Miyakogusa Predicted Gene
- Lj1g3v2431850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2431850.1 Non Chatacterized Hit- tr|D8T5D2|D8T5D2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,26.36,2e-18,FAMILY NOT NAMED,NULL; PPR_2,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; seg,NULL; PPR: ,CUFF.29016.1
(502 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 149 6e-36
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 148 8e-36
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 142 6e-34
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 138 9e-33
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 1e-30
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 124 2e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 122 4e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 4e-28
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 8e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 117 1e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 114 1e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 114 2e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 7e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 111 1e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 107 2e-23
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 106 4e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 103 3e-22
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 101 1e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 3e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 93 4e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 2e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 82 7e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 82 1e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 80 2e-15
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 80 2e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 79 8e-15
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 78 1e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 71 1e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 69 8e-12
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 1e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 68 2e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 68 2e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 64 2e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 64 3e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 3e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 9e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 58 2e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 56 7e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 56 7e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 53 4e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 5e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 51 2e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 49 8e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 49 1e-05
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/466 (43%), Positives = 296/466 (63%), Gaps = 13/466 (2%)
Query: 1 MVRHPLSKTANKYLRKFRKWPHSPYKTSWHHNFGEQQAMNILIKQAATIETCXXXXXXXX 60
M R + ++RK+RK PHS +KT W+ N ++ AM L T
Sbjct: 1 MARSSSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLT------------ 48
Query: 61 XXXXXPFLLSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETP 120
++ TL+ SF+ ++C+PTP AY F+IKTL +S L++I VL HLE EKF+TP
Sbjct: 49 -DSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTP 107
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E IF +I YG + RI++A+++FF+IP FRC P+ +VP+IL
Sbjct: 108 ESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEIL 167
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+K+ M +R+EESTF +LI ALCRI VD A +++ M +D +D ++ S ++SS+C+
Sbjct: 168 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
D + + + D+RK F PG+ D+T ++RFLV+ RG + + +LNQMK D ++PD+V
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
CYTIVL G++A+ DY K D+LFDE+L+LGL PDVYTYNVYINGLCKQN ++ A++++ SM
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
KLG +PNVVT N L+ AL +AGDLS+AK + KEM GV N HT+ IM+ + E+
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
A LLEE + +SS + +I +C+KGL+++A+EL+ +V
Sbjct: 408 VCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI C+ + A K M D + IIS C+ D+ A L + +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL--FHE 411
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G P + FT++I K DA + N M Q G P+VV YT ++ G+ EGD
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+EL EM +GL P+++TYN +NGLCK ++EA+++V G + VT T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ A C++G++ KA+ ++KEM KG++ + T+ ++++G + + LL ML K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++TF++++ C + + A + K + ++ P + +E L+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +++ CR +D K++ M G + I II LC + AE +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE--AFS 340
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G P + +T +I K A +M I PDV+ YT ++SG G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D V+ +LF EM GL PD T+ ING CK + +A ++ + MI+ GC PNVVT
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ LC+ GDL A ++ EM G++ N+ TY +++GL I EA L+ E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ ++ C+ G +++A E++K+++ K P + L+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ C+ + A ++ N MI+ G + + +I LC++ D+ SA L+
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--H 480
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K+G P + + ++ L K +A+ ++ + + G+ D V YT ++ G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ K E+ EML GL P + T+NV +NG C +++ ++++ M+ G PN T N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C +L A + K+M +GV + TY ++ G + EA L +EM K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
F ST+ +I ++ EA E+ ++ + A
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F V L + A ++ M+ G L C++ ++ L ++ +A A++V+ +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTATAIIVFRE 236
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
++G C V + +I F+ + R +A ++L M+ G PDV+ Y+ V++G G+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
K+ +L + M GL P+ Y Y I LC+ K+ EA + MI+ G P+ V T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ GD+ A EM + + ++ TY ++ G ++ EA L EM K
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P S TF +I C+ G + +A + ++ +P + L+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI LC+ +D A ++L+ M + G + + I++ LC+ ++ A LV G
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV--G 515
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G + +T ++ K A IL +M G++P +V + ++++G G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++L + ML G+ P+ T+N + C +N + A I M G P+ T
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C+A ++ +A + +EM KG +++ TY +++ G + + + EA + ++M ++
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 434 CFYPRSSTFD 443
FD
Sbjct: 696 GLAADKEIFD 705
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VL++ C ++ K+LN M+ G + + ++ C +N++ +A A ++
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA--IYK 620
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM G P + ++++ K +A ++ +MK G V Y++++ G +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++ E+FD+M GL D ++ + + K + D + +D +I+
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 114/295 (38%), Gaps = 3/295 (1%)
Query: 118 ETPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVP 177
E F LI Y A ++DA + + + C+P V
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS-AN 476
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L + + ++ T+ +++ LC+ ++ AVK++ G D + ++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ ++ A+ ++ +M G P ++ F ++ D +LN M GI P
Sbjct: 537 CKSGEMDKAQEIL--KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ + ++ + ++ +M G+ PD TY + G CK + EA +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
M G +V T + L+ + +A+ V +M +G+ + + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI C+ + A K M D + IIS C+ D+ A L + +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL--FHE 411
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G P + FT++I K DA + N M Q G P+VV YT ++ G+ EGD
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+EL EM +GL P+++TYN +NGLCK ++EA+++V G + VT T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ A C++G++ KA+ ++KEM KG++ + T+ ++++G + + LL ML K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++TF++++ C + + A + K + ++ P + +E L+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +++ CR +D K++ M G + I II LC + AE +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE--AFS 340
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G P + +T +I K A +M I PDV+ YT ++SG G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D V+ +LF EM GL PD T+ ING CK + +A ++ + MI+ GC PNVVT
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ LC+ GDL A ++ EM G++ N+ TY +++GL I EA L+ E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ ++ C+ G +++A E++K+++ K P + L+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ C+ + A ++ N MI+ G + + +I LC++ D+ SA L+
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL--H 480
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K+G P + + ++ L K +A+ ++ + + G+ D V YT ++ G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ K E+ EML GL P + T+NV +NG C +++ ++++ M+ G PN T N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C +L A + K+M +GV + TY ++ G + EA L +EM K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
F ST+ +I ++ EA E+ ++ + A
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F V L + A ++ M+ G L C++ ++ L ++ +A A++V+ +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTATAIIVFRE 236
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
++G C V + +I F+ + R +A ++L M+ G PDV+ Y+ V++G G+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
K+ +L + M GL P+ Y Y I LC+ K+ EA + MI+ G P+ V T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ GD+ A EM + + ++ TY ++ G ++ EA L EM K
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P S TF +I C+ G + +A + ++ +P + L+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI LC+ +D A ++L+ M + G + + I++ LC+ ++ A LV G
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV--G 515
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G + +T ++ K A IL +M G++P +V + ++++G G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++L + ML G+ P+ T+N + C +N + A I M G P+ T
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C+A ++ +A + +EM KG +++ TY +++ G + + + EA + ++M ++
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 434 CFYPRSSTFD 443
FD
Sbjct: 696 GLAADKEIFD 705
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VL++ C ++ K+LN M+ G + + ++ C +N++ +A A ++
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA--IYK 620
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM G P + ++++ K +A ++ +MK G V Y++++ G +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++ E+FD+M GL D ++ + + K + D + +D +I+
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 114/295 (38%), Gaps = 3/295 (1%)
Query: 118 ETPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVP 177
E F LI Y A ++DA + + + C+P V
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS-AN 476
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L + + ++ T+ +++ LC+ ++ AVK++ G D + ++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ ++ A+ ++ +M G P ++ F ++ D +LN M GI P
Sbjct: 537 CKSGEMDKAQEIL--KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ + ++ + ++ +M G+ PD TY + G CK + EA +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
M G +V T + L+ + +A+ V +M +G+ + + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 42/395 (10%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFR-IPR 149
+I++ N+ + +L + R+E E F+ + R YG A AVDLF R +
Sbjct: 83 MIESYANSGDFDSVEKLLSRI-RLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDE 141
Query: 150 FRCTPTVXXXXXXXXXXXXX---XXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIR 206
FRC +V ++ + +M I +F ++I ALC++R
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201
Query: 207 RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD 266
VD A+++ M E DG ++ LC
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC---------------------------- 233
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
KEER +A+ +L++M+ +G P V Y +++ G+ +GD ++ +L D M
Sbjct: 234 ---------KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
+ G +P+ TYN I+GLC + K+D+A+ +++ M+ C PN VT TL+ L + +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
A ++ M +G LN H Y +++ GL + + EA L +M +K P + ++
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+C++G NEA E++ +++A P A + +L+
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 185/426 (43%), Gaps = 54/426 (12%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
L+D +S C P+P Y LI L L + ++D++ ++ E + LI
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM-FLKGCVPNEVTYNTLIHGL 302
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
L ++ AV L R+ +C P V ++L + +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV-RLLSSMEERGYHLN 361
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIE--------------DGFGLDGK------ICS 231
+ + VLIS L + + + A+ + M E DG +GK I +
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 232 LIISSLCEQNDVTSA-------------EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEE 278
+I+S C N T + EA+ VW +M K G ++ +I L
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 279 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL---GLIPDVY 335
R +A+ + ++M GIKPD V Y+ ++ G+ G +L+ EML PDV
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE-AGDLSKAKGVMKE 394
TYN+ ++GLC Q + A+ +++SM+ GC P+V+TCNT L L E + K + ++E
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 454
+ ++ L+ + + A ++E ML K P++ST+ I+ +C+
Sbjct: 602 LVVR---------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
Query: 455 INEALE 460
IN A++
Sbjct: 647 INAAID 652
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
++ TF L++ LC+ V +A++I++ M+++G+ D + +IS LC+ +V EA+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV--KEAVE 351
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
V M P + + +I L KE + +A + + GI PDV + ++ G+
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
++ ELF+EM G PD +TYN+ I+ LC + K+DEA+ ++ M GC +V+
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T NTL+ C+A +A+ + EM + GV N TY ++DGL + +A+ L+++M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + P T+++++ C+ G I +A ++++ + + P + L+
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 180/392 (45%), Gaps = 20/392 (5%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYG---LADRIQD 139
P P Y ++ L + D+ +L+ + + + E F+ LI Y L D I
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDM-KSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 140 AVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMK-----IRIEEST 194
VD + I F P L++ H K I+ + ST
Sbjct: 140 VVD--WMIDEFGLKPDTHFYNRMLNLLVDGNSLK------LVEISHAKMSVWGIKPDVST 191
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F VLI ALCR ++ A+ +L M G D K + ++ E+ D+ A L +
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA--LRIREQ 249
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEG 313
M + G + ++ KE R DAL + +M QDG PD + +++G+ G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
E+ D ML G PDVYTYN I+GLCK +V EA++++D MI C PN VT N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ LC+ + +A + + + KG+ ++ T+ ++ GL A L EEM K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P T++ +I +C KG ++EAL ++K++
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 33/312 (10%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE------ 247
T+ +IS LC++ V AV++L+ MI + + +IS+LC++N V A
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 248 ---------------------------ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERG 280
A+ ++ +MR G P + +I L + +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 281 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 340
+AL +L QM+ G V+ Y ++ G + +E+FDEM V G+ + TYN
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
I+GLCK +V++A Q++D MI G KP+ T N+LL C GD+ KA +++ M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
E ++ TY ++ GL + AS LL + K ++ +I + +K EA+
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 461 LMKKIVAKSFAP 472
L ++++ ++ AP
Sbjct: 632 LFREMLEQNEAP 643
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 3/291 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMI-EDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+ V++ C+ RV+ A+ + M +DGF D + +++ LC+ V A+ +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV--KHAIEIM 318
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M + G+ P V + +I L K +A+ +L+QM P+ V Y ++S + E
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ EL + G++PDV T+N I GLC A+++ + M GC+P+ T
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N L+ +LC G L +A ++K+M L G ++ TY ++DG + EA + +EM
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
S T++ +I +C+ + +A +LM +++ + P + +LL H
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 131/300 (43%), Gaps = 20/300 (6%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVY--LIR 129
L + +S C+P Y LI +L + L + L+ L+++E + Y LI
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE---ALNMLKQMELSGCARSVITYNTLID 478
Query: 130 FYGLADRIQDAVDLFFRIPRF---RCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHM 186
+ A++ ++A ++F + R + T ++ Q++++ Q
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-- 536
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
+ ++ T+ L++ CR + A I+ M +G D +IS LC+ V A
Sbjct: 537 --KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIV 305
L+ M+ + P + +I+ L ++ + +A+ + +M +Q+ PD V Y IV
Sbjct: 595 SKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 306 LSGIVAEGDYVKLDELFD---EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
G+ G ++ E D E+L G +P+ + + GL + + +++V+ +++
Sbjct: 653 FRGLCNGGGPIR--EAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 9/293 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ C R++ A+ ++N M+E G D + + II SLC+ V A L ++
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA--LSLFD 201
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P V+ +T ++ L R DA +L M + IKPDV+ + ++ V EG
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ +EL++EM+ + + P+++TY ING C + VDEA Q+ M GC P+VV
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEML 431
+L+ C+ + A + EM KG+ N TY ++ G VGK + + + M+
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE--VFSHMV 379
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEAL---ELMKKIVAKSFAPGARAWEALL 481
+ P T++ ++ C+C G + +AL E M+K AP + LL
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 2/291 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L++ + ++++ D + + + + G D C+L+++ C+ + A + + G
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL--GK 132
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M KLGF P ++ FT +I R +A+ ++NQM + GIKPDVV YT ++ + G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
LFD+M G+ PDV Y +NGLC + +A ++ M K KP+V+T N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ A + G A+ + EM + N+ TY +++G + + EA + M K
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
+P + ++I C+ +++A+++ ++ K + L+ G
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 120/235 (51%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EAL ++ M + P ++DFT ++ + K ++ + + + ++ G+ D+ +++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ +M+ LG PD+ T+ ING C N+++EA+ +V+ M+++G K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P+VV T++ +LC+ G ++ A + +M G+ ++ Y +++GL +A L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L M K+ P TF+ +I ++G +A EL +++ S AP + +L+
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
KI+ + TF LI A + + A ++ N MI + + +I+ C + V A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+ M G P V+ +T +I K ++ DA+ I +M Q G+ + + YT ++
Sbjct: 302 RQMFYL--METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL--- 363
G G E+F M+ G+ P++ TYNV ++ LC KV +A+ I + M K
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G PN+ T N LL LC G L KA V ++M + +++ + TY I++ G+ ++ A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
L + K P T+ +I + ++GL +EA L +K+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 136/334 (40%), Gaps = 7/334 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
+L D ++Y P Y L+ L N+ +D +L + + K + F LI
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKIKPDVITFNALIDA 256
Query: 131 YGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
+ + DA +L+ + R P + Q+ +
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE-ARQMFYLMETKGCFP 315
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ + LI+ C+ ++VD A+KI M + G + + +I + A+
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE-- 373
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ---DGIKPDVVCYTIVLS 307
V+ M G P + + ++ L + AL I M++ DG+ P++ Y ++L
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G+ G K +F++M + + TY + I G+CK KV A+ + S+ G KP
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
NVVT T++ L G +A + ++M GV
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 160/339 (47%), Gaps = 37/339 (10%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
IL K + + T L++ CR RV AV +++ M+E G+ D + II SL
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ V +A + ++ + G P V+ +T ++ L R DA +L+ M + I P
Sbjct: 201 CKTKRVN--DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+V+ Y+ +L V G ++ ELF+EM+ + + PD+ TY+ INGLC +++DEA Q+
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 358 DSMIKLGCKPNVVTCNTLLGALC-----------------------------------EA 382
D M+ GC +VV+ NTL+ C +A
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
GD+ KA+ +M G+ ++ TY I+L GL E+ +A ++ E+M K+ T+
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I MC+ G + EA L + K P + ++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 129/240 (53%)
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
D+ +A+ ++ DM K P ++DF ++ +VK ++ + + +M+ GI+ D+
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
+ IV++ + +ML LG PD T +NG C++N+V +A+ +VD M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
++G KP++V N ++ +LC+ ++ A KE+ KG+ N+ TY +++GL +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+A+ LL +M+KK P T+ ++ + G + EA EL +++V S P + +L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 166/404 (41%), Gaps = 51/404 (12%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
+L+D P AY +I +L T + D D + +E+ + Y
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND---AFDFFKEIERKGIRPNVVTYTALV 232
Query: 131 YGL--ADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
GL + R DA L + + + TP V ++ + M I
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE-AKELFEEMVRMSI 291
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
+ T+ LI+ LC R+D A ++ + M+ G C DV S
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG---------------CLA-DVVSYNT 335
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
L+ GFC K +R D + + +M Q G+ + V Y ++ G
Sbjct: 336 LIN-------GFC--------------KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
GD K E F +M G+ PD++TYN+ + GLC ++++A+ I + M K +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+VT T++ +C+ G + +A + + LKG++ ++ TY M+ GL K + E L
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+M ++ C G I + EL+KK+++ +AP
Sbjct: 495 KMKQEGLMKND--------CTLSDGDITLSAELIKKMLSCGYAP 530
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL IL +M + G +PD V +++G L D+M+ +G PD+ YN I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
LCK +V++A + + G +PNVVT L+ LC + S A ++ +M K +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
N+ TY +LD V ++ EA L EEM++ P T+ ++I +C I+EA ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 463 KKIVAKSFAPGARAWEALL 481
+V+K ++ L+
Sbjct: 319 DLMVSKGCLADVVSYNTLI 337
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+++ LC+ +D A +LN M + I S +I SLC+ +AL ++
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH--EDDALNLFT 284
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ ++ +I L ER DA +L+ M + I P+VV + ++ V EG
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+A + + + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P T++ ++ +C+ G + +A+ + + + P + ++
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 169/346 (48%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ DA+ LF + + R P++ +V + K Q + I T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD-LVISLGEKMQRLGISHNLYTY 123
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+LI+ CR ++ A+ +L M++ G+ S +++ C ++ A ALV M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV--DQM 181
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G+ P + FT +I L + +A+ ++++M Q G +P++V Y +V++G+ GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L ++M + +V Y+ I+ LCK D+A+ + M G +PNV+T ++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 4/371 (1%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
L+D C P Y ++ L + +L+ +E K E I+ +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEANVVIYSTVIDS 269
Query: 131 YGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
DA++LF + P V ++L KI
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD-ASRLLSDMIERKINP 328
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
TF LI A + ++ A K+ + MI+ D S +I+ C + + A+ +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
M P V+ + +I K +R + + + +M Q G+ + V YT ++ G
Sbjct: 389 EL--MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
D +F +M+ G+ P++ TYN ++GLCK K+++A+ + + + + +P +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N ++ +C+AG + + + LKGV+ ++ Y M+ G K EA L +M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 431 LKKCFYPRSST 441
+ P S T
Sbjct: 567 REDGPLPDSGT 577
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ WG F G D+ +++R + + DA+ + M + P + + +LS
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLS 93
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
I + + L ++M LG+ ++YTYN+ IN C+++++ A+ ++ M+KLG +P
Sbjct: 94 AIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP 153
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
++VT ++LL C +S A ++ +M G + T+ ++ GL + EA L+
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+ M+++ P T+ ++ +C++G I+ A L+ K+ A
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 158/289 (54%), Gaps = 2/289 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LI A CR V +A+K+L+ M + G D +++++ +C++ + EA+
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD--EAIKFLN 298
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM G P V+ ++R + R MDA +L M + G P VV + I+++ + +G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++ ++M G P+ +YN ++G CK+ K+D AI+ ++ M+ GC P++VT N
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T+L ALC+ G + A ++ ++ KG L TY ++DGL + G+A LL+EM K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
P + T+ +++ + ++G ++EA++ + P A + +++L
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 151/288 (52%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL++ +C+ R+D A+K LN M G + ++I+ S+C AE L+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA-- 333
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM + GF P V+ F +I FL ++ A+ IL +M Q G +P+ + Y +L G E
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ E + M+ G PD+ TYN + LCK KV++A++I++ + GC P ++T N
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T++ L +AG KA ++ EM K ++ + TY ++ GL + ++ EA E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + TF++I+ +C+ + A++ + ++ + P ++ L+
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 154/285 (54%), Gaps = 5/285 (1%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
LI CR+ + A KIL + G D +++IS C+ ++ +A ++ +
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV-----LD 196
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
++ P V+ + ++R L + A+ +L++M Q PDV+ YTI++ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+L DEM G PDV TYNV +NG+CK+ ++DEAI+ ++ M GC+PNV+T N +L
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
++C G A+ ++ +M KG ++ T+ I+++ L K +G A +LE+M +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P S +++ ++ C++ ++ A+E ++++V++ P + +L
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 148/279 (53%), Gaps = 5/279 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+IS C+ ++ A+ +L+ M D + I+ SLC+ + +A+ V
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKL--KQAMEVLD 228
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + P V+ +T +I ++ A+ +L++M+ G PDVV Y ++++GI EG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + ++M G P+V T+N+ + +C + +A +++ M++ G P+VVT N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ LC G L +A ++++M G + N +Y +L G + ++ A LE M+ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
YP T++ ++ +C+ G + +A+E++ ++ +K +P
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 164/374 (43%), Gaps = 12/374 (3%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFI-FVYLIRF 130
++D C P Y LI+ S + +LD + ++ TP+ + + L+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR--DRGCTPDVVTYNVLVNG 283
Query: 131 YGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXX---XXXMVPQILLKSQHMK 187
R+ +A+ +P C P V ++ +L K
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ TF +LI+ LCR + A+ IL M + G + + ++ C++ +
Sbjct: 344 V----VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD--R 397
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A+ M G P ++ + M+ L K+ + DA+ ILNQ+ G P ++ Y V+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G+ G K +L DEM L PD TY+ + GL ++ KVDEAI+ ++G +P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
N VT N+++ LC++ +A + M +G + N +Y I+++GL + EA LL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 428 EEMLKKCFYPRSST 441
E+ K +SS
Sbjct: 578 NELCNKGLMKKSSA 591
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 32/255 (12%)
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG----- 313
G P ++ T +IR + + A IL ++ G PDV+ Y +++SG G
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 314 ------------------------DYVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCK 346
D KL E+ D ML PDV TY + I C+
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
+ V A++++D M GC P+VVT N L+ +C+ G L +A + +M G + N+ T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
+ I+L + +A LL +ML+K F P TF+ +I +C+KGL+ A+++++K+
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 467 AKSFAPGARAWEALL 481
P + ++ LL
Sbjct: 372 QHGCQPNSLSYNPLL 386
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 265 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
++ + +R +V+ + L M G PD++ T ++ G G K ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
+ G +PDV TYNV I+G CK +++ A+ ++D M P+VVT NT+L +LC++G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
L +A V+ M + ++ TY I+++ + +G A LL+EM + P T++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAP 472
++ +C++G ++EA++ + + + P
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
L +V G+ + + + M+ G +PD+ I G C+ K +A +I++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
P+V+T N ++ C+AG+++ A V+ M V ++ TY +L L ++ +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+L+ ML++ YP T+ +I C+ + A++L+ ++ + P + L+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
N ++ + + +++E + +++M+ G P+++ C TL+ C G KA +++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
G ++ TY +M+ G EI A +L+ M P T++ I+ +C G + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 458 ALELMKKIVAKSFAPGARAWEALL 481
A+E++ +++ + P + L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILI 246
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 193/425 (45%), Gaps = 34/425 (8%)
Query: 79 YSCDPTPNAYYFLIKTLVNTS-HLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRI 137
YSC+PT +Y +++ LV+ + H D L R K F F +++ + + I
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR--KIPPTLFTFGVVMKAFCAVNEI 233
Query: 138 QDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRV 197
A+ L + + C P + Q+L + M + TF
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL-QLLEEMFLMGCVPDAETFND 292
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA----------- 246
+I LC+ R++ A K++N M+ GF D +++ LC+ V +A
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 247 ------------------EALVVWGDM-RKLGFCPGVMDFTDMIRFLVKEERGMDALYIL 287
+A V DM G P V + +I KE AL +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 288 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 347
+ M+ G KP+V YTI++ G G + + +EM GL P+ +N I+ CK+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 348 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
+++ EA++I M + GCKP+V T N+L+ LCE ++ A ++++M +GV N TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 408 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+++ + + EI EA L+ EM+ + T++++I +C+ G +++A L +K++
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 468 KSFAP 472
AP
Sbjct: 593 DGHAP 597
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 152/288 (52%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +L+ C++ ++D A +LN M DG + + +IS+ C+++ + EA+ ++
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI--PEAVEIFR 483
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G P V F +I L + + AL++L M +G+ + V Y +++ + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + +L +EM+ G D TYN I GLC+ +VD+A + + M++ G P+ ++CN
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ LC +G + +A KEM L+G ++ T+ +++GL I + + ++ +
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + TF+ ++ +C+ G + +A L+ + + F P R W LL
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 182/402 (45%), Gaps = 42/402 (10%)
Query: 80 SCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQD 139
C P + +I L + + +++ + + F + + YL+ R+
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRM-LIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 140 AVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLI 199
A DLF+RIP+ P+I++ F LI
Sbjct: 341 AKDLFYRIPK---------------------------PEIVI-------------FNTLI 360
Query: 200 SALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG 259
R+D A +L+ M+ +G+ +C+ + AL V DMR G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTS-YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
P V +T ++ K + +A +LN+M DG+KP+ V + ++S E +
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
E+F EM G PDVYT+N I+GLC+ +++ A+ ++ MI G N VT NTL+ A
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
G++ +A+ ++ EM +G L+ TY ++ GL E+ +A L E+ML+ P +
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + +I +C+ G++ EA+E K++V + P + +L+
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 231 SLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM 290
+++ + C N++ SA +L+ DM K G P + + +I L K R +AL +L +M
Sbjct: 221 GVVMKAFCAVNEIDSALSLL--RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
G PD + V+ G+ + ++ + ML+ G PD TY +NGLCK +V
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 351 DEA-----------IQIVDSMI---------------------KLGCKPNVVTCNTLLGA 378
D A I I +++I G P+V T N+L+
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
+ G + A V+ +M KG + N+++Y I++DG +I EA +L EM P
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ F+ +I C++ I EA+E+ +++ K P + +L+
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 145/344 (42%), Gaps = 39/344 (11%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
++ ++ C P +Y L+ + + VL+ + + + F LI +
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS-ADGLKPNTVGFNCLISAF 469
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
RI +AV++F +PR C P V
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVY---------------------------------- 495
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
TF LIS LC + + +A+ +L MI +G + + +I++ + ++ A LV
Sbjct: 496 --TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV- 552
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+M G + + +I+ L + A + +M +DG P + I+++G+
Sbjct: 553 -NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G + E EM++ G PD+ T+N INGLC+ ++++ + + + G P+ VT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
NTL+ LC+ G + A ++ E G N T+ I+L ++
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 254 DMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+MR + C P + ++ LV A + M I P + + +V+ A
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ L +M G +P+ Y I+ L K N+V+EA+Q+++ M +GC P+ T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N ++ LC+ +++A ++ M ++G + TY +++GL + A L + K
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
P F+ +I G +++A ++ +V
Sbjct: 351 ----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 277 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVY 335
E + +D L I QMK +GI + ++ G + L EM V P
Sbjct: 126 EFKTIDRLLI--QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFK 183
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
+YNV + L N A + M+ P + T ++ A C ++ A ++++M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
G N Y+ ++ L + EA LLEEM P + TF+++I +C+ I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 456 NEALELMKKIVAKSFAP 472
NEA +++ +++ + FAP
Sbjct: 304 NEAAKMVNRMLIRGFAP 320
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
Q+G + Y +++ + A G++ +D L +M G+ V+ +++I+ + +K
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAG 160
Query: 352 EAIQIVDSMIKL----GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
Q M+++ C+P + N +L L A V +M + + L T+
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 408 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+++ EI A LL +M K P S + +I + + +NEAL+L++++
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 468 KSFAPGARAWEALLL 482
P A + ++L
Sbjct: 281 MGCVPDAETFNDVIL 295
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 171/346 (49%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ DAVDLF + + R P++ +V + + Q + I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE-LVISLGEQMQTLGISHDLYTY 121
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+ I+ CR ++ A+ +L M++ G+ D S +++ C ++ A ALV M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV--DQM 179
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G+ P FT +I L + +A+ +++QM Q G +PD+V Y V++G+ GD
