Miyakogusa Predicted Gene

Lj1g3v2536090.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2536090.1 tr|G7KY72|G7KY72_MEDTR BTB/POZ domain-containing
protein OS=Medicago truncatula GN=MTR_7g073980 PE=4,86.61,0,seg,NULL;
no description,BTB/POZ fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; NPH3,NPH3; B,CUFF.29118.1
         (606 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   698   0.0  
AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   623   e-178
AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   507   e-144
AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   460   e-129
AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   434   e-122
AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   422   e-118
AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   380   e-105
AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   344   8e-95
AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   341   8e-94
AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   327   1e-89
AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   319   4e-87
AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   316   2e-86
AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   311   8e-85
AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   311   8e-85
AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   308   9e-84
AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   306   3e-83
AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   301   7e-82
AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   300   2e-81
AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   295   7e-80
AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family...   272   5e-73
AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive ...   264   1e-70
AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   249   5e-66
AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   249   5e-66
AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   249   5e-66
AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family...   246   3e-65
AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family...   245   7e-65
AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   243   2e-64
AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   239   4e-63
AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family...   230   2e-60
AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   226   5e-59
AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   216   3e-56
AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   208   9e-54
AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   191   1e-48
AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   177   3e-44
AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   175   7e-44
AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   169   4e-42
AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   162   6e-40
AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   161   2e-39
AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   140   3e-33
AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   120   2e-27
AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...    64   3e-10
AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...    62   1e-09

>AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2602258-2604412 REVERSE LENGTH=617
          Length = 617

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/600 (60%), Positives = 440/600 (73%), Gaps = 26/600 (4%)

Query: 19  FSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAK--GSNLSNLELL 76
           FS+SF TRIF+DVAGDITIVVDGESFLLHKFPLV   GKIRKMVAE K   SNLS+ EL 
Sbjct: 22  FSSSFATRIFSDVAGDITIVVDGESFLLHKFPLVARCGKIRKMVAEMKESSSNLSHTELR 81

Query: 77  NFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEI 136
           +FPGG +TFELAMKFCYG+NFEIT  NV  +RCAA YLEMTE+++E NL+ RT+TYL ++
Sbjct: 82  DFPGGSKTFELAMKFCYGINFEITISNVVAIRCAAGYLEMTEDFKEENLIARTETYLEQV 141

Query: 137 VFQSLQKSVEVLSTCEML-PPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGESK 195
            F+SL+KSVEVL +CE L P D+ +   I   CVEAIA+NAC+EQL  GLS+L+   ES 
Sbjct: 142 AFRSLEKSVEVLCSCETLYPQDIAETAHIPDRCVEAIAVNACREQLVLGLSRLNRGTESG 201

Query: 196 ELKEG-CVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQF 254
           ELK G    WW+EDLS L ID++ RV+SAM R G+ S++II+SL+HYA+ SLKGI   + 
Sbjct: 202 ELKRGDSPEWWIEDLSALRIDYYARVVSAMARTGLRSESIITSLMHYAQESLKGIRNCK- 260

Query: 255 WNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXX 314
               RT       E +QR ++E +VSL P D   ++PL+FLFGML++ I +   ISC+  
Sbjct: 261 ---ERTKLDSGTFENEQRNVLEAIVSLFPND---NVPLSFLFGMLRVGITINVAISCRLE 314

Query: 315 XXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXX-----X 369
                      VSLDDLLIP ++ GDS++DVDTVHR+LV FL++I               
Sbjct: 315 LERRIAQQLETVSLDDLLIPVVRDGDSMYDVDTVHRILVCFLKKIEEEEEYDEDCCYENE 374

Query: 370 XXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAI 429
                GS CH SLLKVG++MDAYLAEIAPDPCLSL KF+ALIE LPDYARV+DDGLYRAI
Sbjct: 375 TENLTGSMCHSSLLKVGRIMDAYLAEIAPDPCLSLHKFMALIEILPDYARVMDDGLYRAI 434

Query: 430 DIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNA 489
           D++LK H +L EQECK LCKFID QKLSQEACNH AQNDRLP+QMVV+VLY EQLR+KN 
Sbjct: 435 DMFLKGHPSLNEQECKSLCKFIDTQKLSQEACNHVAQNDRLPMQMVVRVLYSEQLRMKNV 494

Query: 490 XXXXXXX--XXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQM 547
                        Q+ SS  PS A+SPRD YASLRRENRELKLEISR+RVRL+ELEKEQ+
Sbjct: 495 MSGESGEGLLLSSQKHSSENPSRAVSPRDTYASLRRENRELKLEISRVRVRLTELEKEQI 554

Query: 548 FMKQGMIDKAGNGRTFLTSISKGIGRIAMFSSQGG---GKRQKSVRKSR---EGKTGRSR 601
            MKQGM++K+G+G T LTS+SKGIGRI++F   GG   GK + + RKS+   E KT RSR
Sbjct: 555 LMKQGMMEKSGHGGTLLTSLSKGIGRISIFG--GGPTEGKLRNANRKSKSRLERKTVRSR 612


>AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2631130-2633166 FORWARD LENGTH=582
          Length = 582

 Score =  623 bits (1606), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 337/603 (55%), Positives = 418/603 (69%), Gaps = 47/603 (7%)

Query: 10  SKRSPATPNFSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSN 69
           + RS   P    +FTTRIF+DVAGDI +VVDGESFLLHKFPLV  SGK+RKMV + K S+
Sbjct: 17  NNRSSVPP----TFTTRIFSDVAGDIIVVVDGESFLLHKFPLVARSGKMRKMVRDLKDSS 72

Query: 70  LSNLELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRT 129
            S +EL +FPGG  TFEL MKFCYG+NF+IT FNV  LRCAA YLEMTE+Y+E+NL+ R 
Sbjct: 73  -SMIELRDFPGGPSTFELTMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRA 131

Query: 130 DTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLD 189
           + YL++IVF+S  +SV VL +CE    ++ +   I   CVEAIAMNAC++QL SGLS+  
Sbjct: 132 ENYLDQIVFRSFHESVLVLCSCET--QEIAETYEIPDRCVEAIAMNACRKQLVSGLSE-- 187

Query: 190 CDGESKELK-EGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKG 248
                 ELK   C+  W E+LS L ID++ +V+SAM R+ V S++I++SL+HYA++SLKG
Sbjct: 188 ------ELKGRDCLEMWTEELSALGIDYYVQVVSAMARLSVRSESIVASLVHYAKTSLKG 241

Query: 249 IGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSS-----IPLTFLFGMLKMAI 303
           I                   ++QR IVE +V+L+P D+  S     IPL FLFGMLK+  
Sbjct: 242 IIDRNC--------------QEQRKIVEAMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGT 287

Query: 304 MLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXX 363
           ++   ISC+              SLDDLLIPS+Q+ DS++DVDTVHR+L  FL+RI    
Sbjct: 288 IIDIEISCRLELERRIGHQLETASLDDLLIPSVQNEDSMYDVDTVHRILTFFLERIEEED 347

Query: 364 XXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDD 423
                       +  H SLLKVG++MDAYL EIAPDP LSL KF A+IE LP+++R++DD
Sbjct: 348 DECGYDSD---STGQHSSLLKVGRIMDAYLVEIAPDPYLSLHKFTAIIETLPEHSRIVDD 404

Query: 424 GLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQ 483
           G+YRAID+YLKAH  LTE+E KKLC FIDC+KLSQEA NH AQNDRLPVQMVV+VLY EQ
Sbjct: 405 GIYRAIDMYLKAHPLLTEEERKKLCNFIDCKKLSQEASNHVAQNDRLPVQMVVRVLYTEQ 464

Query: 484 LRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELE 543
           LRLK A             + SGV S A+SPRD YA+LRRENRELKLEISR+RVR+SELE
Sbjct: 465 LRLKKALSGDSEEGSWV--LPSGVQSRAVSPRDTYAALRRENRELKLEISRMRVRVSELE 522

Query: 544 KEQMFMKQGMIDKAG-NGRTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSR---EGKTGR 599
           KE   MK  M++K+G NG TFLTS+SKGIGRIA F   GG  RQK  RKSR   E K+ R
Sbjct: 523 KEHNLMKHEMMEKSGNNGGTFLTSLSKGIGRIATF---GGETRQKVNRKSRSVSERKSSR 579

Query: 600 SRR 602
           S R
Sbjct: 580 SGR 582


>AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19786881-19789003 FORWARD LENGTH=614
          Length = 614

 Score =  507 bits (1306), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/568 (48%), Positives = 376/568 (66%), Gaps = 39/568 (6%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           IF DV  DITI V+G +F LHKFPLV+ SG+IR++VAE + S++S +ELLN PGG +TFE
Sbjct: 37  IFRDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLNLPGGAETFE 96

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           LA KFCYG+NFEIT+ NVA+L C ++YLEMTEEY + NL +RT+ YL  IV ++L+  V+
Sbjct: 97  LAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQ 156

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGE-----SKELKEGC 201
           VL   E+L P + DE+ I   C++AIA  AC EQ+AS  S+L+         S+++K   
Sbjct: 157 VLKQSEILLP-LADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQVKSSG 215

Query: 202 VA--WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSR 259
               WW+EDLSVL ID +QRV++AM   GV  ++I +SL+ YAE  L             
Sbjct: 216 DGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAEREL------------- 262

Query: 260 TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXX 319
                T   + ++TIVET+V+L+P + +  +P++FLFG+L+ A++L  ++SC+       
Sbjct: 263 -----TKRSEHEQTIVETIVTLLPVE-NLVVPISFLFGLLRRAVILDTSVSCRLDLERRL 316

Query: 320 XXXXXMVSLDDLLIPSL-QSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXX-XXVGSN 377
                M +LDDLLIPS   +GD+LFD+DTVHR+LVNF Q+                  S 
Sbjct: 317 GSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFSQQGGDDSEDEESVFECDSPHSP 376

Query: 378 CHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHT 437
              ++ KV +L+D+YLAEIAPD  L L KF+ + EALP +AR + DGLYRAID+YLKAH 
Sbjct: 377 SQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHARTLHDGLYRAIDLYLKAHQ 436

Query: 438 TLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNA-------- 489
            L++ + KKL K ID QKLSQEA  HAAQN+RLP+Q +VQVLY EQL+L+++        
Sbjct: 437 GLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLKLRSSLCSSYSDE 496

Query: 490 XXXXXXXXXXXQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFM 549
                       RI+SG  SA MSP+DNYASLRRENRELKLE++RLR+RL++LEKE + M
Sbjct: 497 EPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELARLRMRLNDLEKEHICM 556

Query: 550 KQGMIDKAGNGRTFLTSISKGIGRIAMF 577
           K+ M  +  + R F++S SK +G+++ F
Sbjct: 557 KRDM--QRSHSRKFMSSFSKKMGKLSFF 582


>AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:693480-696188 FORWARD LENGTH=634
          Length = 634

 Score =  460 bits (1183), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/608 (44%), Positives = 368/608 (60%), Gaps = 37/608 (6%)

Query: 29  ADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELA 88
           +DV+ D+T+ V   SF LHKFPLV+ SGKIRK++A+ K   +SN+ L N PGG + FELA
Sbjct: 34  SDVSSDLTVQVGSSSFCLHKFPLVSRSGKIRKLLADPK---ISNVCLSNAPGGSEAFELA 90

Query: 89  MKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVL 148
            KFCYG+N EI   N+A+LRCA+ YLEMTE++ E NL ++T+ +L E +F S+  S+ VL
Sbjct: 91  AKFCYGINIEINLLNIAKLRCASHYLEMTEDFSEENLASKTEHFLKETIFPSILNSIIVL 150

Query: 149 STCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELK-EGCVAWWVE 207
             CE L P + +++ +    + A+A NACKEQL SGL KLD       ++ +  + WW +
Sbjct: 151 HHCETLIP-VSEDLNLVNRLIIAVANNACKEQLTSGLLKLDYSFSGTNIEPQTPLDWWGK 209

Query: 208 DLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKG-IGKSQFWNPSRTNSSPTN 266
            L+VL++DFFQRVISA+   G+  D I   LI Y   SL+G I +       R   S   
Sbjct: 210 SLAVLNLDFFQRVISAVKSKGLIQDVISKILISYTNKSLQGLIVRDPKLEKERVLDS--E 267

Query: 267 GEKDQRTIVETLVSLMPTD-KSSSIPLTFLFGMLKMAIMLGATIS---CKXXXXXXXXXX 322
           G+K QR IVET+V L+PT  + SS+P+ FL  +LKM I   ++ S   C+          
Sbjct: 268 GKKKQRLIVETIVRLLPTQGRRSSVPMAFLSSLLKMVIATSSSASTGSCRSDLERRIGLQ 327

Query: 323 XXMVSLDDLLIPSLQSG--DSLFDVDTVHRLLVNFLQ-----------RIXXXXXXXXXX 369
                L+D+LIP   +G  ++++D+D++ R+   FL             +          
Sbjct: 328 LDQAILEDVLIPINLNGTNNTMYDIDSILRIFSIFLNLDEDDEEEEHHHLQFRDETEMIY 387

Query: 370 XXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAI 429
                GS    S+LKV +LMD YLAEIA DP L+  KFIAL E LPD+AR+I DGLYRA+
Sbjct: 388 DFDSPGSPKQSSILKVSKLMDNYLAEIAMDPNLTTSKFIALAELLPDHARIISDGLYRAV 447

Query: 430 DIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNA 489
           DIYLK H  + + E  +LCK ID QKLSQEAC+HAAQN+RLPVQM VQVLY EQ+RL+NA
Sbjct: 448 DIYLKVHPNIKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNA 507

Query: 490 XXXXXXXXXXX---------QRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLS 540
                               QR  SG  S A+SPRDNYAS+RRENRELKLE++R+R+RL+
Sbjct: 508 MSSSIGPTQFLFNSNCHQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLT 567

Query: 541 ELEKEQMFMKQGMIDKAGNGRTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGK--TG 598
           +LEK+ + +KQ ++ K+  G     S +K I ++    S    K   S + S E +    
Sbjct: 568 DLEKDHISIKQELV-KSNPGTKLFKSFAKKISKLNSLFSFSSLKPSLSGKASSESRFLFQ 626

Query: 599 RSRRYSVS 606
           R RR+SVS
Sbjct: 627 RKRRHSVS 634


>AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=635
          Length = 635

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/606 (41%), Positives = 353/606 (58%), Gaps = 47/606 (7%)

Query: 29  ADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELA 88
           +DV  D+TI V   +F LHKFPLV+ SG+IRK+V E+K +NL+   L   PGG ++FELA
Sbjct: 35  SDVTSDLTIEVGSATFSLHKFPLVSRSGRIRKLVLESKDTNLN---LAAVPGGSESFELA 91

