACR 514
+ M + P Y ++ L + QV +A E+ + + PD + SL+ G C
Sbjct: 354 DQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGP----YVLLSHMYASKGRWED 555
T VA+E ++ K P Y +L SKG+ ++
Sbjct: 413 TRNH----RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/548 (20%), Positives = 239/548 (43%), Gaps = 61/548 (11%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAMP 109
+N +++A + + ++L E N+ ++N +++ F + ++ A + M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 110 VR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPE----KNVVSWTVMLGGLLKDSRVE 161
++V+ +S++ GY + +A L +M E + +++T ++ GL ++
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMP----KRNVVTWTTMV 213
+A L D M + ++V ++ G C+ G ++ A L ++M + +VV + T++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 214 SGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVV 269
+ R VD A LF+ M + N V++++++ GR +AS+ M
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM------ 246
Query: 270 ACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQREG 329
EK + T++A+I + ++G +EA L M +
Sbjct: 247 ---------------------IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 330 AALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAK 389
+ D +Q+ +V + DL + LI + K +
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 390 WIF----NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSAC 445
+F +R + D V + ++I G G + A VF+ M GVPPD +++ +L
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 446 SYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM---EPD 502
+GK+++ E+F+ M+ K +++ I Y M++ + +AG+V+D ++ + + +P+
Sbjct: 406 CNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 503 AIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP-KNAGPYVLLSHMYASKG-RWEDVEVVR 560
+ + +++ + L A ++K+ + P ++G Y L + G + E++R
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 561 EKIKTRSV 568
E R V
Sbjct: 525 EMRSCRFV 532
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 159/324 (49%), Gaps = 36/324 (11%)
Query: 25 ISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK-- 80
I + +++A +F E T I +++++++ + A L EK
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 81 --NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
N+V++N ++ FVK G EA ++ D M R ++ ++ S++ G+ +++A++
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 135 LFWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYC 186
+F M K+ ++ ++ G K RVED +LF M V D V T +I G
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVS--- 239
+G + A+ +F +M +++T++ ++ G N +++ A ++F+ M +++E+
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDI 430
Query: 240 --WTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKAVFEK 293
+T M+ G +G++ + + F ++ VKP VV N MI G + A A+ +K
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 294 MRER----DDGTWSAMIKVYERKG 313
M+E D GT++ +I+ + R G
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDG 514
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 225/511 (44%), Gaps = 39/511 (7%)
Query: 47 IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPE----KNIVSWNGMVSGFVKNGMVAEAR 102
I T ++ ++ A+ ++ A++L + N V + ++ K V EA
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 103 RVFDAMPVRNVV----SWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGL 154
++ + M + V ++ ++ G + + EA ++ RM + +++ ++ GL
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 155 LKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTW 209
K RV+ A+ LF +P ++V +I G+ GRL++A+A+ +M +V T+
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 210 TTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP- 264
+++ GY + V +A ++ M + N S+T ++ G+ G++ EA + M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 265 --VKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELE 317
+KP V N +I F + + A +F +M + D T++++I
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 318 ALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALIT 377
AL L M EG N R++ +V D ++LI
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 378 MYVKCGDLVRAKWIFNRYPLKD-----VVMWNSMITGYSQHGLGEEALNVFRDMCLSGVP 432
+ G++ +A+ +F + L+D + N +I G + G+ EEA+ ++M L G
Sbjct: 573 GLCRAGEVDKARSLFEKM-LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 433 PDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVE 492
PD ++F +++ +G++++G +F ++ + + P + ++ L + G V DA
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 493 IVEKMPME---PDAIVWGSLLGACRTHMKLD 520
++++ + P+ W LL + LD
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 186/413 (45%), Gaps = 32/413 (7%)
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFW 137
+++ N +V+G NG V++A + D M N V++ ++ + G A L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 138 RMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEG 189
+M E+N+ V +++++ GL KD +++A LF+ M +K D++ +IGG+C G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 190 RLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWT 241
R ++ L +M KR NVVT++ ++ + + ++ A +L + M +R N +++
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 242 AMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+++ G+ R+ EA + D M K ++ N +I G+ +D +F +M R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 298 ----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
+ T++ +++ + + G A LF M + +
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVVM----WNSMITG 409
++ ++ +S+ + D+ + +I + A +F PLK V + +N MI+
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 410 YSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+ +A +FR M G PD++++ ++ A E+ E MK
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 211/487 (43%), Gaps = 43/487 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLF----ETTPEKNIVSWNGMVSGFVKNG----MVAEARRV 104
S+ +++ + AV LF ++ P ++ +N + S K ++A +++
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 105 FDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRV 160
++ + + M+ + + + A ++ E + V + +L GL + RV
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 161 EDARKLFDMM------PVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWT 210
+A +L D M P ++ + ++ G C G++ +A L D M + N VT+
Sbjct: 175 SEALELVDRMVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 211 TMVSGYARNRRVDVARKLFEVMPERN----EVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
+++ ++ + +A +L M ERN V ++ ++ G G + A F+ M +K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 267 ----PVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG----TWSAMIKVYERKGFELEA 318
++ N +I GF G D + M +R T+S +I + ++G EA
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
L M + G A N + Q+ ++ D D+ + LI
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 379 YVKCGDLVRAKWIFNRYPLKDV----VMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
Y K + +F L+ V V +N+++ G+ Q G E A +F++M V PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 435 DISFIGVLSACSYSGKVKEGREIFESM-KCKYQVEPGIEHYACMVDLLGRAGQVNDAVEI 493
+S+ +L +G++++ EIF + K K +++ GI Y ++ + A +V+DA ++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI--YMIIIHGMCNASKVDDAWDL 530
Query: 494 VEKMPME 500
+P++
Sbjct: 531 FCSLPLK 537
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 25 ISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK-- 80
I + + G++ A ++ E I T ++N+++ + + ++ +A+ + + K
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 81 --NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
+I+++N +++G+ K + + +F M +R N V++ ++V+G+ Q G +E A++
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYC 186