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L ++M + +V +N I+ LCK V+ A+ + M G +PNVVT N+L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC G S A ++ M K + N+ T+ ++D + ++ EA L EEM+++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + T++ +I C ++EA ++ K +V+K P + + L+
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +++ LC+ +D A+ +LN M + I + II SLC+ V A L +
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL--FT 282
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ + +I L R DA +L+ M + I P+VV + ++ EG
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L +EM+ + PD TYN+ ING C N++DEA Q+ M+ C PN+ T N
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+ + + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMK 463
T+ ++ +C G ++ AL + K
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 169/372 (45%), Gaps = 6/372 (1%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADRIQDAVDLFFRIPR 149
L+ ++ + D ++D + VE P+ F F LI L ++ +AV L ++ +
Sbjct: 159 LLNGYCHSKRISDAVALVDQM--VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 150 FRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVD 209
C P + + +L K + +I+ F +I +LC+ R V+
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDID-LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 210 YAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTD 269
AV + M G + + +I+ LC + A L+ +M + P V+ F
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL--SNMLEKKINPNVVTFNA 333
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 329
+I KE + ++A + +M Q I PD + Y ++++G + ++F M+
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 389
+P++ TYN ING CK +V++ +++ M + G N VT T++ +AGD A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
V K+M V ++ TY I+L GL ++ A ++ + + K ++ +I M
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 450 CQKGLINEALEL 461
C+ G + EA +L
Sbjct: 514 CKAGKVGEAWDL 525
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 166/422 (39%), Gaps = 41/422 (9%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVE--KFETPEFIFVYLIR 129
L+D C P Y ++ L DI L+ L ++E + + IF +I
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRG---DIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 130 FYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIR 189
++ AVDLF + P V ++L KI
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD-ASRLLSNMLEKKIN 325
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
TF LI A + ++ A K+ MI+ D +L+I+ C N + A+ +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ M P + + +I K +R D + + +M Q G+ + V YT ++ G
Sbjct: 386 FKF--MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI------------- 356
GD +F +M+ + D+ TY++ ++GLC K+D A+ I
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 357 ------VDSMIKLG-------------CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
++ M K G KP+VVT NT++ LC L +A + ++M
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
G N TY ++ + + ++ L++EM F +ST +++ M G +++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDK 622
Query: 458 AL 459
+
Sbjct: 623 SF 624
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 2/274 (0%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E T+ +++ +C+ + A+++L M E LD S+II LC+ + +A L
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL-- 285
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ +M GF ++ + +I R D +L M + I P+VV +++++ V
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
EG + D+L EM+ G+ P+ TYN I+G CK+N+++EAIQ+VD MI GC P+++T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N L+ C+A + + +EM L+GV N TY ++ G ++ A L +EM+
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ P ++ ++ +C G + +ALE+ KI
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 2/304 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L K + I+++ + ++I LC+ +D A + N M GF D + +I
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C L+ DM K P V+ F+ +I VKE + +A +L +M Q GI P
Sbjct: 309 CNAGRWDDGAKLL--RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ + Y ++ G E + ++ D M+ G PD+ T+N+ ING CK N++D+ +++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M G N VT NTL+ C++G L AK + +EM + V ++ +Y+I+LDGL
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
E+ +A + ++ K + II MC +++A +L + K ARA+
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 478 EALL 481
++
Sbjct: 547 NIMI 550
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 173/346 (50%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
+ DAVDLF + + R PTV +V + + + I T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE-LVLALCKQMESKGIAHSIYTL 126
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
++I+ CR R++ YA + +++ G+ D I + +++ LC + V+ EAL + M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS--EALELVDRM 184
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G P ++ ++ L + DA+ ++++M + G +P+ V Y VL+ + G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
EL +M + D Y++ I+GLCK +D A + + M G K +++T NTL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+G C AG ++++M + + N+ T+ +++D V + ++ EA LL+EM+++
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + T++++I C++ + EA++++ +++K P + L+
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 156/333 (46%), Gaps = 39/333 (11%)
Query: 186 MKIRIEEST--FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
MK+ E T F L++ LC RV A+++++ M+E G + +++ LC V
Sbjct: 150 MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ +A+V+ M + GF P + + ++ + K + A+ +L +M++ IK D V Y+
Sbjct: 210 S--DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC------------------ 345
I++ G+ +G LF+EM + G D+ TYN I G C
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 346 -----------------KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
K+ K+ EA Q++ M++ G PN +T N+L+ C+ L +A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
++ M KG + ++ T+ I+++G I + L EM + + T++ ++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 449 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
CQ G + A +L +++V++ P +++ LL
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI------- 295
+ + +A+ ++ DM + P V+DF + + K ++ L + QM+ GI
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 296 ----------------------------KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
+PD V + +L+G+ E + EL D M+
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
+G P + T N +NGLC KV +A+ ++D M++ G +PN VT +L +C++G +
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
A ++++M + ++L+ Y I++DGL + A L EM K F T++ +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C G ++ +L++ ++ + +P + L+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 157/359 (43%), Gaps = 4/359 (1%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRI 147
Y +I L L + + + +E ++ F+ + LI + A R D L +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 148 PRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRR 207
+ + +P V Q+L + I T+ LI C+ R
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLRE-ADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 208 VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDF 267
++ A+++++ MI G D +++I+ C+ N + + L ++ +M G + +
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID--DGLELFREMSLRGVIANTVTY 441
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
+++ + + A + +M ++PD+V Y I+L G+ G+ K E+F ++
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
+ D+ Y + I+G+C +KVD+A + S+ G K + N ++ LC LSK
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
A + ++M +G + TY I++ +G + A+ L+EEM F ST +I
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VLI + + ++ A ++L M++ G + + +I C++N + EA+ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL--EEAIQMVD 392
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P +M F +I K R D L + +M G+ + V Y ++ G G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF EM+ + PD+ +Y + ++GLC ++++A++I + K + ++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ +C A + A + + LKGV+L+ Y IM+ L K + +A +L +M ++
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
P T++ +I A EL++++ + F
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 6/372 (1%)
Query: 112 ERVEKFETPE-FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXX 170
E +E +P F + LIR + A I A+ LF ++ C P V
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 171 XXXXMVPQILLKSQHMK-IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI 229
LL+S +K + ++ V+I+ LCR R+ +L M G+ LD
Sbjct: 255 KIDDGFK--LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 230 CSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQ 289
+ +I C++ + +ALV+ +M + G P V+ +T +I + K A+ L+Q
Sbjct: 313 YNTLIKGYCKEGNF--HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
M+ G+ P+ YT ++ G +G + + EM G P V TYN ING C K
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
+++AI +++ M + G P+VV+ +T+L C + D+ +A V +EM KG++ + TY
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 410 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
++ G + EA L EEML+ P T+ +I C +G + +AL+L ++V K
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 470 FAPGARAWEALL 481
P + L+
Sbjct: 551 VLPDVVTYSVLI 562
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 17/303 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI ++C+ ++ A++ L+ M G + + + ++ ++ + EA V
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN--EAYRVLR 404
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M GF P V+ + +I + DA+ +L MK+ G+ PDVV Y+ VLSG
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + + EM+ G+ PD TY+ I G C+Q + EA + + M+++G P+ T
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ A C GDL KA + EM KGV ++ TY ++++GL ++ EA LL ++ +
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 434 CFYPRSSTFDNII--CC-------------MCQKGLINEALELMKKIVAKSFAPGARAWE 478
P T+ +I C C KG++ EA ++ + ++ K+ P A+
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 479 ALL 481
++
Sbjct: 645 IMI 647
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 225 LDGKICSLIISSLCEQNDV---TSA----------------EALVVWGDMRKLGFCPGVM 265
LD + SL+ SL E D+ TS+ +AL + + GF PGV+
Sbjct: 111 LDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVL 170
Query: 266 DFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
+ ++ ++ +R + A + +M + + P+V Y I++ G G+ LFD+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
M G +P+V TYN I+G CK K+D+ +++ SM G +PN+++ N ++ LC G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ + V+ EM +G L+ TY ++ G + +A ++ EML+ P T+ +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I MC+ G +N A+E + ++ + P R + L+
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 52/331 (15%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ C +++ A+ +L M E G D S ++S C DV EAL V
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD--EALRVKR 474
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G P + ++ +I+ ++ R +A + +M + G+ PD YT +++ EG
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK------------------------ 349
D K +L +EM+ G++PDV TY+V INGL KQ++
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 350 --------------------------VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
+ EA Q+ +SM+ KP+ N ++ C AG
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
D+ KA + KEM G L+ T ++ L + ++ E + ++ +L+ C +
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAK 714
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGA 474
++ ++G ++ L+++ ++ F P
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 8/395 (2%)
Query: 90 FLIKTLVNTSHLQDIPPVLDHLE-RVEKFETPEFIF--VYLIRFYGLADRIQDAVDLFFR 146
F+ ++L+ PP H V F + + + + R L ++ DAV+LF
Sbjct: 14 FVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDL--KLDDAVNLFGD 71
Query: 147 IPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIR 206
+ + R P++ +V + + Q++ I T+ +LI+ CR
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFD-LVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 207 RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD 266
++ A+ +L M++ G+ D + +++ C N ++ A +LV G M ++G+ P
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV--GQMVEMGYQPDSFT 188
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
F +I L + R +A+ ++++M G +PD+V Y IV++G+ GD L +M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
+ P V YN I+ LC V++A+ + M G +PNVVT N+L+ LC G S
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+ P T+ ++I
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C ++EA + + +++K P + L+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 148/288 (51%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++++ LC+ +D A+ +L M + I + II +LC +V +AL ++
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN--DALNLFT 280
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ + +IR L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT N
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+A + + + +EM +G+ N TY ++ G E A ++ ++M+
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++ +C G + AL + + + P + ++
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 10/419 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
L+D C P Y ++ L DI L L+++E+ + + +Y
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRG---DIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 131 YGLAD--RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
L + + DA++LF + P V ++L KI
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKI 322
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
TF LI A + ++ A K+ + MI+ D S +I+ C + + A+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ M P V+ + +I+ K +R + + + +M Q G+ + V YT ++ G
Sbjct: 383 MFEL--MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ +F +M+ G++PD+ TY++ ++GLC KV+ A+ + + + + +P+
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ T N ++ +C+AG + + + LKGV+ N+ TY M+ G K EA L
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 485
EM ++ P S T++ +I + G + EL++++ + F A + +LH G
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 188/386 (48%), Gaps = 10/386 (2%)
Query: 101 LQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTP---TV 156
L++IP + +E +EKF P+ F + LI + +RI DA + R+ +P T
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 157 XXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILN 216
++ Q+L + + T+ +LI A VD A+K+++
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV----ITYTILIEATMLEGGVDEALKLMD 252
Query: 217 CMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVK 276
M+ G D + II +C++ V A +V +++ G P V+ + ++R L+
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK--GCEPDVISYNILLRALLN 310
Query: 277 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 336
+ + + ++ +M + P+VV Y+I+++ + +G + L M GL PD Y+
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 337 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 396
Y+ I C++ ++D AI+ +++MI GC P++V NT+L LC+ G +A + ++G
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 397 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
G N +Y M L + A ++ EM+ P T++++I C+C++G+++
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 457 EALELMKKIVAKSFAPGARAWEALLL 482
EA EL+ + + F P + +LL
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLL 516
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 151/285 (52%), Gaps = 5/285 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGL-DGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
LI +R + AV+++ I + FG D + +I+ C+ N + +A V MR
Sbjct: 130 LIKGFFTLRNIPKAVRVME--ILEKFGQPDVFAYNALINGFCKMNRID--DATRVLDRMR 185
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
F P + + MI L + AL +LNQ+ D +P V+ YTI++ + EG
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ +L DEML GL PD++TYN I G+CK+ VD A ++V ++ GC+P+V++ N LL
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
AL G + + +M +M + + N+ TY I++ L +I EA LL+ M +K
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + ++D +I C++G ++ A+E ++ +++ P + +L
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 9/282 (3%)
Query: 203 CRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCP 262
CR ++ +L M+ G+ D +C+ +I ++ +A+ V + K G P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI--PKAVRVMEILEKFG-QP 156
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD--- 319
V + +I K R DA +L++M+ PD V Y I++ + + G KLD
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG---KLDLAL 213
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
++ +++L P V TY + I + VDEA++++D M+ G KP++ T NT++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
C+ G + +A +++ + LKG E ++ +Y I+L L+ + + E L+ +M + P
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
T+ +I +C+ G I EA+ L+K + K P A +++ L+
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LI+ LCR +++ A+ +L M E G D +I++ C + + A +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA--IEFLE 392
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P ++++ ++ L K + AL I ++ + G P+ Y + S + + G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D ++ + EM+ G+ PD TYN I+ LC++ VDEA +++ M P+VVT N
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+L C+A + A V++ M G N TY ++++G+ EA L ++++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +L+ AL + + K++ M + + S++I++LC + EA+ +
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI--EEAMNLLK 357
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G P + +I +E R A+ L M DG PD+V Y VL+ + G
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ E+F ++ +G P+ +YN + L A+ ++ M+ G P+ +T N
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+++ LC G + +A ++ +M ++ TY I+L G I +A +LE M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
P +T+ +I + G EA+EL +V
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 78 SYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADR 136
S CDP Y LI TL +++ +L ++ EK TP+ + + LI + R
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGR 383
Query: 137 IQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFR 196
+ A++ + C P + + +I K + S++
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL-EIFGKLGEVGCSPNSSSYN 442
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
+ SAL A+ ++ M+ +G D + +IS LC + V A L+V DMR
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV--DMR 500
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
F P V+ + ++ K R DA+ +L M +G +P+ YT+++ GI G
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 317 KLDELFDEMLVLGLIPD 333
+ EL ++++ + I +
Sbjct: 561 EAMELANDLVRIDAISE 577
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I+ LC+ D A+ +LN M + D I S +I SLC+ V +AL ++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD--DALNLFT 264
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V ++ +I L R DA +L+ M + I P+VV + ++ EG
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ ++LFDEM+ + P++ TYN ING C +++DEA QI M+ C P+VVT N
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+A + + ++M +G+ N TY ++ G ++ A ++ ++M+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+P T++ ++ +C+ G + +A+ + + + P
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 172/346 (49%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ +AVDLF + + R P++ +V K + + + T+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD-LVISFGEKMEILGVSHNLYTY 103
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
++I+ LCR ++ +A+ IL M++ G+G + +++ C N ++ A ALV M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV--DQM 161
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G+ P + FT ++ L + + +A+ ++ +M G +PD+V Y V++G+ G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L ++M + DV Y+ I+ LCK VD+A+ + M G +P+V T ++L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC G S A ++ +M + + N+ T+ ++D + ++ EA L +EM+++
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T++++I C ++EA ++ +V+K P + L+
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 2/304 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+L K + KI + + +I +LC+ R VD A+ + M G D S +IS L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C + A L+ DM + P V+ F +I KE + ++A + ++M Q I P
Sbjct: 286 CNYGRWSDASRLL--SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
++V Y +++G + ++F M+ +PDV TYN ING CK KV + +++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M + G N VT TL+ +A D A+ V K+M GV N+ TY +LDGL
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
++ +A ++ E + K P T++ + MC+ G + + +L + K P A+
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 478 EALL 481
++
Sbjct: 524 NTMI 527
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 4/301 (1%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
KI TF LI A + ++ A K+ + MI+ + + +I+ C + + A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+ + M P V+ + +I K ++ +D + + M + G+ + V YT ++
Sbjct: 365 QQIFTL--MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G D +F +M+ G+ P++ TYN ++GLCK K+++A+ + + + K +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P++ T N + +C+AG + + + LKGV+ ++ Y M+ G K EA L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHS 484
+M + P S T++ +I + G + EL+K++ + FA A + + +LH
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Query: 485 G 485
G
Sbjct: 603 G 603
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF L+ L + + AV ++ M+ G D +I+ LC++ + AL +
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE--PDLALNLLN 229
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K V+ ++ +I L K DAL + +M GI+PDV Y+ ++S + G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ L +ML + P+V T+N I+ K+ K+ EA ++ D MI+ PN+VT N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C L +A+ + M K ++ TY +++G ++ + L +M ++
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ +I Q + A + K++V+ P + LL
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 315 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
++KLDE LF EM+ P + ++ ++ + K K D I + M LG N+ T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N ++ LC LS A ++ +M G ++ T +L+G I EA L+++M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + P + TF ++ + Q +EA+ L++++V K P + A++
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 186/398 (46%), Gaps = 12/398 (3%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRI 147
Y +I L + ++ VL HL+ + E IF +I F+G A+ +F +
Sbjct: 50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM 109
Query: 148 PRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRR 207
P++RC TV M + L S + + T+ +LI +
Sbjct: 110 PQYRCQRTVKSLNSLLSALLKCGELEKMKER--LSSIDEFGKPDACTYNILIHGCSQSGC 167
Query: 208 VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKL-GFCPGVMD 266
D A+K+ + M++ G +I LC+ + V EAL + DM K+ G P V
Sbjct: 168 FDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV--KEALKMKHDMLKVYGVRPTVHI 225
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+ +I+ L + A + ++ + IK D Y+ ++S ++ G ++ + +EM
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
G PD TYNV ING C +N + A +++D M++ G KP+V++ N +LG
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+A + ++M +G + +YRI+ DGL + EA+++L+EML K + PR + +
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 447 CCMCQKGLINEALELMKKIVA---KSFAPGARAWEALL 481
+C+ G LE++ K+++ + A A W ++
Sbjct: 406 QKLCESG----KLEILSKVISSLHRGIAGDADVWSVMI 439
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 170/346 (49%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ DAVDLF + + R P++ +V + + Q + I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSI-VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+ I+ CR ++ A+ +L M++ G+ D S +++ C ++ A ALV M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV--DQM 179
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G+ P FT +I L + +A+ +++QM Q G +PD+V Y V++G+ GD
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L +M + DV YN I+GLCK +D+A+ + M G +P+V T ++L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC G S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 155/323 (47%), Gaps = 37/323 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +++ LC+ +D A+ +L M + D I + II LC+ + +AL ++
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD--DALNLFT 282
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V ++ +I L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT +
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 374 TLLGALC-----------------------------------EAGDLSKAKGVMKEMGLK 398
TL+ C +A D A+ V K+M
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
GV N+ TY I+LDGL ++ +A ++ E + + P T++ +I MC+ G + +
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
EL + K +P A+ ++
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMI 545
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 10/419 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
L+D C P Y ++ L DI L L+++EK + + +Y
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRG---DIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 131 YGLAD--RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
GL + DA++LF + P V ++L KI
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-ASRLLSDMIERKI 324
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
TF LI A + ++ A K+ + MI+ D S +I+ C + + A+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ M P V+ ++ +I+ K +R + + + +M Q G+ + V YT ++ G
Sbjct: 385 MFEL--MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
D +F +M+ +G+ P++ TYN+ ++GLCK K+ +A+ + + + + +P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ T N ++ +C+AG + + + LKGV N+ Y M+ G K EA LL+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 485
+M + P S T++ +I + G + EL+K++ + FA A + +LH G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 8/291 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T L++ C +R+ AV +++ M+E G+ D + +I L N + A ALV
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV--D 212
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P ++ + ++ L K AL +L +M++ I+ DVV Y ++ G+
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK-- 270
Query: 314 DYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
Y +D+ LF EM G+ PDV+TY+ I+ LC + +A +++ MI+ PNVV
Sbjct: 271 -YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T + L+ A + G L +A+ + EM + ++ ++ TY +++G + EA + E M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ K +P T+ +I C+ + E +EL +++ + + L+
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 38/190 (20%)
Query: 314 DYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVD------------------- 351
D +K+D+ LF +M+ P + +N ++ + K NK +
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 352 ----------------EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
A+ ++ M+KLG +P++VT ++LL C + +S A ++ +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
G + + T+ ++ GL + EA L+++M+++ P T+ ++ +C++G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 456 NEALELMKKI 465
+ AL L+KK+
Sbjct: 240 DLALSLLKKM 249
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +++ LC+ +D A+ +L M + D I + II +LC +V +AL ++
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN--DALNLFT 279
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ + +IR L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT N
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+A + + + +EM +G+ N TY ++ GL + A + ++M+
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++ +C+ G + +AL + + + P + ++
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 167/346 (48%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ DAVDLF + + R P++ +V + + Q+++I + ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD-LVISLGERMQNLRISYDLYSY 118
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+LI+ CR ++ A+ +L M++ G+ D S +++ C ++ A ALV M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV--DQM 176
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
+ + P + F +I L + +A+ ++++M G +PD+ Y V++G+ GD
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L +M + DV Y I+ LC V++A+ + M G +PNVVT N+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC G S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 10/419 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
LID + C P Y ++ L DI L L+++EK + + +Y
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRG---DIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 131 YGLAD--RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
L + + DA++LF + P V ++L KI
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKI 321
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
TF LI A + ++ A K+ + MI+ D S +I+ C + + A+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ M P V+ + +I+ K +R + + + +M Q G+ + V Y ++ G
Sbjct: 382 MFEL--MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ GD ++F +M+ G+ PD+ TY++ ++GLCK K+++A+ + + + K +P+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ T N ++ +C+AG + + + LKGV+ N+ Y M+ G K EA L
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 485
EM + P S T++ +I + G + EL+K++ + F A + +LH G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ C R+D A + MI + + +I C+ V E + ++
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV--EEGMELFR 419
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G + + +I+ L + A I +M DG+ PD++ Y+I+L G+ G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K +F+ + + PD+YTYN+ I G+CK KV++ + S+ G KPNV+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T++ C G +A + +EM G N TY ++ + + ++ L++EM
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELM 462
F +ST +I + L LE++
Sbjct: 600 GFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 38/188 (20%)
Query: 316 VKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVD--------------------- 351
+KLD+ LF EM+ +P + +N ++ + K NK D
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 352 --------------EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
A+ ++ M+KLG +P++VT ++LL C +S+A ++ +M +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
+ N T+ ++ GL + EA L++ M+ + P T+ ++ +C++G I+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 458 ALELMKKI 465
AL L+KK+
Sbjct: 239 ALSLLKKM 246
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 186/400 (46%), Gaps = 8/400 (2%)
Query: 85 PNAYYFLIKTLVNTSHLQD-IPPVLDHLER-VEKFETPEFIFV-YLIRFYGLADRIQDAV 141
PN F TL+N L+ + L+ ++R VE P+ I + L+ L+ + +A+
Sbjct: 156 PNTITF--STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 142 DLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISA 201
L ++ + C P + ++L K + I+++ + ++I
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 202 LCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFC 261
LC+ +D A + N M G + +++I C L+ DM K
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL--RDMIKRKIN 330
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ F+ +I VKE + +A + +M GI PD + YT ++ G E K +++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
D M+ G P++ T+N+ ING CK N++D+ +++ M G + VT NTL+ CE
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G L+ AK + +EM + V N+ TY+I+LDGL E +A + E++ K
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ II MC +++A +L + K PG + + ++
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 170/352 (48%), Gaps = 6/352 (1%)
Query: 132 GLAD-RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMK-IR 189
GL D + DA+DLF + R PTV ++ L K +K I
Sbjct: 63 GLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLA--LCKQMELKGIA 120
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
T ++I+ CR R++ A + +I+ G+ + S +I+ LC + V+ EAL
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS--EAL 178
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ M ++G P ++ ++ L + +A+ ++++M + G +P+ V Y VL+ +
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G EL +M + D Y++ I+GLCK +D A + + M G N+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
+T N L+G C AG ++++M + + N+ T+ +++D V + ++ EA L +E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M+ + P + T+ ++I C++ +++A +++ +V+K P R + L+
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 2/288 (0%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
KI TF VLI + + ++ A ++ MI G D + +I C++N + A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+V M G P + F +I K R D L + +M G+ D V Y ++
Sbjct: 388 NQMVDL--MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G G ELF EM+ + P++ TY + ++GLC + ++A++I + + K +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
++ N ++ +C A + A + + LKGV+ + TY IM+ GL K + EA LL
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+M + P T++ +I G ++++L++++ F+ A
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 133/262 (50%), Gaps = 2/262 (0%)
Query: 185 HMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVT 244
H I + T+ LI C+ +D A ++++ M+ G + + +++I+ C+ N +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 245 SAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTI 304
+ L ++ M G + + +I+ + + A + +M + P++V Y I
Sbjct: 421 --DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
+L G+ G+ K E+F+++ + D+ YN+ I+G+C +KVD+A + S+ G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
KP V T N ++G LC+ G LS+A+ + ++M G + TY I++ +G + ++
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 425 LLLEEMLKKCFYPRSSTFDNII 446
L+EE+ + F +ST +I
Sbjct: 599 KLIEELKRCGFSVDASTIKMVI 620
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 112/217 (51%)
Query: 265 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
+ + + +R + + + DA+ + M P V+ ++ + S I Y + L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
M + G+ ++YT ++ IN C+ K+ A + +IKLG +PN +T +TL+ LC G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+S+A ++ M G + +L T +++GL + EA LL+++M++ P + T+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ MC+ G A+EL++K+ ++ A + ++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 189/396 (47%), Gaps = 4/396 (1%)
Query: 87 AYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD-RIQDAVDLFF 145
A F+ ++LV + + P R + + + GL++ ++ DAV LF
Sbjct: 11 AKRFVHRSLVVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFG 70
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
+ + R P++ ++ + + Q++ I T+ +LI+ CR
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI-SLGEQMQNLGIPHNHYTYSILINCFCRR 129
Query: 206 RRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
++ A+ +L M++ G+ + S +++ C ++ A ALV M G+ P +
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV--DQMFVTGYQPNTV 187
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
F +I L + +A+ ++++M G +PD+V Y +V++G+ GD L ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
L P V YN I+GLCK +D+A+ + M G +PNVVT ++L+ LC G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
S A ++ +M + + ++ T+ ++D V + ++ EA L +EM+K+ P T+ ++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 446 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
I C ++EA ++ + +V+K P + L+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+++ LC+ D A +LN M + I + II LC+ + +AL ++
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD--DALNLFK 280
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ ++ +I L R DA +L+ M + I PDV ++ ++ V EG
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
V+ ++L+DEM+ + P + TY+ ING C +++DEA Q+ + M+ C P+VVT N
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+ + + V +EM +G+ N TY I++ GL + A + +EM+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
P T++ ++ +C+ G + +A+ + + + P
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 2/304 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+L K + K+ + +I LC+ + +D A+ + M G + S +IS L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C + A L+ DM + P V F+ +I VKE + ++A + ++M + I P
Sbjct: 302 CNYGRWSDASRLL--SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+V Y+ +++G + ++F+ M+ PDV TYN I G CK +V+E +++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M + G N VT N L+ L +AGD A+ + KEM GV N+ TY +LDGL
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
++ +A ++ E + + P T++ +I MC+ G + + +L + K P A+
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 478 EALL 481
++
Sbjct: 540 NTMI 543
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 39/335 (11%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
IR T+ LIS LC R A ++L+ MIE D S +I + ++ + AE
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 248 ALVVWGDMRKL--------------GFC---------------------PGVMDFTDMIR 272
L + +M K GFC P V+ + +I+
Sbjct: 347 KL--YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 273 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 332
K +R + + + +M Q G+ + V Y I++ G+ GD E+F EM+ G+ P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
++ TYN ++GLCK K+++A+ + + + + +P + T N ++ +C+AG + +
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
+ LKGV+ ++ Y M+ G K EA L +EM + P S ++ +I +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 453 GLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 485
G + EL+K++ + FA A + +LH G
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 144/268 (53%), Gaps = 2/268 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+++ LC+ D A+ +LN M D I + II SLC+ V +AL ++
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNLFK 284
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ ++ +I L R DA +L+ M + I P++V + ++ V EG
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+V+ ++L+D+M+ + PD++TYN +NG C +++D+A Q+ + M+ C P+VVT N
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C++ + + +EM +G+ + TY ++ GL + A + ++M+
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALEL 461
P T+ ++ +C G + +ALE+
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 176/351 (50%), Gaps = 4/351 (1%)
Query: 132 GLAD-RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
GL D ++ DA+ LF + + R P++ ++ + K Q ++I
Sbjct: 60 GLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI-SLGEKMQRLEIVH 118
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
T+ +LI+ CR ++ A+ +L M++ G+ S +++ C ++ A ALV
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
M ++G+ P + FT +I L + +A+ ++++M Q G +P++V Y +V++G+
Sbjct: 179 --DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
GD L ++M + DV +N I+ LCK VD+A+ + M G +PNVV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T ++L+ LC G S A ++ +M K + NL T+ ++D V + + EA L ++M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+K+ P T+++++ C +++A ++ + +V+K P + L+
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 183/419 (43%), Gaps = 10/419 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVE--KFETPEFIFVYLI 128
