Miyakogusa Predicted Gene

Lj1g3v2482420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2482420.1 Non Chatacterized Hit- tr|C5YZS8|C5YZS8_SORBI
Putative uncharacterized protein Sb09g023470
OS=Sorghu,31.14,2e-17,seg,NULL,CUFF.29058.1
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51580.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   149   4e-36
AT3G51580.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   144   1e-34

>AT3G51580.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 25 plant structures; EXPRESSED
           DURING: 15 growth stages; Has 1768 Blast hits to 1607
           proteins in 294 species: Archae - 2; Bacteria - 552;
           Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38;
           Other Eukaryotes - 253 (source: NCBI BLink). |
           chr3:19131167-19133016 REVERSE LENGTH=390
          Length = 390

 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 132/230 (57%), Gaps = 16/230 (6%)

Query: 163 GLSQSSTNDTCEG-LNFCTDEGDMTACISITD--PKYLVVLLQNRGDGTIKVQLRSDFES 219
           G S+S++ DTC G  N C  E  + AC    D      ++L+QN G+ ++K ++     +
Sbjct: 165 GSSESASVDTCVGKSNICRTENSLVACTLSIDKGAANWLILVQNEGETSLKAKIVLPVNA 224

Query: 220 NLGGVEVDKHKTEKVNITRXXXXXXXXXXNAGKGDCVLHMATHVPEGSFVLRLPSYDKIL 279
            L  + + KH+++KVNI+           + GKG C LHM     E +     PSY+K++
Sbjct: 225 -LQELTLPKHQSQKVNIS-ISGDTNKIILDTGKGQCALHMYPSE-ESTLPFHFPSYEKLV 281

Query: 280 TPVNGAYFLIFTVLVFGGIWACCMFRKKRP--DEIPYQELEMA----LPVSASATNVESA 333
           TP+NGAYFLI +V++FGGIWA C+ RK R     +PY+ELE++    L   +   +VE+A
Sbjct: 282 TPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVHDVETA 341

Query: 334 EXXXXXXXXXXXXNVAVKSPGAVR---GISANGLTSRSANKDGWDNNWDE 380
           +            N AVKSPG+      ISANGLT+R+ N+DGWD++WD+
Sbjct: 342 DWDEGWDDDWDENN-AVKSPGSAAKSVSISANGLTARAPNRDGWDHDWDD 390


>AT3G51580.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages. | chr3:19131167-19133016
           REVERSE LENGTH=410
          Length = 410

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 133/250 (53%), Gaps = 36/250 (14%)

Query: 163 GLSQSSTNDTCEG-LNFCTDEGDMTACISITDPKY----------------------LVV 199
           G S+S++ DTC G  N C  E  + AC    D  Y                       ++
Sbjct: 165 GSSESASVDTCVGKSNICRTENSLVACTLSIDKGYETFLDIIVIPQQFARSLLCAANWLI 224

Query: 200 LLQNRGDGTIKVQLRSDFESNLGGVEVDKHKTEKVNITRXXXXXXXXXXNAGKGDCVLHM 259
           L+QN G+ ++K ++     + L  + + KH+++KVNI+           + GKG C LHM
Sbjct: 225 LVQNEGETSLKAKIVLPVNA-LQELTLPKHQSQKVNIS-ISGDTNKIILDTGKGQCALHM 282

Query: 260 ATHVPEGSFVLRLPSYDKILTPVNGAYFLIFTVLVFGGIWACCMFRKKRP--DEIPYQEL 317
                E +     PSY+K++TP+NGAYFLI +V++FGGIWA C+ RK R     +PY+EL
Sbjct: 283 YPS-EESTLPFHFPSYEKLVTPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGVPYREL 341

Query: 318 EMA----LPVSASATNVESAEXXXXXXXXXXXXNVAVKSPGAVR---GISANGLTSRSAN 370
           E++    L   +   +VE+A+            N AVKSPG+      ISANGLT+R+ N
Sbjct: 342 ELSGGPGLENESGVHDVETADWDEGWDDDWDENN-AVKSPGSAAKSVSISANGLTARAPN 400

Query: 371 KDGWDNNWDE 380
           +DGWD++WD+
Sbjct: 401 RDGWDHDWDD 410