Query: 89  MKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVL 148
            KFCYG+  +  + N+A LRC A YLEMTE+  E+NL  RT+ YL + +F  +  S+ VL
Sbjct: 92  AKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKNLEARTEAYLKDSIFNDISNSITVL 151

Query: 149 STCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGES--KELKEGCVAWWV 206
            +CE L P + +EI +    V AIA+NACKEQLASGL KLD        E  + C  WW 
Sbjct: 152 HSCERLLP-VAEEINLVGRLVNAIAVNACKEQLASGLLKLDQSFSCGVPETAKPC-DWWG 209

Query: 207 EDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSPTN 266
             L +L +DFFQRV+SAM   G+  D I   L+ YA  SL+ I +           S ++
Sbjct: 210 RSLPILKLDFFQRVLSAMKSKGLNHDIISDILMSYARKSLQIIREPNLVK------SDSD 263

Query: 267 GEKDQRTIVETLVSLMPTDKS-SSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXM 325
            ++ QR ++E +V L+PT  + SSIP++FL  +LK AI  G ++SC+             
Sbjct: 264 LQRKQRIVLEAVVGLLPTQANKSSIPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQ 323

Query: 326 VSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQ-------------RIXXXXXXXXXXXXX 372
             L+D+LIP+  +  +++D D+V R+   FL                             
Sbjct: 324 AILEDILIPA--NIGAMYDTDSVQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFE 381

Query: 373 XVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIY 432
              S    S+ KV +LMD+YLAE+A D  L   KFIAL E LPD+ARV+ DGLYRA+DI+
Sbjct: 382 GAESPKQSSIFKVSKLMDSYLAEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIF 441

Query: 433 LKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXX 492
           LK H  + + E  +LCK + C+KLSQ+A +HAAQN+RLPVQ+ VQVL+ EQ RLKNA   
Sbjct: 442 LKVHPHMKDSERYRLCKTVSCKKLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTS 501

Query: 493 XXXXXXXXQ--------RISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEK 544
                   Q        R  SG+ S A+SPRDNYAS+RRENREL+LE++R+R+RL++LEK
Sbjct: 502 GGGTGGSNQSQFFLFPNRSGSGMASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEK 561

Query: 545 EQMFMKQGMIDKAGNGRTF--LTSISKGIGRIAMF-----SSQGGGKRQKSVRKSREGKT 597
           + + MK+  +      R +  L  +S+G+ ++        SSQ       S +K  E KT
Sbjct: 562 DHVSMKRDFVKPQSRRRRYGMLRKLSRGLNKLNAIVLRFRSSQSVA---SSGKKHTEEKT 618

Query: 598 GRSRRY 603
              RR+
Sbjct: 619 NSERRF 624


>AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=658
          Length = 658

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 254/629 (40%), Positives = 353/629 (56%), Gaps = 70/629 (11%)

Query: 29  ADVAGDITIVVDGESFLLHK-----------------------FPLVTLSGKIRKMVAEA 65
           +DV  D+TI V   +F LHK                       FPLV+ SG+IRK+V E+
Sbjct: 35  SDVTSDLTIEVGSATFSLHKVTKFNKLRRKKRNCFTQTRSLLQFPLVSRSGRIRKLVLES 94

Query: 66  KGSNLSNLELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNL 125
           K +NL+   L   PGG ++FELA KFCYG+  +  + N+A LRC A YLEMTE+  E+NL
Sbjct: 95  KDTNLN---LAAVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKNL 151

Query: 126 VTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGL 185
             RT+ YL + +F  +  S+ VL +CE L P + +EI +    V AIA+NACKEQLASGL
Sbjct: 152 EARTEAYLKDSIFNDISNSITVLHSCERLLP-VAEEINLVGRLVNAIAVNACKEQLASGL 210

Query: 186 SKLDCDGES--KELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAE 243
            KLD        E  + C  WW   L +L +DFFQRV+SAM   G+  D I   L+ YA 
Sbjct: 211 LKLDQSFSCGVPETAKPC-DWWGRSLPILKLDFFQRVLSAMKSKGLNHDIISDILMSYAR 269

Query: 244 SSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKS-SSIPLTFLFGMLKMA 302
            SL+ I +           S ++ ++ QR ++E +V L+PT  + SSIP++FL  +LK A
Sbjct: 270 KSLQIIREPNLVK------SDSDLQRKQRIVLEAVVGLLPTQANKSSIPISFLSSLLKTA 323

Query: 303 IMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQ----- 357
           I  G ++SC+               L+D+LIP+  +  +++D D+V R+   FL      
Sbjct: 324 IGSGTSVSCRSDLERRISHLLDQAILEDILIPA--NIGAMYDTDSVQRIFSMFLNLDECE 381

Query: 358 --------RIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIA 409
                                     S    S+ KV +LMD+YLAE+A D  L   KFIA
Sbjct: 382 YRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYLAEVALDSSLPPSKFIA 441

Query: 410 LIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDR 469
           L E LPD+ARV+ DGLYRA+DI+LK H  + + E  +LCK + C+KLSQ+A +HAAQN+R
Sbjct: 442 LAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCKKLSQDASSHAAQNER 501

Query: 470 LPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQ--------RISSGVPSAAMSPRDNYASL 521
           LPVQ+ VQVL+ EQ RLKNA           Q        R  SG+ S A+SPRDNYAS+
Sbjct: 502 LPVQIAVQVLFYEQTRLKNAMTSGGGTGGSNQSQFFLFPNRSGSGMASGAISPRDNYASV 561

Query: 522 RRENRELKLEISRLRVRLSELEKEQMFMKQGMIDKAGNGRTF--LTSISKGIGRIAMF-- 577
           RRENREL+LE++R+R+RL++LEK+ + MK+  +      R +  L  +S+G+ ++     
Sbjct: 562 RRENRELRLEVARMRMRLTDLEKDHVSMKRDFVKPQSRRRRYGMLRKLSRGLNKLNAIVL 621

Query: 578 ---SSQGGGKRQKSVRKSREGKTGRSRRY 603
              SSQ       S +K  E KT   RR+
Sbjct: 622 RFRSSQSVA---SSGKKHTEEKTNSERRF 647


>AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26884754-26887083 FORWARD LENGTH=604
          Length = 604

 Score =  380 bits (976), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/600 (39%), Positives = 351/600 (58%), Gaps = 42/600 (7%)

Query: 30  DVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEA-KGSNLSNLELLNFPGGYQTFELA 88
           +V+ D+T+ V   SF LHKFPL++  G I+K+V+E+ K S+ + +++ + PGG + FELA
Sbjct: 24  EVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESSKDSDSTVIKIPDIPGGSEAFELA 83

Query: 89  MKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVL 148
            KFCYG+NF+++T N+A LRCAAEYLEMTEE+   NLV R + YLNE+  +SL  S+ VL
Sbjct: 84  AKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLVVRAEAYLNEVALKSLSSSITVL 143

Query: 149 STCEMLPPDMVDEIRISKGCVEAIAMNACKE-QLASGLSKLDCDGE---SKELKEGCVAW 204
              E L P + + +++   C++AIA   C+E    S  S    + E    ++ K+  V W
Sbjct: 144 HKSEKLLP-IAERVKLVSRCIDAIAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQPVVDW 202

Query: 205 WVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSP 264
           W EDL+VL ID FQRV+ AM   G     +   L+ YA+ SL+G+   + +        P
Sbjct: 203 WAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYAQKSLRGL---EIFGKGMKKIEP 259

Query: 265 TNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXX 324
              E ++R I+ET+VSL+P +K++ + ++FL  +L+ AI L  T++C+            
Sbjct: 260 KQ-EHEKRVILETIVSLLPREKNA-MSVSFLSMLLRAAIFLETTVACRLDLENRMGLQLG 317

Query: 325 MVSLDDLLIPSLQ-SGD-SLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSL 382
              LDDLLIPS   +GD S+FD DTV R+L+N+L+                 G +  G +
Sbjct: 318 QAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLE------FEVEGVRLSNNGVDLAGDM 371

Query: 383 LKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQ 442
            +VG+L++ Y+AEIA D  +SL KFI L E +P+ +RV +DG+YRA+DIYLKAH  +++ 
Sbjct: 372 ERVGKLLENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMYRAVDIYLKAHPNMSDV 431

Query: 443 ECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQR 502
           E KK+C  +DCQKLS+EAC HAAQNDRLPVQ +VQVLY EQ RL+               
Sbjct: 432 ERKKVCSLMDCQKLSREACAHAAQNDRLPVQTIVQVLYYEQQRLRGEVTNDSDSPAPPPP 491

Query: 503 ISSGVPSAAMSP-RDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQGM-------- 553
             + V    +S   D  + L+REN++LKLE+ +++++L E EKE                
Sbjct: 492 QPAAVLPPKLSSYTDELSKLKRENQDLKLELLKMKMKLKEFEKESEKKTSSSTISTNPSS 551

Query: 554 -IDKAGNG------RTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKTGRSRRYSVS 606
            I  A  G      ++F+ S+SK +G++  FS      R ++       K  + RR+S+S
Sbjct: 552 PISTASTGKPPLPRKSFINSVSKKLGKLNPFSITPYNGRGRT-------KPPKDRRHSIS 604


>AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:10759475-10762199 FORWARD LENGTH=665
          Length = 665

 Score =  344 bits (883), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 214/579 (36%), Positives = 322/579 (55%), Gaps = 45/579 (7%)

Query: 34  DITIVVDGESFLLHKFPLVTLSGKIRKMVAEA--KGSNLSNLELLNFPGGYQTFELAMKF 91
           DI + V   SF LHKFPL++ SG + + +AEA  +G +   +E+ + PGG +TFEL  KF
Sbjct: 29  DIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKF 88

Query: 92  CYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTC 151
           CYG+  E+T  NV  LRCAAE+LEMTEE+ E NL+++T+T+ N++V +S + S++ L +C
Sbjct: 89  CYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSIKALHSC 148

Query: 152 -EMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGESK--------------- 195
            E+L  +  DE+ I+K C+E++AM A  +    G   ++  G  +               
Sbjct: 149 DEVL--EYADELNITKKCIESLAMRASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGA 206

Query: 196 ELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFW 255
             K     WW ED S+LS   F+R+I+ M   G+  D I  SL +Y    L G+ K +  
Sbjct: 207 RPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGL-KRRRG 265

Query: 256 NPSRTN--SSPTNG-----EKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGAT 308
            P  +   S+P        E++Q+ ++E +  L+   K   +P  F   ML++A +L A+
Sbjct: 266 GPESSGRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGL-VPTKFFVDMLRIAKILKAS 324

Query: 309 ISCKXXXXXXXXXXXXMVSLDDLLIPSL-QSGDSLFDVDTVHRLLVNFLQRIXXXXXXXX 367
             C               +L+DL++PS   + ++L+DVD+V R+L +FL           
Sbjct: 325 PDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIMPGGVG 384

Query: 368 XXXXXXVGSNCHGS------LLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVI 421
                    N  GS      +  V +L+D YLAE+APD  L LPKF AL  ++P+YAR++
Sbjct: 385 SPCSSVDDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLL 444

Query: 422 DDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYV 481
           DDGLYRAIDIYLK H  L E E + LC+ +DCQKLS EAC HAAQN+RLP++++VQVL+ 
Sbjct: 445 DDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFF 504

Query: 482 EQLRLKNAXX----XXXXXXXXXQRISSG----VPSAAMSPRDNYASLRRENRELKLEIS 533
           EQL+L+ +               +++ SG     P+        +A+  REN+ LK+ + 
Sbjct: 505 EQLQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWATAVRENQVLKVGMD 564

Query: 534 RLRVRLSELEKEQMFMKQGMIDKAGNGRTFLTSISKGIG 572
            +R+R+ ELEKE   M+Q  I+K G       S S G+G
Sbjct: 565 SMRMRVCELEKECSNMRQ-EIEKLGKTTKGGGSASNGVG 602


>AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19600465-19602088 FORWARD LENGTH=517
          Length = 517

 Score =  341 bits (875), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 208/519 (40%), Positives = 292/519 (56%), Gaps = 44/519 (8%)

Query: 116 MTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMN 175
           MTE+  E+NL  RT+ YL + +F  +  S+ VL +CE L P + +EI +    V AIA+N
Sbjct: 1   MTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLP-VAEEINLVGRLVNAIAVN 59

Query: 176 ACKEQLASGLSKLDCDGES--KELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDN 233
           ACKEQLASGL KLD        E  + C  WW   L +L +DFFQRV+SAM   G+  D 
Sbjct: 60  ACKEQLASGLLKLDQSFSCGVPETAKPC-DWWGRSLPILKLDFFQRVLSAMKSKGLNHDI 118

Query: 234 IISSLIHYAESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKS-SSIPL 292
           I   L+ YA  SL+ I +           S ++ ++ QR ++E +V L+PT  + SSIP+
Sbjct: 119 ISDILMSYARKSLQIIREPNLVK------SDSDLQRKQRIVLEAVVGLLPTQANKSSIPI 172

Query: 293 TFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLL 352
           +FL  +LK AI  G ++SC+               L+D+LIP+  +  +++D D+V R+ 
Sbjct: 173 SFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA--NIGAMYDTDSVQRIF 230

Query: 353 VNFLQ-------------RIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPD 399
             FL                                S    S+ KV +LMD+YLAE+A D
Sbjct: 231 SMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYLAEVALD 290

Query: 400 PCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQE 459
             L   KFIAL E LPD+ARV+ DGLYRA+DI+LK H  + + E  +LCK + C+KLSQ+
Sbjct: 291 SSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCKKLSQD 350

Query: 460 ACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQ--------RISSGVPSAA 511
           A +HAAQN+RLPVQ+ VQVL+ EQ RLKNA           Q        R  SG+ S A
Sbjct: 351 ASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGTGGSNQSQFFLFPNRSGSGMASGA 410

Query: 512 MSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQGMIDKAGNGRTF--LTSISK 569
           +SPRDNYAS+RRENREL+LE++R+R+RL++LEK+ + MK+  +      R +  L  +S+
Sbjct: 411 ISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVKPQSRRRRYGMLRKLSR 470

Query: 570 GIGRIAMF-----SSQGGGKRQKSVRKSREGKTGRSRRY 603
           G+ ++        SSQ       S +K  E KT   RR+
Sbjct: 471 GLNKLNAIVLRFRSSQSVA---SSGKKHTEEKTNSERRF 506


>AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005573 REVERSE LENGTH=593
          Length = 593

 Score =  327 bits (839), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 211/621 (33%), Positives = 334/621 (53%), Gaps = 52/621 (8%)

Query: 2   VSENSLSSSKRSPATPNFSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKM 61
           ++ NS+SSS        FS         D+  D+ + V   +F LHKF LV  S  IRK+
Sbjct: 9   INMNSMSSSLARTGQWVFSQ--------DIPTDVVVEVGEANFSLHKFMLVAKSNYIRKL 60

Query: 62  VAEAKGSNLSNLELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYR 121
           + E+K S+++ + L + PGG + FE A KFCYG+NFEIT  NVA L CAAE+L+MT++Y 
Sbjct: 61  IMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYC 120

Query: 122 ERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQL 181
           + NL  RT  +L+++   SL  ++ VL +CE+L P +  ++ I + CV+ +   AC E +
Sbjct: 121 DNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLP-ISRDLGIVRRCVDVVGAKACNEAM 179

Query: 182 ASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHY 241
                   C             WW E+L +L +DFF  V+S+M + GV   ++ S++I Y
Sbjct: 180 ------FPCRTPPN--------WWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITY 225

Query: 242 AESSLKGIGKSQFWNPSRTNSSPTNGEKD----QRTIVETLVSLMPTDKSSSIPLTFLFG 297
            E SL+ + +       +  S P + E D    QR +V+++VSL+P+DK    P+ FL  
Sbjct: 226 TEKSLRDLVRDHSGRGVKY-SDPGDNESDERSQQRDLVQSIVSLLPSDK-GLFPVNFLCS 283

Query: 298 MLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFL 356
           +L+ A+ L  +++CK             VS+DDLLIPS    G+ L D+D+V R++  F+
Sbjct: 284 LLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFV 343

Query: 357 QRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPD 416
           ++               V   C  SL +V + +D+YLAEIA    L++ KF A+   +P 
Sbjct: 344 EKEKNVGVFNGGDFNRGV---CSVSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPK 400

Query: 417 YARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVV 476
            AR  DD LYRAIDI+LKAH  L E E +K+C  +D  KLS +A  HA+QN RLPV +V+
Sbjct: 401 SARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVL 460

Query: 477 QVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYA--SLRRENRELKLEISR 534
             LY +QL+L++            +R    +P A  +     A  +L +EN  L+ E+ +
Sbjct: 461 HALYYDQLKLRSG------VAEQEERAVVVLPEALKTRSQLQADTTLAKENEALRSELMK 514

Query: 535 LRVRLSELEKEQ------MFMKQGMIDKAGNGRTFLTSISKGIGRIAMFSSQGGGKRQKS 588
           +++ +S+++K +            ++    +  TF +S+SK +G++  F  + G K    
Sbjct: 515 MKMYVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPF--KNGSKDTSH 572

Query: 589 VRKSREG---KTGRSRRYSVS 606
           + +   G      R RR+S+S
Sbjct: 573 IDEDLGGVDITKPRRRRFSIS 593


>AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:774591-776855 FORWARD LENGTH=592
          Length = 592

 Score =  319 bits (817), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 204/558 (36%), Positives = 301/558 (53%), Gaps = 66/558 (11%)

Query: 31  VAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSN--LELLNFPGGYQTFELA 88
           +  D+TI V    F LHKFPL++ SG + +++ E+   + S   L L   PGG +TFEL 
Sbjct: 26  LVSDVTIEVGDMKFHLHKFPLLSRSGLLERLIEESSTDDGSGCVLSLDEIPGGGKTFELV 85

Query: 89  MKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVL 148
            KFCYG+  E+T FNV  LRCAAEYLEMT+ Y E NLV  T+T+LNE VF +   S++ L
Sbjct: 86  TKFCYGVKIELTAFNVVSLRCAAEYLEMTDNYGEGNLVGMTETFLNE-VFGNWTDSIKAL 144

Query: 149 STCEMLPPDMVDEIRISKGCVEAIAMNACKE----QLASGLSKLDCDGESKE----LKEG 200
            TCE +  D  +++ I   CV+++A+ AC +        G  K    G++ E    L  G
Sbjct: 145 QTCEEVI-DYAEDLHIISRCVDSLAVKACADPSLFNWPVGGGKNATSGQNTEDESHLWNG 203

Query: 201 CVA-----------WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGI 249
             A           WW +D S LS+  F+R+I+A+   G+  +NI  ++++Y    +  +
Sbjct: 204 ISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLM 263

Query: 250 GKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATI 309
            + Q     +   +P   E+DQ+T +E +V L+P+ K  + P  FL  +L+ A++L A+ 
Sbjct: 264 NR-QVNMDEQVIETPNPSEEDQKTCLEEIVGLLPSKKGVN-PTKFLLRLLQTAMVLHASQ 321

Query: 310 SCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXX 369
           S +              +L DLLIP++   ++L+DV+ V R++  F+             
Sbjct: 322 SSRENLERRIGNQLDQAALVDLLIPNMGYSETLYDVECVLRMIEQFVS---------STE 372

Query: 370 XXXXVGSNC---HGSLLK-----------VGQLMDAYLAEIAPDPCLSLPKFIALIEALP 415
               V S C    G L+K           V  L+D YLAE+APD  L L KF A+  A+P
Sbjct: 373 QAGIVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIP 432

Query: 416 DYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMV 475
           DYAR +DDG+Y AID+YLKAH  +T+ E + +C+ ++CQKLS EA  HAAQN+RLP++++
Sbjct: 433 DYARPLDDGVYHAIDVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVI 492

Query: 476 VQVLYVEQLRLKNAXXXXXXXXXXXQRISS--GVPSAAMSPRDNYASLRRENRELKLEIS 533
           VQVL+ EQLRL+ +               +  G     + PR        EN        
Sbjct: 493 VQVLFFEQLRLRTSVSGWFFVSENLDNPDNQHGANGGLLKPRG-------EN-------- 537

Query: 534 RLRVRLSELEKEQMFMKQ 551
            +R R+SELEKE M MKQ
Sbjct: 538 -VRERVSELEKECMNMKQ 554


>AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26564368-26566662 FORWARD LENGTH=668
          Length = 668

 Score =  316 bits (810), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/636 (33%), Positives = 319/636 (50%), Gaps = 103/636 (16%)

Query: 31  VAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELL-------------- 76
           +  DI I VD  +F LHKFPL++ S K+ +++ E +  + S++ L+              
Sbjct: 19  LPSDIEIEVDDMTFHLHKFPLMSKSRKLHRLITEQETRSSSSMALITVIDPKVEETDKKG 78

Query: 77  ------------------------------NFPGGYQTFELAMKFCYGMNFEITTFNVAR 106
                                         +FPG  ++FE+  KFCYG+  +++   V  
Sbjct: 79  KGHEIEDDKEEEEVEEQEIEENGYPHIKLEDFPGSSESFEMVAKFCYGVKMDLSASTVVP 138

Query: 107 LRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISK 166
           LRCAAE+LEMTEEY   NL+++T+ +L+  V++SL++S++ L  CE + P +   + I++
Sbjct: 139 LRCAAEHLEMTEEYSPDNLISKTERFLSHSVYKSLRESIKALKACESVSP-LAGSLGITE 197

Query: 167 GCVEAIAMNACKEQLA------------SGLSKLD--------CDGESKELKEGCVAWWV 206
            C+++I   A     +              +S  D             K  ++  +  W 
Sbjct: 198 QCIDSIVSRASSADPSLFGWPVNDGGGRGNISATDLQLIPGGAAKSRKKPSRDSNMELWF 257

Query: 207 EDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSPTN 266
           EDL+ LS+  F+ VI +M    + SD I S LI YA+  + GI +S    PS  +SS   
Sbjct: 258 EDLTQLSLPIFKTVILSMRSGDLSSDIIESCLICYAKKHIPGILRSNRKPPS--SSSTAV 315

Query: 267 GEKDQRTIVETLVSLMPTDKSS-SIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXM 325
            E +QR ++ET+ S +P DKSS S    FLFG+L+ AI+L A   C+             
Sbjct: 316 SENEQRELLETITSNLPLDKSSISSTTRFLFGLLRTAIILNAAEICRDLLERKIGSQLER 375

Query: 326 VSLDDLLIPSLQS-GDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLK 384
            +LDDLL+PS     ++L+DVD V R+L +FL  +                     SL+ 
Sbjct: 376 ATLDDLLVPSYSYLNETLYDVDLVERILGHFLDTLEQSNTAIVEVDGKS------PSLML 429

Query: 385 VGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQEC 444
           VG+L+D +LAEIA D  L   KF  L  +LPD AR+ DDGLYRA+D+YLKAH  ++E E 
Sbjct: 430 VGKLIDGFLAEIASDANLKSDKFYNLAISLPDQARLYDDGLYRAVDVYLKAHPWVSEAER 489

Query: 445 KKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQRIS 504
           +K+C  +DCQKL+ EAC HAAQN+RLP++ VVQVL+ EQL+L++A               
Sbjct: 490 EKICGVMDCQKLTLEACTHAAQNERLPLRAVVQVLFFEQLQLRHAIAGTLLAAQSPSTSQ 549

Query: 505 SGVPSAAMSPRD--------------------NYASLRRENRELKLEISRLRVRLSELEK 544
           S  P  + + R+                     +    REN+ L+L++  +R R+  LE+
Sbjct: 550 STEPRPSAAIRNLTITEEDGDEAEGERQVDAGKWKKTVRENQVLRLDMDTMRTRVHRLER 609

Query: 545 EQMFMKQ--GMIDKAGNGRTFLT------SISKGIG 572
           E   MK+    IDK G+     T      SI+K  G
Sbjct: 610 ECSNMKKVIAKIDKEGSSPATTTDRPRSWSITKKFG 645


>AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  311 bits (797), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 312/572 (54%), Gaps = 44/572 (7%)

Query: 51  LVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCA 110
           LV  S  IRK++ E+K S+++ + L + PGG + FE A KFCYG+NFEIT  NVA L CA
Sbjct: 2   LVAKSNYIRKLIMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCA 61

Query: 111 AEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVE 170
           AE+L+MT++Y + NL  RT  +L+++   SL  ++ VL +CE+L P +  ++ I + CV+
Sbjct: 62  AEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLP-ISRDLGIVRRCVD 120

Query: 171 AIAMNACKEQLASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVG 230
            +   AC E +        C             WW E+L +L +DFF  V+S+M + GV 
Sbjct: 121 VVGAKACNEAM------FPCRTPPN--------WWTEELCILDVDFFSDVVSSMKQRGVK 166

Query: 231 SDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSPTNGEKD----QRTIVETLVSLMPTDK 286
             ++ S++I Y E SL+ + +       +  S P + E D    QR +V+++VSL+P+DK
Sbjct: 167 PSSLASAIITYTEKSLRDLVRDHSGRGVKY-SDPGDNESDERSQQRDLVQSIVSLLPSDK 225

Query: 287 SSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQ-SGDSLFDV 345
               P+ FL  +L+ A+ L  +++CK             VS+DDLLIPS    G+ L D+
Sbjct: 226 -GLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDL 284

Query: 346 DTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLP 405
           D+V R++  F+++               V   C  SL +V + +D+YLAEIA    L++ 
Sbjct: 285 DSVRRIISAFVEKEKNVGVFNGGDFNRGV---CSVSLQRVAKTVDSYLAEIATYGDLTIS 341

Query: 406 KFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAA 465
           KF A+   +P  AR  DD LYRAIDI+LKAH  L E E +K+C  +D  KLS +A  HA+
Sbjct: 342 KFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHAS 401

Query: 466 QNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYA--SLRR 523
           QN RLPV +V+  LY +QL+L++            +R    +P A  +     A  +L +
Sbjct: 402 QNKRLPVNIVLHALYYDQLKLRSG------VAEQEERAVVVLPEALKTRSQLQADTTLAK 455

Query: 524 ENRELKLEISRLRVRLSELEKEQ------MFMKQGMIDKAGNGRTFLTSISKGIGRIAMF 577
           EN  L+ E+ ++++ +S+++K +            ++    +  TF +S+SK +G++  F
Sbjct: 456 ENEALRSELMKMKMYVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPF 515

Query: 578 SSQGGGKRQKSVRKSREG---KTGRSRRYSVS 606
             + G K    + +   G      R RR+S+S
Sbjct: 516 --KNGSKDTSHIDEDLGGVDITKPRRRRFSIS 545


>AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  311 bits (797), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 312/572 (54%), Gaps = 44/572 (7%)

Query: 51  LVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCA 110
           LV  S  IRK++ E+K S+++ + L + PGG + FE A KFCYG+NFEIT  NVA L CA
Sbjct: 2   LVAKSNYIRKLIMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCA 61

Query: 111 AEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVE 170
           AE+L+MT++Y + NL  RT  +L+++   SL  ++ VL +CE+L P +  ++ I + CV+
Sbjct: 62  AEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLP-ISRDLGIVRRCVD 120

Query: 171 AIAMNACKEQLASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVG 230
            +   AC E +        C             WW E+L +L +DFF  V+S+M + GV 
Sbjct: 121 VVGAKACNEAM------FPCRTPPN--------WWTEELCILDVDFFSDVVSSMKQRGVK 166

Query: 231 SDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSPTNGEKD----QRTIVETLVSLMPTDK 286
             ++ S++I Y E SL+ + +       +  S P + E D    QR +V+++VSL+P+DK
Sbjct: 167 PSSLASAIITYTEKSLRDLVRDHSGRGVKY-SDPGDNESDERSQQRDLVQSIVSLLPSDK 225

Query: 287 SSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQ-SGDSLFDV 345
               P+ FL  +L+ A+ L  +++CK             VS+DDLLIPS    G+ L D+
Sbjct: 226 -GLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDL 284

Query: 346 DTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLP 405
           D+V R++  F+++               V   C  SL +V + +D+YLAEIA    L++ 
Sbjct: 285 DSVRRIISAFVEKEKNVGVFNGGDFNRGV---CSVSLQRVAKTVDSYLAEIATYGDLTIS 341

Query: 406 KFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAA 465
           KF A+   +P  AR  DD LYRAIDI+LKAH  L E E +K+C  +D  KLS +A  HA+
Sbjct: 342 KFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHAS 401

Query: 466 QNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDNYA--SLRR 523
           QN RLPV +V+  LY +QL+L++            +R    +P A  +     A  +L +
Sbjct: 402 QNKRLPVNIVLHALYYDQLKLRSG------VAEQEERAVVVLPEALKTRSQLQADTTLAK 455

Query: 524 ENRELKLEISRLRVRLSELEKEQ------MFMKQGMIDKAGNGRTFLTSISKGIGRIAMF 577
           EN  L+ E+ ++++ +S+++K +            ++    +  TF +S+SK +G++  F
Sbjct: 456 ENEALRSELMKMKMYVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPF 515

Query: 578 SSQGGGKRQKSVRKSREG---KTGRSRRYSVS 606
             + G K    + +   G      R RR+S+S
Sbjct: 516 --KNGSKDTSHIDEDLGGVDITKPRRRRFSIS 545


>AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18527216-18529066 REVERSE LENGTH=526
          Length = 526