L+D C P Y ++ L D L+ L ++E K E IF +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRG---DTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 129 RFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
+ DA++LF + P V Q+L KI
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD-ASQLLSDMIEKKI 326
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
TF LI A + + A K+ + MI+ D + +++ C + + A+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ + M P V+ + +I+ K +R D + +M G+ D V YT ++ G
Sbjct: 387 MFEF--MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ +GD ++F +M+ G+ PD+ TY++ ++GLC K+++A+++ D M K K +
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ T++ +C+AG + + + LKGV+ N+ TY M+ GL K + EA LL+
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR--AWEALLLHSG 485
+M + P S T++ +I + G + EL++++ + F A A +LH G
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ WG F G D+ +++R + + + DA+ + M + P +V + +LS
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLS 93
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
I + + L ++M L ++ +YTYN+ IN C+++++ A+ ++ M+KLG +P
Sbjct: 94 AIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEP 153
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
++VT ++LL C +S A ++ +M G + T+ ++ GL + EA L+
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+ M+++ P T+ ++ +C++G + AL L+ K+ A
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 37/332 (11%)
Query: 185 HMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVT 244
MK R + T LI+ LC RV A+ +++ M+E GF D +++ LC+ +
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-- 225
Query: 245 SAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTI 304
SA AL ++ M + V+ ++ +I L K+ DAL + N+M+ GIK DVV Y+
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 305 VLSGI-----------------------------------VAEGDYVKLDELFDEMLVLG 329
++ G+ V EG ++ EL++EM+ G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 389
+ PD TYN I+G CK+N + EA Q+ D M+ GC+P++VT + L+ + C+A +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
+ +E+ KG+ N TY ++ G ++ A L +EM+ + P T+ ++ +
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 450 CQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C G +N+ALE+ +K+ G + ++
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K + I+ + ++I +LC+ D A+ + N M G D S +I LC N
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC--N 292
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
D + + +M P V+ F+ +I VKE + ++A + N+M GI PD +
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y ++ G E + +++FD M+ G PD+ TY++ IN CK +VD+ +++ +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
G PN +T NTL+ C++G L+ AK + +EM +GV ++ TY I+LDGL E+
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+A + E+M K ++ II MC +++A L + K P + ++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF L++ C RV AV +++ M+E D S +I+ LC + V+ EALV+
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS--EALVLID 199
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + GF P + + ++ L K AL + +M++ IK VV Y+IV+ + +G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ LF+EM + G+ DV TY+ I GLC K D+ +++ MI P+VVT +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ + G L +AK + EM +G+ + TY ++DG + + EA+ + + M+ K
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
P T+ +I C+ +++ + L ++I +K P + L+L
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L SA+ R ++ D + M +G D +++I+ C + + A V G
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA--FSVLGR 130
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
KLG+ P + F+ ++ E R +A+ ++++M + +PD+V + +++G+ +G
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ L D M+ G PD TY +N LCK A+ + M + K +VV +
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
++ +LC+ G A + EM +KG++ ++ TY ++ GL + + + +L EM+ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF +I ++G + EA EL +++ + AP + +L+
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI C+ + A ++ + M+ G D S++I+S C+ V + + ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--DGMRLFR 409
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ G P + + ++ + + A + +M G+ P VV Y I+L G+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ K E+F++M + + YN+ I+G+C +KVD+A + S+ G KP+VVT N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++G LC+ G LS+A + ++M G + TY I++ +G + + + L+EEM
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELM 462
F SST +I + + L L+++
Sbjct: 590 GFSADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 35/200 (17%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
DA+ + M Q P + + + S + Y + M + G+ D+YT + I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
N C++ K+ A ++ KLG +P+ +T +TL+ C G
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG------------------ 154
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
+ EA L++ M++ P T +I +C KG ++EAL L
Sbjct: 155 -----------------RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 462 MKKIVAKSFAPGARAWEALL 481
+ ++V F P + +L
Sbjct: 198 IDRMVEYGFQPDEVTYGPVL 217
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
KV++AI + +SMI+ P + N L A+ G K M L G+E +++T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
IM++ K ++ A +L K + P + TF ++ C +G ++EA+ L+ ++V
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 469 SFAP 472
P
Sbjct: 170 KQRP 173
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 2/288 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I LC+ ++VD A+ +LN M +DG G D + +IS LC + A +V
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC-- 246
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K P V F +I VKE R +A +M + + PD+V Y++++ G+
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +E+F M+ G PDV TY++ ING CK KV+ +++ M + G N VT
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C AG L+ A+ + + M GV N+ TY ++L GL +I +A ++L +M K
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
T++ II MC+ G + +A ++ + + P + ++L
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 167/346 (48%), Gaps = 3/346 (0%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ D++DLFF + + R P++ ++ + + Q + I T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI-YLWEQMQMLGIPHNLCTC 119
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+L++ CR ++ A+ L MI+ G +++ C + V +AL ++ M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY--DALYMFDQM 177
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
+G+ P V+ + +I L K ++ +AL +LN+M++DGI PDVV Y ++SG+ + G +
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+ M + PDV+T+N I+ K+ +V EA + + MI+ P++VT + L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC L +A+ + M KG ++ TY I+++G ++ L EM ++
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ +I C+ G +N A E+ +++V P + LL
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI A + RV A + MI D SL+I LC + + AE + +G
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM--FG 315
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P V+ ++ +I K ++ + + +M Q G+ + V YTI++ G G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+E+F M+ G+ P++ TYNV ++GLC K+++A+ I+ M K G ++VT N
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ +C+AG+++ A + + +G+ ++ TY M+ GL K EA L +M +
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 434 CFYP 437
P
Sbjct: 496 GILP 499
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%)
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
D+ +M+R ++ + D+L + M Q P + ++ +LS I Y + L+++M
Sbjct: 48 DYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
+LG+ ++ T N+ +N C+ +++ A+ + MIKLG +P++VT +LL C +
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
A + +M G + N+ Y ++DGL ++ A LL M K P T++++
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 446 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
I +C G ++A ++ + + P + AL+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LI+ C+ ++V++ +K+ M + G + +++I C + AE +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI---- 383
Query: 254 DMRKLGFC---PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
R++ FC P ++ + ++ L + AL IL M+++G+ D+V Y I++ G+
Sbjct: 384 -FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G+ +++ + GL+PD++TY + GL K+ EA + M + G PN
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 315 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
++KLD+ LF M+ +P + ++ ++ + K K D I + + M LG N+ T
Sbjct: 59 FMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
CN LL C LS A + +M G E ++ T+ +L+G + +A + ++M+
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYS 491
+ P ++ II +C+ ++ AL+L+ ++ P + +L+ S +S
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 492 ETT 494
+ T
Sbjct: 239 DAT 241
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 156/300 (52%), Gaps = 2/300 (0%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K Q + I T+ +LI+ CR ++ A+ +L M++ G+ S +++ C
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
++ A ALV M ++G+ P + FT +I L + +A+ ++++M Q G +P++V
Sbjct: 95 RISDAVALV--DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y +V++G+ GD L ++M + DV +N I+ LCK VD+A+ + M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
G +PNVVT ++L+ LC G S A ++ +M K + NL T+ ++D V + +
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
EA L ++M+K+ P T++++I C +++A ++ + +V+K P + L+
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 142/268 (52%), Gaps = 2/268 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+++ LC+ +D A +LN M D I + II SLC+ V +AL ++
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNLFK 209
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ ++ +I L R DA +L+ M + I P++V + ++ V EG
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+V+ ++L D+M+ + PD++TYN ING C +++D+A Q+ + M+ C P++ T N
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C++ + + +EM +G+ + TY ++ GL + A + ++M+
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALEL 461
P T+ ++ +C G + +ALE+
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 150/287 (52%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L+SA+ ++++ D + + M G + +++I+ C ++ ++ A AL+ G
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL--GK 70
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M KLG+ P ++ + ++ +R DA+ +++QM + G +PD + +T ++ G+
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ L D M+ G P++ TY V +NGLCK+ +D A +++ M + +VV NT
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
++ +LC+ + A + KEM KG+ N+ TY ++ L +AS LL +M++K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF+ +I ++G EA +L ++ +S P + +L+
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 182/419 (43%), Gaps = 10/419 (2%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVE--KFETPEFIFVYLI 128
L+D C P Y ++ L DI + L ++E K E IF +I
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 129 RFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
+ DA++LF + P V Q+L KI
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD-ASQLLSDMIEKKI 251
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
TF LI A + + A K+ + MI+ D + +I+ C + + A+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ + M P + + +I+ K +R D + +M G+ D V YT ++ G
Sbjct: 312 MFEF--MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ +GD ++F +M+ G+ PD+ TY++ ++GLC K+++A+++ D M K K +
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ T++ +C+AG + + + LKGV+ N+ TY M+ GL K + EA LL+
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR--AWEALLLHSG 485
+M + P S T++ +I + G + EL++++ + F A A +LH G
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 94/171 (54%)
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
P + + +LS I + + L ++M LG+ ++YTYN+ IN C+++++ A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ M+KLG +P++VT ++LL C +S A ++ +M G + T+ ++ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+ EA L++ M+++ P T+ ++ +C++G I+ A L+ K+ A
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 153/288 (53%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +++ LC+ D A+ +LN M + I S +I SLC+ +AL ++
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH--EDDALNLFT 277
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P V+ ++ +I L R DA +L+ M + I P++V ++ ++ V +G
Sbjct: 278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
VK ++L++EM+ + P+++TY+ ING C +++ EA Q+++ MI+ C PNVVT N
Sbjct: 338 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+A + K + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P T++ ++ +C+ G + +A+ + + + + P + ++
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 190/399 (47%), Gaps = 5/399 (1%)
Query: 84 TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD-RIQDAVD 142
+ +A F+ ++LV + P R + + ++R GL+D + DA+
Sbjct: 6 SSSAKRFVHRSLVVRGNAATFPLSFSFCRRRAFSGKTSYDYREVLR-TGLSDIELDDAIG 64
Query: 143 LFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISAL 202
LF + + R P++ +V K + + I T+ +LI+
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD-LVISFGEKMEILGISHNLYTYNILINCF 123
Query: 203 CRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCP 262
CR R+ A+ +L M++ G+ D + +++ C N ++ A ALV M ++G+ P
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV--DQMVEMGYKP 181
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ FT +I L + +A+ ++++M Q G +PD+V Y V++G+ GD L
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
++M + +V Y+ I+ LCK D+A+ + M G +PNV+T ++L+ LC
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
G S A ++ +M + + NL T+ ++D V K ++ +A L EEM+K+ P T+
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++I C + EA ++++ ++ K P + L+
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ C + R+ A ++L MI + + +I+ C+ V + + ++
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD--KGMELFR 417
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G + +T +I + +A + QM G+ P+++ Y I+L G+ G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
K +F+ + + PD+YTYN+ I G+CK K
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI L + +R+D A L M+E+G + IS E ++ SA+ V +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV--KE 547
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
MR+ G P + T +I K+ + ++A M GI D YT++++G+
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+E+F EM G+ PDV++Y V ING K + +A I D M++ G PNV+ N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
LLG C +G++ KAK ++ EM +KG+ N TY ++DG ++ EA L +EM K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELM---KKIVAKSFAP 472
P S + ++ C+ + A+ + KK A S AP
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 37/339 (10%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L++ + I I T+ ++ +C +D A I+ MI G + I + +I +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
+ + +A+ V +M++ G P + + +I L K +R +A L +M ++G+KP
Sbjct: 463 LQNSRF--GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP------------------------- 332
+ Y +SG + ++ D+ EM G++P
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 333 ----------DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
D TY V +NGL K +KVD+A +I M G P+V + L+ +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
G++ KA + EM +G+ N+ Y ++L G EI +A LL+EM K +P + T+
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
II C+ G + EA L ++ K P + + L+
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 37/323 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VLI LC+I+R++ A +L M G LD SL+I L + + +A+ LV
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ P + D I + KE A + + M G+ P Y ++ G E
Sbjct: 339 VSHGINIKPYMYDCC--ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + EL EM ++ YTY + G+C +D A IV MI GC+PNVV
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ + A V+KEM +G+ ++ Y ++ GL + EA L EM++
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 434 CFYPRSSTF------------------------------DNIICC-----MCQKGLINEA 458
P + T+ + ++C C+KG + EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
+ +V + A+ + L+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLM 599
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 42/318 (13%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ T+ VL++ L + +VD A +I M G D ++I+ + ++ A +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS-- 648
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ +M + G P V+ + ++ + A +L++M G+ P+ V Y ++ G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC----- 365
GD + LFDEM + GL+PD + Y ++G C+ N V+ AI I + K GC
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTA 767
Query: 366 ----------------------------------KPNVVTCNTLLGALCEAGDLSKAKGV 391
KPN VT N ++ LC+ G+L AK +
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+M + + TY +L+G E + +E + P + II +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 452 KGLINEALELMKKIVAKS 469
+G+ +AL L+ ++ AK+
Sbjct: 888 EGMTTKALVLVDQMFAKN 905
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 162/433 (37%), Gaps = 46/433 (10%)
Query: 80 SCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGL--ADRI 137
C P Y LIKT + S D VL ++ E+ P+ IF Y GL A R+
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK--EQGIAPD-IFCYNSLIIGLSKAKRM 503
Query: 138 QDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRV 197
+A + P + + + + + +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS-ADKYVKEMRECGVLPNKVLCTG 562
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
LI+ C+ +V A M++ G D K +++++ L + + V AE ++ +MR
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE--IFREMRG 620
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G P V + +I K A I ++M ++G+ P+V+ Y ++L G G+ K
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
EL DEM V GL P+ TY I+G CK + EA ++ D M G P+ TL+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 378 ALCEAGDLSKA--------KGVMKEMG----------------LKGVELNLH-------- 405
C D+ +A KG LK LN
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 406 ------TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
TY IM+D L + + A L +M P T+ +++ + G E
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 460 ELMKKIVAKSFAP 472
+ + +A P
Sbjct: 861 PVFDEAIAAGIEP 873
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 145/343 (42%), Gaps = 45/343 (13%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+L++ + + ++ T+ +LI L + R D A +++ M+ G + + I +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEE------------------- 278
++ + A+AL + M G P + +I +E+
Sbjct: 358 SKEGVMEKAKAL--FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 279 ---------RGM------DALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+GM D Y I+ +M G +P+VV YT ++ + + +
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
EM G+ PD++ YN I GL K ++DEA + M++ G KPN T + EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG----KAEIGEASLLLEEMLKKCFYPR 438
+ + A +KEM GV N +++ GL+ K ++ EA M+ +
Sbjct: 536 SEFASADKYVKEMRECGVLPN----KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ ++ + + +++A E+ +++ K AP ++ L+
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I C+ + A ++ + M G D + + ++ C NDV A+ ++G
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE--RAITIFG 756
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-----KPDVVCYTIVLSG 308
+K G F +I ++ K + +LN++ DG KP+ V Y I++
Sbjct: 757 TNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDY 814
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ EG+ ELF +M L+P V TY +NG K + E + D I G +P+
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLK-----GVELNLHTYRIMLDGLVGKAEIGEA 423
+ + ++ A + G +KA ++ +M K G +L++ T R +L G E+ A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMC 450
++E M++ + P S+T +I C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 19/309 (6%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV--------- 243
S +VL+ AL R R+D + M+E D K ++I + C +V
Sbjct: 187 SRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK 246
Query: 244 TSAE----------ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD 293
T E AL + M G P + +I L K +R DA +L +M
Sbjct: 247 TEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL 306
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G+ D Y++++ G++ + L EM+ G+ Y Y+ I + K+ +++A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+ D MI G P +L+ C ++ + ++ EM + + ++ +TY ++ G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
+ ++ A +++EM+ P + +I Q +A+ ++K++ + AP
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 474 ARAWEALLL 482
+ +L++
Sbjct: 487 IFCYNSLII 495
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 187/425 (44%), Gaps = 18/425 (4%)
Query: 84 TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY---GLADRIQDA 140
TP + +I+ L + + +L + +++ F E +F+ +I Y GLA+R A
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCSEDLFISVISVYRQVGLAER---A 130
Query: 141 VDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLIS 200
V++F+RI F C P+V M+ + + T+ VL+
Sbjct: 131 VEMFYRIKEFGCDPSV-KIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 201 ALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGF 260
ALC+ +VD A K+L M G D + +ISS+CE V L F
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-------RF 242
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
P V + +I L KE A ++ +M + GI P+V+ Y+ +++ + G
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGAL 379
+ML G P++YT + + G + +A+ + + MI+ G +PNVV NTL+
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
C G++ KA V M G N+ TY +++G + + A + +ML P
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAG 497
+ N++ +C+ EA L++ + ++ AP + A + L L ++E F
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 498 LFNQN 502
+ Q+
Sbjct: 483 MEQQH 487
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 184/435 (42%), Gaps = 50/435 (11%)
Query: 77 KSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADR 136
K + CDP+ Y ++ TL+ + +Q I V ++R + FE F + L++ ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR-DGFEPNVFTYNVLLKALCKNNK 196
Query: 137 IQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEE--ST 194
+ A L + C P ++ + + + R E S
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG--------LVKEGRELAERFEPVVSV 248
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI+ LC+ A +++ M+E G + S +I+ LC + A + +
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT--Q 306
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 313
M K G P + + +++ DAL + NQM + G++P+VV Y ++ G + G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV--- 370
+ VK +F M +G P++ TY ING K+ +D A+ I + M+ GC PNVV
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 371 --------------------------------TCNTLLGALCEAGDLSKAKGVMKEMGLK 398
T N + LC+AG L A+ V ++M +
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 399 G-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
N+ TY +LDGL I EA L E+ + SST++ ++ C GL
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 458 ALELMKKIVAKSFAP 472
AL+L+ K++ +P
Sbjct: 547 ALQLVGKMMVDGKSP 561
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 12/280 (4%)
Query: 203 CRIRRVDY-AVKILNCMIEDGFGLDGKICSL--IISSLCEQNDVTSAEALVVWGDMRKLG 259
C +R + A+ + N MI GFGL + + ++ C ++ +A+ V+ M ++G
Sbjct: 326 CFLRGTTFDALDLWNQMIR-GFGLQPNVVAYNTLVQGFCSHGNIV--KAVSVFSHMEEIG 382
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
P + + +I K A+YI N+M G P+VV YT ++ + + + +
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGA 378
L + M P V T+N +I GLC ++D A ++ M + C PN+VT N LL
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
L +A + +A G+ +E+ ++GVE + TY +L G G A L+ +M+ P
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
T + II C++G A +++ + + G R W
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLV-----SCGRRKWR 597
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
++ ALCR + A ++ M ++ + I LC+ + AE V+ M +
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK--VFRQMEQ 485
Query: 258 LGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
CP ++ + +++ L K R +A + ++ G++ Y +L G G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD--SMIKLGCKPNVVTCNT 374
+L +M+V G PD T N+ I CKQ K + A Q++D S + +P+V++
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
++ LC + +++ M G+ ++ T+ ++++ +
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 2/304 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L K + KI+++ + ++I LC+ +D A + N M GF D I + +I
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C L+ DM K P V+ F+ +I VKE + +A + +M Q GI P
Sbjct: 293 CYAGRWDDGAKLLR--DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D V YT ++ G E K + + D M+ G P++ T+N+ ING CK N +D+ +++
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M G + VT NTL+ CE G L AK + +EM + V ++ +Y+I+LDGL
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
E +A + E++ K ++ II MC +++A +L + K P + +
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 478 EALL 481
++
Sbjct: 531 NIMI 534
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ LC RV A+++++ M+E G + +++ LC V+ +A+++
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS--DAVLLID 201
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + GF P + + +++ + K + A+ +L +M++ IK D V Y+I++ G+ +G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
LF+EM + G D+ Y I G C + D+ +++ MIK P+VV +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ + G L +A+ + KEM +G+ + TY ++DG + ++ +A+ +L+ M+ K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF+ +I C+ LI++ LEL +K+ + + L+
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 175/372 (47%), Gaps = 5/372 (1%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRI 147
Y +I L L + + + +E ++ F+ I+ LIR + A R D L +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 148 PRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRR 207
+ + TP V ++ + I + T+ LI C+ +
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLRE-AEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 208 VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDF 267
+D A +L+ M+ G G + + +++I+ C+ N + + L ++ M G + +
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID--DGLELFRKMSLRGVVADTVTY 425
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
+I+ + + A + +M ++PD+V Y I+L G+ G+ K E+F+++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
+ D+ YN+ I+G+C +KVD+A + S+ G KP+V T N ++G LC+ G LS+
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
A + ++M G N TY I++ +G+ + +++ L+EE +K+C + ++ ++
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE-IKRCGFSVDASTVKMVV 604
Query: 448 CMCQKGLINEAL 459
M G + ++
Sbjct: 605 DMLSDGRLKKSF 616
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 106/199 (53%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A + ++ + G +PD V ++ +++G+ EG + EL D M+ +G P + T N +N
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
GLC KV +A+ ++D M++ G +PN VT +L +C++G + A ++++M + ++L
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ Y I++DGL + A L EM K F + +I C G ++ +L+
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 463 KKIVAKSFAPGARAWEALL 481
+ ++ + P A+ AL+
Sbjct: 306 RDMIKRKITPDVVAFSALI 324
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L S + R ++ D + + M G + S++I+ C ++ A G
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA--FSAMGK 132
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+ KLG+ P + F+ +I L E R +AL ++++M + G KP ++ +++G+ G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
L D M+ G P+ TY + +CK + A++++ M + K + V +
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
++ LC+ G L A + EM +KG + ++ Y ++ G + + LL +M+K+
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P F +I C ++G + EA EL K+++ + +P + +L+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 231 SLIISSLCEQNDVTSAEALVVWGDM-RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQ 289
LI + L E + +A L +G + + G + + + +R + + + DA+ + +
Sbjct: 3 GLIQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQE 62
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
M + +P ++ ++ + S + Y + +L +M + G+ ++YT ++ IN C+ K
Sbjct: 63 MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRK 122
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
+ A + +IKLG +P+ VT +TL+ LC G +S+A ++ M G + L T
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 410 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
+++GL ++ +A LL++ M++ F P T+ ++ MC+ G A+EL++K+ +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 470 FAPGARAWEALL 481
A + ++
Sbjct: 243 IKLDAVKYSIII 254
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 172/361 (47%), Gaps = 4/361 (1%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E + +LI +A RI +A+DLF ++ C PTV + ++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL-NLV 346
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+ + I+ T+ VLI +LC + + A ++L M+E G + + +I+ C++
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ A +V + RKL P + ++I+ K A+ +LN+M + + PDVV
Sbjct: 407 GMIEDAVDVVELMESRKLS--PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVV 463
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y ++ G G++ L M GL+PD +TY I+ LCK +V+EA + DS+
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ G PNVV L+ C+AG + +A ++++M K N T+ ++ GL ++
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA+LL E+M+K P ST +I + + G + A +++++ P A +
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 481 L 481
+
Sbjct: 644 I 644
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 36/336 (10%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI C+ + +D A K+ N M G + + +I LC + EA+ ++
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID--EAMDLFV 312
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ P V +T +I+ L ER +AL ++ +M++ GIKP++ YT+++ + ++
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------------- 360
+ K EL +ML GL+P+V TYN ING CK+ +++A+ +V+ M
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 361 --IKLGCK-------------------PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
IK CK P+VVT N+L+ C +G+ A ++ M +G
Sbjct: 433 ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+ + TY M+D L + EA L + + +K P + +I C+ G ++EA
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 460 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTF 495
+++K+++K+ P + + AL+ +D E T
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 154/321 (47%), Gaps = 34/321 (10%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA------- 246
T+ +++ C++ V+ A + ++ ++E G D + +I C++ D+ SA
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 247 --------------------------EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERG 280
EA+ ++ M+ P V +T +I+ L ER
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 281 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 340
+AL ++ +M++ GIKP++ YT+++ + ++ + K EL +ML GL+P+V TYN
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
ING CK+ +++A+ +V+ M PN T N L+ C++ ++ KA GV+ +M + V
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKV 458
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
++ TY ++DG A LL M + P T+ ++I +C+ + EA +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 461 LMKKIVAKSFAPGARAWEALL 481
L + K P + AL+
Sbjct: 519 LFDSLEQKGVNPNVVMYTALI 539
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 172/410 (41%), Gaps = 9/410 (2%)
Query: 76 FKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD 135
K C PT Y LIK+L + + L+ ++ +E+ I Y + L
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSE---ALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 136 --RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES 193
+ + A +L ++ P V V + L + K+
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM-ESRKLSPNTR 429
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI C+ V A+ +LN M+E D + +I C + SA L+
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL- 487
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P +T MI L K +R +A + + ++Q G+ P+VV YT ++ G G
Sbjct: 488 -MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + ++ML +P+ T+N I+GLC K+ EA + + M+K+G +P V T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ L + GD A ++M G + + HTY + + + +A ++ +M +
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
P T+ ++I G N A +++K++ P + +L+ H
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 122/231 (52%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
V+ +M + CP + + M+ K +A ++++ + G+ PD YT ++ G
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
D ++F+EM + G + Y I+GLC ++DEA+ + M C P V
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T L+ +LC + S+A ++KEM G++ N+HTY +++D L + + +A LL +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L+K P T++ +I C++G+I +A+++++ + ++ +P R + L+
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 178/431 (41%), Gaps = 25/431 (5%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFI-FVYLIR 129
L+ + P + Y LI +L + + +L + +EK P I + LI
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LEKGLMPNVITYNALIN 401
Query: 130 FYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIR 189
Y I+DAVD+ + + +P M +L K K+
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM--GVLNKMLERKVL 459
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
+ T+ LI CR D A ++L+ M + G D + +I SLC+ V EA
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV--EEAC 517
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
++ + + G P V+ +T +I K + +A +L +M P+ + + ++ G+
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
A+G + L ++M+ +GL P V T + I+ L K D A M+ G KP+
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
T T + C G L A+ +M +M GV +L TY ++ G + A +L+
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 430 MLKKCFYPRSSTFDNII------------------CCMCQKGLINEALELMKKIVAKSFA 471
M P TF ++I C M + +EL++K+V S
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 472 PGARAWEALLL 482
P A+++E L+L
Sbjct: 758 PNAKSYEKLIL 768
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ L+++L R VD ++ M+ED + + +++ C+ +V A V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV--SK 243
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+ + G P +T +I + + A + N+M G + + V YT ++ G+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +LF +M P V TY V I LC + EA+ +V M + G KPN+ T
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ +LC KA+ ++ +M KG+ N+ TY +++G + I +A ++E M +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + T++ +I C K +++A+ ++ K++ + P + +L+
Sbjct: 424 LSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 282 DALYILN---QMKQD-----GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 333
DALY+L+ +M +D K + CY +L+ + G ++ +++ EML + P+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
+YTYN +NG CK V+EA Q V +++ G P+ T +L+ C+ DL A V
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 394 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
EM LKG N Y ++ GL I EA L +M +P T+ +I +C
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 454 LINEALELMKKIVAKSFAPGARAWEALL 481
+EAL L+K++ P + L+
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLI 365
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 147/345 (42%), Gaps = 56/345 (16%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
++ T+ +I +LC+ +RV+ A + + + + G + + + +I C+ V EA +
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD--EAHL 553
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ M P + F +I L + + +A + +M + G++P V TI++ ++
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+GD+ F +ML G PD +TY +I C++ ++ +A ++ M + G P++
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV----GKAEIGEASL- 425
T ++L+ + G + A V+K M G E + HT+ ++ L+ GK + E L
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 426 -------------LLEEMLKKCFYPRSSTFDNII-------------------------- 446
LLE+M++ P + +++ +I
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 447 ----------CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C C+ NEA +++ ++ P + + L+
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 159/406 (39%), Gaps = 61/406 (15%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFI-FVYLIRFYGLADRIQDAV 141
P Y +I +L + +++ + D LE +K P + + LI Y A ++ +A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLE--QKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 142 DLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEE--STFRVLI 199
+ ++ C P + LL+ + +KI ++ ST +LI
Sbjct: 553 LMLEKMLSKNCLPN---SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 200 SALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV-------- 251
L + D+A M+ G D + I + C + + AE ++
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 252 ------------WGD-------------MRKLGFCPGVMDFTDMIRFLVKEERGMD---- 282
+GD MR G P F +I+ L++ + G
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 283 --------------ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV- 327
+ +L +M + + P+ Y ++ GI G+ +++FD M
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
G+ P +N ++ CK K +EA ++VD MI +G P + +C L+ L + G+ +
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
V + + G + ++I++DG VGK + EA L +++K
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDG-VGKQGLVEAFYELFNVMEK 894
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 131/310 (42%), Gaps = 27/310 (8%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI LC ++ A + M++ G +++I L + D A + +
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR--FQ 626
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P +T I+ +E R +DA ++ +M+++G+ PD+ Y+ ++ G G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---G 683
Query: 314 DYVKLDELFD---EMLVLGLIPDVYTYNVYINGLCKQN------------------KVDE 352
D + + FD M G P +T+ I L + + D
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIML 411
+++++ M++ PN + L+ +CE G+L A+ V M +G+ + + +L
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
+ EA+ ++++M+ P+ + +IC + +KG + + ++ +
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 472 PGARAWEALL 481
AW+ ++
Sbjct: 864 EDELAWKIII 873
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 24/291 (8%)
Query: 78 SYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADR 136
S P + Y I+T L D ++ + E +P+ F + LI+ YG +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR--ENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 137 IQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFR 196
A D+ R+ C P+ + + LL+ ++ K + E
Sbjct: 688 TNFAFDVLKRMRDTGCEPS--------------QHTFLSLIKHLLEMKYGKQKGSEPE-- 731
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM- 255
+ A+ + D V++L M+E + K +I +CE ++ AE V+ M
Sbjct: 732 --LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK--VFDHMQ 787
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