LF M + ++VS+ ++L GL + +E A ++F + D+ +I G C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 187 EEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
++++A LF +P K + + M+S R + A LF M E +E+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVKPV---VACNEMIMGFGFDGDVDRA 287
++ ++ + A+E + M V+ +M++ G++D++
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKS 631
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 193/465 (41%), Gaps = 65/465 (13%)
Query: 132 AERLFWRMPEKNVVSWTVMLGGLLKDSRVEDARKLF-DMM---PVKDVVAVTNMIGGYCE 187
ER F ++N+ S+ L L + +DA LF DM+ P+ V+ + +
Sbjct: 42 CERGFSTFSDRNL-SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 188 EGRLEEARALFDEMPKRNVV----TWTTMVSGYARNRRVDVA----RKLFEVMPERNEVS 239
+ E AL +M + + T + M++ + R R++ A K+ ++ E + V
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 240 WTAMLMGYTHSGRMREASEFFDAMPV---KP-VVACNEMIMGFGFDGDVDRAKAVFEKMR 295
+ +L G R+ EA E D M KP ++ N ++ G +G V A + ++M
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 296 ER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXD 351
E ++ T+ ++ V + G A+ L +M+ L
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL------------------- 261
Query: 352 HGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMI 407
D S +I K G L A +FN +K D++ +N++I
Sbjct: 262 ----------------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQV 467
G+ G ++ + RDM + P+ ++F ++ + GK++E ++ + M + +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGI 364
Query: 468 EPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLL-GACRTHMKLDLAE 523
P Y ++D + ++ +A+++V+ M +PD + + L+ G C+ + D E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 524 VAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
+ E + N Y L + G+ E + + +++ +R V
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/558 (21%), Positives = 232/558 (41%), Gaps = 80/558 (14%)
Query: 52 SSWNAMVAAYFQAHQPHQAVTLF----ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDA 107
S++ ++ A+ + +TLF E E + + ++ GF K G V A + D
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 108 MPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDSR 159
M ++V + + + + G V+ A + F + + V++T M+G L K +R
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 160 VEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARAL------------------ 197
+++A ++F+ + V A MI GY G+ +EA +L
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 198 -----------------FDEMPKR---NVVTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
F+EM K N+ T+ ++ R ++D A +L + M +
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMPVK-----PVVACNEMIMGFGFDGDVDRAK 288
N + M+ S ++ EA F+ M K + C+ +I G G G VD A
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS-LIDGLGKVGRVDDAY 467
Query: 289 AVFEKMRERDDGT----WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXX 344
V+EKM + D T ++++IK + G + + ++ M + + +
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 345 XXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK------ 398
+ GR + + F D S LI +K G +F Y +K
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF--YSMKEQGCVL 585
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D +N +I G+ + G +A + +M G P +++ V+ + ++ E +F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGACRT 515
E K K ++E + Y+ ++D G+ G++++A I+E++ + P+ W SLL A
Sbjct: 646 EEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 516 HMKLDLAEVAVEKLAQLE 533
+++ A V + + +L+
Sbjct: 705 AEEINEALVCFQSMKELK 722
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 161/344 (46%), Gaps = 38/344 (11%)
Query: 22 TGAISRYARIGQIENARKVFDETPHIHRTTSS----WNAMVAAYFQAHQPHQAVTLFETT 77
T I + G+ E+ K++ + I++ S N + F+A +P + +FE
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDM--INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 78 PEKNIV----SWNGMVSGFVKNGMVAEARRVFDAMPVRNVV----SWTSMVRGYVQEGNV 129
+ V S++ ++ G +K G E +F +M + V ++ ++ G+ + G V
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 130 EEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNM 181
+A +L M K VV++ ++ GL K R+++A LF+ K +VV +++
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 182 IGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER-- 235
I G+ + GR++EA + +E+ ++ N+ TW +++ + ++ A F+ M E
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 236 --NEVSWTAMLMGYTHSGRMREASEFFDAMP---VKP-VVACNEMIMGFGFDGDVDRAKA 289
N+V++ ++ G + +A F+ M +KP ++ MI G G++ A A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 290 VFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREG 329
+F++ + D ++AMI+ ++A LF +R G
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 125/563 (22%), Positives = 228/563 (40%), Gaps = 80/563 (14%)
Query: 88 MVSGFVKNGMVAEARRVFDAM---PVRNVVS-WTSMVRGYVQEGNVEEAERLFWRMPE-- 141
MV G VK + E V M R S +T+++ + + + LF +M E
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 142 --KNVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEAR 195
V +T ++ G K+ RV+ A L D M D+V I + + G+++ A
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 196 ALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV----SWTAMLMGY 247
F E+ K + VT+T+M+ + R+D A ++FE + + V ++ M+MGY
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 248 THSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER---DDG 300
+G+ EA + K V+A N ++ G VD A VFE+M++ +
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS 378
Query: 301 TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARL 360
T++ +I + R G A L MQ+ G N D + +
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 361 VRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV----VMWNSMITGYSQHGLG 416
D +LI K G + A ++ + D +++ S+I + HG
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSY-SGKVKEGREIFESMKCK----------- 464
E+ +++DM P D+ + C + +G+ ++GR +FE +K +
Sbjct: 499 EDGHKIYKDMINQNCSP-DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 465 --------------YQVEPGIEHYACMVDL---------LGRAGQVNDAVEIVEKMP--- 498
Y++ ++ C++D + G+VN A +++E+M
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 499 MEPDAIVWGSLLGACRTHMKLD----LAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
EP + +GS++ +LD L E A K +L N Y L + GR +
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL---NVVIYSSLIDGFGKVGRID 674
Query: 555 DVEVVREKIKTRSVIKLPG-YSW 576
+ ++ E++ + + P Y+W
Sbjct: 675 EAYLILEELMQKGLT--PNLYTW 695
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 26/258 (10%)
Query: 25 ISRYARIGQIENARKVFD--ETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK-- 80
I+ ++G E+A + E HI +NA++ + A LF +K
Sbjct: 48 INGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Query: 81 --NIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
++++++GM+ F ++G +A ++ M R +VV++++++ V+EG V EAE
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 135 LFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYC 186
++ M + + +++ M+ G K R+ DA+++ D M K DVV + +I GYC
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
+ R++ +F EM +R N VT+TT++ G+ + +D A+ L VM N +
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Query: 239 SWTAMLMGYTHSGRMREA 256
++ +ML +R+A
Sbjct: 288 TFQSMLASLCSKKELRKA 305
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 126/308 (40%), Gaps = 22/308 (7%)
Query: 174 DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVVTWTTMVSGYARNRRVDVARKLFEVMP 233
DVV T ++ G C EGR+ +A AL D M + + T+++G + + A L M
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 234 ER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVD 285
E + V + A++ G A F M K V+ + MI F G
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 286 RAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXX 341