 Score =  308 bits (788), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 204/589 (34%), Positives = 311/589 (52%), Gaps = 93/589 (15%)

Query: 43  SFLLHKFPLVTLSGKIRKMVAEAKGSNLSNL-ELLNFPGGYQTFELAMKFCYGMNFEITT 101
           SFLLHKFPLV+  G I+K+ +E+  SN SN+  + +FPGG + FEL +KFCY ++FEI T
Sbjct: 6   SFLLHKFPLVSKCGFIKKLASES--SNDSNIIRIPDFPGGAEGFELVIKFCYDISFEINT 63

Query: 102 FNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDE 161
            N+A L CAAEYLEMTEE+   NLV   + YLNE++ +SL KSV+VL   + L P + + 
Sbjct: 64  ENIAMLLCAAEYLEMTEEHSVENLVETIEVYLNEVILKSLSKSVKVLQKSQDLLP-IAER 122

Query: 162 IRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVI 221
           +R+   C+++IA   C+E  ++               E  V WW +DL+VL ID F+RV+
Sbjct: 123 VRLVDRCIDSIAYAICQESQSN---------------EDIVDWWADDLAVLKIDMFRRVL 167

Query: 222 SAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWN---------PSRTNSSPTNGEKDQR 272
            AM   G    ++   L  YAE +L+G+ +  F N                    E ++R
Sbjct: 168 VAMIARGFKRYSLGPVLKLYAEKALRGLVR--FLNFLTEQCDIFGKEAKKMEAEQEHEKR 225

Query: 273 TIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLL 332
            I+ET+VSL+P ++ +S+ ++FL  +L+ AI L  T++C+               +DDLL
Sbjct: 226 LILETIVSLLPRER-NSVSVSFLSILLRAAIYLETTVACRLDLEKRMGLQLRQAVIDDLL 284

Query: 333 IP--SLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMD 390
           IP  S    +++ DVDTV R+L+N+L+                V  N       +G+LM+
Sbjct: 285 IPYYSFNGDNTMLDVDTVQRILMNYLE--------------FEVEGNSADFASDIGELME 330

Query: 391 AYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKF 450
            YLAEIA D  ++  KFI   E +P  +R     +YRAIDI+LK H  ++E E KK+C  
Sbjct: 331 TYLAEIASDRNINFAKFIGFAECIPKQSR-----MYRAIDIFLKTHPNISEVEKKKVCSL 385

Query: 451 IDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSA 510
           +DC+KLS++   HAAQNDR             Q  L N+               +  P  
Sbjct: 386 MDCKKLSRDVYAHAAQNDRF------------QENLSNSDSPAPATAE-----KTLSPPE 428

Query: 511 AMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQGMIDKAGNG---------- 560
             S ++  + L REN+ LKLE+ +++++  ELEKE+ F      D + +           
Sbjct: 429 LSSYKNELSKLNRENQYLKLELLKVKMKFKELEKEKAFEVMSGSDCSSSVSTASVAKPRL 488

Query: 561 --RTFLTSISKGIGR-IAMFSSQGGGKRQKSVRKSREGKTGRSRRYSVS 606
             ++F+ S+S+ +G+ I  F  + G  +Q            +SRR+S+S
Sbjct: 489 PRKSFINSVSQKLGKLINPFGLKQGQTKQ-----------PKSRRHSIS 526


>AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18896353-18898374 REVERSE LENGTH=569
          Length = 569

 Score =  306 bits (784), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 204/589 (34%), Positives = 321/589 (54%), Gaps = 53/589 (8%)

Query: 31  VAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNL-SNLELLNFPGGYQTFELAM 89
           +  DI I VD  +F LHKFPL++ S K+ +++ E + S + S+++L NFPGG + FE+ +
Sbjct: 16  LPSDIEIEVDDITFHLHKFPLMSKSKKLHQLITEQEQSKVYSHIKLENFPGGSEIFEMVI 75

Query: 90  KFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLS 149
           K  YG   +I+      LRCAAEYLEMTEEY   NL+++T+ +L+E VF ++Q+S++ L 
Sbjct: 76  KISYGFKVDISVSTAVPLRCAAEYLEMTEEYSPENLISKTEKFLSEFVFTNVQESIKALK 135

Query: 150 TCEMLPPDMVDEIRISKGCVEAIAMNACKEQLAS---------GLSKLDCDGESKELKEG 200
            CE +   + + + I++ C+++I   A     +S         G+  +D   +SK+ K  
Sbjct: 136 ACESVS-SLAESLCITEQCIDSIVFQASSTDPSSFYGWPINNGGIFTVDRKKQSKDSK-- 192

Query: 201 CVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRT 260
               W EDL+ LS   F+RVI +M    +  + +  SL+ YA+  + GI +S   + S +
Sbjct: 193 -TELWFEDLTELSFPIFRRVILSMKSSVLSPEIVERSLLTYAKKHIPGISRSSSASSSSS 251

Query: 261 NSSPTNG-EKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXX 319
           +SS T   E  QR ++ET+ S +P   +++  L   FG+L+ AI+L A+ +C+       
Sbjct: 252 SSSTTIASENQQRELLETITSDLPLTATTTRSL---FGLLRAAIILNASENCRKFLEKKI 308

Query: 320 XXXXXMVSLDDLLIPSLQS-GDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNC 378
                  +LDDLLIPS     ++L+D+D V RLL  FL+ +                   
Sbjct: 309 GSNLEKATLDDLLIPSYSYLNETLYDIDLVERLLRRFLENVAVSS--------------- 353

Query: 379 HGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTT 438
             SL  VG+L+D  L EIA D  L   +F  L   LP  ARV DDGLYRA+DIY K H+ 
Sbjct: 354 -SSLTVVGRLIDGVLGEIASDANLKPEQFYNLAVLLPVQARVYDDGLYRAVDIYFKTHSW 412

Query: 439 LTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXX 498
           + E+E +K+C  +DC+KL+ E C HAAQN+RLP++ VVQVL++EQL+L+           
Sbjct: 413 ILEEEKEKICSVMDCRKLTVEGCTHAAQNERLPLRAVVQVLFLEQLQLRQVITGTLLTEE 472

Query: 499 XXQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQ--GMIDK 556
              +    +          +    +EN+ L+L++  +R R+++LEKE +++K+    IDK
Sbjct: 473 DGDKTVVDL--------GRWKEAVKENQVLRLDMDTMRTRVNQLEKECLYLKKVIAKIDK 524

Query: 557 AGNGRTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKT--GRSRRY 603
                  L     G G+ ++   + G K    V  S+E      RSRR+
Sbjct: 525 ES-----LLKAKHGAGKWSI-GKKFGCKFSAQVCDSQEATMVDRRSRRF 567


>AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:4380432-4382497 FORWARD LENGTH=591
          Length = 591

 Score =  301 bits (772), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 193/561 (34%), Positives = 300/561 (53%), Gaps = 52/561 (9%)

Query: 34  DITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAMKFCY 93
           D+ I V  ESF LHKFPL++ SG +  + ++A  +     +L + PGG +TF L  KFCY
Sbjct: 29  DVMIQVVDESFHLHKFPLLSRSGYLETLFSKASETTCV-AQLHDIPGGPETFLLVAKFCY 87

Query: 94  GMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLS-TCE 152
           G+  E+T  N   LRCAAEYL+M+E Y + NL+  T+++LN+ VF + + S++ L  +CE
Sbjct: 88  GVRIEVTPENAVSLRCAAEYLQMSENYGDANLIYLTESFLNDHVFVNWEDSIKALEKSCE 147

Query: 153 MLPPDMVDEIRISKGCVEAIAMNACKEQ----------LASGLSKLDCDGESKELKEGCV 202
                + +E+ I   C+ ++AM AC E           L  G +         + K    
Sbjct: 148 PKVLPLAEELHIVSRCIGSLAMKACAEDNTSFFNWPISLPEGTTTTTIYWNGIQTKATSE 207

Query: 203 AWWVEDLS-VLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTN 261
            WW  D+S  L +  ++R I  +   GV +  I +S+ HYA+ +L  +G       SR +
Sbjct: 208 NWWFNDVSSFLDLPMYKRFIKTVESRGVNAGIIAASVTHYAKRNLPLLG------CSRKS 261

Query: 262 SSPTN-----------GEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATIS 310
            SP+              ++QR+++E +V L+P  K  +    FL  +L+ +++L A+  
Sbjct: 262 GSPSEEGTNYGDDMYYSHEEQRSLLEEIVELLPGKKCVT-STKFLLRLLRTSMVLHASQV 320

Query: 311 CKXXXXXXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXX 369
            +              +L+DLLIP+++ SG++L+D D+V R+L +F+             
Sbjct: 321 TQETLEKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQRILDHFMLTFDSSIVEEKQM 380

Query: 370 XXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAI 429
                 S+   S+ KV  L+D YLAE+A D  L L KF AL   +P+  R +DDG+YRAI
Sbjct: 381 MG---DSHPLKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAI 437

Query: 430 DIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNA 489
           DIY+KAH  LTE E ++LC  ++CQKLS EAC HAAQN+RLP++++VQVL+ EQ+RL+ +
Sbjct: 438 DIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQMRLRTS 497

Query: 490 XXXXXXXXXXXQRISSGVPSAAMSPRDNYASLR-RENRELKLEISRLRVRLSELEKEQMF 548
                          +G    +    D   +L   +N    + +  +R R+ ELEKE M 
Sbjct: 498 I--------------AGWLFGSEENNDTSGALEGNKNTNANMVMHGMRERVFELEKECMS 543

Query: 549 MKQGM--IDKAGNGRTFLTSI 567
           MKQ +  + K   GR F + I
Sbjct: 544 MKQDLDKLVKTKEGRNFFSKI 564


>AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25730225 FORWARD
           LENGTH=746
          Length = 746

 Score =  300 bits (768), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 208/672 (30%), Positives = 323/672 (48%), Gaps = 121/672 (18%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           +  D+  D+ + +   +F LHK+PL++ SGK+ +++ E++  + + L L + PGG + FE
Sbjct: 48  VATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDPTILILDDLPGGPEAFE 107

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           LA KFCYG+  ++T  N++ LRCAAEYLEMTE+  E NL+ +T+ +L+ +V  S + S+ 
Sbjct: 108 LASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIL 167

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQ---------LASGLSKLDCDGESKEL 197
           VL +CE L P   + ++I + C E+IA  AC             A   S  +  G S   
Sbjct: 168 VLKSCEKLSP-WAENLQIVRRCSESIAWKACSNPKGIRWAYTGKAPSPSTTNFAGSSPRW 226

Query: 198 KEG------CVA------------WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLI 239
            E       C              WW ED+S+L ID F RVI+A+   G+  + + + ++
Sbjct: 227 NESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIM 286

Query: 240 HYAESSLKGIGKS--------------------------------------QFWNPSRT- 260
           HYA   L G+ K                                         W      
Sbjct: 287 HYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHM 346

Query: 261 --NSSPTNGEKD--------------QRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIM 304
             ++  TNG +D              QR IVE+L+S++P  K  S+  +FL  +L+ A M
Sbjct: 347 VLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQK-DSVTCSFLLRLLRAANM 405

Query: 305 LGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQS-GDSLFDVDTVHRLLVNFLQR----- 358
           L    +                +L DLLIP   + G++++DVD V RLL +FL +     
Sbjct: 406 LKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEG 465

Query: 359 -------------IXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLP 405
                        +               G N   + ++V +L+D+YL E+A D  L L 
Sbjct: 466 SSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLT 525

Query: 406 KFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAA 465
           KF  L EALP+ AR  DDGLYRAID YLKAH TL+E E K+LC+ +DCQKLS +AC HAA
Sbjct: 526 KFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAA 585

Query: 466 QNDRLPVQMVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSG------------VPSAAMS 513
           QN+RLP+++VVQVL+ EQ+++ NA              + G            + +   S
Sbjct: 586 QNERLPLRVVVQVLFSEQVKISNALANTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQS 645

Query: 514 PRDNYASLRRENRELKLEISRLRVRLSELEKE-----QMFMKQGMIDKAGNGRTFLTSIS 568
            ++ +A+ +++   LK E+  ++ +  EL+ E     + F K G +    +   + TS  
Sbjct: 646 FQEGWAAAKKDINTLKFELETVKTKYVELQNEMEVMQRQFEKTGKVKNTPSSSAW-TSGW 704

Query: 569 KGIGRIAMFSSQ 580
           K + ++   S Q
Sbjct: 705 KKLSKLTKMSGQ 716


>AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:16361864-16364411 REVERSE LENGTH=651
          Length = 651

 Score =  295 bits (754), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 182/568 (32%), Positives = 301/568 (52%), Gaps = 54/568 (9%)

Query: 31  VAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLE---LLNFPGGYQTFEL 87
           ++ DIT+VVD   F LHKFPLV+  GK+ +M  ++K ++  +L    L  FPGG   F +
Sbjct: 23  LSSDITVVVDDVKFHLHKFPLVSKCGKLARMYEDSKSTDKQSLWTTVLEEFPGGADNFLI 82

Query: 88  AMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQ-------S 140
             +FCYG   +IT+ N+  + CAAEYLEMT EY E NL+++ +T+L++ V +       +
Sbjct: 83  VARFCYGARVDITSKNLVSIHCAAEYLEMTNEYGEDNLISQVETFLHKHVLRNWKDCILA 142

Query: 141 LQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGL-----SKLDCDGES- 194
           LQ S  VL + E L   M+ ++      + A++   C +    G        L   G S 
Sbjct: 143 LQSSSPVLKSAEKL--QMIPKL------MNAVSTMVCTDPSLFGWPMMMYGTLQSPGGSI 194

Query: 195 --------KELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSL 246
                     ++     WW ED+S LS+D F+R+I  M   G+ ++++  ++++YA   L
Sbjct: 195 LWNGINTGARMRSSGSDWWYEDISYLSVDLFKRLIKTMETKGIRAESLAGAMMYYARKYL 254

Query: 247 KGIGKSQF--------------WNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPL 292
            G+G+ Q               +N ++ +S  +    DQ  ++ET++SL+P  +  S   
Sbjct: 255 PGLGRWQSGTSDSSKSRRRVVSFNLAKASSPSSMPPLDQIALLETILSLLPEKRGRSF-C 313

Query: 293 TFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLL 352
            FL G+L++A +LG   +C             + +LD+LLI +    ++L++VD V R++
Sbjct: 314 KFLLGLLRVAFILGVDGNCVKKLEKRIGMQLELATLDNLLILNYSDSETLYNVDCVERIV 373

Query: 353 VNFLQRIXXXXXXXXXXXXXX---VGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIA 409
            +F+  +                 V S     L KV  L+D+Y+AE+A D  L   K  +
Sbjct: 374 RHFVSSLSSSSSQLPEFSPPSLDPVTSPSPAPLKKVANLVDSYMAEVASDVNLKPDKMRS 433