R G P + F ++ K ++ +A +++ M G P + +++ G+ +G+
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ +F +L G D + + I+G+ KQ V+ ++ + M K GCK
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I+ LC++ + A+ +L+ M E I + II LC+ A+ L + +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL--FTE 101
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G P V+ ++ MI + R DA +L M + I PDVV ++ +++ +V EG
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +E++ +ML G+ P TYN I+G CKQ+++++A +++DSM C P+VVT +T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+A + + EM +G+ N TY ++ G ++ A LL M+
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P TF +++ +C K + +A +++ +
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF L++ LC RV A+ +++ M+E+G G I I+ LC+ D SA L +
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTI----INGLCKMGDTESA--LNLLS 65
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + V+ + +I L K+ + A + +M GI PDV+ Y+ ++ G
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++L +M+ + PDV T++ IN L K+ KV EA +I M++ G P +T N
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+++ C+ L+ AK ++ M K ++ T+ +++G + + EM ++
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ T+ +I CQ G ++ A +L+ +++ AP ++++L
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 187/407 (45%), Gaps = 13/407 (3%)
Query: 86 NAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFF 145
+++ +++ LV+ + + ++ + ++E E I + + R YG R D++ +F
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRM-KIENCVVSEDILLSICRGYGRVHRPFDSLRVFH 110
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
++ F C P+ + + + + + ++ VLI ALCR
Sbjct: 111 KMKDFDCDPS-QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 206 R-RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGV 264
VD +KI M + G D +IS LC + A+ L + +M + P V
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKL--FTEMVEKDCAPTV 227
Query: 265 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
+ +T +I L + +A+ L +MK GI+P+V Y+ ++ G+ +G ++ ELF+
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
M+ G P++ TY I GLCK+ K+ EA++++D M G KP+ ++ C
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRI-------MLDGLVGKAEIGEASLLLEEMLKKCFYP 437
+A + EM L G+ N T+ I ++ GL +L L M +
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL-SMRSRGISV 406
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 484
T ++++ C+C+KG +A++L+ +IV P W+ L+ H+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHT 453
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 184 QHMKIRI--EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICS--LIISSLCE 239
+H++ + + TF +LI LC + + + A+++L M GFG + I + +I C+
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM--SGFGCEPDIVTYNTLIQGFCK 253
Query: 240 QNDVTSAEALVVWGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
N++ A + + D++ C P V+ +T MI K + +A +L+ M + GI P
Sbjct: 254 SNELNKASEM--FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
V + +++ G G+ + +E+ +M+ G PDV T+ I+G C+ +V + ++ +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M G PN T + L+ ALC L KA+ ++ ++ K + Y ++DG
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
++ EA++++EEM KK P TF +I C KG + EA+ + K+VA +P
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 479 ALL 481
+LL
Sbjct: 492 SLL 494
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE-ALVVWGDMR 256
L++ L ++ RV+ A+K+ + + D K +++I LC V AE AL + G M
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC---GVGKAEKALELLGVMS 233
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDY 315
G P ++ + +I+ K A + +K + PDVV YT ++SG G
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+ L D+ML LG+ P T+NV ++G K ++ A +I MI GC P+VVT +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ C G +S+ + +EM +G+ N TY I+++ L + + +A LL ++ K
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
P+ ++ +I C+ G +NEA +++++ K P + L++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 186 MKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTS 245
+ IR T+ +L +LC+ D A ++ CM DG + ++ ++SS E+ +
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
A AL++ G C M ++ LVK +R DA+ + ++ + D + I+
Sbjct: 157 ATALLLQ-SFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG- 364
+ G+ G K EL M G PD+ TYN I G CK N++++A ++ +K G
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGS 271
Query: 365 -CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
C P+VVT +++ C+AG + +A ++ +M G+ T+ +++DG E+ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +M+ +P TF ++I C+ G +++ L +++ A+ P A + L+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 184 QHMKIRI--EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICS--LIISSLCE 239
+H++ + + TF +LI LC + + + A+++L M GFG + I + +I C+
Sbjct: 196 EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM--SGFGCEPDIVTYNTLIQGFCK 253
Query: 240 QNDVTSAEALVVWGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
N++ A + + D++ C P V+ +T MI K + +A +L+ M + GI P
Sbjct: 254 SNELNKASEM--FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
V + +++ G G+ + +E+ +M+ G PDV T+ I+G C+ +V + ++ +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M G PN T + L+ ALC L KA+ ++ ++ K + Y ++DG
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
++ EA++++EEM KK P TF +I C KG + EA+ + K+VA +P
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 479 ALL 481
+LL
Sbjct: 492 SLL 494
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE-ALVVWGDMR 256
L++ L ++ RV+ A+K+ + + D K +++I LC V AE AL + G M
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC---GVGKAEKALELLGVMS 233
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDY 315
G P ++ + +I+ K A + +K + PDVV YT ++SG G
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+ L D+ML LG+ P T+NV ++G K ++ A +I MI GC P+VVT +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ C G +S+ + +EM +G+ N TY I+++ L + + +A LL ++ K
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
P+ ++ +I C+ G +NEA +++++ K P + L++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 186 MKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTS 245
+ IR T+ +L +LC+ D A ++ CM DG + ++ ++SS E+ +
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
A AL++ G C M ++ LVK +R DA+ + ++ + D + I+
Sbjct: 157 ATALLLQ-SFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG- 364
+ G+ G K EL M G PD+ TYN I G CK N++++A ++ +K G
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGS 271
Query: 365 -CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
C P+VVT +++ C+AG + +A ++ +M G+ T+ +++DG E+ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +M+ +P TF ++I C+ G +++ L +++ A+ P A + L+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 182/399 (45%), Gaps = 5/399 (1%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVD 142
P N + +L+ +V +S + E K + F LI+ A I+ + D
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFN--ENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 143 LFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISAL 202
L + F +P V + + + + E T+ VLI+ L
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK-AKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 203 CRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCP 262
+ ++ M EDG + + +++ LC+ D + +A V+ +MR+ G
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK--DGRTKDAFQVFDEMRERGVSC 301
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
++ + +I L +E + +A +++QMK DGI P+++ Y ++ G G K L
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
++ GL P + TYN+ ++G C++ A ++V M + G KP+ VT L+ +
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
++ KA + M G+ ++HTY +++ G K ++ EAS L + M++K P +
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +I C++G AL+L+K++ K AP ++ ++
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 133/247 (53%), Gaps = 2/247 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI LCR +++ A K+++ M DG + + +I C + +AL +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL--GKALSLCR 362
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
D++ G P ++ + ++ ++ A ++ +M++ GIKP V YTI++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ K +L M LGL+PDV+TY+V I+G C + +++EA ++ SM++ C+PN V N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T++ C+ G +A ++KEM K + N+ +YR M++ L + + EA L+E+M+
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 434 CFYPRSS 440
P +S
Sbjct: 543 GIDPSTS 549
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
++ N+M +G P C+ +L+ +V + + F+E ++ DVY++ + I
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIK 171
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
G C+ +++++ ++ + + G PNVV TL+ C+ G++ KAK + EMG G+
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
N TY ++++GL + + E+M + +P T++ ++ +C+ G +A ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 463 KKIVAKSFAPGARAWEALL 481
++ + + + L+
Sbjct: 292 DEMRERGVSCNIVTYNTLI 310
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 202/474 (42%), Gaps = 27/474 (5%)
Query: 3 RHPLSKTANKYLRKFRKWPHSPYKTSWHHNFGEQQAMNILIKQAATIETCXXXXXXXXXX 62
RHPL + + + ++SW N + M L++ + C
Sbjct: 140 RHPLVREVGRLI---------GLRSSW--NPKHEGQMRNLLRSLKPSQVCAVLRSQDDER 188
Query: 63 XXXPFLLSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEF 122
F D Y DP YY +++ L T Q VL ++R + TPE
Sbjct: 189 VALKFFY--WADRQWRYRHDPM--VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPE- 243
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
F ++ Y A +++DA+ + + R P + + + L +
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL-RFLER 302
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
Q + I T+ +I C + RV+ A+++L M G D I+ LC++
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 243 VTSAEALVVWGDMRKL----GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ L M+K+ G P + + +I L K + +AL+ L ++ G + D
Sbjct: 363 IVEVRDL-----MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID 417
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIV 357
+ Y+ ++ + EG + +L +EML G P DV TY +NG C+ +VD+A +++
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M G KPN V+ LL +C G +A+ +M N TY +++ GL +
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
++ EA ++ EM+ K F+P + ++ +C+ G +EA + M++ + K A
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 146/290 (50%), Gaps = 3/290 (1%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGF-GLDGKICSLIISSLC 238
L +Q RI++ + ++ ALC+ R+ A ++N M+ G D + +++ C
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+V A+ L+ M G P + +T ++ + + + ++A ++N ++ P+
Sbjct: 466 RLGEVDKAKKLLQV--MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+ Y++++ G+ EG + ++ EM++ G P N+ + LC+ + EA + ++
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 583
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
+ GC NVV T++ C+ +L A V+ +M L ++ TY ++D L K
Sbjct: 584 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG 643
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
I EA+ L+++ML K P T+ +I CQ G +++ + +++K++++
Sbjct: 644 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
++ T+ LI L + D A+ L E GF +D S I+ +LC++ ++ A+ L+
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441
Query: 251 VWGDMRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+M G CP V+ +T ++ + A +L M G KP+ V YT +L+G+
Sbjct: 442 --NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G ++ E+ + P+ TY+V ++GL ++ K+ EA +V M+ G P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
V N LL +LC G +A+ M+E KG +N+ + ++ G E+ A +L++
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
M + T+ ++ + +KG I EA ELMKK++ K P
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 40/322 (12%)
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
R E+ RV++S R ++ A+K+L M G + IC+ I N + +A
Sbjct: 240 RTPEAFSRVMVS-YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRL--EKA 296
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
L M+ +G P V+ + MIR R +A+ +L M G PD V Y ++
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 309 IVAEGDYVKLDELFDEMLV-LGLIPDVYTYNVYIN------------------------- 342
+ E V++ +L +M GL+PD TYN I+
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 343 ----------GLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGV 391
LCK+ ++ EA +++ M+ G C P+VVT ++ C G++ KAK +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
++ M G + N +Y +L+G+ + EA ++ + + P S T+ I+ + +
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 452 KGLINEALELMKKIVAKSFAPG 473
+G ++EA ++++++V K F PG
Sbjct: 537 EGKLSEACDVVREMVLKGFFPG 558
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
+L+ +LCR R A K + + G ++ + +I C QND A AL V DM
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC-QNDELDA-ALSVLDDMY 621
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
+ V +T ++ L K+ R +A ++ +M GI P V Y V+ G
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
L + ++M+ +Y N I LC K++EA ++ +++ + + TC L+
Sbjct: 682 DLVAILEKMISRQKCRTIY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Query: 377 GALCEAG 383
+ G
Sbjct: 740 EGYLKKG 746
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 154/337 (45%), Gaps = 37/337 (10%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
+LK + I + T L++ C + AV + M + G D + +++I +LC+
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
V A L V M+ G P V+ ++ +I L K R DA L++M I P+V
Sbjct: 61 NRLVVPA--LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
+ ++ ++ G K+D ++ M+ + + P+V+TY+ I GLC N+VDEAI+++D
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 360 MIKLGCKPNVVT-----------------------------------CNTLLGALCEAGD 384
MI GC PNVVT CNTL+ +AG
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ A GV M G+ N+ +Y I+L GL E+ +A E M K T+
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I MC+ ++ EA +L K+ K P +A+ ++
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 171/382 (44%), Gaps = 80/382 (20%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ ++I+ LCR R A+ ++ M++ G+ D S +I+ C+ N V A LV
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV--S 163
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI---- 309
M ++GF P V+ + +I K DA+ + ++M++DG++ D V Y +++G+
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 310 -------------------------------VAEGDYVKLDELFDEMLVLGLIPDVYTYN 338
V EG + + +L++EM + PDV+TYN
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 339 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
INGLC +VDEA Q++D M+ GC P+VVT NTL+ C++ + + + +EM +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 399 GV--------------------------------ELNLHTYRIMLDGLVGKAEIGEASLL 426
G+ N+ TY I+L GL + +A +L
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG- 485
E M K +T++ +I MC+ G + +A +L + + K P ++ ++ SG
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI--SGF 461
Query: 486 --------SDLTYSETTFAGLF 499
SDL Y + GL
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLL 483
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F ++S + + + D + + + M G G D +++I+ LC + A L V G
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA--LSVVGK 129
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K G+ P V+ + +I + R DA+ ++++M++ G +PDVV Y ++ G G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
ELFD M G+ D TYN + GLC + +A +++ M+ PNV+T
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
++ + G S+A + +EM + V+ ++ TY +++GL + EA +L+ M+ K
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T++ +I C+ ++E +L +++ + + ++
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 141/323 (43%), Gaps = 34/323 (10%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K + M R + + +I C+I V+ AV++ + M DG D + +++ LC
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
+ A L+ DM P V+ FT +I VKE + +A+ + +M + + PDV
Sbjct: 224 RWSDAARLM--RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y +++G+ G + ++ D M+ G +PDV TYN ING CK +VDE ++ M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 362 KLG--------------------------------CKPNVVTCNTLLGALCEAGDLSKAK 389
+ G +PN+ T + LL LC + KA
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
+ + M +EL++ TY I++ G+ + +A L + K P ++ +I
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 450 CQKGLINEALELMKKIVAKSFAP 472
C+K +++ L +K+ P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%)
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
+M Q P +V ++ VLS I +Y + LF M V G+ D+Y+YN+ IN LC+ +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+ A+ +V M+K G +P+VVT ++L+ C+ + A ++ +M G ++ Y
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
++DG + +A L + M + + T+++++ +C G ++A LM+ +V +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 469 SFAPGARAWEALL 481
P + A++
Sbjct: 239 DIVPNVITFTAVI 251
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 148/285 (51%), Gaps = 4/285 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
IE F VL+ V AV++L+ M + G D + ++ +LC+ V EA
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVK--EAS 222
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
V+ DMR+ F P + FT ++ +E + M+A +L QMK+ G++PD+V +T +LSG
Sbjct: 223 KVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK-QNKVDEAIQIVDSMIKLGCKPN 368
G +L ++M G P+V Y V I LC+ + ++DEA+++ M + GC+ +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+VT L+ C+ G + K V+ +M KGV + TY ++ K + E L+E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
+M ++ +P ++ +I C+ G + EA+ L ++ A +PG
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 170/366 (46%), Gaps = 13/366 (3%)
Query: 89 YFLIKTLVNT-SHLQDIPPVLDHLERVEKFETPEFI----FVYLIRFYGLADRIQDAVDL 143
Y + K++V S ++ V +E + K PE I FV L+R + A+ ++ AV++
Sbjct: 131 YEVCKSMVMILSKMRQFGAVWGLIEEMRK-TNPELIEPELFVVLMRRFASANMVKKAVEV 189
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
+P++ P + + K F L+ C
Sbjct: 190 LDEMPKYGLEPDEYVFGCLLDALCKNGSVKE--ASKVFEDMREKFPPNLRYFTSLLYGWC 247
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
R ++ A ++L M E G D + + ++S + A L+ DMRK GF P
Sbjct: 248 REGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM--NDMRKRGFEPN 305
Query: 264 VMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
V +T +I+ L + E+ MD A+ + +M++ G + D+V YT ++SG G K +
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
D+M G++P TY + K+ + +E +++++ M + GC P+++ N ++ C+
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY--PRSS 440
G++ +A + EM G+ + T+ IM++G + + EA +EM+ + + P+
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYG 485
Query: 441 TFDNII 446
T +++
Sbjct: 486 TLKSLL 491
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 327 VLGLIPDVYTYN----------VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
V GLI ++ N V + N V +A++++D M K G +P+ LL
Sbjct: 150 VWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLL 209
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
ALC+ G + +A V ++M K NL + +L G + ++ EA +L +M +
Sbjct: 210 DALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLE 268
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P F N++ G + +A +LM + + F P + L+
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ C+ V A +I+ + +GF D +I LC + + + AL ++
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE--TNRALALFN 380
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G P V+ + +I+ L + ++A + N+M + G+ P+V + I+++G+ G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D L M+ G PD++T+N+ I+G Q K++ A++I+D M+ G P+V T N
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+LL LC+ K M KG NL T+ I+L+ L ++ EA LLEEM K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD---LTY 490
P + TF +I C+ G ++ A L +K+ + +++H+ ++ +T
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 491 SETTFAGLFNQ 501
+E F + ++
Sbjct: 621 AEKLFQEMVDR 631
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 39/401 (9%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E ++V ++ YG ++Q+AV++F R+ + C PTV ++
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD-QAHKVY 134
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIE-------------------- 220
++ + I + +F + + + C+ R A+++LN M
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 221 ----DGFGLDGKI----CSLIISS-------LCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
+G+ L GK+ SL +S+ LC++ DV E L+ + K G P +
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL--DKVIKRGVLPNLF 252
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
+ I+ L + A+ ++ + + G KPDV+ Y ++ G+ + + + +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
+ GL PD YTYN I G CK V A +IV + G P+ T +L+ LC G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
++A + E KG++ N+ Y ++ GL + I EA+ L EM +K P TF+ +
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 446 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
+ +C+ G +++A L+K +++K + P + +L+H S
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN-ILIHGYS 472
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 185/404 (45%), Gaps = 6/404 (1%)
Query: 79 YSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADRI 137
Y C+PT +Y ++ LV++ + V ++ ++ TP+ + F ++ + R
Sbjct: 105 YDCEPTVFSYNAIMSVLVDSGYFDQAHKV--YMRMRDRGITPDVYSFTIRMKSFCKTSRP 162
Query: 138 QDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRV 197
A+ L + C V ++ K + + STF
Sbjct: 163 HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY-ELFGKMLASGVSLCLSTFNK 221
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ LC+ V K+L+ +I+ G + +L I LC++ ++ A +V G + +
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV--GCLIE 279
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G P V+ + ++I L K + +A L +M +G++PD Y +++G G
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+ + + + G +PD +TY I+GLC + + + A+ + + + G KPNV+ NTL+
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
L G + +A + EM KG+ + T+ I+++GL + +A L++ M+ K ++P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
TF+ +I + + ALE++ ++ P + +LL
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 5/293 (1%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
++ T+R LI LC + A+ + N + G + + + +I L Q + A L
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+M + G P V F ++ L K DA ++ M G PD+ + I++ G
Sbjct: 415 --NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+ E+ D ML G+ PDVYTYN +NGLCK +K ++ ++ +M++ GC PN+
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N LL +LC L +A G+++EM K V + T+ ++DG ++ A L +M
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 431 LKKCFYPRSS--TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ + SS T++ II +K + A +L +++V + P + ++
Sbjct: 593 -EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI L + A ++ N M E G + + +++++ LC+ V+ A+ LV
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV-- 451
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G+ P + F +I + + +AL IL+ M +G+ PDV Y +L+G+
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + E + M+ G P+++T+N+ + LC+ K+DEA+ +++ M P+ VT T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 375 LLGALCEAGDL------------------------------------SKAKGVMKEMGLK 398
L+ C+ GDL + A+ + +EM +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
+ + +TYR+M+DG + L EM++ F P +T +I C+C + + EA
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 459 LELMKKIVAKSFAPGA 474
++ ++V K P A
Sbjct: 692 AGIIHRMVQKGLVPEA 707
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 45/291 (15%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +LI +++ A++IL+ M+++G D + +++ LC+ + + + +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF--EDVMETYK 520
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P + F ++ L + + +AL +L +MK + PD V + ++ G G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 314 D-------YVKLDE-----------------------------LFDEMLVLGLIPDVYTY 337
D + K++E LF EM+ L PD YTY
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
+ ++G CK V+ + + M++ G P++ T ++ LC + +A G++ M
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC---FYPRSSTFDNI 445
KG L + D V K E+ L+LE++LKK +Y FD +
Sbjct: 701 KG--LVPEAVNTICD--VDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 157/322 (48%), Gaps = 35/322 (10%)
Query: 186 MKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
MK+ E S TF L++ C + R A+ +++ ++ G+ + I + II SLCE+ V
Sbjct: 141 MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQV 200
Query: 244 TSA-------------------EALVV-------WG-------DMRKLGFCPGVMDFTDM 270
+A +L+ WG DM ++G P V+ F+ +
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 271 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 330
I KE + ++A N+M Q + P++V Y +++G+ G + ++ + ++ G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
P+ TYN ING CK +VD+ ++I+ M + G + T NTL C+AG S A+
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
V+ M GV +++T+ I+LDGL +IG+A + LE++ K T++ II +C
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 451 QKGLINEALELMKKIVAKSFAP 472
+ + +A L + K +P
Sbjct: 441 KADKVEDAWYLFCSLALKGVSP 462
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 121/224 (54%)
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
LG + FT +I + R AL L +M + G +P +V + +++G + +
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
L D+++ LG P+V YN I+ LC++ +V+ A+ ++ M K+G +P+VVT N+L+
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
L +G + ++ +M G+ ++ T+ ++D + ++ EA EM+++ P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
T++++I +C GL++EA +++ +V+K F P A + L+
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 111/215 (51%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
AL G M KLGF P ++ F ++ R +A+ +++Q+ G +P+VV Y ++
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ +G ++ M +G+ PDV TYN I L + +I+ M+++G P
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+V+T + L+ + G L +AK EM + V N+ TY +++GL + EA +L
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
++ K F+P + T++ +I C+ +++ ++++
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 177 PQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISS 236
+IL M I + TF LI + ++ A K N MI+ + + +I+
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 237 LCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
LC + A+ V + GF P + + +I K +R D + IL M +DG+
Sbjct: 299 LCIHGLLDEAKK--VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
D Y + G G + +++ M+ G+ PD+YT+N+ ++GLC K+ +A+
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
++ + K ++T N ++ LC+A + A + + LKGV ++ TY M+ GL
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 417 KAEIGEASLLLEEMLKK 433
K EA L +M K+
Sbjct: 477 KRLWREAHELYRKMQKE 493
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
G D+ + +R + + DAL + M + P +V ++ +L I Y + L
Sbjct: 42 SGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISL 101
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
F + +LG+ D+Y++ I+ C+ ++ A+ + M+KLG +P++VT +L+ C
Sbjct: 102 FRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCH 161
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
+A ++ ++ G E N+ Y ++D L K ++ A +L+ M K P T
Sbjct: 162 VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVT 221
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++++I + G + ++ ++ +P + AL+
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 156/327 (47%), Gaps = 16/327 (4%)
Query: 84 TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDL 143
T N+Y+ L+K + + ++D + + + F T F LI G A + AV
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQ-DGFPTTARTFNLLICSCGEAGLAKQAVVQ 206
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES------TFRV 197
F + F P V Q L K +E+ T+ +
Sbjct: 207 FMKSKTFNYRP-------FKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNI 259
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ R+ ++D ++ + M DGF D ++++ L + N +A L M++
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA--LTTLNHMKE 317
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
+G P V+ +T +I L + Y L++M + G +PDVVCYT++++G V G+ K
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
E+F EM V G +P+V+TYN I GLC + EA ++ M GC PN V +TL+
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNL 404
L +AG LS+A+ V++EM KG ++L
Sbjct: 438 YLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 213 KILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIR 272
++++ M++DGF + +L+I S E + +A+V + + + P + ++
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAG--LAKQAVVQFMKSKTFNYRPFKHSYNAILN 227
Query: 273 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 332
L+ ++ ++ QM +DG PDV+ Y I+L G + D LFDEM G P
Sbjct: 228 SLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSP 287
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
D YTYN+ ++ L K NK A+ ++ M ++G P+V+ TL+ L AG+L K +
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
EM G ++ Y +M+ G V E+ +A + EM K P T++++I +C
Sbjct: 348 DEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 407
Query: 453 GLINEALELMKKIVAKSFAPGARAWEALL 481
G EA L+K++ ++ P + L+
Sbjct: 408 GEFREACWLLKEMESRGCNPNFVVYSTLV 436
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 3/286 (1%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ S++++++ R ++ A + L MI+ GF D C+LI+++LCE V A+
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN--RAIW 273
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ M LGF P +++FT +I L K+ A +L +M ++G KP+V +T ++ G+
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 311 AEGDYVKLDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G K LF +++ P+V+TY I G CK++K++ A + M + G PNV
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
T TL+ C+AG +A +M MG +G N++TY +D L K+ EA LL +
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
T+ +I C++ IN+AL ++ F R
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
F LI LC+ + A ++L M+ +G+ + + +I LC++ A L +
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL-K 347
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+R + P V +T MI KE++ A + ++MK+ G+ P+V YT +++G G
Sbjct: 348 LVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + EL + M G +P++YTYN I+ LCK+++ EA ++++ G + + VT
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C+ D+++A M G E ++ I++ + ++ E+ L + ++
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++I C C++G I+ AL+ + P + + +L+
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
R ++ I R++ AV ++ M G + ++ E + AE V+ +M
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN--VFDEM 208
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
G P + M+ ++ + +A L M Q G PD T++L+ + G
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+ F +M+ LG P++ + I+GLCK+ + +A ++++ M++ G KPNV T L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 376 LGALCEAGDLSKA-KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
+ LC+ G KA + +K + + N+HTY M+ G + ++ A +L M ++
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
+P +T+ +I C+ G A ELM + + F P + A
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 125/240 (52%), Gaps = 6/240 (2%)
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
+ +A++L+ G+++K VM M+R + R +A+ ++ M+ G+ P +
Sbjct: 131 LVTADSLLANGNLQK---AHEVMRC--MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITM 185
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
VL V G + +FDEM V G++PD +Y + + G + K+ EA + + MI+
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
G P+ TC +L ALCE G +++A ++M G + NL + ++DGL K I +
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV-AKSFAPGARAWEALL 481
A +LEEM++ + P T +I +C++G +A L K+V + ++ P + +++
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA-EALVVW 252
T+ +I C+ +++ A + + M E G + + +I+ C+ A E + +
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
GD GF P + + I L K+ R +A +LN+ G++ D V YTI++ +
Sbjct: 420 GDE---GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
D + F M G D+ N+ I C+Q K+ E+ ++ ++ LG P T
Sbjct: 477 NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+++ C+ GD+ A M G + TY ++ GL K+ + EA L E M+
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596
Query: 433 KCFYP 437
+ P
Sbjct: 597 RGLSP 601
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L K+ + + T+ +LI C+ ++ A+ M + GF D ++ +++I++
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C Q + +E L + + LG P +T MI KE AL + MK+ G P
Sbjct: 509 CRQKKMKESERL--FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D Y ++SG LCK++ VDEA ++
Sbjct: 567 DSFTYGSLISG-----------------------------------LCKKSMVDEACKLY 591
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
++MI G P VT TL C+ D + A +++ + K L + T R ++ L +
Sbjct: 592 EAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSE 648
Query: 418 AEIGEASLLLEEMLKK 433
++G A+L +++L+K
Sbjct: 649 KKVGVAALFFQKLLEK 664
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I+ LC+ + + A ++ M+ G D ++ C++ DV E V+
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK--VFS 364
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DMR P ++ F+ M+ + AL N +K+ G+ PD V YTI++ G +G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
L +EML G DV TYN ++GLCK+ + EA ++ + M + P+ T
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C+ G+L A + ++M K + L++ TY +LDG +I A + +M+ K
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
P ++ ++ +C KG + EA + ++++K+ P
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 145/289 (50%), Gaps = 4/289 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +LI CR + A+ + N M++ G +D + I+ LC++ + A+ L + +
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL--FNE 470
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M + P T +I K +A+ + +MK+ I+ DVV Y +L G GD
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
E++ +M+ ++P +Y++ +N LC + + EA ++ D MI KP V+ CN+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK- 433
++ C +G+ S + +++M +G + +Y ++ G V + + +A L+++M ++
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 434 -CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+++I+ C++ + EA +++K++ + P + ++
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T ++++ALC+ +++ L+ + E G D + +IS+ + + EA +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM--EEAFELMN 294
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M GF PGV + +I L K + A + +M + G+ PD Y +L +G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D V+ +++F +M ++PD+ ++ ++ + +D+A+ +S+ + G P+ V
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C G +S A + EM +G +++ TY +L GL + +GEA L EM ++
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P S T +I C+ G + A+EL +K+ K + LL
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 9/315 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
+S F +LI + R++ A + + GF + C+ +I SL V A V
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG--V 222
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ ++ + G V M+ L K+ + L+Q+++ G+ PD+V Y ++S +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+G + EL + M G P VYTYN INGLCK K + A ++ M++ G P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
+LL C+ GD+ + + V +M + V +L + M+ + +A + +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL-------LHS 484
+ P + + +I C+KG+I+ A+ L +++ + A + +L +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 485 GSDLTYSETTFAGLF 499
+D ++E T LF
Sbjct: 463 EADKLFNEMTERALF 477
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T +LI C++ + A+++ M E LD + ++ + D+ +A+ +W
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE--IWA 539
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM P + ++ ++ L + +A + ++M IKP V+ ++ G G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI--KLGCKPNVVT 371
+ + ++M+ G +PD +YN I G ++ + +A +V M + G P+V T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N++L C + +A+ V+++M +GV + TY M++G V + + EA + +EML
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 432 KKCFYP 437
++ F P
Sbjct: 720 QRGFSP 725
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++ K + +IR++ T+ L+ ++ +D A +I M+ S+++++L
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C + + AEA VW +M P VM MI+ + D L +M +G P
Sbjct: 561 CSKGHL--AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVL--GLIPDVYTYNVYINGLCKQNKVDEAIQ 355
D + Y ++ G V E + K L +M GL+PDV+TYN ++G C+QN++ EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
++ MI+ G P+ T ++ +L++A + EM +G
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +L++ALC + A ++ + MI IC+ +I C + + E+ +
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL--E 609
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK--QDGIKPDVVCYTIVLSGIVA 311
M GF P + + +I V+EE A ++ +M+ Q G+ PDV Y +L G
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ + + + +M+ G+ PD TY ING Q+ + EA +I D M++ G P+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 168/347 (48%), Gaps = 4/347 (1%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTF 195
++ DA+ LF + + R P++ +V + + Q++ I T+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD-LVISLGEQMQNLGISHNLYTY 113
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
+ I+ CR ++ A+ IL M++ G+G + +++ C N ++ A ALV M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV--DQM 171
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
++G+ P + FT ++ L + + +A+ ++ +M G +PD+V Y V++G+ G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
L ++M + DV YN I+GLCK +D+A + + M G KP+V T N L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-KC 434
+ LC G S A ++ +M K + +L + ++D V + ++ EA L +EM+K K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P ++ +I C+ + E +E+ +++ + + L+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K + I+ + T+ LIS LC R A ++L+ M+E D + +I + ++
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 242 DVTSAEALVVWGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ AE L + +M K C P V+ + +I+ K +R + + + +M Q G+ + V
Sbjct: 335 KLVEAEKL--YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
YT ++ G D +F +M+ G+ PD+ TYN+ ++GLC V+ A+ + + M
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
K K ++VT T++ ALC+AG + + + LKGV+ N+ TY M+ G K
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA L EM + P S T++ +I + G + EL+K++ + FA A + +
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Query: 481 --LLHSG 485
+LH G
Sbjct: 573 TNMLHDG 579
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 122/240 (50%)
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
D+ +A+ ++GDM K P +++F+ ++ + K + + + QM+ GI ++
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y+I ++ + +M+ LG P + T N +NG C N++ EA+ +VD M+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
++G +P+ VT TL+ L + S+A +++ M +KG + +L TY +++GL + E
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A LL +M K ++ II +C+ +++A +L K+ K P + L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 37/322 (11%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I+ LC+ R ++ A+++ CM + G D + +IS L T A L+ D