A+ + M ER D T+SA+I ++G EA ++ M R G FP
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI---FPTTITYN 185
Query: 342 XXXXXXXXXDH---GRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF----NR 394
D +++ + D+ S LI Y K + IF R
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 395 YPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEG 454
+ + V + ++I G+ Q G + A ++ M SGV P+ I+F +L++ ++++
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 455 REIFESMK 462
I E ++
Sbjct: 306 FAILEDLQ 313
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 44/295 (14%)
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEALGLFARMQR 327
VV ++ G +G V +A A+ ++M E + +I + G AL L ++M+
Sbjct: 10 VVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEE 69
Query: 328 EGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVR 387
+ A +V + +A+I K G +
Sbjct: 70 T--------------------------HIKAHVV---------IYNAIIDRLCKDGHHIH 94
Query: 388 AKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLS 443
A+ +F K DV+ ++ MI + + G +A + RDM + PD ++F +++
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 444 ACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME--- 500
A GKV E EI+ M + + P Y M+D + ++NDA +++ M +
Sbjct: 155 ALVKEGKVSEAEEIYGDM-LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 501 PDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWE 554
PD + + +L+ G C+ + E+ E + N Y L H + G +
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 211/466 (45%), Gaps = 45/466 (9%)
Query: 68 HQAVTLF----ETTPEKNIVSWNGMVSGFVK---NGMVAEARRVFDAMPVRN-VVSWTSM 119
+ A+ LF ++ P +IV +N ++S VK +V + + + +RN + ++ +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 120 VRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRVEDARKLFDMMP---- 171
+ + V A + +M E + V+ ++ G + +RV DA L D M
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 172 VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRR-VDVAR 226
D+VA +I C+ R+ +A F E+ ++ NVVT+T +V+G + R D AR
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 227 KLFEVMPER---NEVSWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFG 279
L +++ ++ N ++++A+L + +G++ EA E F+ M + P +V + +I G
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 280 FDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFP 335
+D A +F+ M + D +++ +I + + + + LF M + G N
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 336 XXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRY 395
D ++ +++ D++ + L+ G+L +A IF
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 396 PLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKV 451
+ D+V + ++I G + G EEA ++F + L G+ PD +++ ++S G +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 452 KEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
E ++ MK + G+ C + G + + E+++KM
Sbjct: 487 HEVEALYTKMK-----QEGLMKNDCTLS----DGDITLSAELIKKM 523
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 224/509 (44%), Gaps = 40/509 (7%)
Query: 31 IGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQ-AHQPHQAVTLFETTPEK----NIV 83
G + AR+VF++ + + + S N + + ++ A+ +F PE N+
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRM 139
S+N ++ + G + EA + M ++ +V+S++++V GY + G +++ +L M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 140 PEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRL 191
K N + ++G L + ++ +A + F M + D V T +I G+C+ G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 192 EEARALFDEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAM 243
A F EM R+ V+T+T ++SG+ + + A KLF M E + V++T +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 244 LMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM----R 295
+ GY +G M++A + M P VV +I G +GD+D A + +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 296 ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQ 355
+ + T+++++ + G EA+ L + G + D ++
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAK----WIFNRYPLKDVVMWNSMITGYS 411
+ ++ + + L+ + G L + W+ + + +NS++ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+ A +++DMC GV PD ++ ++ + +KE +F+ MK K +
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSV 666
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPME 500
Y+ ++ + + +A E+ ++M E
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 166/344 (48%), Gaps = 34/344 (9%)
Query: 22 TGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT-- 77
T I + + G I A K F E + I ++ A+++ + Q +A LF
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 78 --PEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGYVQEGNVEE 131
E + V++ +++G+ K G + +A RV + M NVV++T+++ G +EG+++
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 132 AERLF---WRMP-EKNVVSWTVMLGGLLKDSRVEDARKL---FDMMPVK-DVVAVTNMIG 183
A L W++ + N+ ++ ++ GL K +E+A KL F+ + D V T ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER---- 235
YC+ G +++A+ + EM + +VT+ +++G+ + ++ KL M +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVF 291
N ++ +++ Y ++ A+ + M + V ++ G ++ A +F
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 292 EKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
++M+ + T+S +IK + ++ LEA +F +M+REG A
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 198/491 (40%), Gaps = 94/491 (19%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERL---FWRMPEKNVVSWTVMLGGLL--------KDSRV 160
N+ S ++ V +++ A+ L FW P+ NV V LL D RV
Sbjct: 118 NLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV 177
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV-------TWTTMV 213
D F ++ + G L EAR +F++M +V + T +
Sbjct: 178 FDV--FFQVL---------------VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 214 SG--YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----P 267
S Y + V R+ EV N S+ ++ GR++EA M +K
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA------LGL 321
V++ + ++ G+ G++D+ W +I+V +RKG + + +GL
Sbjct: 281 VISYSTVVNGYCRFGELDKV--------------WK-LIEVMKRKGLKPNSYIYGSIIGL 325
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
R+ + A + + ++R D V + LI + K
Sbjct: 326 LCRICKLAEA----------------------EEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 382 CGDLVRAKWIF----NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
GD+ A F +R DV+ + ++I+G+ Q G EA +F +M G+ PD ++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVE-- 495
F +++ +G +K+ + M + P + Y ++D L + G ++ A E++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 496 -KMPMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRW 553
K+ ++P+ + S++ G C++ + ++ E A + Y L Y G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 554 EDV-EVVREKI 563
+ E+++E +
Sbjct: 543 DKAQEILKEML 553
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 224/509 (44%), Gaps = 40/509 (7%)
Query: 31 IGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQ-AHQPHQAVTLFETTPEK----NIV 83
G + AR+VF++ + + + S N + + ++ A+ +F PE N+
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 84 SWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRM 139
S+N ++ + G + EA + M ++ +V+S++++V GY + G +++ +L M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 140 PEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRL 191
K N + ++G L + ++ +A + F M + D V T +I G+C+ G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 192 EEARALFDEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWTAM 243
A F EM R+ V+T+T ++SG+ + + A KLF M E + V++T +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 244 LMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKM----R 295