Query: 410 LIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDR 469
           L  ALP+ +R + DGLYRA DIY K H  L++++ ++LC  +D Q+LS +AC HA+ NDR
Sbjct: 434 LAAALPESSRPLYDGLYRAFDIYFKEHPWLSDRDKEQLCNIMDYQRLSIDACAHASHNDR 493

Query: 470 LPVQMVVQVLYVEQLRLKNAXX----XXXXXXXXXQRISSGVPSAAMSPRDNYASLRREN 525
           LP+++V+QVL+ EQ+ L+ A                 I  G     +  RD + ++ R+N
Sbjct: 494 LPLRVVLQVLFFEQMHLRTALAGGLNVANTETAHAVTIPGGRTGQEIVQRDGWVTVVRQN 553

Query: 526 RELKLEISRLRVRLSELEKEQMFMKQGM 553
           + LK+++ ++R R+ ELE+E   +KQ M
Sbjct: 554 QVLKVDMQKMRSRVGELEEEFQSIKQEM 581


>AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family
           protein | chr2:6358864-6361300 FORWARD LENGTH=634
          Length = 634

 Score =  272 bits (696), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 163/478 (34%), Positives = 256/478 (53%), Gaps = 37/478 (7%)

Query: 30  DVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAM 89
           ++A DI++ V+G  F LHKFPL++    ++K+++    +N+ ++++   PGG   FE   
Sbjct: 26  ELASDISVDVEGSRFCLHKFPLLSKCACLQKLLSSTDKNNIDDIDISGIPGGPTAFETCA 85

Query: 90  KFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLS 149
           KFCYGM   ++ +NV   RCAAEYL M E   + NL+ + D +L+  +F+S + S+ VL 
Sbjct: 86  KFCYGMTVTLSAYNVVATRCAAEYLGMHETVEKGNLIYKIDVFLSSSLFRSWKDSIIVLQ 145

Query: 150 TCEMLPPDMVDEIRISKGCVEAIAMNAC-------------KEQLASGLSKLDCDGESKE 196
           T +   P + +++++   C++AIA  AC             K++LA   +  D    S +
Sbjct: 146 TTKPFLP-LSEDLKLVSLCIDAIATKACVDVSHVEWSYTYNKKKLAEENNGAD----SIK 200

Query: 197 LKEGCVAWWVEDLSVLSIDFFQRVISAMG-RMGVGSDNIISSLIHYAESSLKGIGKSQFW 255
            ++    WWVEDL  L ID+++RVI  +  +  +G + I  +L  Y    L G  K    
Sbjct: 201 ARDVPHDWWVEDLCELEIDYYKRVIMNIKTKCILGGEVIGEALKAYGYRRLSGFNKGVME 260

Query: 256 NPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXX 315
                           +TI+ETLV L+P +K+S +   FL  +LK   M+ +    K   
Sbjct: 261 QGDLVK---------HKTIIETLVWLLPAEKNS-VSCGFLLKLLKAVTMVNSGEVVKEQL 310

Query: 316 XXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXX-------- 367
                      S+ +LLI S Q  ++L+DVD V ++++ F++R                 
Sbjct: 311 VRRIGQQLEEASMAELLIKSHQGSETLYDVDLVQKIVMEFMRRDKNSEIEVQDDEDGFEV 370

Query: 368 XXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYR 427
                  G     S L V +++D+YL EIA DP L   KFI + E++    R   D LYR
Sbjct: 371 QEVRKLPGILSEASKLMVAKVIDSYLTEIAKDPNLPASKFIDVAESVTSIPRPAHDALYR 430

Query: 428 AIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLR 485
           AID++LK H  +T+ E K++CK +DC+KLS EAC HA QNDRLP+++VVQVL+ EQ+R
Sbjct: 431 AIDMFLKEHPGITKGEKKRMCKLMDCRKLSVEACMHAVQNDRLPLRVVVQVLFFEQVR 488


>AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive
           NPH3 family protein | chr4:15390788-15393627 REVERSE
           LENGTH=571
          Length = 571

 Score =  264 bits (675), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/493 (33%), Positives = 260/493 (52%), Gaps = 47/493 (9%)

Query: 14  PATPNFSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNL 73
           P T      F     +D+  D+TI V   +F LHKFPL++ S +++++V EA       +
Sbjct: 10  PDTFESDGKFVKYAVSDLDSDVTIHVGEVTFHLHKFPLLSKSNRMQRLVFEASEEKTDEI 69

Query: 74  ELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYL 133
            +L+ PGGY+ FE+  KFCYGM   +  +N+  +RCAAEYLEMTE+    NL+ + + +L
Sbjct: 70  TILDMPGGYKAFEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRGNLIYKIEVFL 129

Query: 134 NEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCV-----------EAIAMNACKEQLA 182
           N  +F+S + S+ VL T   L P   +++++   C+           E I  +    +  
Sbjct: 130 NSGIFRSWKDSIIVLQTTRSLLP-WSEDLKLVGRCIDSVSAKILVNPETITWSYTFNRKL 188

Query: 183 SGLSKL-DCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHY 241
           SG  K+ +   E +E       WWVED+  L ID F+RVIS +   G  ++ +I+  + Y
Sbjct: 189 SGPDKIVEYHREKREENVIPKDWWVEDVCELEIDMFKRVISVVKSSGRMNNGVIAEALRY 248

Query: 242 AESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMP--TDKSSSIPLTFLFGML 299
             +          W P  +  S T+     + +VET+V L+P      S    +FL  +L
Sbjct: 249 YVAR---------WLP-ESMESLTSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLL 298

Query: 300 KMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFL--- 356
           K++I++GA  + +              S+ DLLI          +V+ VHR++  F+   
Sbjct: 299 KVSILVGADETVREDLVENVSLKLHEASVKDLLI---------HEVELVHRIVDQFMADE 349

Query: 357 QRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPD 416
           +R+                   +G LL VG+L+DAYL   A +  L+L  F+ L E +P+
Sbjct: 350 KRVSEDDRYKEFVLG-------NGILLSVGRLIDAYL---ALNSELTLSSFVELSELVPE 399

Query: 417 YARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVV 476
            AR I DGLY+AID ++K H  LT+ E K+LC  +D +KL+ EA  HAAQN+RLP+++VV
Sbjct: 400 SARPIHDGLYKAIDTFMKEHPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVV 459

Query: 477 QVLYVEQLRLKNA 489
           QVLY EQLR  ++
Sbjct: 460 QVLYFEQLRANHS 472


>AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  249 bits (635), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/497 (33%), Positives = 257/497 (51%), Gaps = 39/497 (7%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           + ++V+ D TI V G  +LLHKFPL++   ++++M +E   S  S ++L  FPGG + FE
Sbjct: 22  VSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSE---SPESIIQLPEFPGGVEAFE 78

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           L  KFCYG+   I+ +N+   RCAAEYL+M+EE  + NLV + + + N  +    + S+ 
Sbjct: 79  LCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVYKLEVFFNSCILNGWRDSIV 138

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSK------LDCDGESKELKEG 200
            L T +  P    +++ I+  C+EAIA           LS        D D  S      
Sbjct: 139 TLQTTKAFPL-WSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRVRDDDMSSNRAAAS 197

Query: 201 CVAWWVEDLSVLSIDFFQRVISAMGRMG-VGSDNIISSLIHYAESSLKGIGKSQFWNPSR 259
              WW ED++ L ID + R + A+   G V +  I  +L  YA   L  + +++     +
Sbjct: 198 SRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLIGDALRVYASKWLPTLQRNRKVVKKK 257

Query: 260 ---TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXX 316
               + S T+     R ++E+++SL+P +K  ++  +FL  +LK A +L A+ S K    
Sbjct: 258 EDSDSDSDTDTSSKHRLLLESIISLLPAEK-GAVSCSFLLKLLKAANILNASTSSKMELA 316

Query: 317 XXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFLQR---------IXXXXXXX 366
                     ++ DLLIP +    + L+DVD V  +L  F+ +         +       
Sbjct: 317 RRVALQLEEATVSDLLIPPMSYKSELLYDVDIVATILEQFMVQGQTSPPTSPLRGKKGMM 376

Query: 367 XXXXXXXVGSNCHGSL--------------LKVGQLMDAYLAEIAPDPCLSLPKFIALIE 412
                     N                   LKV +L+D YL +IA D  L L KF+ L E
Sbjct: 377 DRRRRSRSAENIDLEFQESRRSSSASHSSKLKVAKLVDGYLQQIARDVNLPLSKFVTLAE 436

Query: 413 ALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPV 472
           ++P+++R+  D LYRAIDIYLKAH  L + E K++C+ +DC+KLS EAC HAAQN+ LP+
Sbjct: 437 SVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERKRVCRVLDCKKLSMEACMHAAQNEMLPL 496

Query: 473 QMVVQVLYVEQLRLKNA 489
           ++VVQVL+ EQ R   A
Sbjct: 497 RVVVQVLFYEQARAAAA 513


>AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  249 bits (635), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/497 (33%), Positives = 257/497 (51%), Gaps = 39/497 (7%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           + ++V+ D TI V G  +LLHKFPL++   ++++M +E   S  S ++L  FPGG + FE
Sbjct: 22  VSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSE---SPESIIQLPEFPGGVEAFE 78

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           L  KFCYG+   I+ +N+   RCAAEYL+M+EE  + NLV + + + N  +    + S+ 
Sbjct: 79  LCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVYKLEVFFNSCILNGWRDSIV 138

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSK------LDCDGESKELKEG 200
            L T +  P    +++ I+  C+EAIA           LS        D D  S      
Sbjct: 139 TLQTTKAFPL-WSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRVRDDDMSSNRAAAS 197

Query: 201 CVAWWVEDLSVLSIDFFQRVISAMGRMG-VGSDNIISSLIHYAESSLKGIGKSQFWNPSR 259
              WW ED++ L ID + R + A+   G V +  I  +L  YA   L  + +++     +
Sbjct: 198 SRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLIGDALRVYASKWLPTLQRNRKVVKKK 257

Query: 260 ---TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXX 316
               + S T+     R ++E+++SL+P +K  ++  +FL  +LK A +L A+ S K    
Sbjct: 258 EDSDSDSDTDTSSKHRLLLESIISLLPAEK-GAVSCSFLLKLLKAANILNASTSSKMELA 316

Query: 317 XXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFLQR---------IXXXXXXX 366
                     ++ DLLIP +    + L+DVD V  +L  F+ +         +       
Sbjct: 317 RRVALQLEEATVSDLLIPPMSYKSELLYDVDIVATILEQFMVQGQTSPPTSPLRGKKGMM 376

Query: 367 XXXXXXXVGSNCHGSL--------------LKVGQLMDAYLAEIAPDPCLSLPKFIALIE 412
                     N                   LKV +L+D YL +IA D  L L KF+ L E
Sbjct: 377 DRRRRSRSAENIDLEFQESRRSSSASHSSKLKVAKLVDGYLQQIARDVNLPLSKFVTLAE 436

Query: 413 ALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPV 472
           ++P+++R+  D LYRAIDIYLKAH  L + E K++C+ +DC+KLS EAC HAAQN+ LP+
Sbjct: 437 SVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERKRVCRVLDCKKLSMEACMHAAQNEMLPL 496

Query: 473 QMVVQVLYVEQLRLKNA 489
           ++VVQVL+ EQ R   A
Sbjct: 497 RVVVQVLFYEQARAAAA 513


>AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  249 bits (635), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/497 (33%), Positives = 257/497 (51%), Gaps = 39/497 (7%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           + ++V+ D TI V G  +LLHKFPL++   ++++M +E   S  S ++L  FPGG + FE
Sbjct: 22  VSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSE---SPESIIQLPEFPGGVEAFE 78

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           L  KFCYG+   I+ +N+   RCAAEYL+M+EE  + NLV + + + N  +    + S+ 
Sbjct: 79  LCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVYKLEVFFNSCILNGWRDSIV 138

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSK------LDCDGESKELKEG 200
            L T +  P    +++ I+  C+EAIA           LS        D D  S      
Sbjct: 139 TLQTTKAFPL-WSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRVRDDDMSSNRAAAS 197

Query: 201 CVAWWVEDLSVLSIDFFQRVISAMGRMG-VGSDNIISSLIHYAESSLKGIGKSQFWNPSR 259
              WW ED++ L ID + R + A+   G V +  I  +L  YA   L  + +++     +
Sbjct: 198 SRGWWAEDIAELGIDLYWRTMIAIKSGGKVPASLIGDALRVYASKWLPTLQRNRKVVKKK 257

Query: 260 ---TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXX 316
               + S T+     R ++E+++SL+P +K  ++  +FL  +LK A +L A+ S K    
Sbjct: 258 EDSDSDSDTDTSSKHRLLLESIISLLPAEK-GAVSCSFLLKLLKAANILNASTSSKMELA 316

Query: 317 XXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFLQR---------IXXXXXXX 366
                     ++ DLLIP +    + L+DVD V  +L  F+ +         +       
Sbjct: 317 RRVALQLEEATVSDLLIPPMSYKSELLYDVDIVATILEQFMVQGQTSPPTSPLRGKKGMM 376

Query: 367 XXXXXXXVGSNCHGSL--------------LKVGQLMDAYLAEIAPDPCLSLPKFIALIE 412
                     N                   LKV +L+D YL +IA D  L L KF+ L E
Sbjct: 377 DRRRRSRSAENIDLEFQESRRSSSASHSSKLKVAKLVDGYLQQIARDVNLPLSKFVTLAE 436

Query: 413 ALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPV 472
           ++P+++R+  D LYRAIDIYLKAH  L + E K++C+ +DC+KLS EAC HAAQN+ LP+
Sbjct: 437 SVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERKRVCRVLDCKKLSMEACMHAAQNEMLPL 496

Query: 473 QMVVQVLYVEQLRLKNA 489
           ++VVQVL+ EQ R   A
Sbjct: 497 RVVVQVLFYEQARAAAA 513


>AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family
           protein | chr5:3217028-3219368 REVERSE LENGTH=607
          Length = 607

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/554 (30%), Positives = 282/554 (50%), Gaps = 63/554 (11%)

Query: 19  FSNSFTTR-----IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKM-VAEAKGSNLSN 72
            +NSF  +     + + +  D++I V+  +F  HKFPL++  G I  + +  +   N  +
Sbjct: 33  LANSFEKKDRSWYVKSQIPTDLSIQVNDITFKAHKFPLISKCGYISSIELKPSTSENGYH 92

Query: 73  LELLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTY 132
           L+L NFPGG  TFE  +KFCY +  ++   NVA LRCA+EYL MTEE+   NL+++T+ +
Sbjct: 93  LKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEYLYMTEEFEAGNLISKTEAF 152