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL--RD 244
Query: 255 MRKLGFCPGVMDFTDMIRFLVKE-----ERGM---------------------------- 281
M K P V+ FT +I VKE R +
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 282 --DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 339
DA Y+ + M G PDVV Y +++G +LF EM GL+ D +TYN
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I+G C+ K++ A ++ + M+ G P++VT N LL LC G + KA +++++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+++++ TY I++ GL ++ EA L + +K P + + +I +C+KGL EA
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 460 ELMKKIVAKSFAPGARAWEALL 481
+L +++ F P R ++ L
Sbjct: 485 KLCRRMKEDGFMPSERIYDETL 506
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 139/274 (50%), Gaps = 6/274 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGL--DGKICSLIISSLCEQNDVTSAEALVV 251
T L++ C+ R AV +++ M DGFG + I + +I+ LC+ D+ +A L V
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSM--DGFGFVPNVVIYNTVINGLCKNRDLNNA--LEV 206
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ M K G + + +I L R DA +L M + I P+V+ +T ++ V
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
EG+ ++ L+ EM+ ++P+V+TYN ING C + +A + D M+ GC P+VVT
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
NTL+ C++ + + EM +G+ + TY ++ G ++ A + M+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P T++ ++ C+C G I +AL +++ +
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P ++DFT ++ + K + +Y+ ++M+ GI D+ +TI++ L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+M+ LG P + T +NG C+ N+ EA+ +VDSM G PNVV NT++ LC+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
DL+ A V M KG+ + TY ++ GL +A+ LL +M+K+ P
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
F +I ++G + EA L K+++ +S P + +L+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 2/300 (0%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K +++ I + +F +LI CR R+ A+ +L M++ GF +++ C+ N
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
A +LV M GF P V+ + +I L K +AL + M++ GI+ D V
Sbjct: 164 RFQEAVSLV--DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y ++SG+ G + L +M+ + P+V + I+ K+ + EA + MI
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ PNV T N+L+ C G L AK + M KG ++ TY ++ G +
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ L EM + + T++ +I CQ G +N A ++ ++V +P + LL
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F +++ + ++ + D + + + M G D +++I C + AL + G
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC--SRLSLALALLGK 139
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M KLGF P ++ ++ + R +A+ +++ M G P+VV Y V++G+ D
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
E+F M G+ D TYN I+GL + +A +++ M+K PNV+
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ + G+L +A+ + KEM + V N+ TY +++G +G+A + + M+ K
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P T++ +I C+ + + ++L ++ + A + L+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ ++ M LG + FT +I + R AL +L +M + G +P +V +L+G
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ + L D M G +P+V YN INGLCK ++ A+++ M K G + +
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VT NTL+ L +G + A ++++M + ++ N+ + ++D V + + EA L +
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL------- 481
EM+++ P T++++I C G + +A + +V+K P + L+
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 482 -LHSGSDLTYSETTFAGL 498
+ G L + E T+ GL
Sbjct: 339 RVEDGMKL-FCEMTYQGL 355
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
DA + +M Q P +V +T VL+ I + + L+ +M LG+ D+Y++ + I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
+ C+ +++ A+ ++ M+KLG +P++VT +LL C+ +A ++ M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
N+ Y +++GL ++ A + M KK + T++ +I + G +A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 462 MKKIVAKSFAPGARAWEALL 481
++ +V + P + AL+
Sbjct: 242 LRDMVKRKIDPNVIFFTALI 261
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 229 ICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN 288
I + I+ LC+ + +A+ L + +M + G P V+ + MI R DA +L
Sbjct: 12 ISTAIVDRLCKDGNHINAQNL--FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
M + I PD+V ++ +++ V E + +E++ EML + P TYN I+G CKQ+
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+VD+A +++DSM GC P+VVT +TL+ C+A + + EM +G+ N TY
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
++ G ++ A LL EM+ P TF ++ +C K + +A +++ +
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+ H+K + ST ++ LC+ A + M E G + + +I S C
Sbjct: 1 MGQSHIKADVVIST--AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ A+ L+ +++ P ++ F+ +I VKE + +A I +M + I P +
Sbjct: 59 GRWSDADQLLRHMIEKQIN--PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTI 116
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y ++ G + + D M G PDV T++ ING CK +VD ++I M
Sbjct: 117 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ G N VT TL+ C+ GDL A+ ++ EM GV + T+ ML GL K E+
Sbjct: 177 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Query: 421 GEASLLLEEMLK 432
+A +LE++ K
Sbjct: 237 RKAFAILEDLQK 248
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 103/214 (48%)
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
T ++ L K+ ++A + +M + GI P+V+ Y ++ G + D+L M+
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
+ PD+ T++ IN K+ KV EA +I M++ P +T N+++ C+ +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
AK ++ M KG ++ T+ +++G + + EM ++ + T+ +I
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
CQ G ++ A +L+ ++++ AP + +L
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%)
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
M Q IK DVV T ++ + +G+++ LF EM G+ P+V TYN I+ C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
+A Q++ MI+ P++VT + L+ A + +S+A+ + KEM + TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 410 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
M+DG + + +A +L+ M K P TF +I C+ ++ +E+ ++ +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 470 FAPGARAWEALL 481
+ L+
Sbjct: 181 IVANTVTYTTLI 192
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 156/327 (47%), Gaps = 16/327 (4%)
Query: 84 TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDL 143
T N Y+ L+K + + ++D + + + + T F LI G A +D V+
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLARDVVEQ 209
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES------TFRV 197
F + F P V Q L + +E+ T+ +
Sbjct: 210 FIKSKTFNYRP-------YKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
++ A R+ + D ++L+ M++DGF D ++++ L N +A L + MR+
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA--LNLLNHMRE 320
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
+G PGV+ FT +I L + + Y +++ + G PDVVCYT++++G ++ G+ K
Sbjct: 321 VGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEK 380
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+E+F EM G +P+V+TYN I G C K EA ++ M GC PN V +TL+
Sbjct: 381 AEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNL 404
L AG + +A V+K+M KG ++L
Sbjct: 441 NLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 134/271 (49%), Gaps = 6/271 (2%)
Query: 213 KILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIR 272
++++ MI+DG+ +L+I + E + + + + + + P + ++
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAG--LARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 273 FL--VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 330
L VK+ + +D +Y QM +DG PDV+ Y IV+ G +L L DEM+ G
Sbjct: 231 SLLGVKQYKLIDWVY--EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF 288
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
PD+YTYN+ ++ L NK A+ +++ M ++G +P V+ TL+ L AG L K
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
M E G ++ Y +M+ G + E+ +A + +EM +K P T++++I C
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 451 QKGLINEALELMKKIVAKSFAPGARAWEALL 481
G EA L+K++ ++ P + L+
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V + +KS+ R + ++ ++ +L +++ + M+EDGF D ++++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
+ L+ +M K GF P + + ++ L + + AL +LN M++ G+
Sbjct: 266 ANFRLGKTDRLYRLL--DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+P V+ +T ++ G+ G DE + +G PDV Y V I G ++++A +
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ M + G PNV T N+++ C AG +A ++KEM +G N Y +++ L
Sbjct: 384 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 443
Query: 416 GKAEIGEASLLLEEMLKKCFY 436
++ EA ++++M++K Y
Sbjct: 444 NAGKVLEAHEVVKDMVEKGHY 464
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGI 309
V+ M + GF P V+ + +++ F D LY +L++M +DG PD+ Y I+L +
Sbjct: 244 VYEQMLEDGFTPDVLTY-NIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHL 302
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+ L + M +G+ P V + I+GL + K++ +D +K+GC P+V
Sbjct: 303 ATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
V ++ G+L KA+ + KEM KG N+ TY M+ G + EA LL+E
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
M + P + ++ + G + EA E++K +V K
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +++ +CR A+ +L M E D S II SLC + +A +L +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL--FK 252
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G V+ + ++R L K + D +L M I P+V+ + ++L V EG
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +EL+ EM+ G+ P++ TYN ++G C QN++ EA ++D M++ C P++VT
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C + V + + +G+ N TY I++ G +I A L +EM+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P T+ ++ +C G + +ALE+ + +
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 128/234 (54%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A V G + KLG+ P F +I+ L E + +A+ ++++M ++G +PDVV Y +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
GI GD +L +M + DV+TY+ I+ LC+ +D AI + M G K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+VVT N+L+ LC+AG + ++K+M + + N+ T+ ++LD V + ++ EA+ L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+EM+ + P T++ ++ C + ++EA ++ +V +P + +L+
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 148/289 (51%), Gaps = 4/289 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VL+ + ++ A ++ MI G + + ++ C QN ++ A ++
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML--- 356
Query: 254 DMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
D+ C P ++ FT +I+ +R D + + + + G+ + V Y+I++ G
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G +ELF EM+ G++PDV TY + ++GLC K+++A++I + + K +V
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
T++ +C+ G + A + + KGV+ N+ TY +M+ GL K + EA++LL +M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T++ +I + G + + +L++++ + F+ A + + ++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T ++I+ CR + +A +L +++ G+ D + +I L + V +EA+V+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV--SEAVVLVD 182
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P V+ + ++ + + AL +L +M++ +K DV Y+ ++ + +G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
LF EM G+ V TYN + GLCK K ++ ++ M+ PNV+T N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
LL + G L +A + KEM +G+ N+ TY ++DG + + EA+ +L+ M++
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF ++I C +++ +++ + I + A + L+
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 124/240 (51%)
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
D+ +A+ ++ +M + P ++DF+ + + ++ L Q++ +GI ++
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
I+++ + +++ LG PD T+N I GL + KV EA+ +VD M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ GC+P+VVT N+++ +C +GD S A ++++M + V+ ++ TY ++D L I
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A L +EM K T+++++ +C+ G N+ L+K +V++ P + LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 9/340 (2%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMK---IRIEE 192
R +DA LFF + + P++ ++ SQ M+ I +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY----ETVIYFSQKMELYGISHDL 106
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+F +LI CR R+ +A+ +L M++ G+ ++ C N + A +LV+
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M K G+ P V+ + +I L K AL +LN+M++ G+ DVV Y +L+G+
Sbjct: 167 --MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G + + +M+ + PDV T+ I+ KQ +DEA ++ MI+ PN VT
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N+++ LC G L AK M KG N+ TY ++ G + E L + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ F T++ +I CQ G + AL++ +V++ P
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI LC+ ++ A+++LN M + G G D + +++ LC + A ++ D
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML--RD 236
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K P V+ FT +I VK+ +A + +M Q + P+ V Y +++G+ G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ FD M G P+V TYN I+G CK VDE +++ M G ++ T NT
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ G L A + M + V ++ T+ I+L GL EI A + ++M +
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
Y ++ +I +C+ + +A EL ++ + P AR + ++L
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI + +D A ++ MI+ + + II+ LC + A+ +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK--TFD 305
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P V+ + +I K + + + +M +G D+ Y ++ G G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++F M+ + PD+ T+ + ++GLC +++ A+ D M + +V N
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
++ LC+A + KA + + ++GV+ + TY IM+ GL EA L+ M
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I+ LC R+ A K + M G + + +IS C+ V E + ++
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD--EGMKLFQ 340
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M GF + + +I + + AL I M + PD++ + I+L G+ G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 314 D----YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+ VK D++ + +G++ YN+ I+GLCK +KV++A ++ + G KP+
Sbjct: 401 EIESALVKFDDMRESEKYIGIV----AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
T ++ LC+ G +A +++ M +G+
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LIS C+ R VD +K+ M +GF D + +I C+ + A + W
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
R++ P ++ ++ L AL + M++ +V Y I++ G+
Sbjct: 378 VSRRV--TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPN 368
K ELF + V G+ PD TY + I GLCK EA +++ M + G C+ N
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 33/327 (10%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+R + T+ +LI CR ++D A+ L M++ G L + +I+ C+ D+++AE
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 248 ---------------------------------ALVVWGDMRKLGFCPGVMDFTDMIRFL 274
AL ++ +M G P + FT ++ L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 275 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 334
+ DA+ + N+M + +KP+ V Y +++ G EGD K E EM G++PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 335 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
Y+Y I+GLC + EA VD + K C+ N + LL C G L +A V +E
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 454
M +GV+L+L Y +++DG + + LL+EM + P + ++I + G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 455 INEALELMKKIVAKSFAPGARAWEALL 481
EA + ++ + P + A++
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVI 724
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 37/326 (11%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
E T L+ L + R A+++ N M+ G D I + +I SLCE D++ A+ ++
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
M G ++ + +I L K+++ +A+ I + +KPDVV Y ++ G+
Sbjct: 251 --AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 311 AEGDYVKLDELFDEMLVL-----------------------------------GLIPDVY 335
++ E+ DEML L G+ P+++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
YN I+ LCK K EA + D M K+G +PN VT + L+ C G L A + EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
G++L+++ Y +++G +I A + EM+ K P T+ +++ C KG I
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 456 NEALELMKKIVAKSFAPGARAWEALL 481
N+AL L ++ K AP + LL
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLL 514
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+ LC+++ + +++++ M+ F S ++ L ++ + EAL +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI--EEALNLVK 356
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G P + + +I L K + +A + ++M + G++P+ V Y+I++ G
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
EM+ GL VY YN ING CK + A + MI +P VVT
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+G C G ++KA + EM KG+ +++T+ +L GL I +A L EM +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T++ +I C++G +++A E +K++ K P ++ L+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ VLI LC+ ++V AV I + D ++ LC+ + L + +
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG--LEMMDE 322
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M L F P + ++ L K + +AL ++ ++ G+ P++ Y ++ +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + + LFD M +GL P+ TY++ I+ C++ K+D A+ + M+ G K +V N+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ GD+S A+G M EM K +E + TY ++ G K +I +A L EM K
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF ++ + + GLI +A++L ++ + P + ++
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 133/324 (41%), Gaps = 39/324 (12%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ V+I C + A + L M E G D +I LC + A+ V
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV--- 600
Query: 254 DMRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
D G C + +T ++ +E + +AL + +M Q G+ D+VCY +++ G +
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
D L EM GL PD Y I+ K EA I D MI GC PN VT
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 373 NTLLGALCEAGDLSKAKGVMKEMG-----------------------------------L 397
++ LC+AG +++A+ + +M L
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
KG+ N TY +++ G + I EAS L+ M+ P T+ +I +C++ + +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 458 ALELMKKIVAKSFAPGARAWEALL 481
A+EL + K P A+ L+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLI 864
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E+ L+ L + +++ A+ ++ +++ G + + + +I SLC+ AE L
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL-- 389
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ M K+G P + ++ +I + + AL L +M G+K V Y +++G
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD + EM+ L P V TY + G C + K+++A+++ M G P++ T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
TLL L AG + A + EM V+ N TY +M++G + ++ +A L+EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEA 458
+K P + ++ +I +C G +EA
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 267 FTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
F +I+ V+ R +D + + M + + P+V + +L G+V + ELF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
+ +G+ PDVY Y I LC+ + A +++ M GC N+V N L+ LC+ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
+A G+ K++ K ++ ++ TY ++ GL E +++EML F P + ++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 446 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + ++G I EAL L+K++V +P + AL+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 39/288 (13%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
+ E + L+ CR +++ A+ + M++ G LD ++I + D L
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ +M G P + +T MI K +A I + M +G P+ V YT V++G+
Sbjct: 670 L--KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 310 VAEG------------------------------------DYVKLDELFDEMLVLGLIPD 333
G D K EL + +L GL+ +
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLAN 786
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
TYN+ I G C+Q +++EA +++ MI G P+ +T T++ LC D+ KA +
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 394 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
M KG+ + Y ++ G E+G+A+ L EML++ P + T
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 180 LLKSQHMK-IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
LLK H + ++ ++ + +I A + A I + MI +G + + +I+ LC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ V AE V+ M+ + P + + + L K E M L+ G+ +
Sbjct: 729 KAGFVNEAE--VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN 786
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
Y +++ G +G + EL M+ G+ PD TY IN LC++N V +AI++ +
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
SM + G +P+ V NTL+ C AG++ KA + EM +G+ N T R
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 41/284 (14%)
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
K+ P V + ++ LVK A+ + N M GI+PDV YT V+ + D
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ E+ M G ++ YNV I+GLCK+ KV EA+ I + KP+VVT TL+
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 377 GALCEAGDLSKAKGVMKEM-----------------GLK------------------GVE 401
LC+ + +M EM GL+ GV
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
NL Y ++D L + EA LL + M K P T+ +I C++G ++ AL
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 462 MKKIVAKSFAPGARAWEALLLHSG----SDLTYSETTFAGLFNQ 501
+ ++V + +L+ +G D++ +E A + N+
Sbjct: 425 LGEMVDTGLKLSVYPYNSLI--NGHCKFGDISAAEGFMAEMINK 466
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F +L++ C+ + A K+ + + + + +I+ C+ ++ E +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD--EGFRLKHQ 300
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K P V ++ +I L KE + A + ++M + G+ P+ V +T ++ G G+
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ E + +ML GL PD+ YN +NG CK + A IVD MI+ G +P+ +T T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C GD+ A + KEM G+EL+ + ++ G+ + + +A L EML+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++ C+KG +L+K++ + P + LL
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 10/311 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+F LI+ C++ +D ++ + M + D S +I++LC++N + A L +
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL--FD 334
Query: 254 DMRKLGFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+M K G P + FT +I + E M Y +M G++PD+V Y +++G
Sbjct: 335 EMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD V + D M+ GL PD TY I+G C+ V+ A++I M + G + + V
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
+ L+ +C+ G + A+ ++EM G++ + TY +M+D K + LL+EM
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL----LHSGSD 487
P T++ ++ +C+ G + A L+ ++ P + LL H+ S
Sbjct: 513 SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS 572
Query: 488 LTYSETTFAGL 498
Y + G+
Sbjct: 573 KRYIQKPEIGI 583
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 181 LKSQHMKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
LK Q K R T+ LI+ALC+ ++D A + + M + G + I + +I
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
++ + + M G P ++ + ++ K + A I++ M + G++PD
Sbjct: 357 RNGEIDLMKE--SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+ YT ++ G GD E+ EM G+ D ++ + G+CK+ +V +A + +
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M++ G KP+ VT ++ A C+ GD ++KEM G ++ TY ++L+GL
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNII 446
++ A +LL+ ML P T++ ++
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%)
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G +V + I+++ EG+ ++FDE+ L P V ++N ING CK +DE
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
++ M K +P+V T + L+ ALC+ + A G+ EM +G+ N + ++ G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
EI ++ML K P ++ ++ C+ G + A ++ ++ + P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 474 ARAWEALL 481
+ L+
Sbjct: 415 KITYTTLI 422
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
E+L G +VY +N+ +N CK+ + +A ++ D + K +P VV+ NTL+ C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
+L + + +M ++ TY +++ L + ++ A L +EM K+ P F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I + G I+ E +K+++K P + L+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 133/257 (51%), Gaps = 3/257 (1%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
++F ++ LC+ +RV+ A ++ + F +D ++I++ C + +AL V
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIK--RTPKALEVL 218
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+M + G P + + M++ + + A +MK+ + DVV YT V+ G
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G+ + +FDEM+ G++P V TYN I LCK++ V+ A+ + + M++ G +PNV T
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N L+ L AG+ S+ + +M+ M +G E N TY +M+ +E+ +A L E+M
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 433 KCFYPRSSTFDNIICCM 449
P T++ +I M
Sbjct: 399 GDCLPNLDTYNILISGM 415
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 131/306 (42%), Gaps = 3/306 (0%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V ++ + + ++I TF ++ + D AVK+ M E G D + I+
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
LC+ V A L R F + + ++ +R AL +L +M + GI
Sbjct: 170 VLCKSKRVEKAYELFRALRGR---FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
P++ Y +L G G E F EM DV TY ++G ++ A
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ D MI+ G P+V T N ++ LC+ ++ A + +EM +G E N+ TY +++ GL
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
E L++ M + P T++ +I + + +AL L +K+ + P
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 476 AWEALL 481
+ L+
Sbjct: 407 TYNILI 412
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 3/346 (0%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E +F+ L+R YGLA R + ++ +F RIP F +V +
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+ I T +L+ ALC+ ++ A K+L+ + G + + I+ +
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
D+ SA+ V +M G+ P +T ++ K R +A +++ M+++ I+P+ V
Sbjct: 240 GDMESAKR--VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++ + E + +FDEML +PD I+ LC+ +KVDEA + M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+K C P+ +TL+ LC+ G +++A+ + E KG +L TY ++ G+ K E+
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGEL 416
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
EA L ++M ++ P + T++ +I + + G + E + ++++++
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 126/245 (51%), Gaps = 6/245 (2%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
+I E T+ V+I ALC+ ++ A + + M+E F D +C +I +LCE + V
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD-- 348
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA +W M K P + +I +L KE R +A + ++ ++ I P ++ Y ++
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLI 407
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+G+ +G+ + L+D+M P+ +TYNV I GL K V E +++++ M+++GC
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
PN T L L + G A ++ M + +++ ++ + L G E+ + L
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWELFLKKFAG--ELDKGVLP 524
Query: 427 LEEML 431
L+E+L
Sbjct: 525 LKELL 529
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYIL--NQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
G V ++ L++ +R D ++ + N + GI P++ +++ + + D
Sbjct: 149 FGVKRSVRSLNTLLNVLIQNQR-FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
++ DE+ +GL+P++ TY + G + ++ A ++++ M+ G P+ T L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ C+ G S+A VM +M +E N TY +M+ L + + GEA + +EML++ F
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
P SS +I +C+ ++EA L +K++ + P
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 7/345 (2%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVY-LIRF 130
L + K C PT Y LIK L + + + R TP+ +F+ L+
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR--DGLTPDVVFLNNLMNI 347
Query: 131 YGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
G R+++ ++F + +RCTPTV V K + +
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFG-LDGKICSLIISSLCEQNDVTSAEAL 249
E T+ +LI C+ RV+ A+ +L M E GF CSLI ++L + +A L
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI-NALGKAKRYEAANEL 466
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ ++++ + MI+ K + +A+ + N+MK G PDV Y ++SG+
Sbjct: 467 --FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
V G + + L +M G D+ ++N+ +NG + AI++ +++ G KP+
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
VT NTLLG AG +A +M+EM KG E + TY +LD +
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 251 VWGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
V+ +M G C P + ++ +I K R A+ + ++MK + ++P YT +L
Sbjct: 219 VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIY 278
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G K +LF+EM G P VYTY I GL K +VDEA M++ G P+V
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIGEASLLLE 428
V N L+ L + G + + V EMG+ + +Y ++ L KA + E S +
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDL 488
+M P T+ +I C+ + +AL L++++ K F P A+ +L+ G
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 489 TY 490
Y
Sbjct: 459 RY 460
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 176/426 (41%), Gaps = 80/426 (18%)
Query: 89 YFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRIP 148
Y I+ +V +++ P VL L ++ G A + A+ +F++
Sbjct: 146 YRTIQEVVRNTYVSVSPAVLSEL----------------VKALGRAKMVSKALSVFYQAK 189
Query: 149 RFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIR-------------IEESTF 195
+C PT ++ ++ + QH K+ + T+
Sbjct: 190 GRKCKPT-------------SSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 196 RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
LIS+ ++ R D A+++ + M ++ KI + ++ + V +AL ++ +M
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE--KALDLFEEM 294
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV--------------- 300
++ G P V +T++I+ L K R +A M +DG+ PDVV
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 301 --------------------CYTIVLSGIVAEGDYV-KLDELFDEMLVLGLIPDVYTYNV 339
Y V+ + +V ++ FD+M + P +TY++
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I+G CK N+V++A+ +++ M + G P +L+ AL +A A + KE+
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
++ Y +M+ ++ EA L EM + P ++ ++ M + G+INEA
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 460 ELMKKI 465
L++K+
Sbjct: 535 SLLRKM 540
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 149/397 (37%), Gaps = 74/397 (18%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E I+ L+ Y +++ A+DLF + R C+PTV
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY----------------------- 304
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLD-----------GKI 229
T+ LI L + RVD A M+ DG D GK+
Sbjct: 305 -------------TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 230 CSL------------------------IISSLCEQNDVTSAEALVVWGD-MRKLGFCPGV 264
+ +I +L E S + W D M+ P
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE--VSSWFDKMKADSVSPSE 409
Query: 265 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
++ +I K R AL +L +M + G P Y +++ + Y +ELF E
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
+ Y V I K K+ EA+ + + M G P+V N L+ + +AG
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+++A ++++M G +++++ I+L+G A + E + P T++
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ C G+ EA +M+++ K F A + ++L
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 4/413 (0%)
Query: 69 LSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLI 128
+ +L F++ P Y LIK + LD + + E F+ F + +I
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK-EGFKPDVFSYSTVI 191
Query: 129 RFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKI 188
A ++ DA++LF + P V + + +
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
T ++IS L + RVD +KI M ++ D S +I LC+ +V AE+
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ D RK V+ + M+ + + ++L + M+ ++V Y I++ G
Sbjct: 312 VFNELDERKASI--DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
++ G + ++ M G D TY ++I+GLC V++A+ ++ + G +
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
V +++ LC+ L +A ++KEM GVELN H ++ GL+ + +GEAS L
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
EM K P +++ +IC +C+ G EA +K+++ + P + + LL
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 2/291 (0%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+++T+ + I LC V+ A+ ++ + G LD + II LC++ + A LV
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+M K G +I L+++ R +A + L +M ++G +P VV Y I++ G+
Sbjct: 453 --KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + + EML G PD+ TY++ + GLC+ K+D A+++ ++ G + +V+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
N L+ LC G L A VM M + NL TY +++G + A+++ M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
K P +++ I+ +C ++ A+E P W L+
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 283 ALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
AL + +M++ G +P + Y +L+ V +VK++ LF G+ P++ TYNV I
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
CK+ + ++A +D M K G KP+V + +T++ L +AG L A + EM +GV
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMCQKGLINEALE 460
++ Y I++DG + + + A L + +L+ YP T + +I + + G +++ L+
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 461 LMKKI 465
+ +++
Sbjct: 277 IWERM 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 37/259 (14%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+ +I LC+ +R++ A ++ M + G L+ +C+ +I L D EA
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR--DSRLGEASFFLR 488
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K G P V+ + +I L K + +A + +M ++G KPD+ Y+I+L G+ +
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV---------------- 357
EL+ + L GL DV +N+ I+GLC K+D+A+ ++
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 358 ----------DS---------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
DS M K+G +P++++ NT++ LC +S A +
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 399 GVELNLHTYRIMLDGLVGK 417
G+ ++T+ I++ +V +
Sbjct: 669 GIFPTVYTWNILVRAVVNR 687
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 247 EALVVWGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
+AL V+ MR++ C P + + ++ V+ ++ + + + G+ P++ Y ++
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+ + ++ K D M G PDV++Y+ IN L K K+D+A+++ D M + G
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
P+V N L+ + D A + + V N+ T+ IM+ GL + +
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
+ E M + T+ ++I +C G +++A
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 346 KQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
K + D+A+ + M ++ GC+P + + NTLL A EA K + + GV NL
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149
Query: 405 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
TY +++ K E +A L+ M K+ F P ++ +I + + G +++ALEL +
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 465 IVAKSFAPGARAWEALL 481
+ + AP + L+
Sbjct: 210 MSERGVAPDVTCYNILI 226
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F +L+ C++R VD A++ M E GF + C+ I++ L N + + A V + D
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN--AWVFYAD 215
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEE---------------------------------RGM 281
M ++ V F MI L KE RG
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 282 --DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 339
A I+++MK G +PD+ Y +LS + EG + E+ EM +GL+PD +YN+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNI 332
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I G ++ A D M+K G P T NTL+ L + A+ +++E+ KG
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+ L+ TY I+++G + +A L +EM+ P T+ ++I +C+K EA
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 460 ELMKKIVAKSFAP 472
EL +K+V K P
Sbjct: 453 ELFEKVVGKGMKP 465
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 5/288 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++S +C R A ++L M E G D +++I D+ A A
Sbjct: 297 TYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA--YRD 351
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K G P + +I L E + A ++ ++++ GI D V Y I+++G G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D K L DEM+ G+ P +TY I LC++NK EA ++ + ++ G KP++V N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C G++ +A ++KEM + + + TY ++ GL G+ + EA L+ EM ++
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P +++ +I +KG A + ++++ F P + ALL
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 2/256 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI L +++ A ++ + E G LD +++I+ C+ D A AL
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL--HD 421
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P +T +I L ++ + +A + ++ G+KPD+V ++ G A G
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + L EM ++ + PD TYN + GLC + K +EA +++ M + G KP+ ++ N
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ + GD A V EM G L TY +L GL E A LL EM +
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 434 CFYPRSSTFDNIICCM 449
P S+F ++I M
Sbjct: 602 GIVPNDSSFCSVIEAM 617
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 38/183 (20%)
Query: 321 LFDEMLVLG---LIPDVYTYNVYINGLCKQNKVDEAIQ---------------------- 355
LFDE+++ +++ + C+ VDEAI+
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 356 -------------IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
M ++ K NV T N ++ LC+ G L KAKG + M + G++
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ TY ++ G + I A L++ EM K F P T++ I+ MC +G +E L M
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREM 318
Query: 463 KKI 465
K+I
Sbjct: 319 KEI 321
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 177/402 (44%), Gaps = 14/402 (3%)
Query: 87 AYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEF---IFVYLIRFYGLADRIQDAVDL 143
Y L+ LV + +L + K+ET F +F+ L+R + +D +++
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQM----KYETCRFQESLFLNLMRHFSRSDLHDKVMEM 146
Query: 144 FFRIPRF-RCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISAL 202
F I R P++ +L ++ ++ F +L+
Sbjct: 147 FNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHH 206
Query: 203 CRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL--CEQNDVTSAEALVVWGDM-RKLG 259
C+ +++A ++ M G S+ S+L C S EA+ ++ DM K G
Sbjct: 207 CKNGDINFAFLVVEEMKRSGISYPN---SITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
P + F MI + A IL+ MK++G P+V Y+ +++G G +
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
+ FDE+ GL D Y +N C+ + DEA++++ M C+ + +T N +L L
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
G +A ++ + G +GV LN +YRI+L+ L E+ +A L M ++ +P
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH 443
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+T++ ++ +C+ G + ++ + PG ++W A++
Sbjct: 444 ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+ L++ C++ ++ A + + + + G LD + +++ C + + EA+ + G
Sbjct: 305 NYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE--TDEAMKLLG 362
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M+ + + ++R L E R +AL +L+Q +G+ + Y I+L+ + G
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ K + M G+ P T+N + LC+ + ++++ +++G P +