+ GY +G M++A + M P VV +I G +GD+D A + +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 296 ERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQ 355
+ + T+++++ + G EA+ L + G + D ++
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 356 VHARLVRSEFDQDLYVASALITMYVKCGDLVRAK----WIFNRYPLKDVVMWNSMITGYS 411
+ ++ + + L+ + G L + W+ + + +NS++ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 412 QHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGI 471
+ A +++DMC GV PD ++ ++ + +KE +F+ MK K +
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSV 666
Query: 472 EHYACMVDLLGRAGQVNDAVEIVEKMPME 500
Y+ ++ + + +A E+ ++M E
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 166/344 (48%), Gaps = 34/344 (9%)
Query: 22 TGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETT-- 77
T I + + G I A K F E + I ++ A+++ + Q +A LF
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 78 --PEKNIVSWNGMVSGFVKNGMVAEARRVFDAM----PVRNVVSWTSMVRGYVQEGNVEE 131
E + V++ +++G+ K G + +A RV + M NVV++T+++ G +EG+++
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 132 AERLF---WRMP-EKNVVSWTVMLGGLLKDSRVEDARKL---FDMMPVK-DVVAVTNMIG 183
A L W++ + N+ ++ ++ GL K +E+A KL F+ + D V T ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 184 GYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER---- 235
YC+ G +++A+ + EM + +VT+ +++G+ + ++ KL M +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 236 NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVF 291
N ++ +++ Y ++ A+ + M + V ++ G ++ A +F
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 292 EKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAA 331
++M+ + T+S +IK + ++ LEA +F +M+REG A
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 198/491 (40%), Gaps = 94/491 (19%)
Query: 112 NVVSWTSMVRGYVQEGNVEEAERL---FWRMPEKNVVSWTVMLGGLL--------KDSRV 160
N+ S ++ V +++ A+ L FW P+ NV V LL D RV
Sbjct: 118 NLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV 177
Query: 161 EDARKLFDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV-------TWTTMV 213
D F ++ + G L EAR +F++M +V + T +
Sbjct: 178 FDV--FFQVL---------------VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 214 SG--YARNRRVDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVK----P 267
S Y + V R+ EV N S+ ++ GR++EA M +K
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 268 VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTWSAMIKVYERKGFELEA------LGL 321
V++ + ++ G+ G++D+ W +I+V +RKG + + +GL
Sbjct: 281 VISYSTVVNGYCRFGELDKV--------------WK-LIEVMKRKGLKPNSYIYGSIIGL 325
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
R+ + A + + ++R D V + LI + K
Sbjct: 326 LCRICKLAEA----------------------EEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 382 CGDLVRAKWIF----NRYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDIS 437
GD+ A F +R DV+ + ++I+G+ Q G EA +F +M G+ PD ++
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 438 FIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVE-- 495
F +++ +G +K+ + M + P + Y ++D L + G ++ A E++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 496 -KMPMEPDAIVWGSLL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRW 553
K+ ++P+ + S++ G C++ + ++ E A + Y L Y G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 554 EDV-EVVREKI 563
+ E+++E +
Sbjct: 543 DKAQEILKEML 553
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 235/545 (43%), Gaps = 57/545 (10%)
Query: 45 PHIHRTTSSWNAM----VAAYFQAHQPHQAVTLFET----TPEKNIVSWNGMVSGFVK-- 94
P++H + A+ ++AY +PH A+ +F+ + N+++ N ++ G V+
Sbjct: 121 PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYP 180
Query: 95 -NGMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK-----NV 144
+ ++ AR VFD M NV ++ +V GY EG +E+A + RM + +
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 145 VSWTVMLGGLLKDSRVEDARKLF-DMMP---VKDVVAVTNMIGGYCEEGRLEEARALFDE 200
V++ +L + K R+ D ++L DM V + V N++ GYC+ G L+EA + +
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 201 MPKRNVV----TWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGR 252
M + NV+ T+ +++G + +L + M + + V++ ++ G G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 253 MREASEFFDAMPVKPVVACNEMIMGFGFD--GDVDRAKAVFEKMRERDDG--------TW 302
EA + + M V A N++ ++ +AV K++E D T+
Sbjct: 361 SLEARKLMEQMENDGVKA-NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+IK Y + G AL + M ++G +N D + +
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP----LKDVVMWNSMITGYSQHGLGEE 418
F D LI + + + +A +++ V +NS+I G HG E
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMV 478
A+ F ++ SG+ PDD +F ++ G+V++ E + K+ +P ++Y C +
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIKHSFKP--DNYTCNI 596
Query: 479 DLLG--RAGQVNDAVEIVEKM--PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQLEP 534
L G + G A+ + E D + + +++ A KL + A + L+++E
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKL---KEAYDLLSEMEE 653
Query: 535 KNAGP 539
K P
Sbjct: 654 KGLEP 658
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 195/459 (42%), Gaps = 78/459 (16%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTPEKNIV----SWNGMVSGFVKNGMVAEARRVFDAM 108
++N +V Y + +A + E + N++ ++N +++G G + E + DAM
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 109 PVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMP----EKNVVSWTVMLGGLLKDSRV 160
+VV++ +++ G + G EA +L +M + N V+ + L L K+ +
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 161 E----DARKLFDMMPVK-DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWTT 211
E ++L DM D+V +I Y + G L A + EM ++ N +T T
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 212 MVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMP--- 264
++ + R++D A L +R +EV++ ++MG+ ++ +A E +D M
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 265 VKPVVAC-NEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEAL 319
+ P V+ N +I G G + A F+++ E DD T++++I Y ++G
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG------ 570
Query: 320 GLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMY 379
R A F + ++ F D Y + L+
Sbjct: 571 -------RVEKAFEF----------------------YNESIKHSFKPDNYTCNILLNGL 601
Query: 380 VKCGDLVRAKWIFNRYPLK---DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDI 436
K G +A FN + D V +N+MI+ + + +EA ++ +M G+ PD
Sbjct: 602 CKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 437 SFIGVLSACSYSGKVKEGREI-------FESMKCKYQVE 468
++ +S GK+ E E+ F SMK QVE
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVE 700
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 228/519 (43%), Gaps = 52/519 (10%)
Query: 38 RKVFDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFV 93
RK+ + I+ S + ++ Y Q + A + ++ N+ + N ++ G
Sbjct: 96 RKMLETDTFINFV--SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 94 KN-------GMVAEARRVFDAMPVRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEK---- 142
+N ++ E RR MP +V S+ +++RG+ + +E+A L M
Sbjct: 154 RNLECGKAVSLLREMRRN-SLMP--DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 143 NVVSWTVMLGGLLKDSRVEDARKLFDMMPV----KDVVAVTNMIGGYCEEGRLEEARALF 198
++V+W +++ K ++++A M D+V T++I G+C+ G L+ +ALF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 199 DEMPKRN----VVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHS 250
DE+ +R +T+ T++ G+ + ++ A ++FE M ER N ++T ++ G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 251 GRMREASEFFDAMPVKP----VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTW 302
G+ +EA + + M K V N +I DG V A + E M++R D+ T+
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQ---VHAR 359