Query: 133 LNEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDG 192
           +  +V  S + ++ VL +C  L P   + ++I + C + +A  AC +         +   
Sbjct: 153 ITFVVLASWRDTLTVLRSCTNLSP-WAENLQIVRRCCDLLAWKACNDN--------NIPE 203

Query: 193 ESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLK----- 247
           +  +  E C+     D++ L ID F RVI+ M             ++ YA++ L      
Sbjct: 204 DVVDRNERCL---YNDIATLDIDHFMRVITTMKARRAKPQITGKIIMKYADNFLPVINDD 260

Query: 248 -------GIGKSQFW---NPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFG 297
                  G+GK++     N  R   S + G ++ +  +E+LVS++P  +S ++   FL  
Sbjct: 261 LEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLVSVLPP-QSGAVSCHFLLR 319

Query: 298 MLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQ 357
           MLK +I+  A+ +                ++ DLLIP+ ++ +    V      L++  Q
Sbjct: 320 MLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEEQQERVRIFEFFLMHEQQ 379

Query: 358 RIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDY 417
           ++                         + +L+D YLAEIA DP L + KF  L E LP+ 
Sbjct: 380 QVLGKPS--------------------ISKLLDNYLAEIAKDPYLPITKFQVLAEMLPEN 419

Query: 418 ARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLP----VQ 473
           A    DGLYRAID++LK H +L++ + ++LCK ++C+KLS +AC HAAQNDRLP    VQ
Sbjct: 420 AWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPLRTIVQ 479

Query: 474 MVVQVLYVEQLRLKNAXXXXXXXXXXXQRISSGVPSAAMSPRDN--YASLRRENRELKLE 531
           +  QVL+ EQ++++             +  S G     MS RDN    +L+ E   +K +
Sbjct: 480 INTQVLFSEQVKMR--MMMQDKLPEKEEENSGGREDKRMS-RDNEIIKTLKEELENVKKK 536

Query: 532 ISRLRVRLSELEKE 545
           +S L+   +EL++E
Sbjct: 537 MSELQSDYNELQQE 550


>AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family
           protein | chr2:9810785-9812468 FORWARD LENGTH=481
          Length = 481

 Score =  245 bits (625), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 241/453 (53%), Gaps = 53/453 (11%)

Query: 44  FLLHKFPLVTLSGKIRKMVA-----EAKGSNLSNLELLNFPGGYQTFELAMKFCYGMNFE 98
           F LHKFPL++ SG ++K +A     E K + +  +++   PGG   FE+ +KFCYG+   
Sbjct: 40  FYLHKFPLLSKSGFLQKHIATSKNEEEKKNQIDEIDISEIPGGSVAFEICVKFCYGITVT 99

Query: 99  ITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDM 158
           +  +NV  +RCAAE+LEM E + + NLV + D +LN  +F+S + S+ VL T + L  D 
Sbjct: 100 LNAYNVVAVRCAAEFLEMNETFEKSNLVYKIDVFLNSTIFRSWKDSIIVLQTTKDLLSD- 158

Query: 159 VDEIRISKGCVEAIA----MNACKEQLASGLSKLDCDGESKELKEGCVA-WWVEDLSVLS 213
            D   + K C+ +IA    ++  K + +   ++     + ++ ++G    WWVEDL  L 
Sbjct: 159 -DSEELVKRCLGSIASTASIDTSKVKWSYTYNRKKKLEKVRKPEDGVPKDWWVEDLCELH 217

Query: 214 IDFFQRVISAMGRMGVGSDNIISSLIH-YAESSLKGIGKSQFWNPSRTNSSPTNGEKDQR 272
           ID +++ I A+   G    N+I   +H YA   + G  K                +   R
Sbjct: 218 IDLYKQAIKAIKNRGKVPSNVIGEALHAYAIRRIAGFSKESM-------------QLIDR 264

Query: 273 TIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLL 332
           +++ T++ L+P D+  +I  +FL  + + +I LG   + K              +++D+L
Sbjct: 265 SLINTIIELLP-DEKGNISSSFLTKLHRASIFLGCEETVKEKLKKRVSEQLEETTVNDIL 323

Query: 333 IPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAY 392
                    ++D+D V  L+  F+ R                    H S + V +L+D Y
Sbjct: 324 ---------MYDLDMVQSLVKEFMNR----------------DPKTH-SKVSVAKLIDGY 357

Query: 393 LAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFID 452
           LAE + DP L L  F++L E L  + R   D LYRAID++LK H+ +++ E K++C  +D
Sbjct: 358 LAEKSRDPNLPLQNFLSLAETLSSFPRHSHDVLYRAIDMFLKEHSGISKSEKKRVCGLMD 417

Query: 453 CQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLR 485
           C+KLS EAC HA QN+RLP++++VQVL+ EQ+R
Sbjct: 418 CRKLSAEACEHAVQNERLPMRVIVQVLFFEQIR 450


>AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:9704142-9706161 FORWARD LENGTH=588
          Length = 588

 Score =  243 bits (621), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/504 (32%), Positives = 254/504 (50%), Gaps = 63/504 (12%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVA--EAKGSNLSN-LELLNFPGGYQ 83
           + +D+  D+ I V    +LLHKFP+++   +++ +V+  E + S     ++L++FPG  +
Sbjct: 22  VSSDLLNDLVIQVKSTKYLLHKFPMLSKCLRLKNLVSSQETETSQEQQVIQLVDFPGETE 81

Query: 84  TFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEY---RERNLVTRTDTYLNEIVFQS 140
            FEL  KFCYG+   +   NV  +RCAAEYL MTEE       NLV R + +L   VF+S
Sbjct: 82  AFELCAKFCYGITITLCAHNVVAVRCAAEYLGMTEEVELGETENLVQRLELFLTTCVFKS 141

Query: 141 LQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNAC-------KEQLASGL-------- 185
            + S   L T ++LP    +++ I+  C+EAIA             QL +GL        
Sbjct: 142 WRDSYVTLQTTKVLPL-WSEDLGITNRCIEAIANGVTVSPGEDFSTQLETGLLRNRSRIR 200

Query: 186 -SKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAM--GRMGVGSDNIISSLIHYA 242
             ++ C+G      E  + WW EDL+ L +D ++R + A+      +    I ++L  YA
Sbjct: 201 RDEILCNGGGGSKAES-LRWWGEDLAELGLDLYRRTMVAIKSSHRKISPRLIGNALRIYA 259

Query: 243 ESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMA 302
                       W PS   SS      D   ++E+++SL+P +K SS+P +FL  +LKMA
Sbjct: 260 SK----------WLPSIQESSA-----DSNLVLESVISLLPEEK-SSVPCSFLLQLLKMA 303

Query: 303 IMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXX 362
            ++  + S K              ++ +LLIP       L+DVD V  ++  FL  I   
Sbjct: 304 NVMNVSHSSKMELAIKAGNQLDKATVSELLIPLSDKSGMLYDVDVVKMMVKQFLSHISPE 363

Query: 363 XXXXXXXXXXXVGSNCHGSLL---------------------KVGQLMDAYLAEIAPDPC 401
                         +     L                     KV +L+D+YL EIA D  
Sbjct: 364 IRPTRTRTEHRRSRSEENINLEEIQEVRGSLSTSSSPPPLLSKVAKLVDSYLQEIARDVN 423

Query: 402 LSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEAC 461
           L++ KF+ L E +PD +R+  D LY AID+YL+ H  + + E K+LC+ +DC+KLS EA 
Sbjct: 424 LTVSKFVELAETIPDTSRICHDDLYNAIDVYLQVHKKIEKCERKRLCRILDCKKLSVEAS 483

Query: 462 NHAAQNDRLPVQMVVQVLYVEQLR 485
             AAQN+ LP++++VQ+L+VEQ R
Sbjct: 484 KKAAQNELLPLRVIVQILFVEQAR 507


>AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914906 REVERSE LENGTH=579
          Length = 579

 Score =  239 bits (610), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/468 (33%), Positives = 249/468 (53%), Gaps = 23/468 (4%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSN---LELLNFPGGYQ 83
           +  ++A D+ ++V    F LHKFPL++ S +++K++A       S+   + + + PGG  
Sbjct: 23  VATELATDVVVIVGDVKFHLHKFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGGPP 82

Query: 84  TFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQK 143
            FE+  KFCYGM   +  +NV  +RCAAEYLEM E     NLV + + +LN  V +S + 
Sbjct: 83  AFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSWKD 142

Query: 144 SVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGE--SKELKEGC 201
           S+ VL T     P   +++++   C+E+IA+ A  +      S      +    E+    
Sbjct: 143 SIIVLQTTRSFYP-WSEDVKLDVRCLESIALKAAMDPARVDWSYTYNRRKLLPPEMNNNS 201

Query: 202 VA--WWVEDLSVLSIDFFQRVISAMGRMG-VGSDNIISSLIHYAESSLKGIGKSQFWNPS 258
           V   WWVEDL+ LSID F+RV+S + R G V  + I  +L  YA   + G      +   
Sbjct: 202 VPRDWWVEDLAELSIDLFKRVVSTIRRKGGVLPEVIGEALEVYAAKRIPG------FMIQ 255

Query: 259 RTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXX 318
             ++       +QR+++ETLVS++P++K S +   FL  +LK ++        +      
Sbjct: 256 NDDNDDEEDVMEQRSLLETLVSMLPSEKQS-VSCGFLIKLLKSSVSFECGEEERKELSRR 314

Query: 319 XXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNC 378
                   ++ DLLI + + G++++D+D V  L+  F+ +                    
Sbjct: 315 IGEKLEEANVGDLLIRAPEGGETVYDIDIVETLIDEFVTQTEKRDELDCSDDIN------ 368

Query: 379 HGSLLKVGQLMDAYLAEIAP-DPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHT 437
             S   V +L+D YLAEI+  +  LS  KFI + E +  + R   DG+YRAID++LK H 
Sbjct: 369 DSSKANVAKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAIDMFLKQHP 428

Query: 438 TLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLR 485
            +T+ E K   K +DC+KLS EAC HA QN+RLP+++VVQ+L+ EQ+R
Sbjct: 429 GITKSEKKSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVR 476


>AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family
           protein | chr4:17663080-17665299 REVERSE LENGTH=580
          Length = 580

 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 249/484 (51%), Gaps = 60/484 (12%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLE------------ 74
           + +++A D+ +++    F LHKFPL++ S +++K++  +  S  SN E            
Sbjct: 23  VSSELATDVIVIIGDVKFYLHKFPLLSKSARLQKLITTSTSS--SNEENQIHHHHHEDEI 80

Query: 75  -LLNFPGGYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYL 133
            +   PGG  +FE+  KFCYGM   +  +NV   RCAAE+LEM E   + NLV + + +L
Sbjct: 81  EIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMYETVEKGNLVYKIEVFL 140

Query: 134 NEIVFQSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIA----MNACKEQLASGLS-KL 188
           N  + QS + S+ VL T   L P   +E++++  C+++IA    ++  K + +   S K 
Sbjct: 141 NSSILQSWKDSIIVLQTTRALSP-YSEELKLTGRCLDSIASRASIDTSKVEWSYTYSKKK 199

Query: 189 DCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIH-YAESSLK 247
           + D   ++ +     WWVEDL  L ID ++R ++ +   G  S ++I   +H YA   + 
Sbjct: 200 NLDNGLRKPQAVPRDWWVEDLCDLHIDLYKRALATIEARGNVSADVIGEALHAYAIKRIP 259

Query: 248 GIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGA 307
           G  KS        +S         R + ++++ L+P D+  S+  +FL  +L+ +I LG 
Sbjct: 260 GFSKS--------SSVQVTDFAKYRALADSIIELIP-DEKRSVSSSFLTKLLRASIFLG- 309

Query: 308 TISCKXXXXXXXXXXXXM--VSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXX 365
              C             +   +L D+L         L+DV+ +  L+  FL+        
Sbjct: 310 ---CDEVAGLKNRVGERLDEANLGDVL---------LYDVELMQSLVEVFLKSRDPREDD 357

Query: 366 XXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDP-CLSLPKFIALIEALPDYARVIDDG 424
                              V +L+D YLAE + D   L L KF++L E +  + R   DG
Sbjct: 358 VTAKAS-------------VAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQSHDG 404

Query: 425 LYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQL 484
           +YRAID++LK H  + + E K++C+ +DC+KLS EAC HA QN+RLP+++VVQVL+ EQ+
Sbjct: 405 VYRAIDMFLKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQV 464

Query: 485 RLKN 488
           R  N
Sbjct: 465 RANN 468


>AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914646 REVERSE LENGTH=542
          Length = 542

 Score =  226 bits (575), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/449 (33%), Positives = 238/449 (53%), Gaps = 23/449 (5%)

Query: 46  LHKFPLVTLSGKIRKMVAEAKGSNLSN---LELLNFPGGYQTFELAMKFCYGMNFEITTF 102
           L +FPL++ S +++K++A       S+   + + + PGG   FE+  KFCYGM   +  +
Sbjct: 5   LKQFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGGPPAFEICAKFCYGMAVTLNAY 64

Query: 103 NVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVDEI 162
           NV  +RCAAEYLEM E     NLV + + +LN  V +S + S+ VL T     P   +++
Sbjct: 65  NVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSWKDSIIVLQTTRSFYP-WSEDV 123

Query: 163 RISKGCVEAIAMNACKEQLASGLSKLDCDGE--SKELKEGCVA--WWVEDLSVLSIDFFQ 218
           ++   C+E+IA+ A  +      S      +    E+    V   WWVEDL+ LSID F+
Sbjct: 124 KLDVRCLESIALKAAMDPARVDWSYTYNRRKLLPPEMNNNSVPRDWWVEDLAELSIDLFK 183

Query: 219 RVISAMGRMG-VGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVET 277
           RV+S + R G V  + I  +L  YA   + G      +     ++       +QR+++ET
Sbjct: 184 RVVSTIRRKGGVLPEVIGEALEVYAAKRIPG------FMIQNDDNDDEEDVMEQRSLLET 237

Query: 278 LVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQ 337
           LVS++P++K S +   FL  +LK ++        +              ++ DLLI + +
Sbjct: 238 LVSMLPSEKQS-VSCGFLIKLLKSSVSFECGEEERKELSRRIGEKLEEANVGDLLIRAPE 296

Query: 338 SGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIA 397
            G++++D+D V  L+  F+ +                      S   V +L+D YLAEI+
Sbjct: 297 GGETVYDIDIVETLIDEFVTQTEKRDELDCSDDIN------DSSKANVAKLIDGYLAEIS 350

Query: 398 P-DPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKL 456
             +  LS  KFI + E +  + R   DG+YRAID++LK H  +T+ E K   K +DC+KL
Sbjct: 351 RIETNLSTTKFITIAEKVSTFPRQSHDGVYRAIDMFLKQHPGITKSEKKSSSKLMDCRKL 410