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWG 482
Query: 374 TLLGALCEAGDL 385
++ ++C+ L
Sbjct: 483 AVVESICKERKL 494
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 153/307 (49%), Gaps = 2/307 (0%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII 234
+ + L S+ MK + +++ L R RR D MI G D I ++
Sbjct: 147 LFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLF 206
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
+Q + E L+ +M LG P V +T I L ++ + +A + MK+ G
Sbjct: 207 QCCFKQGLYSKKEKLL--DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+ P++ Y+ ++ G G+ + L+ E+LV L+P+V + ++G CK ++ A
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M+K G PN+ N L+ C++G++ +A G++ EM + ++ TY I+++GL
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+ ++ EA+ L ++M + +P S+T++++I C++ + +AL+L ++ A P
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 475 RAWEALL 481
+ L+
Sbjct: 445 ITFSTLI 451
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I C+ V A + ++ + + ++ C+ ++ +A +L V
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV-- 328
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K G P + + +I K ++A+ +L++M+ + PDV YTI+++G+ E
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + LF +M + P TYN I+G CK+ +++A+ + M G +PN++T +
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C D+ A G+ EM +KG+ ++ TY ++D +A + EA L +ML+
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKK 464
+P TF ++ ++G ++ A++ ++
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ + I LCR +++ A K+ M + G + S +I C+ +V A L + +
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL--YKE 294
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+ P V+ F ++ K + A + M + G+ P++ Y ++ G G+
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
++ L EM L L PDV+TY + INGLC +++V EA ++ M P+ T N+
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ ++ +A + EM GVE N+ T+ ++DG +I A L EM K
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ +I ++ + EAL L ++ P + L+
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 13/314 (4%)
Query: 79 YSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLA--DR 136
+ DP Y LI + ++ + +L +E + +P+ +F Y I GL D+
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL--SPD-VFTYTILINGLCIEDQ 389
Query: 137 IQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES--T 194
+ +A LF ++ R P+ M + L S+ +E + T
Sbjct: 390 VAEANRLFQKMKNERIFPS---SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F LI C +R + A+ + M G D + +I + ++ ++ EAL ++ D
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM--KEALRLYSD 504
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M + G P F ++ KE R A+ + Q + V +T ++ G+ G
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
++ F +M G+ PD+ +Y + G ++ ++ + + + MIK G PN++ N
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQ 623
Query: 375 LLGALCEAGDLSKA 388
LL +A K+
Sbjct: 624 LLARFYQANGYVKS 637
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 18/307 (5%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ ST+ +++ LC +++ A + M G D ++++ S C+ + A
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW- 540
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ +MR++G P V+ +T +I +K ++ A + M +G P++V Y+ ++ G
Sbjct: 541 -FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 311 AEGDYVKLDELFDEMLVLGLIPD----------------VYTYNVYINGLCKQNKVDEAI 354
G K ++F+ M +PD V TY ++G CK ++V+EA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+++D+M GC+PN + + L+ LC+ G L +A+ V EM G L+TY ++D
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
AS +L +ML+ P + +I +C+ G +EA +LM+ + K P
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 475 RAWEALL 481
+ A++
Sbjct: 780 VTYTAMI 786
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 27/324 (8%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRR------VDYAVKILNCMIEDGFGLDGKICSLI 233
++K HM + + +LI ++C + +D A K + M+ G L+ S
Sbjct: 398 MVKCGHMPGYV---VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 234 ISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD 293
LC +A V +M GF P ++ ++ +L + A + +MK+
Sbjct: 455 TRCLCSAGKY--EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G+ DV YTI++ G + + F+EM +G P+V TY I+ K KV A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM-GLKGV------------ 400
++ ++M+ GC PN+VT + L+ C+AG + KA + + M G K V
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 401 ---ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
N+ TY +LDG + EA LL+ M + P +D +I +C+ G ++E
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 458 ALELMKKIVAKSFAPGARAWEALL 481
A E+ ++ F + +L+
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLI 716
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 17/299 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA----EAL 249
T+ LI A + ++V YA ++ M+ +G + S +I C+ V A E +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 250 VVWGDMRKLGFC----------PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
D+ + P V+ + ++ K R +A +L+ M +G +P+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
+ Y ++ G+ G + E+ EM G +YTY+ I+ K + D A +++
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 419
M++ C PNVV ++ LC+ G +A +M+ M KG + N+ TY M+DG +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA---LELMKKIVAKSFAPGAR 475
I LLE M K P T+ +I C+ G ++ A LE MK+ + G R
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 43/326 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+ C+ RV+ A K+L+ M +G + + +I LC+ + A+ V
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE--VKT 698
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + GF + ++ +I K +R A +L++M ++ P+VV YT ++ G+ G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 314 DYVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
K DE + M ++ G P+V TY I+G K++ +++++ M G PN V
Sbjct: 759 ---KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 371 TCNTLLGALCEAGDLSKAK---------------------------------GVMKEMGL 397
T L+ C+ G L A G++ E+G
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM--LKKCFYPRSSTFDNIICCMCQKGLI 455
L YR+++D L+ + A LLEE+ SST++++I +C +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935
Query: 456 NEALELMKKIVAKSFAPGARAWEALL 481
A +L ++ K P +++ +L+
Sbjct: 936 ETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 11/288 (3%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ + R ST+ LI A + R+D A I M +DG SLC+
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A LV F P + +T +I L + +A+ LN+M+ P+VV Y+
Sbjct: 287 REALTLV-----ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+L G + + + + + M++ G P +N ++ C A +++ M+K
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 364 GCKPNVVTCNTLLGALCEAGD------LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
G P V N L+G++C D L A+ EM GV LN L
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ +A ++ EM+ + F P +ST+ ++ +C + A L +++
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 346
L ++ + PD V YT ++SG+ + + + + M +P+V TY+ + G
Sbjct: 290 LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
+ ++ ++++ M+ GC P+ N+L+ A C +GD S A ++K+M G
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 407 YRIMLDGLVGKAEIGEASLL------LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
Y I++ + G + LL EML + C+C G +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 461 LMKKIVAKSFAPGARAWEALL 481
++++++ + F P + +L
Sbjct: 470 VIREMIGQGFIPDTSTYSKVL 490
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL L ++K +P Y ++ + + EM + L D +T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
LCK K EA+ +V++ P+ V L+ LCEA +A + M
Sbjct: 279 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
N+ TY +L G + K ++G +L M+ + YP F++++ C G + A +L+
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 463 KKIVAKSFAPGARAWEALL 481
KK+V PG + L+
Sbjct: 396 KKMVKCGHMPGYVVYNILI 414
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 37/270 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI +++R D A K+L+ M+E+ + I + +I LC+ A L+
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM- 769
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P V+ +T MI + L +L +M G+ P+ V Y +++ G
Sbjct: 770 -MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 314 ----------------------DYVKLDELFDEMLV--LGLI---------PDVYTYNVY 340
Y K+ E F++ + LGL+ P + Y +
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCK--PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
I+ L K +++ A+++++ + T N+L+ +LC A + A + EM K
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
GV + ++ ++ GL ++I EA LLL+
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 37/323 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF L++ C R++ A+ + + ++ GF + + +I LC+ + A L +
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL--FN 212
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P V+ + ++ L + R DA ++L M + I+P+V+ +T ++ V G
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ EL++ M+ + + PDV+TY INGLC +DEA Q+ M + GC PN V
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELN------------------------------ 403
TL+ C++ + + EM KGV N
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 404 -----LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
+ TY ++LDGL ++ +A ++ E M K+ T+ II MC+ G + +A
Sbjct: 393 RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
+L + +K P + ++
Sbjct: 453 FDLFCSLFSKGMKPNVITYTTMI 475
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P ++DFT ++ + K R + + QM+ GI P + IV+ + +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+M+ LG PD+ T+ +NG C N++++AI + D ++ +G KPNVVT TL+ LC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
L+ A + +MG G N+ TY ++ GL G+A+ LL +M+K+ P T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
F +I + G + EA EL ++ S P + +L+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 37/320 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI LC+ R +++AV++ N M +G + + +++ LCE A L+
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL--R 247
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM K P V+ FT +I VK + M+A + N M Q + PDV Y +++G+ G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++F M G P+ Y I+G CK +V++ ++I M + G N +T
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK- 432
L+ C G A+ V +M + ++ TY ++LDGL ++ +A ++ E M K
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 433 ----------------------------------KCFYPRSSTFDNIICCMCQKGLINEA 458
K P T+ +I C++GLI+EA
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 459 LELMKKIVAKSFAPGARAWE 478
L KK+ F P ++
Sbjct: 488 DSLFKKMKEDGFLPNESVYK 507
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 4/259 (1%)
Query: 186 MKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
MK RIE + TF LI A ++ ++ A ++ N MI+ D +I+ LC +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A + M + G P + +T +I K +R D + I +M Q G+ + + YT
Sbjct: 310 DEARQMFYL--MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+++ G G E+F++M PD+ TYNV ++GLC KV++A+ I + M K
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
N+VT ++ +C+ G + A + + KG++ N+ TY M+ G + I EA
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 424 SLLLEEMLKKCFYPRSSTF 442
L ++M + F P S +
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 3/284 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
IE F VL+ V A+++L+ M + GF D + ++ +LC+ V A L
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ DMR + F + FT ++ + + M+A Y+L QM + G +PD+V YT +LSG
Sbjct: 241 --FEDMR-MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G +L +M G P+ Y V I LCK ++++EA+++ M + C+ +V
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
VT L+ C+ G + K V+ +M KG+ + TY ++ K E L+E+
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEK 417
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
M + ++P ++ +I C+ G + EA+ L ++ +PG
Sbjct: 418 MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 165/357 (46%), Gaps = 12/357 (3%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFI----FVYLIRFYGLADRIQDAVDL 143
Y ++K L S ++ V +E + K E P+ I FV L++ + AD ++ A+++
Sbjct: 150 YKSMVKIL---SKMRQFGAVWGLIEEMRK-ENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
+P+F P L + M+ + F L+ C
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK--LFEDMRMRFPVNLRYFTSLLYGWC 263
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
R+ ++ A +L M E GF D + ++S N A+A + DMR+ GF P
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA--NAGKMADAYDLLRDMRRRGFEPN 321
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 323
+T +I+ L K +R +A+ + +M++ + DVV YT ++SG G K + D
Sbjct: 322 ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLD 381
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
+M+ GL+P TY + K+ +E +++++ M ++ P++ N ++ C+ G
Sbjct: 382 DMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG 441
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 440
++ +A + EM G+ + T+ IM++GL + + EAS +EM+ + + S
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ 498
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 327 VLGLIPDVYTYN----------VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
V GLI ++ N V + + V +AI+++D M K G +P+ LL
Sbjct: 166 VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLL 225
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
ALC+ G + A + ++M ++ +NL + +L G ++ EA +L +M + F
Sbjct: 226 DALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFE 284
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + N++ G + +A +L++ + + F P A + L+
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 34/312 (10%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ + R+ ++ A + + M+ G L+ + SL I C L++ M+
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLM--GMKH 299
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI---------------------- 295
G P ++ FT I L K +A +L ++K GI
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 296 ----------KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
+P++ Y+ LS I + GD ++ +F E+ LGL+PD Y I+G C
Sbjct: 360 AIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC 419
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
+ D+A Q +++K G P++ T L+GA G +S A+ V + M +G++L++
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
TY ++ G ++ + L++EM P +T++ +I M +G I+EA E++ ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 466 VAKSFAPGARAW 477
+ + F P A+
Sbjct: 540 IRRGFVPSTLAF 551
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 6/278 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I C + R D A + +++ G +++I + ++ AE+ V+ +
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES--VFRN 468
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M+ G V+ + +++ K + ++++M+ GI PDV Y I++ +V G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +E+ E++ G +P + I G K+ EA + M L KP+VVTC+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
LL C+A + KA + ++ G++ ++ Y ++ G +I +A L+ M+++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 435 FYPRSSTFDNIICCMCQKGLINE----ALELMKKIVAK 468
P ST ++ + K +N ++ L + IVAK
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+T +LI A R + A + M +G LD + ++ + + + L+
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI-- 501
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+MR G P V + +I +V +A I++++ + G P + +T V+ G
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
GD+ + L+ M L + PDV T + ++G CK ++++AI + + ++ G KP+VV
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG---EASLLLEE 429
NTL+ C GD+ KA ++ M +G+ N T+ ++ GL GK + AS+LLEE
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEE 681
Query: 430 ML 431
++
Sbjct: 682 II 683
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L+ +H IR + F V I LC+ + A +L + G D S +I
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ A L+ +R P + ++ + + + A I ++ + G+ P
Sbjct: 352 CKVGKPEEAIKLIHSFRLR-----PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D VCYT ++ G G K + F +L G P + T + I + + +A +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
+M G K +VVT N L+ + L+K ++ EM G+ ++ TY I++ +V +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
I EA+ ++ E++++ F P + F ++I ++G EA L + P
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 478 EALL 481
ALL
Sbjct: 587 SALL 590
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 9/306 (2%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC--SLIIS 235
+L K + I + + +I C++ + + A+K+++ F L I S +S
Sbjct: 327 SVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH-----SFRLRPNIFVYSSFLS 381
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
++C D+ A ++ ++ +LG P + +T MI R A + + G
Sbjct: 382 NICSTGDMLRAST--IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
P + TI++ G + +F M GL DV TYN ++G K +++++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
++D M G P+V T N L+ ++ G + +A ++ E+ +G + + ++ G
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ + EA +L M P T ++ C+ + +A+ L K++ P
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 476 AWEALL 481
+ L+
Sbjct: 620 LYNTLI 625
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFDEM 325
F+ +I ++E + AL + ++ Q GI P VC +++ + G + E + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHM 262
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
L G + +++I C D+ +++ M G +P++V + LC+AG L
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEM-LKKCFYPRSSTF 442
+A V+ ++ L G+ + + ++DG VGK E EA L+ L+ + SS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE--EAIKLIHSFRLRPNIFVYSSFL 380
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAP 472
NI C G + A + ++I P
Sbjct: 381 SNI----CSTGDMLRASTIFQEIFELGLLP 406
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 34/312 (10%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ + R+ ++ A + + M+ G L+ + SL I C L++ M+
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLM--GMKH 299
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI---------------------- 295
G P ++ FT I L K +A +L ++K GI
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 296 ----------KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
+P++ Y+ LS I + GD ++ +F E+ LGL+PD Y I+G C
Sbjct: 360 AIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC 419
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
+ D+A Q +++K G P++ T L+GA G +S A+ V + M +G++L++
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
TY ++ G ++ + L++EM P +T++ +I M +G I+EA E++ ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 466 VAKSFAPGARAW 477
+ + F P A+
Sbjct: 540 IRRGFVPSTLAF 551
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 6/278 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I C + R D A + +++ G +++I + ++ AE+ V+ +
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES--VFRN 468
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M+ G V+ + +++ K + ++++M+ GI PDV Y I++ +V G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +E+ E++ G +P + I G K+ EA + M L KP+VVTC+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
LL C+A + KA + ++ G++ ++ Y ++ G +I +A L+ M+++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 435 FYPRSSTFDNIICCMCQKGLINE----ALELMKKIVAK 468
P ST ++ + K +N ++ L + IVAK
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+T +LI A R + A + M +G LD + ++ + + + L+
Sbjct: 444 TTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI-- 501
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+MR G P V + +I +V +A I++++ + G P + +T V+ G
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
GD+ + L+ M L + PDV T + ++G CK ++++AI + + ++ G KP+VV
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG---EASLLLEE 429
NTL+ C GD+ KA ++ M +G+ N T+ ++ GL GK + AS+LLEE
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEE 681
Query: 430 ML 431
++
Sbjct: 682 II 683
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++L+ +H IR + F V I LC+ + A +L + G D S +I
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ A L+ +R P + ++ + + + A I ++ + G+ P
Sbjct: 352 CKVGKPEEAIKLIHSFRLR-----PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D VCYT ++ G G K + F +L G P + T + I + + +A +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
+M G K +VVT N L+ + L+K ++ EM G+ ++ TY I++ +V +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
I EA+ ++ E++++ F P + F ++I ++G EA L + P
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 478 EALL 481
ALL
Sbjct: 587 SALL 590
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 9/306 (2%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC--SLIIS 235
+L K + I + + +I C++ + + A+K+++ F L I S +S
Sbjct: 327 SVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH-----SFRLRPNIFVYSSFLS 381
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
++C D+ A ++ ++ +LG P + +T MI R A + + G
Sbjct: 382 NICSTGDMLRAST--IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
P + TI++ G + +F M GL DV TYN ++G K +++++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
++D M G P+V T N L+ ++ G + +A ++ E+ +G + + ++ G
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ + EA +L M P T ++ C+ + +A+ L K++ P
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 476 AWEALL 481
+ L+
Sbjct: 620 LYNTLI 625
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFDEM 325
F+ +I ++E + AL + ++ Q GI P VC +++ + G + E + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHM 262
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
L G + +++I C D+ +++ M G +P++V + LC+AG L
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEM-LKKCFYPRSSTF 442
+A V+ ++ L G+ + + ++DG VGK E EA L+ L+ + SS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE--EAIKLIHSFRLRPNIFVYSSFL 380
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAP 472
NI C G + A + ++I P
Sbjct: 381 SNI----CSTGDMLRASTIFQEIFELGLLP 406
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 8/292 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +L+ ALC+ A L+ M + G + + +I L + + +AL ++G
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD--DALELFG 422
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M LG P + I + K + AL +MK GI P++V L + G
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++F + +GL+PD TYN+ + K ++DEAI+++ M++ GC+P+V+ N
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 374 TLLGALCEAGDLSKAKGV---MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
+L+ L +A + +A + MKEM LK + TY +L GL +I EA L E M
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVV---TYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
++K P + TF+ + C+C+ + AL+++ K++ P + ++
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 164/397 (41%), Gaps = 44/397 (11%)
Query: 95 LVNTSHLQDIPPVLDHLERVEKF--ETPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRC 152
+V +DI V+ L+ +E + + F IR G A +I +A ++ R+ C
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 153 TPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAV 212
P V T+ VLI ALC R++D A
Sbjct: 290 GPDVV------------------------------------TYTVLIDALCTARKLDCAK 313
Query: 213 KILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIR 272
++ M D ++ + D+ S + W +M K G P V+ FT ++
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF--WSEMEKDGHVPDVVTFTILVD 371
Query: 273 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 332
L K +A L+ M+ GI P++ Y ++ G++ ELF M LG+ P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
YTY V+I+ K A++ + M G PN+V CN L +L +AG +AK +
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 393 KEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
GLK + L + TY +M+ EI EA LL EM++ P +++I +
Sbjct: 492 --YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 451 QKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 487
+ ++EA ++ ++ P + LL G +
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 137/306 (44%), Gaps = 2/306 (0%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
P L K + + ++ LI L + R A+++ MI +GF + S ++
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
L ++ D+ S L+ +M LG P V FT IR L + + +A IL +M +G
Sbjct: 232 GLGKRRDIDSVMGLL--KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
PDVV YT+++ + E+F++M PD TY ++ +D Q
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
M K G P+VVT L+ ALC+AG+ +A + M +G+ NLHTY ++ GL+
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ +A L M P + T+ I + G ALE +K+ K AP
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 476 AWEALL 481
A A L
Sbjct: 470 ACNASL 475
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 5/280 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI L R+ R+D A+++ M G + I + D S AL +
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD--SVSALETFE 457
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ G P ++ + L K R +A I +K G+ PD V Y +++ G
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + +L EM+ G PDV N IN L K ++VDEA ++ M ++ KP VVT N
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TLL L + G + +A + + M KG N T+ + D L E+ A +L +M+
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 434 CFYPRSSTFDNIICCMCQKGLINEAL---ELMKKIVAKSF 470
P T++ II + + G + EA+ MKK+V F
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%), Gaps = 8/257 (3%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA ++ ++ +G P + + M++ K +A+ +L++M ++G +PDV+ ++
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ + + ++F M + L P V TYN + GL K K+ EAI++ + M++ GC
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
PN +T NTL LC+ +++ A ++ +M G ++ TY ++ GLV ++ EA
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPGARAWE----ALL 481
+M KK YP T ++ + + LI +A +++ + + P WE ++L
Sbjct: 666 FHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 482 LHSGSD--LTYSETTFA 496
+G D +++SE A
Sbjct: 725 AEAGIDNAVSFSERLVA 741
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 12/307 (3%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLD-----GKICSLIISSLC 238
Q I+ + +T+ + +L + A L M E GF L+ G I L+ S C
Sbjct: 145 QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFC 204
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
EA+ V+ M GF P + ++ ++ L K + +L +M+ G+KP+
Sbjct: 205 -------TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
V +TI + + G + E+ M G PDV TY V I+ LC K+D A ++ +
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M KP+ VT TLL + DL K EM G ++ T+ I++D L
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
GEA L+ M + P T++ +IC + + +++ALEL + + P A +
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 479 ALLLHSG 485
+ + G
Sbjct: 438 VFIDYYG 444
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+T+ L+ A + ++D ++ M + +++IS L + +V +AL ++
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD--DALDLY 878
Query: 253 GD-MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
D M F P + +I L K R +A + M G +P+ Y I+++G
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G+ LF M+ G+ PD+ TY+V ++ LC +VDE + + + G P+VV
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
N ++ L ++ L +A + EM +G+ +L+TY ++ L + EA + E+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
+ P TF+ +I G A + + +V F+P +E L
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 9/316 (2%)
Query: 134 ADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES 193
AD I+ A D+F ++ C P V + S H +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH-ECEANTI 856
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIED-GFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
T ++IS L + VD A+ + ++ D F +I L + + A+ L +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL--F 914
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M G P + +I K A + +M ++G++PD+ Y++++ +
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVT 371
G + F E+ GL PDV YN+ INGL K ++++EA+ + + M G P++ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEE 429
N+L+ L AG + +A + E+ G+E N+ T+ ++ G L GK E A + +
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE--HAYAVYQT 1092
Query: 430 MLKKCFYPRSSTFDNI 445
M+ F P + T++ +
Sbjct: 1093 MVTGGFSPNTGTYEQL 1108
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 270 MIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
+I LVK DAL + + D P Y ++ G+ G + +LF+ ML
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
G P+ YN+ ING K + D A + M+K G +P++ T + L+ LC G + +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCFYPRSSTFDNIIC 447
KE+ G+ ++ Y ++++GL + EA +L EM + P T++++I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ G++ EA ++ +I P + AL+
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 12/256 (4%)
Query: 232 LIISSLCE---QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN 288
LI S L E N V+ +E LV G R G +IR+ K A +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRD-----GDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 289 QMKQD-GIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCK 346
+ +D G++P + Y +++ G++ E D +++ ++F ++ G IPDV TYN ++ K
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLL-EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE-MGLKGVELNLH 405
K+DE ++ M C+ N +T N ++ L +AG++ A + + M +
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTAC 892
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
TY ++DGL + EA L E ML P + ++ +I + G + A L K++
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 466 VAKSFAPGARAWEALL 481
V + P + + L+
Sbjct: 953 VKEGVRPDLKTYSVLV 968
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 8/302 (2%)
Query: 77 KSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGL--A 134
KS C P Y FL+ + + ++ + + + E + I GL A
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDEL---FELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 135 DRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEEST 194
+ DA+DL++ + R Q+ R +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +LI+ + D A + M+++G D K S+++ LC V E L + +
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD--EGLHYFKE 986
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 313
+++ G P V+ + +I L K R +AL + N+MK GI PD+ Y ++ + G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++++E+ GL P+V+T+N I G K + A + +M+ G PN T
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Query: 374 TL 375
L
Sbjct: 1107 QL 1108
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 161/364 (44%), Gaps = 44/364 (12%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++ ++ + MK++ T+ L++ L + ++ A+++ M++ G + + + L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ ++VT AL + M +G P V + +I LVK + +A+ +QMK+ + P
Sbjct: 619 CKNDEVTL--ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYP 675
Query: 298 DVVCYTIVLSGIVAEG---DYVKL------------DELFDEMLVLGLIPDV-------Y 335
D V +L G+V D K+ LF E L+ ++ + +
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 336 TYNVYINGL---------------CKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGAL 379
+ + NG+ CK N V A + + K LG +P + T N L+G L
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
EA + A+ V ++ G ++ TY +LD +I E L +EM +
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 440 STFDNIICCMCQKGLINEALELMKKIVA-KSFAPGARAWEALL--LHSGSDLTYSETTFA 496
T + +I + + G +++AL+L +++ + F+P A + L+ L L ++ F
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 497 GLFN 500
G+ +
Sbjct: 916 GMLD 919
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
+L + +G ++ +FD M + D TY L + + +A + M + G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
N + N L+ L ++ ++A V + M L+G +L TY ++ GL + +I
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
LL+EM P TF I + + G INEA E++K++ + P + L+
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +L + + A+ + ++ G ++ CS+++++LC++ + AE ++
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE-ILGR 379
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K G P + + MI ++ + A + M++ G+KPD + Y ++ G
Sbjct: 380 EMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++ ++M + G+ P V TYN+ I G ++ + D+ I+ M G PNVV+
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ LC+ L +A+ V ++M +GV + Y +++DG K +I +A +EMLKK
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
T++ +I + G ++EA +L+ +I K P + +L+ G
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+++ T +L++ALC+ +++ A +IL + G + I + +I C + D+ A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ M K G P + + +IR + +A +N+MK G+ P V Y I++
Sbjct: 410 MKIEA--MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G + ++ K ++ EM G +P+V +Y IN LCK +K+ EA + M G P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
V N L+ C G + A KEM KG+ELNL TY ++DGL ++ EA LL
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
E+ +K P T++++I G + + L +++ P + + L+
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 162/374 (43%), Gaps = 29/374 (7%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
+F ++ L + I +A DLFF + P+ ++ L
Sbjct: 109 DFSYLLLSVLLNESKMISEAADLFFALRNEGIYPS--------------SDSLTLLLDHL 154
Query: 181 LKSQHMKIRIE------ESTFR-------VLISALCRIRRVDYAVKILNCMIEDGFGLDG 227
+K++ ++ I ES FR I A ++ V +++ N M D
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 228 KICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYIL 287
I +++I LC+ + AE L + +M P ++ + +I K + +
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQL--FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 288 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 347
+MK D I+P ++ + +L G+ G + + EM LG +PD +T+++ +G
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 348 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
K + A+ + ++ + G K N TC+ LL ALC+ G + KA+ ++ KG+ N Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 408 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
M+DG K ++ A + +E M K+ P ++ +I C+ G + A + + K+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 468 KSFAPGARAWEALL 481
K +P + L+
Sbjct: 453 KGVSPSVETYNILI 466
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI C+ + + K+ M D + ++ L + V AE V
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN--VLK 308
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M+ LGF P F+ + E+ AL + G+K + +I+L+ + EG
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K +E+ + GL+P+ YN I+G C++ + A +++M K G KP+ + N
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ CE G++ A+ + +M LKGV ++ TY I++ G K E + +L+EM
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++ +I C+C+ + EA + + + + +P R + L+
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 35/290 (12%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LI R D IL M ++G + +I+ LC+ + + EA +V
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL--EAQIVKR 518
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM G P V + +I + + DA +M + GI+ ++V Y ++ G+ G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++L E+ GL PDV+TYN I+G V I + + M + G KP + T +
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 374 TLLGALCEA--------------------------------GDLSKAKGVMKEMGLKGVE 401
L+ +LC GD+ KA + K+M K +
Sbjct: 639 LLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
L+ TY ++ G + ++ E L++EM + P + T++ I+ C+
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 18/253 (7%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
K+RI + +LI C +++ A + M++ G L+ + +I L ++ A
Sbjct: 528 KVRI----YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIR---FLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
E L++ ++ + G P V + +I F +R + ALY +MK+ GIKP + Y
Sbjct: 584 EDLLL--EISRKGLKPDVFTYNSLISGYGFAGNVQRCI-ALY--EEMKRSGIKPTLKTYH 638
Query: 304 IVLSGIVAEGDYVKLDE-LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++S EG ++L E LF EM L PD+ YN ++ +++A + MI+
Sbjct: 639 LLISLCTKEG--IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
+ T N+L+ + G L + + ++ EM + +E TY I++ G +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 423 ASLLLEEMLKKCF 435
A + EM +K F
Sbjct: 754 AYVWYREMQEKGF 766
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 171/395 (43%), Gaps = 39/395 (9%)
Query: 87 AYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFR 146
+Y LI L + + + +L L R E +F+ LI+ YG A + A+D+F +
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHK 141
Query: 147 IPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIR 206
I F C T+ ++ M++R +F +LI +
Sbjct: 142 ITSFDCVRTIQSLNTLINVLVDNGELEK-AKSFFDGAKDMRLRPNSVSFNILIKGF--LD 198
Query: 207 RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD 266
+ D+ A V+ +M ++ P V+
Sbjct: 199 KCDWEA-----------------------------------ACKVFDEMLEMEVQPSVVT 223
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+ +I FL + + A +L M + I+P+ V + +++ G+ +G+Y + +L +M
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
G P + Y + ++ L K+ ++DEA ++ M K KP+VV N L+ LC +
Sbjct: 284 YRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+A V+ EM +KG + N TYR+M+DG + +L ML P +TF ++
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + G ++ A +++ + K+ + G+ AW+ LL
Sbjct: 404 AGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLL 438
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
Q M R + ++ LI L + R D +IL + + +I + V
Sbjct: 73 QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSV 132
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+A+ V+ + + +I LV A + K ++P+ V +
Sbjct: 133 D--KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN 190
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
I++ G + + D+ ++FDEML + + P V TYN I LC+ + + +A +++ MIK
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
+PN VT L+ LC G+ ++AK +M +M +G + L Y I++ L + I EA
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
LLL EM K+ P ++ ++ +C + + EA ++ ++ K P A + ++
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+V G+ K FD + L P+ ++N+ I G + + A ++ D M+++ +P+
Sbjct: 161 LVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS 220
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VVT N+L+G LC D+ KAK ++++M K + N T+ +++ GL K E EA L+
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
+M + P + ++ + ++G I+EA L+ ++ + P + L+ H
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA------- 246
+F +LI C ++ +++ + + GF D + ++ LC ++ ++ A
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 247 ------EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
EA+ ++ M ++G P V+ F +I L E R ++A ++N+M G+ DVV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++G+ GD L +M + PDV Y+ I+ LCK +A + M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
++ G PNV T N ++ C G S A+ ++++M + + ++ T+ ++ V + ++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
EA L +EML +C +P + T++++I C+ ++A