+ ++ KG EA L M ++ + + P + Q ++
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTD-PDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRA----KWIFNRYPLKDVVMWNSMITGYSQHGL 415
LV D + L+ +K GD+ +A K I + +++ + +MI G+ + G+
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 416 GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA 475
A + M +S + P + +LS+ G + + +FE M+ + P + +
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ-RDNNFPDVVSFN 568
Query: 476 CMVDLLGRAGQVNDAVEIVEKMP---MEPDAIVWGSLLG 511
M+D +AG + A ++ M + PD + L+
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 201/447 (44%), Gaps = 38/447 (8%)
Query: 53 SWNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVAEARRVFDAM 108
+W ++ A+ +A + +A+ + E ++V + ++ GF G + + +FD +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 109 PVRN----VVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRV 160
R +++ +++RG+ + G ++EA +F M E+ NV ++T ++ GL +
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 161 EDARKLFDMMPVKD----VVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTM 212
++A +L ++M KD V +I C++G + +A + + M KR +T+ +
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 213 VSGYARNRRVDVARKLFEVMPERNE------VSWTAMLMGYTHSGRMREASEFFDAMPVK 266
+ G +D A KL +M + + +S+ A++ G R+ +A + +D + K
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 267 ----PVVACNEMIMGFGFDGDVDRAKAVFEKMRE----RDDGTWSAMIKVYERKGFELEA 318
V N ++ GDV++A +++++ + R+ T++AMI + + G A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
GL +M+ + D ++ + R D+ + +I
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 379 YVKCGDLVRAKWIF---NRYPLK-DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
+K GD+ A+ + +R L D+ ++ +I + + G +EA++ F M SG PD
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 435 DISFIGVLSACSYSGKVKEGREIFESM 461
VL C G+ + E+ + +
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKL 660
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 138/337 (40%), Gaps = 55/337 (16%)
Query: 205 NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFF 260
N V+ + ++ Y + R+ A + +M +R N + +L G + +A
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 261 DAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEKMRERDDG----TWSAMIKVYERK 312
M + P V + N +I GF ++++A + +M+ TW +I + +
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 313 GFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVA 372
G EA+G M+ G + DL V
Sbjct: 226 GKMDEAMGFLKEMKFMG-----------------------------------LEADLVVY 250
Query: 373 SALITMYVKCGDLVRAKWIFN----RYPLKDVVMWNSMITGYSQHGLGEEALNVFRDMCL 428
++LI + CG+L R K +F+ R + +N++I G+ + G +EA +F M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 429 SGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVN 488
GV P+ ++ G++ GK KE ++ M K + EP Y +++ L + G V
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVA 369
Query: 489 DAVEIVEKMP---MEPDAIVWGSLLGACRTHMKLDLA 522
DAVEIVE M PD I + LLG LD A
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 185/426 (43%), Gaps = 35/426 (8%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVRN-----VVSWTSMVRGYVQEGNVEEAE 133
E + ++N ++ G G V+EA + D M V N VV++ S+V G + G+ A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 134 RLFWRMPEKNV----VSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGY 185
L +M E+NV +++ ++ L +D ++ A LF M K VV +++ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 186 CEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NE 237
C+ G+ + L +M R NV+T+ ++ + + ++ A +L++ M R N
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 238 VSWTAMLMGYTHSGRMREASEFFDAM---PVKP-VVACNEMIMGFGFDGDVDRAKAVFEK 293
+++ ++ GY R+ EA+ D M P +V +I G+ VD VF
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 294 MRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXX 349
+ +R + T+S +++ + + G A LF M G +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 350 XDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNS 405
+ ++ L +S+ D + + + +I K G + A +F P K +V+ +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 406 MITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK-CK 464
MI+G + G EA + R M G P+D ++ ++ A G + ++ E MK C
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 465 YQVEPG 470
+ +
Sbjct: 574 FSADAS 579
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 203/475 (42%), Gaps = 78/475 (16%)
Query: 81 NIVSWNGMVSGFVKNGMVAEARRVFDAM------PVRNVVSWTSMVRGYVQEGNVEEAER 134
NI + N M++ F + A V + P + ++ ++++G EG V EA
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP--DTTTFNTLIKGLFLEGKVSEAVV 179
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYC 186
L RM E +VV++ ++ G+ + A L M + DV + +I C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 187 EEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
+G ++ A +LF EM K +VVT+ ++V G + + + L + M R N +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKM 294
++ +L + G+++EA+E + M + ++ N ++ G+ + A + + M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 295 -RER---DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
R + D T++++IK Y ++R
Sbjct: 360 VRNKCSPDIVTFTSLIKGY-------------CMVKR----------------------V 384
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYP----LKDVVMWNSM 406
D G +V + + + S L+ + + G + A+ +F L DV+ + +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
+ G +G E+AL +F D+ S + + + ++ GKV++ +F S+ CK
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK-G 503
Query: 467 VEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLLGACRTHMK 518
V+P + Y M+ L + G +++A ++ KM + P+ + +L+ R H++
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI---RAHLR 555
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 28 YARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE----TTPEKN 81
+ + G+++ A +++ E T I ++N ++ Y ++ +A + + +
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 82 IVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFW 137
IV++ ++ G+ V + +VF + R N V+++ +V+G+ Q G ++ AE LF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 138 RMPEK----NVVSWTVMLGGLLKDSRVEDARKLF-DMMPVK---DVVAVTNMIGGYCEEG 189
M +V+++ ++L GL + ++E A ++F D+ K +V T +I G C+ G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 190 RLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWT 241
++E+A LF +P K NV+T+T M+SG + + A L M E N+ ++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 242 AMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAVFEKM 294
++ + G + +++ + M +C GF D K V + +
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMK-----SC-------GFSADASSIKMVIDML 588
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 32/308 (10%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEKNI----VSWNGMVSGFVKNGMVAEARRVFDAMP 109
+N ++ + + A+ +F +K I V++N ++SG +G +A R+ M
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 110 VR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKDSRVE 161
R NV+ +T+++ +V+EGN+ EA L+ M + NV ++ ++ G +
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 162 DARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNVV----TWTTMV 213
DA+ +FD+M K DVV +I G+C+ R+E+ LF EM + +V T+ T++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 214 SGYARNRRVDVARKLFEVMPE----RNEVSWTAMLMGYTHSGRMREASEFFDAMPVK--- 266
GY + +++VA+K+F M + + V++ +L ++G++ +A + +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 267 -PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGL 321
++ N +I G + A +F + + D + MI RKG + EA L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 322 FARMQREG 329
RM+ +G
Sbjct: 487 CRRMKEDG 494