Query: 457 SQEACNHAAQNDRLPVQMVVQVLYVEQLR 485
           S EAC HA QN+RLP+++VVQ+L+ EQ+R
Sbjct: 411 SPEACAHAVQNERLPLRVVVQILFFEQVR 439


>AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25729510 FORWARD
           LENGTH=558
          Length = 558

 Score =  216 bits (551), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/511 (30%), Positives = 238/511 (46%), Gaps = 103/511 (20%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           +  D+  D+ + +   +F LHK+PL++ SGK+ +++ E++  + + L L + PGG + FE
Sbjct: 48  VATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDPTILILDDLPGGPEAFE 107

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           LA KFCYG+  ++T  N++ LRCAAEYLEMTE+  E NL+ +T+ +L+ +V  S + S+ 
Sbjct: 108 LASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIL 167

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQ---------LASGLSKLDCDGESKEL 197
           VL +CE L P   + ++I + C E+IA  AC             A   S  +  G S   
Sbjct: 168 VLKSCEKLSP-WAENLQIVRRCSESIAWKACSNPKGIRWAYTGKAPSPSTTNFAGSSPRW 226

Query: 198 KEG------CVA------------WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLI 239
            E       C              WW ED+S+L ID F RVI+A+   G+  + + + ++
Sbjct: 227 NESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIM 286

Query: 240 HYAESSLKGIGKS--------------------------------------QFWNPSRT- 260
           HYA   L G+ K                                         W      
Sbjct: 287 HYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHM 346

Query: 261 --NSSPTNGEKD--------------QRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIM 304
             ++  TNG +D              QR IVE+L+S++P  K  S+  +FL  +L+ A M
Sbjct: 347 VLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIPPQK-DSVTCSFLLRLLRAANM 405

Query: 305 LGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQS-GDSLFDVDTVHRLLVNFLQR----- 358
           L    +                +L DLLIP   + G++++DVD V RLL +FL +     
Sbjct: 406 LKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEG 465

Query: 359 -------------IXXXXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLP 405
                        +               G N   + ++V +L+D+YL E+A D  L L 
Sbjct: 466 SSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLT 525

Query: 406 KFIALIEALPDYARVIDDGLYRAIDIYLKAH 436
           KF  L EALP+ AR  DDGLYRAID YLK +
Sbjct: 526 KFQVLAEALPESARTCDDGLYRAIDSYLKVY 556


>AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19354171-19356126 FORWARD LENGTH=559
          Length = 559

 Score =  208 bits (530), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 235/465 (50%), Gaps = 20/465 (4%)

Query: 27  IFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFE 86
           +  D   D+ I ++  ++ LH+  LV   G +R++  + + S+   +EL + PGG   FE
Sbjct: 22  LITDTPNDLVIRINNTTYHLHRSCLVPKCGLLRRLCTDLEESDTVTIELNDIPGGADAFE 81

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           L  KFCY +   ++  N+    CA+++L M++   + NL+ + + + +  + Q  + S+ 
Sbjct: 82  LCAKFCYDITINLSAHNLVNALCASKFLRMSDSVDKGNLLPKLEAFFHSCILQGWKDSIV 141

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCD------GESKELKEG 200
            L +   LP +  + + I + C+++I      E++ +  S++         G +K     
Sbjct: 142 TLQSTTKLP-EWCENLGIVRKCIDSIV-----EKILTPTSEVSWSHTYTRPGYAKRQHHS 195

Query: 201 CVA-WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSR 259
               WW ED+S L +D F+ VI+A          +I   +H          KS   +   
Sbjct: 196 VPRDWWTEDISDLDLDLFRCVITAARSTFTLPPQLIGEALHVYTCRWLPYFKSNSHSGFS 255

Query: 260 TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXX 319
              +    E+ +R +V T+V+++P DK S +   FL  ++ +A  + A+++ K       
Sbjct: 256 VKENEAALERHRR-LVNTVVNMIPADKGS-VSEGFLLRLVSIASYVRASLTTKTELIRKS 313

Query: 320 XXXXXMVSLDDLLIPSLQSGD-SLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNC 378
                  +L+DLL+PS  S     +D D V  +L +FL                   +  
Sbjct: 314 SLQLEEATLEDLLLPSHSSSHLHRYDTDLVATVLESFLMLWRRQSSAHLSSN----NTQL 369

Query: 379 HGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTT 438
             S+ KV +L+D+YL  +A D  + + KF++L EA+PD AR   D LY+AI+I+LK H  
Sbjct: 370 LHSIRKVAKLIDSYLQAVAQDVHMPVSKFVSLSEAVPDIARQSHDRLYKAINIFLKVHPE 429

Query: 439 LTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQ 483
           ++++E K+LC+ +DCQKLS +   HA +N+R+P++ VVQ L+ +Q
Sbjct: 430 ISKEEKKRLCRSLDCQKLSAQVRAHAVKNERMPLRTVVQALFFDQ 474


>AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:19656009-19657546 FORWARD LENGTH=454
          Length = 454

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 199/394 (50%), Gaps = 34/394 (8%)

Query: 205 WVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSP 264
           W +D  +L ID+F + I+ +   GV  D I S ++HYA   L  +      +  +     
Sbjct: 28  WFDDGCILGIDYFVKTIAGIKSKGVRPDLIGSIIVHYASQWLPDLSDIVLNSDDQQPQPQ 87

Query: 265 TNGEK--------DQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXX 316
              E          +R+ VETL+ ++P ++ S +P  FL  +L+ A M+GA  + K    
Sbjct: 88  QQSESFSVTAFVMKKRSFVETLIGIIPPERDS-VPCDFLLRLLRTANMVGADANYKAELE 146

Query: 317 XXXXXXXXMVSLDDLLIPSL-QSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVG 375
                     SL +L+IPS   +  +L DV+ + RL+  F                   G
Sbjct: 147 ARISWQLDQASLKELMIPSFSHTCGTLLDVELMTRLVKKF-------------AGLDNEG 193

Query: 376 SNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKA 435
                SL+KV +L+D+YLAE A D  L+L +FI+L+EALP++ARV +DGLYRAID YLKA
Sbjct: 194 VKSGASLIKVAKLVDSYLAEAALDGDLTLSEFISLVEALPNHARVTEDGLYRAIDTYLKA 253

Query: 436 HTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXXXXX 495
           H  +T+QE K+LC  ID  KLS EA  HAAQNDRLPV+ ++QVL+ EQ +L +       
Sbjct: 254 HPNVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRTIIQVLFSEQAKLSHRSHNNIE 313

Query: 496 XXXXXQRISSGVPSAAMSPRDNYA-------SLRRENRELKLEISRLRVRLSELEKEQMF 548
                    SGV S+      +Y+       + +RE    + EI RLR  +++L+ E   
Sbjct: 314 WSGSS---FSGVRSSPNPSGSHYSDSGPARCTSKREINVQQAEIRRLREDMAKLKCECEA 370

Query: 549 MKQGMIDKAGNGRTFLTSISKGIGRIAMFSSQGG 582
           M Q  + K    +   TS +KG  R      + G
Sbjct: 371 M-QTQLHKLVEKKGTCTSGNKGFFRWKKLGFRSG 403


>AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19516291-19518450 FORWARD LENGTH=625
          Length = 625

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 225/484 (46%), Gaps = 74/484 (15%)

Query: 31  VAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLEL-LNFPGGYQTFELAM 89
           +   + + V  +SF LHK  L   SG  ++     +   LS +E+   FPGG +TFE  M
Sbjct: 39  LPASVHVRVCNKSFNLHKSLLCAKSGYFKE-----REDQLSEIEIPQEFPGGAETFEKIM 93

Query: 90  KFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLS 149
            F YG    I  FN+A LRCAA++LEMTE++   NL  R D YLN++V Q+   ++ VL 
Sbjct: 94  LFIYGCPTLIHPFNIAGLRCAAQFLEMTEQHSTGNLCERFDLYLNQVVLQNWDDTLVVLK 153

Query: 150 TCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELK-----EGCV-- 202
            C+ L P   D + +S+ C+E++A  AC E L         D E +  K     EG V  
Sbjct: 154 KCQDLVPWSEDLLIVSR-CIESLAFTACMEIL---------DPERRREKPVIMLEGMVNQ 203

Query: 203 AW-------------WVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGI 249
            W             W++DL+ L  +FF+++I ++ R G+    +   +  YA  S+   
Sbjct: 204 PWEYTNIERIINQDTWIKDLTDLPFEFFKKIIGSLRRQGMKERYVSPLVALYASKSVIPE 263

Query: 250 GKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSS-IPLTFLFGMLKMAIMLGAT 308
           G+             TN +  QR     L  L+  DK+   +P+ F F  L   +     
Sbjct: 264 GQ-------------TNTDILQR----ALDLLLTRDKAYRFVPVGFYFACLAHNL----- 301

Query: 309 ISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSL-FDVDTVHRLLVNFLQRIXXXXXXXX 367
                           ++ L D ++  L +     F         V F Q +        
Sbjct: 302 ------------KHDTVLKLQDQIVSLLHTAQPENFIYPKAGNRQVAFSQELLTMESLFS 349

Query: 368 XXXXXXVGSN--CHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGL 425
                    +     S ++VG+L D +L+ +  D  +   +FI LIE +P   R   D L
Sbjct: 350 VYVSTESERHLTSSSSNVRVGKLWDIFLSRLPYDQEMKTTRFIELIETVPMSFRESHDQL 409

Query: 426 YRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLR 485
           Y A++ +L+ HT ++++E   +C +++CQKLSQEA     +N+++P+++VVQ L+++QL 
Sbjct: 410 YLAVNAFLQVHTNISQEEKGSICSYLNCQKLSQEASLELVKNEKMPLRLVVQALFIQQLN 469

Query: 486 LKNA 489
              A
Sbjct: 470 THQA 473


>AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:5270267-5271700 REVERSE LENGTH=452
          Length = 452

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 158/295 (53%), Gaps = 27/295 (9%)

Query: 205 WVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSP 264
           + ++  +  +++F + I+ +   G+  D I S + HYA   L  +  +     S T+   
Sbjct: 29  YFDESCIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSGNVSAIISSTSLES 88

Query: 265 TNGEKD------------QRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCK 312
            N   D            +R  VETL+ ++P +K S +P  FL  +L+ A M+GA  +  
Sbjct: 89  KNNHNDTQPESVTASVMKKRFFVETLIGILPPEKDS-VPCNFLLRLLRTAKMVGANPNYL 147

Query: 313 XXXXXXXXXXXXMVSLDDLLIPSLQ-SGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXX 371
                         SL +L+IPS   +  +L D++ V RL+  F                
Sbjct: 148 TELETRVSWQLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKF-------------SGL 194

Query: 372 XXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAIDI 431
              G     +L+KV +L+D+YLAE A D  L+LP+FI+LI ALP +AR  +DGLYRAID 
Sbjct: 195 DSEGVKTAAALVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSHARTTEDGLYRAIDT 254

Query: 432 YLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRL 486
           YLKAH  + +QE K+LC+ ID +KLS EA  HAAQNDRLPV+ ++ VL+ EQ +L
Sbjct: 255 YLKAHPQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLFTEQTKL 309


>AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:6898383-6901157 REVERSE LENGTH=554
          Length = 554

 Score =  169 bits (429), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 239/493 (48%), Gaps = 76/493 (15%)

Query: 34  DITIVVDGE-SFLLHKFPLVTLSGKIRKMVAEAKGSNLSN------LELLNFPGGYQTFE 86
           D+ I ++ + +F +++  +   SG +RKM+ ++     ++      +E+ +FPGG   F+
Sbjct: 6   DLQINLNNQFTFFVNQDLISEYSGFLRKMIKQSNKKKKNHKNSRIIIEVEDFPGGSDGFD 65

Query: 87  LAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVE 146
           L ++FCYG    I   NV+ L C++ +LEMTE+    NL+ RT+ +L  + + S    V 
Sbjct: 66  LVLRFCYGGGISIDVSNVSILHCSSVFLEMTEKLCSSNLLLRTEKFLEGMFYWSWNDIVL 125

Query: 147 VLSTCE--MLPPD---MVDEIRISKGCVEAIAMNACKEQL-------------------A 182
            L +CE   L  D   +VD++    G +  I  N+    +                    
Sbjct: 126 CLKSCEQVFLHADSYGLVDKLVF--GVLAKIPQNSDVSHVFSSSSPSSSASASASSQSPE 183

Query: 183 SGLSKLDCDGESKELKEGCVA---WWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISS-- 237
           + + +   D  S      C     WW +D+S+L     +++I+ +G     +D+++ +  
Sbjct: 184 TAMIRSYSDKRSTSRSFSCRTSNEWWFDDMSILGPKIIEKLINTLGAHDKNNDSLVLTKF 243

Query: 238 LIHYAESSLKGIGKSQFWNPSR-TNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLF 296
           L+HY ++ +          P++ TN    +G  D  T V+ +V    T    +     +F
Sbjct: 244 LLHYLKTKV----------PNKSTNKLEYSGLAD--TAVQGVVFAAKT----AFSCRKMF 287

Query: 297 GMLKMAIMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDS-LFDVDTVHRLLVNF 355
            +L++      +   +              +LDDLLIP+   G+  ++DVD V RLL  F
Sbjct: 288 WVLRVLSGFSISKESRIGLERVIGEMLDQATLDDLLIPAGGKGEKGVYDVDLVIRLLKVF 347

Query: 356 LQRIXXXXXXXXXXXXXXVGSNCHGS----LLKVGQLMDAYLAEIAPDPCLSLPKFIALI 411
           ++                +G+   G     + ++G+L+D YL EI+PD  L + KF+ + 
Sbjct: 348 VR----------------IGNTEEGDQNLRMRRIGKLIDKYLREISPDQNLKVSKFLEVA 391

Query: 412 EALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLP 471
           E+LPD AR   DGLYRAI+IYL++H  L+ ++  KLC+ ++ +KL+ + C   A+N ++P
Sbjct: 392 ESLPDSARDWFDGLYRAINIYLESHPKLSSEDRTKLCRCLNYKKLTLDTCKQLAKNPKIP 451

Query: 472 VQMVVQVLYVEQL 484
             + VQ L  +QL
Sbjct: 452 PNIAVQALKSQQL 464


>AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:7789814-7792179 FORWARD LENGTH=506
          Length = 506

 Score =  162 bits (410), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 221/460 (48%), Gaps = 65/460 (14%)

Query: 32  AGDITIVVDGE-SFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELL--NFPGGYQTFELA 88
             D+ + ++GE +  L+K  +   SG +RK++ ++  S+  NL+++  +FPGG ++FE  
Sbjct: 5   CSDLEVDINGEQTIFLNKQIICAYSGTLRKLLGKSTSSS-GNLKVIFNDFPGGAESFEFV 63