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 17/299 (5%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+I R+ R D A+ + M L+ +++I C+ + ++ + L +G + K
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTK 169
Query: 258 LGFCPGVMDFTDMIRFLVKEER---------------GMDALYILNQMKQDGIKPDVVCY 302
LGF P V+ F ++ L E+R ++A+ + +QM + G+ P V+ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++G+ EG ++ L ++M+ GL DV TY +NG+CK A+ ++ M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
KP+VV + ++ LC+ G S A+ + EM KG+ N+ TY M+DG +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A LL +M+++ P TF+ +I ++G + EA +L +++ + P + +++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 21/303 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGF-------------GLDGKICSL--IISSLC 238
TF L+ LC R+ A+ + M+E GF GL + + +I+ LC
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ V A ALV M G V+ + ++ + K AL +L++M++ IKPD
Sbjct: 238 LEGRVLEAAALV--NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
VV Y+ ++ + +G + LF EML G+ P+V+TYN I+G C + +A +++
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
MI+ P+V+T N L+ A + G L +A+ + EM + + + TY M+ G
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
+A + + M P TF+ II C+ ++E ++L+++I + +
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 479 ALL 481
L+
Sbjct: 472 TLI 474
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LISA + ++ A K+ + M+ D + +I C+ N A+
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK------ 421
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M L P V+ F +I + +R + + +L ++ + G+ + Y ++ G
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF EM+ G+ PD T N+ + G C+ K++EA+++ + + + V N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ +C+ + +A + + + GVE ++ TY +M+ G GK+ I +A++L +M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
P +ST++ +I + G I++++EL+ ++ + F+ A
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+L K + I+ + + +I LC+
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCK--------------------------------- 308
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
D ++A ++ +M + G P V + MI R DA +L M + I P
Sbjct: 309 ----DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
DV+ + ++S V EG + ++L DEML + PD TYN I G CK N+ D+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
D M P+VVT NT++ C A + + +++E+ +G+ N TY ++ G
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ A L +EM+ P + T + ++ C+ + EALEL + I
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +I CR +RVD +++L + G + + +I CE +++ +A+ L +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQ 491
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G CP + ++ + E+ +AL + ++ I D V Y I++ G+
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF + + G+ PDV TYNV I+G C ++ + +A + M G +P+ T N
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
TL+ +AG++ K+ ++ EM G + T ++
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
L+ +M + + ++Y++N+ I C +K+ ++ + KLG +P+VVT NTLL LC
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 381 EAGDLSKAK---GVMKEMGL--------KGVELNLH----TYRIMLDGLVGKAEIGEASL 425
+S+A G M E G + VE+ L T+ +++GL + + EA+
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL---- 481
L+ +M+ K + T+ I+ MC+ G AL L+ K+ P + A++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 482 ---LHSGSDLTYSETTFAGL 498
HS + +SE G+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q+L + + +T+ LI C + ++ A + MI G D C++++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
CE + A L M K+ + + +I + K + +A + + G++P
Sbjct: 513 CENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
DV Y +++SG + + LF +M G PD TYN I G K ++D++I+++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGD 384
M G + T +C D
Sbjct: 631 SEMRSNGFSGDAFTIKMAEEIICRVSD 657
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 13/381 (3%)
Query: 122 FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILL 181
+ + LI + + R ++AV++F ++ C PT+ + ++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K + I + T+ LI+ R A ++ M GF D + ++ + +
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
EA+ V +M GF P ++ + +I ++ +A+ + NQM + G KPDV
Sbjct: 329 --RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
YT +LSG G +F+EM G P++ T+N +I + K E ++I D +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
G P++VT NTLL + G S+ GV KEM G T+ ++
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG-------- 473
+A + ML P ST++ ++ + + G+ ++ +++ ++ P
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 474 ---ARAWEALLLHSGSDLTYS 491
A E L+HS ++ YS
Sbjct: 567 HAYANGKEIGLMHSLAEEVYS 587
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 151/323 (46%), Gaps = 5/323 (1%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
+K + + ++ S ++IS L + RV A + N + EDGF LD + +IS+
Sbjct: 161 FMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA- 219
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDAL-YILNQMKQDGIKPD 298
N EA+ V+ M + G P ++ + ++ K + + ++ +MK DGI PD
Sbjct: 220 -NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
Y +++ + + ++F+EM G D TYN ++ K ++ EA+++++
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M+ G P++VT N+L+ A G L +A + +M KG + ++ TY +L G
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
++ A + EEM P TF+ I +G E +++ +I +P W
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 479 ALLLHSGSDLTYSETTFAGLFNQ 501
LL G + SE + G+F +
Sbjct: 459 TLLAVFGQNGMDSEVS--GVFKE 479
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 2/279 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LISA R +D A+++ N M E G D + ++S V SA + ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA--MSIFE 408
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+MR G P + F I+ + + + I +++ G+ PD+V + +L+ G
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ +F EM G +P+ T+N I+ + ++A+ + M+ G P++ T N
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T+L AL G +++ V+ EM + N TY +L EIG L EE+
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
PR+ ++ + L+ EA ++ + F+P
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA + ++++ GF P + M+ + + A +L+ MK+ G P + Y ++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
D+ K +E+ E+L G+ PD+ +YN I C+ ++ +A +I M G
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P+V+T NT +G+ +A GV++ M G N +TY ++DG EA L
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 427 LEEM 430
+E++
Sbjct: 792 VEDL 795
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 123/304 (40%), Gaps = 39/304 (12%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL------------- 237
E TF LISA R + A+ + M++ G D + ++++L
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 238 -------CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM--------- 281
C+ N++T L + + +++G + + + V E R +
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGL---MHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 282 -------DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 334
+A +++K+ G PD+ ++S K + + D M G P +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 335 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
TYN + + ++ +I+ ++ G KP++++ NT++ A C + A + E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 454
M G+ ++ TY + + EA ++ M+K P +T+++I+ C+
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 455 INEA 458
+EA
Sbjct: 785 KDEA 788
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/497 (18%), Positives = 189/497 (38%), Gaps = 78/497 (15%)
Query: 69 LSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLI 128
+++L++ KS P Y LI S Q+ V + + + F + + L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM-KAAGFSYDKVTYNALL 321
Query: 129 RFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL-LKSQHMK 187
YG + R ++A+ + + +P++ M+ + + LK+Q +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG----MLDEAMELKNQMAE 377
Query: 188 --IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG--------------FGLDGK--- 228
+ + T+ L+S R +V+ A+ I M G +G GK
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 229 ---------ICSL--------IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMI 271
+C L + ++ QN + S E V+ +M++ GF P F +I
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS-EVSGVFKEMKRAGFVPERETFNTLI 496
Query: 272 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 331
+ A+ + +M G+ PD+ Y VL+ + G + + +++ EM
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 332 PDVYTY----NVYING------------------------------LCKQ-NKVDEAIQI 356
P+ TY + Y NG +C + + + EA +
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ + G P++ T N+++ ++KA GV+ M +G ++ TY ++
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
A+ G++ +L E+L K P +++ +I C+ + +A + ++ P
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 477 WEALLLHSGSDLTYSET 493
+ + +D + E
Sbjct: 737 YNTFIGSYAADSMFEEA 753
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+T ++S R + V A +L+ M E GF + ++ D +E ++
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR- 688
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
++ G P ++ + +I + R DA I ++M+ GI PDV+ Y + A+
Sbjct: 689 -EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+ + + M+ G P+ TYN ++G CK N+ DEA V+ + L
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 8/287 (2%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ ++R+ +A +L M++ GF + ++++ LC ++ +A+ + +MR+
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR--NLECGKAVSLLREMRR 170
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
P V + +IR + + AL + N+MK G +V + I++ G K
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG---K 227
Query: 318 LDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+DE EM +GL D+ Y I G C ++D + D +++ G P +T NT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ C+ G L +A + + M +GV N++TY ++DGL G + EA LL M++K
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + T++ II +C+ GL+ +A+E+++ + + P + LL
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 154/296 (52%), Gaps = 11/296 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +I C + ++ A+++ N M G ++I + C+ + EA+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD--EAMGFLK 236
Query: 254 DMRKLGFCPGVMDFTDMIRFLV---KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+M+ +G ++ +T +IR + +RG AL+ +++ + G P + Y ++ G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRG-KALF--DEVLERGDSPCAITYNTLIRGFC 293
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + E+F+ M+ G+ P+VYTY I+GLC K EA+Q+++ MI+ +PN V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N ++ LC+ G ++ A +++ M + + TY I+L GL K ++ EAS LL M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 431 LKKCFY--PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 484
LK Y P +++ +I +C++ +++AL++ +V K G R +LL+S
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK-LGAGDRVTTNILLNS 468
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 2/266 (0%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
+L+ LCR AV +L M + D + +I CE ++ +AL + +M+
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE--KALELANEMK 204
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
G ++ + +I K + +A+ L +MK G++ D+V YT ++ G G+
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ LFDE+L G P TYN I G CK ++ EA +I + MI+ G +PNV T L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
LC G +A ++ M K E N TY I+++ L + +A ++E M K+
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 437 PRSSTFDNIICCMCQKGLINEALELM 462
P + T++ ++ +C KG ++EA +L+
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLL 410
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++I+ LC+ V AV+I+ M + D ++++ LC + D+ A L+
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
P V+ + +I L KE R AL I + + + D V I+L+ + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D K EL+ ++ ++ + TY I+G CK ++ A ++ M +P+V N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
LL +LC+ G L +A + +EM ++ ++ IM+DG + +I A LL M +
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ +I + G ++EA+ K+V F P A +++L
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL--IISSLCEQN 241
+ + R + T+ +L+ LC +D A K+L M++D D + S +I LC++N
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 242 DVTSAEALVVWGDM-RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ +AL ++ + KLG V ++ +K A+ + Q+ I +
Sbjct: 439 RL--HQALDIYDLLVEKLGAGDRVTTNI-LLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
YT ++ G G L +M V L P V+ YN ++ LCK+ +D+A ++ + M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ P+VV+ N ++ +AGD+ A+ ++ M G+ +L TY +++ + +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
EA ++M+ F P + D+++ +G ++ EL+KK+V K
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ LI LC+ R+ A+ I + ++E D +++++S + DV +A+ +W
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN--KAMELWK 483
Query: 254 DMRKL--------------GFC---------------------PGVMDFTDMIRFLVKEE 278
+ GFC P V D+ ++ L KE
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 279 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 338
A + +M++D PDVV + I++ G + GD + L M GL PD++TY+
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 339 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
IN K +DEAI D M+ G +P+ C+++L G+ K ++K++ K
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Query: 399 GVELN 403
+ L+
Sbjct: 664 DIVLD 668
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA------- 246
+F +LI C ++ +++ + + GF D + ++ LC ++ ++ A
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 247 ------EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
EA+ ++ M ++G P V+ F +I L E R ++A ++N+M G+ DVV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++G+ GD L +M + PDV Y+ I+ LCK +A + M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
++ G PNV T N ++ C G S A+ ++++M + + ++ T+ ++ V + ++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
EA L +EML +C +P + T++++I C+ ++A
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 17/299 (5%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+I R+ R D A+ + M L+ +++I C+ + ++ + L +G + K
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTK 169
Query: 258 LGFCPGVMDFTDMIRFLVKEER---------------GMDALYILNQMKQDGIKPDVVCY 302
LGF P V+ F ++ L E+R ++A+ + +QM + G+ P V+ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++G+ EG ++ L ++M+ GL DV TY +NG+CK A+ ++ M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
KP+VV + ++ LC+ G S A+ + EM KG+ N+ TY M+DG +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A LL +M+++ P TF+ +I ++G + EA +L +++ + P + +++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 21/303 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGF-------------GLDGKICSL--IISSLC 238
TF L+ LC R+ A+ + M+E GF GL + + +I+ LC
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ V A ALV M G V+ + ++ + K AL +L++M++ IKPD
Sbjct: 238 LEGRVLEAAALV--NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
VV Y+ ++ + +G + LF EML G+ P+V+TYN I+G C + +A +++
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
MI+ P+V+T N L+ A + G L +A+ + EM + + + TY M+ G
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
+A + + M P TF+ II C+ ++E ++L+++I + +
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 479 ALL 481
L+
Sbjct: 472 TLI 474
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LISA + ++ A K+ + M+ D + +I C+ N A+
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----- 422
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M L P V+ F +I + +R + + +L ++ + G+ + Y ++ G
Sbjct: 423 -MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF EM+ G+ PD T N+ + G C+ K++EA+++ + + + V N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ +C+ + +A + + + GVE ++ TY +M+ G GK+ I +A++L +M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
P +ST++ +I + G I++++EL+ ++ + F+ A
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+L K + I+ + + +I LC+
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCK--------------------------------- 308
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
D ++A ++ +M + G P V + MI R DA +L M + I P
Sbjct: 309 ----DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
DV+ + ++S V EG + ++L DEML + PD TYN I G CK N+ D+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
D M P+VVT NT++ C A + + +++E+ +G+ N TY ++ G
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ A L +EM+ P + T + ++ C+ + EALEL + I
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +I CR +RVD +++L + G + + +I CE +++ +A+ L +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQ 491
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G CP + ++ + E+ +AL + ++ I D V Y I++ G+
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF + + G+ PDV TYNV I+G C ++ + +A + M G +P+ T N
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
TL+ +AG++ K+ ++ EM G + T +++ D
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
L+ +M + + ++Y++N+ I C +K+ ++ + KLG +P+VVT NTLL LC
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 381 EAGDLSKAK---GVMKEMGL--------KGVELNLH----TYRIMLDGLVGKAEIGEASL 425
+S+A G M E G + VE+ L T+ +++GL + + EA+
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL---- 481
L+ +M+ K + T+ I+ MC+ G AL L+ K+ P + A++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 482 ---LHSGSDLTYSETTFAGL 498
HS + +SE G+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI 327
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 6/284 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E TF +L+ C+ D +++LN M G + I + I+SS C + +E +V
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 241
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD---GI-KPDVVCYTIVLS 307
MR+ G P ++ F I L KE + +DA I + M+ D G+ +P+ + Y ++L
Sbjct: 242 --KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G G LF+ + + + +YN+++ GL + K EA ++ M G P
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
++ + N L+ LC+ G LS AK ++ M GV + TY +L G ++ A LL
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
+EM++ P + T + ++ + + G I+EA EL++K+ K +
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 137/274 (50%), Gaps = 14/274 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T +L+ +L ++ R+ A ++L M E G+GLD C++I+ LC ++ A +V
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV--K 490
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
MR G + + + LV + + ++ PD++ Y+ +L+G+ G
Sbjct: 491 GMRVHG-SAALGNLGNSYIGLVDD-----------SLIENNCLPDLITYSTLLNGLCKAG 538
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + LF EM+ L PD YN++I+ CKQ K+ A +++ M K GC ++ T N
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ L + + G+M EM KG+ N+ TY + L ++ +A+ LL+EM++K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
P +F +I C+ + A E+ + V+
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 194/480 (40%), Gaps = 90/480 (18%)
Query: 81 CDPTPNAYYF--LIKTLVNTSHLQDIPPVLDHLERVEKFETP-EFIFVYLIRFY---GLA 134
C P Y F LI+ L ++S + + D E EK P EF F L+R Y GL
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFD--EMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 135 DR---IQDAVDLFFRIPRFRCTPTVXXX------XXXXXXXXXXXXXXXMVPQILLKSQH 185
D+ + +A++ F +P T+ +VP I+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV----- 253
Query: 186 MKIRIEESTFRVLISALCRIRRVDYAVKILNCM-IEDGFGL---DGKICSLIISSLC--- 238
TF ISALC+ +V A +I + M +++ GL + +L++ C
Sbjct: 254 --------TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Query: 239 -------------EQNDVTSAEALVVW-----------------GDMRKLGFCPGVMDFT 268
E +D+ S ++ +W M G P + +
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
++ L K DA I+ MK++G+ PD V Y +L G + G L EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
+P+ YT N+ ++ L K ++ EA +++ M + G + VTCN ++ LC +G+L KA
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 389 KGVMKEMGLKG-------------------VELN----LHTYRIMLDGLVGKAEIGEASL 425
++K M + G +E N L TY +L+GL EA
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
L EM+ + P S ++ I C++G I+ A ++K + K + +L+L G
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 153/310 (49%), Gaps = 7/310 (2%)
Query: 177 PQI-LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
PQ L++S+ + + + +L+ + + RRV++ + M+ G +L+I
Sbjct: 96 PQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIR 155
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
+LC+ + V +A L + +M + G P F ++R K L +LN M+ G+
Sbjct: 156 ALCDSSCVDAAREL--FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
P+ V Y ++S EG +++ ++M GL+PD+ T+N I+ LCK+ KV +A +
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 356 IVDSM---IKLGC-KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 411
I M LG +PN +T N +L C+ G L AK + + + +L +Y I L
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
GLV + EA +L++M K P +++ ++ +C+ G++++A ++ +
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 472 PGARAWEALL 481
P A + LL
Sbjct: 394 PDAVTYGCLL 403
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 25/311 (8%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +L+ LC++ + A I+ M +G D ++ C V +A++L+
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ-- 420
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + P ++ L K R +A +L +M + G D V I++ G+ G
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 314 DYVKLDELFDEMLVLG-----------------------LIPDVYTYNVYINGLCKQNKV 350
+ K E+ M V G +PD+ TY+ +NGLCK +
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
EA + M+ +P+ V N + C+ G +S A V+K+M KG +L TY +
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ GL K +I E L++EM +K P T++ I +C+ + +A L+ +++ K+
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 471 APGARAWEALL 481
AP +++ L+
Sbjct: 661 APNVFSFKYLI 671
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 13/291 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L++ LC+ R A + M+ + D ++ I C+Q ++SA V
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA--FRVLK 583
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM K G + + +I L + + + ++++MK+ GI P++ Y + + EG
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ-YLCEG 642
Query: 314 DYVK-LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ V+ L DEM+ + P+V+++ I CK D A ++ ++ + + C
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLY 701
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+ + L AG L KA +++ + +G EL Y+ +++ L K E+ AS +L +M+
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKI--------VAKSFAPGAR 475
+ + + +I + + G EA K+ VA P AR
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNAR 812
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 144/287 (50%), Gaps = 6/287 (2%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRI--RRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
Q +LKSQ R STF +L+S CR + ++LN M+ +G D + +
Sbjct: 109 QHILKSQP-NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-G 294
SLCE V A+ L+ ++ + P + +++ L K + +++M+ D
Sbjct: 168 SLCETGRVDEAKDLM--KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+KPD+V +TI++ + + + L ++ G PD + YN + G C +K EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M + G +P+ +T NTL+ L +AG + +A+ +K M G E + TY +++G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
K E A LLEEM + P T++ ++ +C+ L+++ +EL
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 116/232 (50%), Gaps = 5/232 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICS--LIISSLCEQNDVTSAEALVV 251
T+ L+ LC+ + + + ++ M +D F + + S ++I ++C ++ EA+ +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDD-FDVKPDLVSFTILIDNVCNSKNLR--EAMYL 252
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ GF P + +++ +G +A+ + +MK++G++PD + Y ++ G+
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G + M+ G PD TY +NG+C++ + A+ +++ M GC PN T
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT 372
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
NTLL LC+A + K + + M GV+L + Y ++ LV ++ EA
Sbjct: 373 YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 139/302 (46%), Gaps = 12/302 (3%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
+ LL+ +++ + +TF VL CR+R A+K+L MIE G + I +
Sbjct: 254 EALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTF 313
Query: 238 CEQNDVTSAEALVVWGDMRKLGF-CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
C+ V A L + + P F MI L K ++ + ++ +M G
Sbjct: 314 CQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCL 373
Query: 297 PDVVCYTIVLSGI-VAEGDYVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
PDV Y V+ G+ +AE K+DE + DEM G PD+ TYN ++ LC+ K DE
Sbjct: 374 PDVSTYKDVIEGMCMAE----KVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDE 429
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
A+++ M++ C P+V T N L+ E D A EM + ++ TY M++
Sbjct: 430 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 413 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG---LINEALELMKKIVAKS 469
GL EA LLEE++ K FD+ + + + G I++ E MKK S
Sbjct: 490 GLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHS 549
Query: 470 FA 471
A
Sbjct: 550 MA 551
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 134/296 (45%), Gaps = 18/296 (6%)
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEA 248
+ + FR++I L ++R + V +++ ++E I+ CE+ +T +
Sbjct: 173 KYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE------------ILRKYCERY-LTHVQK 219
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+R + P + F ++ L K + +L +M+ +KPD + ++ G
Sbjct: 220 FAKRKRIR-VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFG 277
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
D K +L +EM+ G P+ +TY I+ C+ VDEA + D MI G +
Sbjct: 278 WCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 369 VVTCNT---LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
T T ++ AL + + ++ M G ++ TY+ +++G+ ++ EA
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L+EM K + P T++ + +C+ +EAL+L ++V AP + + L+
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
LIS LC+ + A+++ + GF +D + + ++ LCE + EA + ++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD--EAFRIQKEIL 532
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
G + + +I +++ +A L++M + G+KPD Y+I++ G+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ + +D+ G++PDVYTY+V I+G CK + +E + D M+ +PN V N L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
A C +G LS A + ++M KG+ N TY ++ G+ + + EA LL EEM +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 494
P + +I + G + + L++++ +K+ P + ++ D +E +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
++ ++ LIS C +++D A L+ M++ G D S++I L N V EA+
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV--EEAI 595
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
W D ++ G P V ++ MI K ER + ++M ++P+ V Y ++
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G EL ++M G+ P+ TY I G+ ++V+EA + + M G +PNV
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
L+ + G + K + +++EM K V N TY +M+ G + EAS LL E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M +K P S T+ I ++G + LE K +++A W L+
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 824
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 211 AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA-EALVVWGDMRKLGFCPGVMDFTD 269
A+ + + G C+++++SL N+ EA D+ G P V FT
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF----DVVCKGVSPDVYLFTT 265
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEML 326
I K + +A+ + ++M++ G+ P+VV + V+ G+ G Y DE F ++M+
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY---DEAFMFKEKMV 322
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
G+ P + TY++ + GL + ++ +A ++ M K G PNV+ N L+ + EAG L+
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
KA + M KG+ L TY ++ G + A LL+EML F +F ++I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGA 474
C +C + + AL + +++ ++ +PG
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ + ST+ LI C+ + D A ++L M+ GF ++ + +I LC SA
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
V G+M PG T +I L K + AL + Q G D +L
Sbjct: 456 RFV--GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 308 GIVAEGDYVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
G+ G KLDE F E+L G + D +YN I+G C + K+DEA +D M+K G
Sbjct: 514 GLCEAG---KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
KP+ T + L+ L + +A + G+ +++TY +M+DG E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+EM+ K P + ++++I C+ G ++ ALEL + + K +P + + +L+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL + + G+ P I+L+ +V ++ K E FD ++ G+ PDVY + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
CK KV+EA+++ M + G PNVVT NT++ L G +A ++M +G+E
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
L TY I++ GL IG+A +L+EM KK F P ++N+I + G +N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 463 KKIVAKSFAPGARAWEALL 481
+V+K + + + L+
Sbjct: 389 DLMVSKGLSLTSSTYNTLI 407
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL--CEQNDVTSAEALVVW 252
F I+A C+ +V+ AVK+ + M E G + + +I L C + D EA +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD----EAFMFK 318
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M + G P ++ ++ +++ L + +R DA ++L +M + G P+V+ Y ++ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G K E+ D M+ GL TYN I G CK + D A +++ M+ +G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+++ LC A + EM L+ + ++ GL + +A L + L
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
K F + T + ++ +C+ G ++EA + K+I+ +
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 159/435 (36%), Gaps = 77/435 (17%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADRIQDAV 141
P+ L+ +LV + Q D V K +P+ ++F I + ++++AV
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD---VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 142 DLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISA 201
LF ++ P V TF +I
Sbjct: 281 KLFSKMEEAGVAPNVV------------------------------------TFNTVIDG 304
Query: 202 LCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFC 261
L R D A M+E G S+++ L + +A V +M K GF
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI--GDAYFVLKEMTKKGFP 362
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ + ++I ++ A+ I + M G+ Y ++ G G + L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 322 FDEMLVLG-----------------------------------LIPDVYTYNVYINGLCK 346
EML +G + P I+GLCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
K +A+++ + G + T N LL LCEAG L +A + KE+ +G ++ +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
Y ++ G GK ++ EA + L+EM+K+ P + T+ +IC + + EA++
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 467 AKSFAPGARAWEALL 481
P + ++
Sbjct: 603 RNGMLPDVYTYSVMI 617
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
LIS LC+ + A+++ + GF +D + + ++ LCE + EA + ++
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD--EAFRIQKEIL 532
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
G + + +I +++ +A L++M + G+KPD Y+I++ G+
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ + +D+ G++PDVYTY+V I+G CK + +E + D M+ +PN V N L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
A C +G LS A + ++M KG+ N TY ++ G+ + + EA LL EEM +
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 494
P + +I + G + + L++++ +K+ P + ++ D +E +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
++ ++ LIS C +++D A L+ M++ G D S++I L N V EA+
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV--EEAI 595
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
W D ++ G P V ++ MI K ER + ++M ++P+ V Y ++
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G EL ++M G+ P+ TY I G+ ++V+EA + + M G +PNV
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
L+ + G + K + +++EM K V N TY +M+ G + EAS LL E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M +K P S T+ I ++G + LE K +++A W L+
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 824
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 211 AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA-EALVVWGDMRKLGFCPGVMDFTD 269
A+ + + G C+++++SL N+ EA D+ G P V FT
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF----DVVCKGVSPDVYLFTT 265
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEML 326
I K + +A+ + ++M++ G+ P+VV + V+ G+ G Y DE F ++M+
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY---DEAFMFKEKMV 322
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
G+ P + TY++ + GL + ++ +A ++ M K G PNV+ N L+ + EAG L+
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
KA + M KG+ L TY ++ G + A LL+EML F +F ++I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGA 474
C +C + + AL + +++ ++ +PG
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ + ST+ LI C+ + D A ++L M+ GF ++ + +I LC SA
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
V G+M PG T +I L K + AL + Q G D +L
Sbjct: 456 RFV--GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 308 GIVAEGDYVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
G+ G KLDE F E+L G + D +YN I+G C + K+DEA +D M+K G
Sbjct: 514 GLCEAG---KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
KP+ T + L+ L + +A + G+ +++TY +M+DG E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+EM+ K P + ++++I C+ G ++ ALEL + + K +P + + +L+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL + + G+ P I+L+ +V ++ K E FD ++ G+ PDVY + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
CK KV+EA+++ M + G PNVVT NT++ L G +A ++M +G+E
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
L TY I++ GL IG+A +L+EM KK F P ++N+I + G +N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 463 KKIVAKSFAPGARAWEALL 481
+V+K + + + L+
Sbjct: 389 DLMVSKGLSLTSSTYNTLI 407
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 6/277 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL--CEQNDVTSAEALVVW 252
F I+A C+ +V+ AVK+ + M E G + + +I L C + D EA +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD----EAFMFK 318
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M + G P ++ ++ +++ L + +R DA ++L +M + G P+V+ Y ++ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G K E+ D M+ GL TYN I G CK + D A +++ M+ +G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+++ LC A + EM L+ + ++ GL + +A L + L
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
K F + T + ++ +C+ G ++EA + K+I+ +
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 159/435 (36%), Gaps = 77/435 (17%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPE-FIFVYLIRFYGLADRIQDAV 141
P+ L+ +LV + Q D V K +P+ ++F I + ++++AV
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD---VVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 142 DLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISA 201
LF ++ P V TF +I
Sbjct: 281 KLFSKMEEAGVAPNVV------------------------------------TFNTVIDG 304
Query: 202 LCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFC 261
L R D A M+E G S+++ L + +A V +M K GF
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI--GDAYFVLKEMTKKGFP 362
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ + ++I ++ A+ I + M G+ Y ++ G G + L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 322 FDEMLVLG-----------------------------------LIPDVYTYNVYINGLCK 346
EML +G + P I+GLCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
K +A+++ + G + T N LL LCEAG L +A + KE+ +G ++ +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
Y ++ G GK ++ EA + L+EM+K+ P + T+ +IC + + EA++
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 467 AKSFAPGARAWEALL 481
P + ++
Sbjct: 603 RNGMLPDVYTYSVMI 617
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
L+KS++++I IE TF +LI R AV N M + G D S++IS+L
Sbjct: 176 LMKSRNVEISIE--TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSR 233
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
+ + A++ D K F P V+ +T+++R + +A + +MK GI+P+V
Sbjct: 234 KRRASEAQSFF---DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNV 290
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
Y+IV+ + G + ++F +ML G P+ T+N + K + ++ +Q+ +
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 419
M KLGC+P+ +T N L+ A C +L A V+ M K E+N T+ + + K +
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
+ A + +M++ P + T++ ++ + L++ K++ K P +
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470
Query: 480 LL 481
L+
Sbjct: 471 LV 472
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
++R+ D A +++ M + + +++I ++EA+ + M G P
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAG--LASEAVHCFNRMEDYGCVPD 220
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 323
+ F+ +I L ++ R +A + +K D +PDV+ YT ++ G G+ + +++F
Sbjct: 221 KIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
EM + G+ P+VYTY++ I+ LC+ ++ A + M+ GC PN +T N L+ +AG
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
K V +M G E + TY +++ + A +L M+KK +STF+
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
I + +K +N A + K++ P + L+
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 171/406 (42%), Gaps = 42/406 (10%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVD 142
P+ Y L+ L H + ++ +E+ + +F +I + + A+
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEK-NGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 143 LFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISAL 202
+F ++ C PT STF LI
Sbjct: 411 IFEKMKESGCKPTA------------------------------------STFNTLIKGY 434
Query: 203 CRIRRVDYAVKILNCMIEDG-FGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFC 261
+I +++ + ++L+ M+ D + + C++++ + C Q + A +V M+ G
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVY--KMQSYGVK 492
Query: 262 PGVMDFTDMIRFLVKEERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
P V+ F + + + A I+ +M + +KP+V +++G EG +
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
F M LG+ P+++ +N I G N +D ++VD M + G KP+VVT +TL+ A
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 381 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 440
GD+ + + + +M G++ ++H + I+ G E +A +L +M K P
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 441 TFDNIICCMCQKGLINEALELMKKIVA-KSFAPGARAWEALLLHSG 485
+ II C G + +A+++ KK+ +P +E L+ G
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFG 718
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 154/358 (43%), Gaps = 5/358 (1%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
+ + K C PT + + LIK L++ +LD + R E + + L++ +
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
+I++A ++ +++ + P V I+ + H K++
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
T +++ C +++ A++ M E G + + + +I ND+ +V
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD 590
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
M + G P V+ F+ ++ I M + GI PD+ ++I+ G
Sbjct: 591 L--MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYAR 648