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 24/344 (6%)
Query: 143 NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALF 198
++V+ +L G + +R ++A L D M V +VV +I G C+ L A +F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 199 DEMPKRNV----VTWTTMVSGYARNRR-VDVARKLFEVMPER---NEVSWTAMLMGYTHS 250
M K+ + VT+ T++SG + + R D AR L +++ + N + +TA++ +
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 251 GRMREASEFFDAMPVKPVV----ACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTW 302
G + EA + M + VV N +I GF G + AK +F+ M + D T+
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 303 SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVR 362
+ +I + + + + LF M +G + + ++V R+V
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 363 SEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEE 418
D+ + L+ G + +A + D++ +N +I G + +E
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 419 ALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
A +FR + GV PD I++I ++S G +E ++ MK
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 399 DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
D V +N++I+G S G +A + RDM + P+ I F ++ G + E R ++
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPME---PDAIVWGSLL-GACR 514
+ M + V P + Y +++ G + DA + + M + PD + + +L+ G C+
Sbjct: 278 KEM-IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 515 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSV 568
+ D ++ E Q +A Y L H Y G+ V +K+ R V
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN----VAQKVFNRMV 386
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 203/455 (44%), Gaps = 37/455 (8%)
Query: 51 TSSWNAMVAAYFQAHQPHQAVTLFETTPE----KNIVSWNGMVSGFVKNGMVAEARRVFD 106
T +++ ++ + +A+ L + E +++ N +V+G NG V++A + D
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 107 AMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNV----VSWTVMLGGLLKDS 158
M N V++ +++ + G A L +M E+ + V +++++ GL KD
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 159 RVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKR----NVVTWT 210
+++A LF+ M +K D++ T +I G+C GR ++ L +M KR +VV ++
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 211 TMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPVK 266
++ + + ++ A +L + M +R + V++T+++ G+ ++ +A+ D M K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 267 ----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEA 318
+ N +I G+ +D +F KM R D T++ +I+ + G A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 319 LGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITM 378
LF M + + ++ ++ +S+ + D+ + + +I
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 379 YVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHGLGEEALNVFRDMCLSGVPPD 434
+ A +F PLK DV +N MI G + G EA +FR M G P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 435 DISFIGVLSACSYSGKVKEGREIFESMK-CKYQVE 468
++ ++ A G + ++ E +K C + V+
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 196/455 (43%), Gaps = 41/455 (9%)
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
E + V+++ +++G G V+EA + D M +++ ++V G G V +A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYC 186
L RM E N V++ +L + K + A +L M + D V + +I G C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 187 EEGRLEEARALFDEMP----KRNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEV 238
++G L+ A LF+EM K +++ +TT++ G+ R D KL M +R + V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 239 SWTAMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKM 294
+++A++ + G++REA E M + + V +I GF + +D+A + + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 295 RERDDG----TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXX 350
+ G T++ +I Y + + L LF +M G +
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 351 DHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSM 406
+ +++ +V D+ L+ G+ +A IF + D+ ++N +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 407 ITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQ 466
I G ++A ++F + L GV PD ++ ++ G + E +F M+
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME---- 554
Query: 467 VEPGIEHYACMVDLLGRA----GQVNDAVEIVEKM 497
E G C ++L RA G + +++E++
Sbjct: 555 -EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 175/403 (43%), Gaps = 68/403 (16%)
Query: 141 EKNVVSWTVMLGGLLKDSRVEDARKLFDMM------PVKDVVAVTNMIGGYCEEGRLEEA 194
E + V+++ ++ GL + RV +A +L D M P ++ + ++ G C G++ +A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLNGKVSDA 196
Query: 195 RALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMG 246
L D M + N VT+ ++ ++ + +A +L M ER + V ++ ++ G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 247 YTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----D 298
G + A F+ M +K ++ +I GF + G D + M +R D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 299 DGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+SA+I + ++G EA ++H
Sbjct: 317 VVAFSALIDCFVKEGKLREA-----------------------------------EELHK 341
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLK----DVVMWNSMITGYSQHG 414
+++ D ++LI + K L +A + + K ++ +N +I GY +
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 415 LGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHY 474
L ++ L +FR M L GV D +++ ++ GK++ +E+F+ M + +V P I Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSY 460
Query: 475 ACMVDLLGRAGQVNDAVEI---VEKMPMEPDAIVWGSLL-GAC 513
++D L G+ A+EI +EK ME D ++ ++ G C
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 37/299 (12%)
Query: 41 FDETPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP-----EKNIVSWNGMVSGFVKN 95
F+ +P + + + +V AY ++ +A+ + T E N+V++N +++G+
Sbjct: 219 FEVSPDVF----TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 96 GMVAEARRVFDAMP----VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS----W 147
G V RV M RNVV++TS+++GY ++G +EEAE +F + EK +V+ +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 148 TVMLGGLLKDSRVEDARKLFDMM---PVKDVVAVTN-MIGGYCEEGRLEEARALFDEMP- 202
V++ G + ++ DA ++ D M V+ + N +I GYC+ G+L EA +F M
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 203 ---KRNVVTWTTMVSGYARNRRVDVARKLFEVMPERNEV----SWTAMLMGYTHSGRMRE 255
K + T+ T+V GY R VD A KL + M ++ V ++ +L GY+ G +
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 256 ASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMI 306
+ M + V ++C+ ++ GD + A ++E + R D T + MI
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 145/346 (41%), Gaps = 43/346 (12%)
Query: 167 FDMMPVKDVVAVTNMIGGYCEEGRLEEARALFDEMPKR-----NVVTWTTMVSGYARNRR 221
F++ P DV + ++ YC G +++A E NVVT+ ++++GYA
Sbjct: 219 FEVSP--DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 222 VDVARKLFEVMPERNEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFD 281
V+ ++ +M ER VS + VV +I G+
Sbjct: 277 VEGMTRVLRLMSERG-VS--------------------------RNVVTYTSLIKGYCKK 309
Query: 282 GDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXX 337
G ++ A+ VFE ++E+ D + ++ Y R G +A+ + M G N
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC 369
Query: 338 XXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPL 397
Q+ +R+ D + + L+ Y + G + A + ++
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 398 KDVV----MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKE 453
K+VV +N ++ GYS+ G + L++++ M GV D+IS +L A G E
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 454 GREIFESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKMPM 499
+++E++ + + I M+ L + +VN+A EI++ + +
Sbjct: 490 AMKLWENVLARGLLTDTIT-LNVMISGLCKMEKVNEAKEILDNVNI 534