Query: 89  MKFCYG-MNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVF--------- 138
            +FCY      +   NV  L CAA+++E+T+      ++ +T+  + EI +         
Sbjct: 64  SRFCYNDGRVAVMPSNVVFLHCAAKFMEVTK------VLEQTEKCMEEIRYWAWPEVLLC 117

Query: 139 ----QSLQKSVEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGES 194
               Q ++ S EV S    L   +V+++ ++     + A +AC     S L +  CD +S
Sbjct: 118 LKQCQEVETSPEVDSLAAKLMDALVEKLCLTIEMSPSSAGSACSPD--SSLFRFSCDSKS 175

Query: 195 KELKEGC---VAWWVEDLSVLSIDFFQRVISAMGRMGVGSDN-IISSLIHYAESSLKGIG 250
            E  + C   + WW +++ VLS    +  +  M       DN IIS  + Y +       
Sbjct: 176 TESFKNCSVRLTWWFDEVLVLSSGLVEMFLKLMVLRKF--DNLIISRFLFYYQ------- 226

Query: 251 KSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATIS 310
           K +F + S           ++R I+ET++  +     S +P   LF +L++A+ L    S
Sbjct: 227 KVKFCSAS---------SHEKRKILETIIDTLCVLDRSCVPCKSLFAVLRLALGLNINKS 277

Query: 311 CKXXXXXXXXXXXXMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXX 370
           C               +LD+LL+PS      L+ V+ V R    FL              
Sbjct: 278 CMNKLEVMIGHQLDQATLDNLLVPSPSKSSHLYYVNLVLRFTKAFLD------------- 324

Query: 371 XXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVIDDGLYRAID 430
               G+     L KV  L+D Y+AE+APDPCL   KF++LI  +PD AR   + +YRAID
Sbjct: 325 ----GARSGLQLKKVSSLIDQYIAEVAPDPCLKPSKFLSLITLVPDSARESHEDIYRAID 380

Query: 431 IYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRL 470
           +YL+AHT  T+ E   L + +  +KLS E+  H ++N + 
Sbjct: 381 MYLEAHTGTTDGEKLNLIRTLSYEKLSGESRAHISRNQKF 420


>AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:18623857-18626292 REVERSE LENGTH=525
          Length = 525

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 232/478 (48%), Gaps = 53/478 (11%)

Query: 33  GDITIVVDGE-SFLLHKFPLVTLSGKIRKMVAEAKGS-----NLSNLELLNFPGGYQTFE 86
            D+ I ++G+ +F L++  +   SG +RKM+ ++K        +  +E+ +FPGG   FE
Sbjct: 5   NDLKINLNGQYTFFLNQNVISKYSGSLRKMIKQSKKKRNKKKRIITIEINDFPGGPDGFE 64

Query: 87  LAMKFCYGMNFEI--TTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKS 144
           L  +FCY  N EI     NV+ L C + +L M+E++   NL  +T+ +L E+ + S    
Sbjct: 65  LVSRFCYH-NGEILIDVSNVSTLYCCSVFLGMSEKFCFSNLFLQTEKFLEEVFYGSWSDI 123

Query: 145 VEVLSTCEML-----PPDMVDEIRISKGCVEAIAMNACKE--------------QLASGL 185
           V  L  CE +        +VD++  +   +  I+ N+                 ++A   
Sbjct: 124 VSCLKNCEQVFFQADSYGLVDKLIFA--ALNKISQNSDDFSSSSLSSFASSLSPEMAKNT 181

Query: 186 SKLDCDGESKELKEG-CVAWWVEDLSVLSIDFFQRVISAMG--RMGVGSDNIISSLIHYA 242
           S+ D    S+ +  G    WW ED++ LS     +++  +G  +  + S  +   L+HY 
Sbjct: 182 SESDGRYISRSVACGRSNEWWFEDMTNLSPKIILKLVMIIGAYKTNIKSLVLTRFLLHYL 241

Query: 243 ESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMA 302
           ++ L+          SRT +     + +   + +T V  + +  + +     LF +L++ 
Sbjct: 242 KTKLQ--------TKSRTTTELMRNKLEYSDLADTAVRGVISAGTRTFSCRKLFWILRVL 293

Query: 303 IMLGATISCKXXXXXXXXXXXXMVSLDDLLIPSLQSGDS-LFDVDTVHRLLVNFLQRIXX 361
                +   +              +LDDLLI +  S +S  ++VD V RLL  F++    
Sbjct: 294 SSFSLSRESRIGLETLIGEMLEQATLDDLLISARGSRESGFYNVDLVIRLLKVFVKNREE 353

Query: 362 XXXXXXXXXXXXVGSNCHGSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVI 421
                              ++ ++G+L+D YL EI+PD  L +PKF+ + E+LPD AR  
Sbjct: 354 EEEESRER-----------NMKEIGKLIDKYLREISPDQNLKVPKFLGVAESLPDSARDC 402

Query: 422 DDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVL 479
            DG+YRAIDIYL++H  LT Q+  ++C+ ++ +KL+ E C   A+N ++P ++ ++ L
Sbjct: 403 FDGVYRAIDIYLQSHPNLTPQDRTEICRCLNYKKLTMETCKQLARNPKIPPEIAIEAL 460


>AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:836340-837707 FORWARD LENGTH=455
          Length = 455

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 194/408 (47%), Gaps = 55/408 (13%)

Query: 85  FELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKS 144
           F L  +FCYG   E++  N+  + C A YLEM++++   NL+ +  T+L + V  S  ++
Sbjct: 8   FHLVTRFCYGYKIELSADNIVSVLCIAYYLEMSDDHSSNNLLNKAVTFLEQRVLMSWSET 67

Query: 145 VEVLSTCEMLPPDMVDEIRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELKEGCVAW 204
           V+ L  C     D + +   + G +E          L S + K   D             
Sbjct: 68  VKALCIC----SDKILDKLANVGLIEVF--------LDSLIEKALNDTR----------- 104

Query: 205 WVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNSSP 264
            ++DL  L +  ++ +I  + +  V  +N+++S+ +YA            W   + +S  
Sbjct: 105 LLQDLITLPLRLYEPLILEVSKHNVSLENLVASVCNYANR----------WVFEK-DSGD 153

Query: 265 TNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXXXX 324
            +  +++R  +E +  L+P  +  +I   FLF  LK +I LGA   C+            
Sbjct: 154 GSVSRNKREGIEAVERLLPHQR-GTISSGFLFKSLKESIFLGACSDCRKGFEVRISNQLD 212

Query: 325 MVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCHGSLLK 384
           M    DL I S  + D  +D++ +  +L +F                           + 
Sbjct: 213 MARAKDLQILS-PTEDGSYDIELLKTILKSFYSNDSVPDL---------------SRFVS 256

Query: 385 VGQLMDAYLAEIAP-DPCLSLPKFIALIE-ALPDYARVI--DDGLYRAIDIYLKAHTTLT 440
           V ++++ +L E A  D  L +  F  L E A+     V+   DG+YRAID+YL+ H  L 
Sbjct: 257 VARMLEEFLLEAAASDAGLRVGTFKELAEIAVAASCDVLSYSDGIYRAIDVYLERHRDLI 316

Query: 441 EQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKN 488
           E E  + C+F+ C+KLS EAC HA++N++LP+++V+QVL+V Q+++++
Sbjct: 317 ESEKMEACRFLHCKKLSPEACEHASKNEKLPLRIVMQVLFVSQMQIRD 364


>AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:5795302-5797031 FORWARD LENGTH=548
          Length = 548

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 209/472 (44%), Gaps = 41/472 (8%)

Query: 29  ADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELA 88
           A    D+ I V G  F L K  L   S K+  ++   +   L  L L +     +TFEL 
Sbjct: 3   ASYVSDLHINVKGVPFHLCKEMLAKRSSKVSSLLERNEIDEL-RLILRDLEVDPETFELV 61

Query: 89  MKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVL 148
            +FC G  F+ T+  +  + C A YL M EE    NL+ +   +L   VF S  +++  L
Sbjct: 62  ARFCNGSEFKFTSDTIVSVLCIAYYLGMNEEQSSNNLLGKASEFLEHRVFPSWSETINAL 121

Query: 149 STCEMLPPDMVDEIRISKGCVEAIAMNACKE-----QLASGLSKLDCDGESKELKEGCVA 203
            + +    D + ++ +     +++   A  +     +L    ++ D    +   +   + 
Sbjct: 122 RSGDK-SFDKLADVGLVDVFFDSLIEKASYDPRLLGELIKNRAETDDYRPNPRRRLFVID 180

Query: 204 WWVEDLSVLSIDFFQR-VISAMGRMGVGSDNIISSLIHYAESSLKGIGKSQFWNPSRTNS 262
           W  EDL  + +  ++  +I A+    +  + I+ S+  YA+  +    +S          
Sbjct: 181 WKSEDLITIPLRLYEPFMIRAIKSRSIPVEYIVLSVCKYAKKWVFDTEES---------- 230

Query: 263 SPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKXXXXXXXXXX 322
              +G+K  R  +E +  L+P  +   I    LF  LK +I L A+  C+          
Sbjct: 231 --LSGQK--REAIEVVERLLPYQRGL-ISCELLFESLKHSIWLEASSECQNGFMIRICKQ 285

Query: 323 XXMVSLDDLLIPSLQSGDS---LFDVDTVHRLLVNFLQRIXXXXXXXXXXXXXXVGSNCH 379
             M    DL I S   G+      +++ V  ++ +F                    S   
Sbjct: 286 LDMAKSTDLKILSRGYGEKAEGFENIELVKTVVKSFYTYYANE------------DSETV 333

Query: 380 GSLLKVGQLMDAYLAEIAPDPCLSLPKFIALIEALPDYARVI---DDGLYRAIDIYLKAH 436
              +KV +L + +L   A +  L L  F+ L E     ++ I    DG+YRAID++L++H
Sbjct: 334 SHFVKVAKLSEEFLFLAASEASLKLEAFVELAEMTVAVSQGILSYSDGIYRAIDVFLESH 393

Query: 437 TTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKN 488
             LTE E  ++CK ++C KLSQE    AA+N +LP+++VV VL V QL++++
Sbjct: 394 RYLTESEKMEVCKVLECGKLSQEGFERAAKNQKLPLRIVVNVLCVSQLQIRD 445


>AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=517
          Length = 517

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 27/238 (11%)

Query: 385 VGQLMDAYLAEIAPDPCLSLPKFIALIEALP--DYARVID---------DGLYRAIDIYL 433
           +G+ ++A L EI    C++  +F+     LP  D+  V D         D LYR +D Y+
Sbjct: 198 IGRCVEA-LMEIGDGDCVN--EFLEEAVKLPAGDFNVVADAVQQRFPRHDLLYRIVDAYV 254

Query: 434 KAHT-TLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNAXXX 492
           K H   +TE+E  ++C  IDC KLS     HA QN ++P++ +V+ +  EQL  +++   
Sbjct: 255 KEHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVRAMLQEQLNTRHSIMV 314

Query: 493 XXXXXXXXQRISSGVPSAAMSPRDNYASL---------RRENRELKLEISRLRVRLSELE 543
                             A   RD+  +L          R+N  L+  ++    R+  LE
Sbjct: 315 AAVAASCAAPTGVRHREIATEARDSSVTLGSLLQRDTAARQNCRLRAAMNSTSSRIESLE 374

Query: 544 KEQMFMKQGM---IDKAGNGRTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKTG 598
           KE   MK+ +    +K  + R  + S S+ +   A  +S     +  +V K++ G  G
Sbjct: 375 KELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQPSNVNKTQRGDRG 432



 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 15/146 (10%)

Query: 34  DITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAMKFCY 93
           D+ + V G  F LHK PL + SG +++ +       LS    LN     +TF L   FCY
Sbjct: 68  DVFVNVGGTRFHLHKDPL-SKSGYLKRHLTGVNELTLS--PPLNITA--ETFSLVAGFCY 122

Query: 94  GMNFEITTFNVARLRCAAEYLEMTE-----EYRE--RNLVTRTDTYLNEIVFQSLQKSVE 146
           G + E+T  NV  LR A E L +TE       R+  RNL   T++YL  +VF ++     
Sbjct: 123 GAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNL---TESYLRRVVFVNVDYIQI 179

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAI 172
           VL +C +L P+      +   CVEA+
Sbjct: 180 VLRSCLLLLPESETTAFLIGRCVEAL 205


>AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=520
          Length = 520

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 15/146 (10%)

Query: 34  DITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPGGYQTFELAMKFCY 93
           D+ + V G  F LHK PL + SG +++ +       LS    LN     +TF L   FCY
Sbjct: 68  DVFVNVGGTRFHLHKDPL-SKSGYLKRHLTGVNELTLS--PPLNITA--ETFSLVAGFCY 122

Query: 94  GMNFEITTFNVARLRCAAEYLEMTE-----EYRE--RNLVTRTDTYLNEIVFQSLQKSVE 146
           G + E+T  NV  LR A E L +TE       R+  RNL   T++YL  +VF ++     
Sbjct: 123 GAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNL---TESYLRRVVFVNVDYIQI 179

Query: 147 VLSTCEMLPPDMVDEIRISKGCVEAI 172
           VL +C +L P+      +   CVEA+
Sbjct: 180 VLRSCLLLLPESETTAFLIGRCVEAL 205



 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 30/241 (12%)

Query: 385 VGQLMDAYLAEIAPDPCLSLPKFIALIEALP--DYARVID---------DGLYRAIDIYL 433
           +G+ ++A L EI    C++  +F+     LP  D+  V D         D LYR +D Y+
Sbjct: 198 IGRCVEA-LMEIGDGDCVN--EFLEEAVKLPAGDFNVVADAVQQRFPRHDLLYRIVDAYV 254

Query: 434 KAHTT----LTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLYVEQLRLKNA 489
           K        +TE+E  ++C  IDC KLS     HA QN ++P++ +V+ +  EQL  +++
Sbjct: 255 KVKREHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVRAMLQEQLNTRHS 314

Query: 490 XXXXXXXXXXXQRISSGVPSAAMSPRDNYASL---------RRENRELKLEISRLRVRLS 540
                                A   RD+  +L          R+N  L+  ++    R+ 
Sbjct: 315 IMVAAVAASCAAPTGVRHREIATEARDSSVTLGSLLQRDTAARQNCRLRAAMNSTSSRIE 374

Query: 541 ELEKEQMFMKQGM---IDKAGNGRTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKT 597
            LEKE   MK+ +    +K  + R  + S S+ +   A  +S     +  +V K++ G  
Sbjct: 375 SLEKELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQPSNVNKTQRGDR 434

Query: 598 G 598
           G
Sbjct: 435 G 435