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 132 AERLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLF-DMMP----VKDVVAVTNMI 182
AE + P+K N + + V + GL K ++EDARKLF D++ + D T +I
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 183 GGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPER--- 235
G G + +A L DEM + N+VT+ ++ G + VD A++L +P++
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 236 -NEVSWTAMLMGYTHSGRMREASEFFDAMPVKPVVACNEMIMGFGFDGDVDRAKAV 290
N +++ ++ G SG + EA + M K +V G GDVD K V
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR------GSDKQGDVDIPKEV 872
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 302 WSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLV 361
+ ++KVY KG AL +F M G + V+ +++
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 362 RSEFDQDLYVASALITMYVKCGD----LVRAKWIFNRYPLK-DVVMWNSMITGYSQHGLG 416
E D++ S ++ Y + G+ +V AK + L+ +VV +NS+I GY+ G
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 417 EEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH-YA 475
E V R M GV + +++ ++ G ++E +FE +K K V +H Y
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD--QHMYG 335
Query: 476 CMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLL-GACRT 515
++D R GQ+ DAV + + M + + + SL+ G C++
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 151/349 (43%), Gaps = 50/349 (14%)
Query: 25 ISRYARIGQIENARKVFDETPHIHR---TTSSWNAMVAAYFQAHQPHQAVTLFETTPEKN 81
IS ++ ++ A+++ D +I R ++ A+ Y++ +A + E K
Sbjct: 513 ISGLCKMEKVNEAKEILDNV-NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 82 IVS----WNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAE 133
I +N ++SG K + + + + R V ++ +++ G+ G +++A
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 134 RLFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDVVAVTNMIGGYCEEG 189
+ M EK NV + + L + ++++A + ++ +V ++ GY
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA-----CLLLQKIVDFDLLLPGYQSLK 686
Query: 190 RLEEARA------------LFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMP 233
EA A + + PK+ N + + ++G + +++ ARKLF +
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 234 ERN-----EVSWTAMLMGYTHSGRMREASEFFDAMPVK----PVVACNEMIMGFGFDGDV 284
+ E ++T ++ G +G + +A D M +K +V N +I G G+V
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 285 DRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREG 329
DRA+ + K+ ++ + T++ +I + G EA+ L +M +G
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 208/480 (43%), Gaps = 54/480 (11%)
Query: 44 TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFETTP----EKNIVSWNGMVSGFVKNGMVA 99
TPH SS+N++V+ + Q A + + P E +++S+N ++ G +NG +
Sbjct: 53 TPH----RSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 100 EARRVFDAMPVR-------NVVSWTSMVRGYVQEGNVEEA---ERLFWRMPEKNVVSWTV 149
A V +++ ++VS+ S+ G+ + ++E + + NVV+++
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYST 168
Query: 150 MLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPK-- 203
+ K ++ A K F M +VV T +I GYC+ G LE A +L+ EM +
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 204 --RNVVTWTTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREAS 257
NVVT+T ++ G+ + + A +++ M E N + +T ++ G+ G A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 258 EFFDAMPVK----PVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVY 309
+F M + + A +I G +G + A + E M + D ++ M+ Y
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 310 ERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQ-D 368
+ G A+ ++ ++ G + Q+H +V ++ +
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA------KNGQLHEAIVYFCIEKAN 402
Query: 369 LYVASALITMYVKCGDLVRAKWIFNRYP----LKDVVMWNSMITGYSQHGLGEEALNVFR 424
+ + LI K GD + + +F++ + D M+ S I G + G +A +
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 425 DMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYACMVDLLGRA 484
M G+ D +++ ++ + G + E R++F+ M + GI + + DLL RA
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM-----LNSGISPDSAVFDLLIRA 517
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 169/367 (46%), Gaps = 32/367 (8%)
Query: 50 TTSSWNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVF 105
T S+W + + ++ + A+ F + N+V++ ++ G+ K G + A ++
Sbjct: 165 TYSTW---IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 106 DAMP-VR---NVVSWTSMVRGYVQEGNVEEAERLFWRMPEK----NVVSWTVMLGGLLKD 157
M VR NVV++T+++ G+ ++G ++ AE ++ RM E N + +T ++ G +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 158 SRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTW 209
++A K M + D+ A +I G C G+L+EA + ++M K ++ V +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 210 TTMVSGYARNRRVDVARKLFEVMPER----NEVSWTAMLMGYTHSGRMREASEFFDAMPV 265
TTM++ Y ++ R+ A ++ + ER + V+ + M+ G +G++ EA +F
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 266 KPVVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEALGL 321
V+ +I +GD + +F K+ E D +++ I ++G ++A L
Sbjct: 402 NDVMY-TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 322 FARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVK 381
RM +EG L+ RQV ++ S D V LI Y K
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 382 CGDLVRA 388
G++ A
Sbjct: 521 EGNMAAA 527
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 159/370 (42%), Gaps = 66/370 (17%)
Query: 25 ISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVAAYFQAHQPHQAVTLFE----TTP 78
I + + G+++ A K F + ++ ++ Y +A AV+L++
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 79 EKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAER 134
N+V++ ++ GF K G + A ++ M N + +T+++ G+ Q G+ + A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 135 LFWRMPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMP----VKDVVAVTNMIGGYC 186
+M + ++ ++ V++ GL + ++++A ++ + M V D+V T M+ Y
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 187 EEGRLEEARALFDEMPKR----NVVTWTTMVSGYARNRRVDVARKLFEVMPERNEVSWTA 242
+ GR++ A ++ ++ +R +VV +TM+ G A+N ++ A F + + N+V +T
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTV 408
Query: 243 MLMGYTHSGRMREASEFF-----------------------------DAMPVKP------ 267
++ G E F DA +K
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 268 ----VVACNEMIMGFGFDGDVDRAKAVFEKMRER----DDGTWSAMIKVYERKGFELEAL 319
++A +I G G + A+ VF++M D + +I+ YE++G A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 320 GLFARMQREG 329
L MQR G
Sbjct: 529 DLLLDMQRRG 538
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 54 WNAMVAAYFQAHQPHQAVTLFETTPEK----NIVSWNGMVSGFVKNGMVAEARRVFDAMP 109
+ M+ AYF++ + AV ++ E+ ++V+ + M+ G KNG + EA V+ +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIE 399
Query: 110 VRNVVSWTSMVRGYVQEGNVEEAERLFWRMPEKNVVS----WTVMLGGLLKDSRVEDARK 165
N V +T ++ +EG+ E ERLF ++ E +V +T + GL K + DA K
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 166 LFDMMP----VKDVVAVTNMIGGYCEEGRLEEARALFDEMPKRNV----VTWTTMVSGYA 217
L M + D++A T +I G +G + EAR +FDEM + + ++ Y
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 218 RNRRVDVARKLFEVMPERNEVSWTA 242
+ + A L M R V+ +
Sbjct: 520 KEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 172/407 (42%), Gaps = 46/407 (11%)
Query: 202 PKRNVVTWTTMVSGYARNRRVDVARKLFEVMP----ERNEVSWTAMLMGYTHSGRMREAS 257
P R+ ++ ++VS + +V A + MP E + +S+ +++ G+ +G +R AS
Sbjct: 54 PHRS--SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 258 EFFDAMPVKPVVACNEMIMGFG--FDGDVDRAKAVFEKMRERDDG--------------- 300
+++ C I+ F F+G F KM+ D+
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNG--------FSKMKMLDEVFVYMGVMLKCCSPNV 163
Query: 301 -TWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHAR 359
T+S I + + G AL F M+R+ + N + ++
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 360 LVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDV----VMWNSMITGYSQHGL 415
+ R ++ +ALI + K G++ RA+ +++R V +++ ++I G+ Q G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 416 GEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEHYA 475
+ A+ M G+ D ++ ++S +GK+KE EI E M+ K + P + +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME-KSDLVPDMVIFT 342
Query: 476 CMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGACRTHMKLDLAEVAVEKLAQL 532
M++ ++G++ AV + K+ EPD + +++ + +L A V +
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CI 398
Query: 533 EPKNAGPYVLLSHMYASKGRWEDVEVVREKIKTRSVI--KLPGYSWI 577
E N Y +L +G + +VE + KI ++ K SWI
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 126/573 (21%), Positives = 243/573 (42%), Gaps = 83/573 (14%)
Query: 23 GAISRYARIGQIENARKVFDETPH--IHRTTSSWNAMVA-----AYF-QAHQPHQAVTLF 74
GA+ Y R G+++ A VF+ T S+NA+++ YF QAH+ + +
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 75 ETTPEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVE 130
TP+ + S+ + F K A R+ + M + NVV++ ++V G+ +E
Sbjct: 141 GITPD--VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 131 EAERLFWRMPEKNVV----SWTVMLGGLLKDSRVEDARKLFDMMPVKDVV----AVTNMI 182
E LF +M V ++ +L L K V++ KL D + + V+ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 183 GGYCEEGRLEEA----RALFDEMPKRNVVTWTTMVSGYARNRRVDVAR----KLFEVMPE 234
G C+ G L+ A L ++ PK +V+T+ ++ G +N + A K+ E
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 235 RNEVSWTAMLMGYTHSGRMREASEFF-DAMP---VKPVVACNEMIMGFGFDGDVDRAKAV 290
+ ++ ++ GY G ++ A DA+ V +I G +G+ +RA A+
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 291 FEKMRER----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXX 346
F + + + ++ +IK +G LEA L M +G
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI--------------- 423
Query: 347 XXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRA----KWIFNRYPLKDVVM 402
++ + L+ K G + A K + ++ D+
Sbjct: 424 --------------------PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 403 WNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMK 462
+N +I GYS E AL + M +GV PD ++ +L+ + K ++ E +++M
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 463 CKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGACRTHMKL 519
K P + + +++ L R ++++A+ ++E+M + PDA+ +G+L+ + L
Sbjct: 524 EK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 520 DLAEVAVEKLAQ-LEPKNAGP-YVLLSHMYASK 550
D A K+ + + ++ P Y ++ H + K
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 236/519 (45%), Gaps = 41/519 (7%)
Query: 18 QCTSTGAISRYARIGQIENARKVFDE--TPHIHRTTSSWNAMVAAYFQAHQPHQAVTLFE 75
Q T T I + G +++A ++ DE + I + +++ + + + A+ LF+
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFD 363
Query: 76 TT----PEKNIVSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEG 127
P N V+++ ++ F KNG + +A + M V +V ++++G+++
Sbjct: 364 KMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQ 423
Query: 128 NVEEAERLFWRMPEK---NVVSWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTN 180
EEA +LF E NV +L L K + ++A +L M + +VV+ N
Sbjct: 424 KHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 181 MIGGYCEEGRLEEARALFDEMPKR----NVVTWTTMVSGYARN----RRVDVARKLFEVM 232
++ G+C + ++ AR +F + ++ N T++ ++ G RN ++V +
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 233 PERNEVSWTAMLMGYTHSGRMREASEFFDAM--PVKPVVAC---NEMIMGFGFDGDVDRA 287
E N V + ++ G G+ +A E M + V+C N +I GF +G++D A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 288 KAVFEKM----RERDDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXX 343
A +E+M + T+++++ + +AL + M+ +G L+ P
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 344 XXXXXXXDHGRQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIFNRYPLKDVV-- 401
+ + + L+ + + ++LI+ + G++V A ++ + LKD +
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM-LKDGLRC 722
Query: 402 ---MWNSMITGYSQHGLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIF 458
+ ++I G + G A ++ +M G+ PD+I + +++ S G+ + ++F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 459 ESMKCKYQVEPGIEHYACMVDLLGRAGQVNDAVEIVEKM 497
E MK K V P + Y ++ R G +++A + ++M
Sbjct: 783 EEMK-KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 206/451 (45%), Gaps = 42/451 (9%)
Query: 28 YARIGQIENARKVFDETPHIHRTTSSWN--AMVAAYFQAHQPHQAVTLFETTPEK---NI 82
+ + G++E A + + + + T S ++ ++ + + + +A+ LF+ + E N+
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 83 VSWNGMVSGFVKNGMVAEARRVFDAMPVR----NVVSWTSMVRGYVQEGNVEEAERLFWR 138
N ++S K G EA + M R NVVS+ +++ G+ ++ N++ A +F
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 139 MPEK----NVVSWTVMLGGLLKDSRVEDARKLFDMMPVKDV----VAVTNMIGGYCEEGR 190
+ EK N ++++++ G ++ ++A ++ + M ++ V +I G C+ G+
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 191 LEEARALFDEM--PKR---NVVTWTTMVSGYARNRRVDVARKLFEVM----PERNEVSWT 241
+AR L M KR + +++ +++ G+ + +D A +E M N +++T
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 242 AMLMGYTHSGRMREASEFFDAMPVKPV----VACNEMIMGFGFDGDVDRAKAVFEKMRER 297
+++ G + RM +A E D M K V A +I GF +++ A A+F ++ E
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 298 ----DDGTWSAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHG 353
++++I + G + AL L+ +M ++G +
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 354 RQVHARLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF------NRYPLKDVVMWNSMI 407
+++ + D + + ++ K G V+ +F N P +V+++N++I
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP--NVLIYNAVI 801
Query: 408 TGYSQHGLGEEALNVFRDMCLSGVPPDDISF 438
G+ + G +EA + +M G+ PD +F
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/585 (19%), Positives = 233/585 (39%), Gaps = 86/585 (14%)
Query: 9 RVCMVQVRFQCTSTGAISRYARIGQIENARKVFDETPHIHRTTSSWNAMVAAYFQAHQPH 68
R + +R+ TS + ++ ++ K F + ++N ++ AY + Q
Sbjct: 125 RASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFG----FEVNSRAFNYLLNAYSKDRQTD 180
Query: 69 QAVTLFETTPEKNIVSW----NGMVSGFVKNGMVAEARRVFDAMPVRNV----VSWTSMV 120
AV + E +++ + N +S V+ + EA+ ++ M V V+ ++
Sbjct: 181 HAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLM 240
Query: 121 RGYVQEGNVEEA--------ER---------------------------LFWRMPEKNVV 145
R ++E EA ER L M EK +
Sbjct: 241 RASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLC 300
Query: 146 -----SWTVMLGGLLKDSRVEDARKLFDMMPVK----DVVAVTNMIGGYCEEGRLEEARA 196
++T ++ +K ++DA +L D M +VVA T++I G+C+ L A
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 197 LFDEM----PKRNVVTWTTMVSGYARNRRVDVARKLFEVM------PERNEVSWTAMLMG 246
LFD+M P N VT++ ++ + +N ++ A + ++ M P V ++ G
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH--TIIQG 418
Query: 247 YTHSGRMREASEFFDA---MPVKPVVACNEMIMGFGFDGDVDRAKAVFEKMRERDDGTW- 302
+ + EA + FD + V CN ++ G D A + KM R G
Sbjct: 419 WLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 303 ----SAMIKVYERKGFELEALGLFARMQREGAALNFPXXXXXXXXXXXXXXXDHGRQVHA 358
+ M+ +K +L + +F+ + +G N + +V
Sbjct: 479 VSYNNVMLGHCRQKNMDLARI-VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 359 RLVRSEFDQDLYVASALITMYVKCGDLVRAKWIF-NRYPLKDVVM----WNSMITGYSQH 413
+ S + + V +I K G +A+ + N K + + +NS+I G+ +
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 414 GLGEEALNVFRDMCLSGVPPDDISFIGVLSACSYSGKVKEGREIFESMKCKYQVEPGIEH 473
G + A+ + +MC +G+ P+ I++ +++ + ++ + E+ + MK K V+ I
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-GVKLDIPA 656
Query: 474 YACMVDLLGRAGQVNDAVEIVEKM---PMEPDAIVWGSLLGACRT 515
Y ++D + + A + ++ + P ++ SL+ R
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701