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVV 370
G+ K +++ ++M G+ P+V Y I+G C ++ +A+Q+ M + G PN+
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLT 708
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLL 426
T TL+ EA KA+ ++K+M K V T +++ DG +G + +A+ L
Sbjct: 709 TYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSNDANTL 766
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 118/240 (49%), Gaps = 8/240 (3%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA ++ + + G P ++ +T ++ L +++ L ++++++++G+KPD + + ++
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-C 365
+ G+ + ++F++M G P T+N I G K K++E+ +++D M++
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-- 423
+PN TCN L+ A C + +A ++ +M GV+ ++ T+ + A IG
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY---ARIGSTCT 513
Query: 424 --SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+++ ML P T I+ C++G + EAL ++ P + +L+
Sbjct: 514 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
C V T ++ L++ R +A I N + ++G KP ++ YT +++ + + + L
Sbjct: 316 CGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS 375
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
L ++ GL PD +N IN + +D+A++I + M + GCKP T NTL+
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 381 EAGDLSKAKGVMKEMGLKG--VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
+ G L ++ ++ +M L+ ++ N T I++ + +I EA ++ +M P
Sbjct: 436 KIGKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 439 SSTFDNI 445
TF+ +
Sbjct: 495 VVTFNTL 501
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 149/288 (51%), Gaps = 3/288 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+R +++ALC+ + A ++ +++ GF LD I + ++ C ++ +AL V+
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLR--DALKVFDV 255
Query: 255 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K C P + ++ +I L + R +A + +QM + G +P YT+++ + G
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K LFDEM+ G P+V+TY V I+GLC+ K++EA + M+K P+V+T N
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ C+ G + A ++ M + + N+ T+ +++GL + +A LL+ ML
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P +++ +I +C++G +N A +L+ + P + A++
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKIC-SLIISSLCEQNDVTSAEALVVWGDMR 256
L+ CR + A+K+ + M ++ + S++I LCE + EA + M
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL--EEAFGLKDQMG 293
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+ G P +T +I+ L +RG+ A + ++M G KP+V YT+++ G+ +G
Sbjct: 294 EKGCQPSTRTYTVLIKALC--DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + + +M+ + P V TYN ING CK +V A +++ M K CKPNV T N
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ LC G KA ++K M G+ ++ +Y +++DGL + + A LL M C
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM--NC 469
Query: 435 F--YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
F P TF II C++G + A + ++ K +
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 12/414 (2%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
L D C P+ Y LIK L + + + D E + + P + Y +
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD--EMIPRGCKPN-VHTYTVLID 344
Query: 132 GLA--DRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVP--QILLKSQHMK 187
GL +I++A + ++ + R P+V +VP ++L +
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR---VVPAFELLTVMEKRA 401
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ TF L+ LCR+ + AV +L M+++G D +++I LC + + +A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
L+ M P + FT +I K+ + A L M + GI D V T ++
Sbjct: 462 KLL--SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G+ G + + ++ + ++ ++ NV ++ L K KV E + ++ + KLG P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+VVT TL+ L +GD++ + +++ M L G N++ Y I+++GL + EA LL
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M P T+ ++ G ++ ALE ++ +V + + R + +LL
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 8/302 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VLI ALC +D A + + MI G + +++I LC + A V
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG--VCR 360
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K P V+ + +I K+ R + A +L M++ KP+V + ++ G+ G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K L ML GL PD+ +YNV I+GLC++ ++ A +++ SM +P+ +T
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ A C+ G A + M KG+ L+ T ++DG+ + +A +LE ++K
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 434 CFYPRSSTFDNIICCMCQKGL-INEALELMKKIVAKSFAPGARAWEAL---LLHSGSDLT 489
+ N+I M KG + E L ++ KI P + L L+ SG D+T
Sbjct: 541 RILTTPHSL-NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG-DIT 598
Query: 490 YS 491
S
Sbjct: 599 GS 600
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 20/294 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF +I+A C+ + D A L M+ G LD + +I +C+ + +AL +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK--TRDALFILE 535
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ K+ ++ L K + + L +L ++ + G+ P VV YT ++ G++ G
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + + M + G +P+VY Y + INGLC+ +V+EA +++ +M G PN VT
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-------GKAEIGEASLL 426
++ G L +A ++ M +G ELN Y +L G V E + +
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
Query: 427 LEEMLKKCFYPRSSTFDNIICC-----------MCQKGLINEALELMKKIVAKS 469
L E +C S + + C +C++G +E+ +L++ ++ +
Sbjct: 716 LRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 172/443 (38%), Gaps = 80/443 (18%)
Query: 77 KSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADR 136
K +C P +Y LI L L++ + D + EK P Y + L DR
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG--EKGCQPS-TRTYTVLIKALCDR 314
Query: 137 --IQDAVDLFFR-IPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES 193
I A +LF IPR C P V
Sbjct: 315 GLIDKAFNLFDEMIPR-GCKPNV------------------------------------H 337
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VLI LCR +++ A + M++D + +I+ C+ V A L+
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV- 396
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K P V F +++ L + + A+++L +M +G+ PD+V Y +++ G+ EG
Sbjct: 397 -MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+L M + PD T+ IN CKQ K D A + M++ G + VT
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 374 TLLGALCEAGD-----------------------------LSKAKGVMKEMGL------K 398
TL+ +C+ G LSK V +E+ +
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
G+ ++ TY ++DGL+ +I + +LE M P + II +CQ G + EA
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
+L+ + +P + ++
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMV 658
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 47/247 (19%)
Query: 277 EERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGD-----YVKLDELFDEMLVLGL 330
E+ + +Y +++++ G + + CY+ +L + A+ D YV + + V+G+
Sbjct: 137 EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSL-AKLDLGFLAYVTYRRMEADGFVVGM 195
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-------------------------- 364
I Y +N LCK + A + ++K+G
Sbjct: 196 ID----YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALK 251
Query: 365 ----------CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
C PN V+ + L+ LCE G L +A G+ +MG KG + + TY +++ L
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+ I +A L +EM+ + P T+ +I +C+ G I EA + +K+V P
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 475 RAWEALL 481
+ AL+
Sbjct: 372 ITYNALI 378
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 26/304 (8%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I I+ T+ +IS LC D A + L+ M++ G D + +I C+ + A+
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216
Query: 248 ALV--------------------------VWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
ALV + DM GF P V+ F+ +I L K + +
Sbjct: 217 ALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+ +L +M++ + P+ V YT ++ + Y L+ +M+V G+ D+ Y V +
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
+GL K + EA + +++ PNVVT L+ LC+AGDLS A+ ++ +M K V
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
N+ TY M++G V K + EA LL +M + P T+ +I + + G A+EL
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 462 MKKI 465
K++
Sbjct: 457 SKEM 460
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 15/312 (4%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
IL + M+I +T+R+ + + +R D K ++ G L ++ + +I++L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ + +A +V GDM GF P + F ++ AL + M + GI P
Sbjct: 689 CKLG--MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+V Y ++ G+ G ++D+ EM G+ PD +TYN I+G K + ++ I
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-- 415
MI G P T N L+ G + +A+ ++KEMG +GV N TY M+ GL
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Query: 416 ---------GKA-EIGEASLLLEEML-KKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
KA + EA LL+EM+ +K + P + T I + G+ +A +K+
Sbjct: 867 CTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Query: 465 IVAKSFAPGARA 476
K A + +
Sbjct: 927 CYKKKNARSSNS 938
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 145/288 (50%), Gaps = 12/288 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
VLI + C++ R+ +A+ +L + +D + +IS LCE + EA
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHG--LADEAYQFLS 185
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K+G P + + +I K + A +++++ + +++ +TI+LS
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYY--- 238
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ++E + +M++ G PDV T++ IN LCK KV E ++ M ++ PN VT
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ +L +A A + +M ++G+ ++L Y +++DGL ++ EA + +L+
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++ +C+ G ++ A ++ +++ KS P + +++
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 194 TFRVLISALCRIRRV--DYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
++ VLIS + + +V D+A K M E G D +++++S +Q D S L +
Sbjct: 541 SYNVLISGMLKFGKVGADWAYK---GMREKGIEPDIATFNIMMNSQRKQGD--SEGILKL 595
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
W M+ G P +M ++ L + + +A++ILNQM I P++ Y I L
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD---T 652
Query: 312 EGDYVKLDELFD--------------------------------------EMLVLGLIPD 333
+ + D +F +M G IPD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
T+N ++G + V +A+ M++ G PNV T NT++ L +AG + + +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 394 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
EM +G+ + TY ++ G + + + EM+ P++ST++ +I G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 454 LINEALELMKKIVAKSFAPGARAW 477
+ +A EL+K++ + +P +
Sbjct: 833 KMLQARELLKEMGKRGVSPNTSTY 856
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 153/338 (45%), Gaps = 43/338 (12%)
Query: 183 SQHMK-IRIEESTF--RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
S+ M+ I +EE+ + L++ L RI R+ ++ M+ G LD + +I +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEER-GMDALYILNQMKQDGIKPD 298
D +A A +M++ G V+ + +I ++K + G D Y M++ GI+PD
Sbjct: 517 GGDEEAALAWAE--EMQERGMPWDVVSYNVLISGMLKFGKVGADWAY--KGMREKGIEPD 572
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+ + I+++ +GD + +L+D+M G+ P + + N+ + LC+ K++EAI I++
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 359 SMIKLGCKPNVVTC-----------------------------------NTLLGALCEAG 383
M+ + PN+ T NTL+ LC+ G
Sbjct: 633 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
KA VM +M +G + T+ ++ G + + +A M++ P +T++
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
II + GLI E + + ++ ++ P + AL+
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG---DYVKLDELFD 323
F + R + ER A L+ M G+ PD + ++ G D V L ++
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL--IYS 118
Query: 324 EMLVLGLIPDVY--------------------------------TYNVYINGLCKQNKVD 351
+M+ G+ PDV+ TYN I+GLC+ D
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLAD 178
Query: 352 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 411
EA Q + M+K+G P+ V+ NTL+ C+ G+ +AK ++ E+ ELNL T+ I+L
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILL 234
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
I EA +M+ F P TF +II +C+ G + E L++++ S
Sbjct: 235 SSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 472 PGARAWEALL 481
P + L+
Sbjct: 292 PNHVTYTTLV 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+L + + M + T+ L+ +L + +A+ + + M+ G +D + ++++ L
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ D+ AE + + + P V+ +T ++ L K A +I+ QM + + P+
Sbjct: 341 KAGDLREAEK--TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
VV Y+ +++G V +G + L +M ++P+ +TY I+GL K K + AI++
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
M +G + N + L+ L G + + KG++K+M KGV L+ Y ++D
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 40/275 (14%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T +L+S+ + ++ A + M+ GF D S II+ LC+ V E ++
Sbjct: 229 THTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVL--EGGLLLR 283
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M ++ P + +T ++ L K AL + +QM GI D+V YT+++ G+ G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + ++ F +L +P+V TY ++GLCK + A I+ M++ PNVVT +
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 374 TLLGALCEAGDLSKAKGVM-----------------------------------KEMGLK 398
+++ + G L +A ++ KEM L
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
GVE N + +++ L I E L+++M+ K
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 133/285 (46%), Gaps = 3/285 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I ++ + VL+ L + + A K ++ED + + ++ LC+ D++SAE
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
++ M + P V+ ++ MI VK+ +A+ +L +M+ + P+ Y V+
Sbjct: 385 FIIT--QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G+ G EL EM ++G+ + Y + +N L + ++ E +V M+ G
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+ + +L+ + GD A +EM +G+ ++ +Y +++ G++ ++G A
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAY 561
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ M +K P +TF+ ++ ++G L+L K+ + P
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 5/292 (1%)
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
SQ R S+ +LI L R R + +L G+ L G+I + +I E
Sbjct: 75 SQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAK- 133
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVV 300
+ L + M + F P ++ LV RG A + + G+ P+
Sbjct: 134 -LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV-SHRGYLQKAFELFKSSRLHGVMPNTR 191
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++ D +LF +ML ++PDV +Y + I G C++ +V+ A++++D M
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ G P+ ++ TLL +LC L +A ++ M LKG +L Y M+ G +
Sbjct: 252 LNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRA 311
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+A +L++ML P S ++ +I +C +G+ +E + ++++++K F+P
Sbjct: 312 MDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
IF YLI+ Y A + + F+++ F TP ++
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
S+ + ++ +L+ A C + A ++ M+E D ++I C +
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
V A L+ DM GF P + +T ++ L ++ + +A +L +MK G PD+V Y
Sbjct: 241 VNGAMELL--DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
++ G E + ++ D+ML G P+ +Y I GLC Q DE + ++ MI
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
G P+ N L+ C G + +A V++ + G L+ T+ +++ + + E +
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Query: 423 ASLLLEEMLKK 433
L LE+ +K+
Sbjct: 419 IKLFLEDAVKE 429
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 1/307 (0%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII 234
++ +L K + + F LI + + + M+E F K + I+
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
L +A ++ R G P + +++ + A + +M +
Sbjct: 162 DVLVSHRGYLQ-KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+ PDV Y I++ G +G EL D+ML G +PD +Y +N LC++ ++ EA
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+++ M GC P++V NT++ C A+ V+ +M G N +YR ++ GL
Sbjct: 281 KLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+ E LEEM+ K F P S + ++ C G + EA ++++ ++ +
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 400
Query: 475 RAWEALL 481
WE ++
Sbjct: 401 DTWEMVI 407
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNK-VDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
F +ML P N ++ L + +A ++ S G PN + N L+ A C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 381 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 440
DLS A + +M + V ++ +Y+I++ G K ++ A LL++ML K F P
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 441 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
++ ++ +C+K + EA +L+ ++ K P + ++L
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 8/278 (2%)
Query: 211 AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD--FT 268
++ + + GF + L++ L ++ A + + R G C + D F
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNG-CVKLQDRYFN 142
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-V 327
+IR +++ + MKQ GI P V+ + +LS ++ G +LFDEM
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
G+ PD YT+N ING CK + VDEA +I M C P+VVT NT++ LC AG +
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 388 AKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
A V+ M K ++ N+ +Y ++ G K EI EA L+ +ML + P + T++ +
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 446 ICCMCQKGLINEALELM--KKIVAKSFAPGARAWEALL 481
I + + +E +++ +FAP A + L+
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 165/402 (41%), Gaps = 45/402 (11%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKS 183
F LIR YG A Q++V LF + + +P+V
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ + + TF LI+ C+ VD A +I M D + II LC V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A ++ + P V+ +T ++R ++ +A+ + + M G+KP+ V Y
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 304 IVLSG----------------------------------IVAEGDYVKLD---ELFDEML 326
++ G I A D LD ++F EML
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK----LG---CKPNVVTCNTLLGAL 379
+ L PD +Y+V I LC +N+ D A + + + + LG CKP N + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
C G +A+ V +++ +GV+ + +Y+ ++ G + + A LL ML++ F P
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
T++ +I + + G A + +++++ S+ P A + ++L
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVL 541
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 7/291 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+++++ F LI + +VK+ M + G + ++S L ++ A
Sbjct: 134 VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 193
Query: 248 ALVVWGDMRKL-GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
L + +MR+ G P F +I K +A I M+ PDVV Y ++
Sbjct: 194 DL--FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 307 SGIVAEGDYVKLDELFDEML--VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
G+ G + ML + P+V +Y + G C + ++DEA+ + M+ G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVM--KEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
KPN VT NTL+ L EA + K ++ + T+ I++ +
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
A + +EML +P S+++ +I +C + + A L ++ K G
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 124/243 (51%), Gaps = 8/243 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL++ CR+R + A +I N MI+ G D ++++ L ++A+ ++
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR--KKSDAIKLFH 357
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---G 414
Query: 314 DYVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
KLD EL EM G PD TYN I + Q + A +I + MI+ +P++
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 474
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N ++ + A + + V +EM KG+ + ++Y +++ GL+G+ + EA LEEM
Sbjct: 475 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Query: 431 LKK 433
L K
Sbjct: 535 LDK 537
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
L+K KI +E T L+ +L R + + ++L +++ F + +++++ C
Sbjct: 254 LMKKYKFKIGVE--TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
++ EA +W DM G P ++ M+ L++ + DA+ + + MK G P+V
Sbjct: 311 VRNLI--EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNV 368
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
YTI++ + E FD+M+ GL PD Y I G Q K+D +++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGK 417
M + G P+ T N L+ + A + +M +E ++HT+ +++ +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
E+G A + EEM+KK P +++ +I + +G EA +++++ K
Sbjct: 489 YEMGRA--VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 18/288 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF + + A + AV I M + F + + + ++ SL A+ L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF--- 287
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
D K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ L ++KEM KG + TY ++ + + A+ + +M++
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF+ I + +A+++ G WE ++
Sbjct: 468 EIEPSIHTFNMI---------------MKSYFMARNYEMGRAVWEEMI 500
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ ++I C+ ++ A++ + M++ G D + + +I+ Q + + L+
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL--K 427
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M++ G P + +I+ + ++ A I N+M Q+ I+P + + +++
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+Y +++EM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 374 TLLGALCEAG 383
G
Sbjct: 548 KFAADFHRGG 557
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 3/235 (1%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
W R+ GF + M+ L K + + +L +M G+ + +TI + A
Sbjct: 184 WAAERQ-GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAA 241
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ K +F+ M V T N ++ L + K+ + Q++ +K PN++T
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMT 300
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
LL C +L +A + +M +G++ ++ + +ML+GL+ + +A L M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
K P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ LI+ LC ++ A+ + + M+ G + + +I+ C +ND+ EAL ++G
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC-KNDMLK-EALDMFG 390
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ G P + +I K + D + +M+++GI PDV Y +++G+ G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LFD++ GL PD+ T+++ + G C++ + +A ++ M K+G KP +T N
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 374 TLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
++ C+ G+L A + +M + + +N+ +Y ++L G K ++ +A++LL EML+
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 433 KCFYPRSSTFDNIICCMCQKGLI 455
K P T++ + M +G +
Sbjct: 570 KGLVPNRITYEIVKEEMVDQGFV 592
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 5/243 (2%)
Query: 231 SLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVK---EERGMDALYIL 287
+++I++LC+ + A V DM+ G P V+ + +I K + A +L
Sbjct: 227 NVVINALCKTGKMNKARD--VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 288 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 347
+M ++ + P++ + I++ G + + ++F EML + P+V +YN INGLC
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 348 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
K+ EAI + D M+ G +PN++T N L+ C+ L +A + + +G Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 408 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+++D +I + L EEM ++ P T++ +I +C+ G I A +L ++ +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 468 KSF 470
K
Sbjct: 465 KGL 467
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 222 GFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
G+ L C ++ +L ++N SA+ V+ +M + P V F +I L K +
Sbjct: 183 GYKLSALSCKPLMIALLKEN--RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSG---IVAEGDYVKLDELFDEMLVLGLIPDVYTYN 338
A ++ MK G P+VV Y ++ G + G K D + EM+ + P++ T+N
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 339 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
+ I+G K + + ++++ M+ KPNV++ N+L+ LC G +S+A + +M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
GV+ NL TY +++G + EA + + + P + ++ +I C+ G I++
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
L +++ + P + L+
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLI 443
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE-QNDVTS 245
KI+ TF V+I+ALC+ +++ A ++ M G + + +I C+ +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
+A V +M + P + F +I K++ ++ + +M +KP+V+ Y +
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
++G+ G + + D+M+ G+ P++ TYN ING CK + + EA+ + S+ G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
P N L+ A C+ G + + +EM +G+ ++ TY ++ GL I A
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
L +++ K P TF ++ C+KG +A L+K++ P
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 67/365 (18%)
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLD-------------G 227
+K +H R +E T+ ++I + RI + D AV + N MI +G L+ G
Sbjct: 261 MKKRH--CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 228 KIC-------SLIISSLCEQNDVTS--------AEALVVWGD------------------ 254
K+ S ++ + C N+ T AE +V D
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYL 378
Query: 255 ---MRKLGFCPGVMD-FTDMIRFLVKEERG---------------MDALYILNQMKQDGI 295
+ KLG F DM F VK ER ++A+ +L+++ + G+
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
D + Y V S + + +LF++M G PD++TYN+ I + +VDEAI
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
I + + + CKP++++ N+L+ L + GD+ +A KEM KG+ ++ TY +++
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ A L EEML K P T++ ++ C+ + G EA++L K+ + P +
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 476 AWEAL 480
+ L
Sbjct: 619 TYTVL 623
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
++A V+ ++R+ G + + ++ L K+E+ A + MK+ + D YTI+
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIM 276
Query: 306 LSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+ + G K DE LF+EM+ GL +V YN + L K VD+AIQ+ M++
Sbjct: 277 IRTM---GRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
GC+PN T + LL L G L + GV+ E+ + + +++Y ++ L + E
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSE 390
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
A L +M ++ +++ +C G EA+E++ KI K
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 138/328 (42%), Gaps = 49/328 (14%)
Query: 203 CRIRRVDYAVKILN-CMIEDGFGLDGKICSL---IISSLCEQNDVTSA------------ 246
C IRR + + I M+ D D K C + + C +++ T
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 247 -EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
EA+ ++ +M G V+ + +++ L K + A+ + ++M + G +P+ Y+++
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 306 LSGIVAEGDYVKLD--------------------------------ELFDEMLVLGLIPD 333
L+ +VAEG V+LD LF +M + +
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
+Y + LC K EAI+++ + + G + + NT+ AL + +S + +
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 394 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
+M G ++ TY I++ E+ EA + EE+ + P +++++I C+ + G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 454 LINEALELMKKIVAKSFAPGARAWEALL 481
++EA K++ K P + L+
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 7/295 (2%)
Query: 81 CDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDA 140
C P Y L+ LV L LD + + K + I+ YL+R + +A
Sbjct: 336 CRPNEYTYSLLLNLLVAEGQLVR----LDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEA 391
Query: 141 VDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLIS 200
LF + F + ++L K + + + + S
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI-EMLSKIHEKGVVTDTMMYNTVFS 450
Query: 201 ALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGF 260
AL +++++ + + M +DG D +++I+S +V EA+ ++ ++ +
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD--EAINIFEELERSDC 508
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
P ++ + +I L K +A +M++ G+ PDVV Y+ ++
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
LF+EMLV G P++ TYN+ ++ L K + EA+ + M + G P+ +T L
Sbjct: 569 LFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 346
L +K+ +K + Y +L + DY K +++ E+ G D++ YN+ ++ L K
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
K A Q+ + M K C+ + T ++ + G +A G+ EM +G+ LN+
Sbjct: 251 DEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
Y ++ L + +A + M++ P T+ ++ + +G
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 41/361 (11%)
Query: 119 TPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQ 178
TP +F L + + + ++A D F ++ + PTV + +
Sbjct: 167 TPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL-R 224
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+ + KI T +++S CR ++D +++L M GF + +I+ C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
E+ ++SA L + M K G P V+ F +I + + +A + +MK + P+
Sbjct: 285 EKGLLSSA--LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV- 357
V Y +++G +GD+ +++M+ G+ D+ TYN I GLCKQ K +A Q V
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 358 ----------------------------------DSMIKLGCKPNVVTCNTLLGALCEAG 383
SMI+ GC PN T N L+ A C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
D A V++EM + + L+ T + +GL + + LL+EM K F S F+
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES--FN 520
Query: 444 N 444
N
Sbjct: 521 N 521
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L +++ A M + GF + C+ +SSL Q V A L + +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA--LRFYRE 228
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
MR+ P ++ + + + +L M++ G + V Y +++G +G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+L + M GL P+V T+N I+G C+ K+ EA ++ M + PN VT NT
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ + GD A ++M G++ ++ TY ++ GL +A+ +A+ ++E+ K+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P SSTF +I C + + EL K ++ P + + L+
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 199 ISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKL 258
+S+L RVD A++ M + ++++S C + + + + DM +L
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD--KGIELLQDMERL 267
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
GF + + +I ++ AL + N M + G++P+VV + ++ G +
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
++F EM + + P+ TYN ING +Q + A + + M+ G + +++T N L+
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
LC+ KA +KE+ + + N T+ ++ G + L + M++ +P
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 487
TF+ ++ C+ + A ++++++V +S +R + L H G D
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 151/361 (41%), Gaps = 41/361 (11%)
Query: 119 TPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQ 178
TP +F L + + + ++A D F ++ + PTV + +
Sbjct: 167 TPR-VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL-R 224
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+ + KI T +++S CR ++D +++L M GF + +I+ C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
E+ ++SA L + M K G P V+ F +I + + +A + +MK + P+
Sbjct: 285 EKGLLSSA--LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV- 357
V Y +++G +GD+ +++M+ G+ D+ TYN I GLCKQ K +A Q V
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 358 ----------------------------------DSMIKLGCKPNVVTCNTLLGALCEAG 383
SMI+ GC PN T N L+ A C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
D A V++EM + + L+ T + +GL + + LL+EM K F S F+
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES--FN 520
Query: 444 N 444
N
Sbjct: 521 N 521
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F L +++ A M + GF + C+ +SSL Q V A L + +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA--LRFYRE 228
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
MR+ P ++ + + + +L M++ G + V Y +++G +G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+L + M GL P+V T+N I+G C+ K+ EA ++ M + PN VT NT
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ + GD A ++M G++ ++ TY ++ GL +A+ +A+ ++E+ K+
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P SSTF +I C + + EL K ++ P + + L+
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 199 ISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKL 258
+S+L RVD A++ M + ++++S C + + + + DM +L
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD--KGIELLQDMERL 267
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
GF + + +I ++ AL + N M + G++P+VV + ++ G +
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
++F EM + + P+ TYN ING +Q + A + + M+ G + +++T N L+
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
LC+ KA +KE+ + + N T+ ++ G + L + M++ +P
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 487
TF+ ++ C+ + A ++++++V +S +R + L H G D
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 142/285 (49%), Gaps = 4/285 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ LC+ R+ A++++ M+ G D + +++ LC++ +V A LV M
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV--EKMED 169
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G+ + + ++R L +L + ++ Q G+ P+ Y+ +L E +
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+L DE++V G P++ +YNV + G CK+ + D+A+ + + G K NVV+ N LL
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK--KCF 435
LC G +A ++ EM ++ TY I+++ L +A +L+EM K F
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
+++++ +I +C++G ++ ++ + +++ + P + A+
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
G P V T ++ L K R A+ ++ M GI PD YT +++ + G+
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
+L ++M G + TYN + GLC +++++Q V+ +++ G PN T + LL A
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
+ +A ++ E+ +KG E NL +Y ++L G + +A L E+ K F
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+++ ++ C+C G EA L+ ++ AP + L+
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
D+ L + G KP+V T +L + K + + M+ G+IPD Y +
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
N LCK+ V A+Q+V+ M G N VT N L+ LC G L+++ ++ + KG+
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
N TY +L+ + EA LL+E++ K P +++ ++ C++G ++A+ L
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 462 MKKIVAKSFAPGARAWEALL 481
+++ AK F ++ LL
Sbjct: 269 FRELPAKGFKANVVSYNILL 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 135/290 (46%), Gaps = 4/290 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+ LC + ++ +++ + +++ G + S ++ + ++ + EA+ +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG--TDEAVKLLD 235
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ G P ++ + ++ KE R DA+ + ++ G K +VV Y I+L + +G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC- 372
+ + + L EM P V TYN+ IN L + ++A+Q++ M K + V
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 373 -NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N ++ LC+ G + + EM + + N TY + +++ EA +++ +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
K + ++I +C+KG A +L+ ++ F P A + AL+
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K H + R+ +++ +I+ LC+ +VD VK L+ MI + + I SLCE N
Sbjct: 344 KGNH-QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLCEHN 401
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDF-TDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
++ K C DF +I L ++ A +L +M + G PD
Sbjct: 402 SKVQEAFYIIQSLSNKQKCC--THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAH 459
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
Y+ ++ G+ EG + E+ M P V +N I GLCK + D A+++ +
Sbjct: 460 TYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEM 519
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
M++ PN T L+ + +L AK V+ E+ L+ V
Sbjct: 520 MVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%)
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
PD+ + + + + + ++ ++S++ G KPNV LL LC+A L KA V
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
++ M G+ + Y +++ L + +G A L+E+M + + T++ ++ +C
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 452 KGLINEALELMKKIVAKSFAPGARAWEALL 481
G +N++L+ +++++ K AP A + LL
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDG--FGLDGKICSLIISSLCEQNDVTSAEALVV 251
T+ +LI++L R + A+++L M + F + + +I+ LC++ V + +V
Sbjct: 318 TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV---DLVVK 374
Query: 252 WGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQM--KQDGIKPDVVCYTIVLSG 308
D C P + + + +A YI+ + KQ D Y V++
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSVITS 432
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKP 367
+ +G+ +L EM G PD +TY+ I GLC + A++++ M + CKP
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
V N ++ LC+ A V + M K N TY I+++G+ + E+ A +L
Sbjct: 493 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Query: 428 EEM 430
+E+
Sbjct: 553 DEL 555
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 6/271 (2%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ--NDVTSAEA 248
+E TF LI L ++ RVD A K+ M++ D + S++ +SL + N +
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDS----DCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
++ DM P + + + K + ++K PD Y+I++ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
++ G + ELF M G + D YN+ I+G CK KV++A Q+++ M G +P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VVT +++ L + L +A + +E K +ELN+ Y ++DG I EA L+LE
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
E+++K P T+++++ + + INEAL
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 8/256 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +LI L + + ++ M E G LD + +++I C+ V A L+
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE-- 611
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M+ GF P V+ + +I L K +R +A + + K I+ +VV Y+ ++ G G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF---G 668
Query: 314 DYVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
++DE + +E++ GL P++YT+N ++ L K +++EA+ SM +L C PN V
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T L+ LC+ +KA +EM +G++ + +Y M+ GL I EA L +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 431 LKKCFYPRSSTFDNII 446
P S+ ++ +I
Sbjct: 789 KANGGVPDSACYNAMI 804
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
L ++ M++LG+ P V FT +IR KE R AL +L++MK + D+V Y + +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G + F E+ GL PD TY I LCK N++DEA+++ + + K P
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
NT++ AG +A +++ KG ++ Y +L L ++ EA + E
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
EM KK P ST++ +I +C+ G ++ A EL + P R
Sbjct: 368 EM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 176/439 (40%), Gaps = 36/439 (8%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
++ + + P +AY LI +H + + ++ + +E +F LIR +
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL-GYEPTVHLFTTLIRGF 213
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
R+ A+ L + + M + + + ++ +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD-MAWKFFHEIEANGLKPD 272
Query: 192 ESTFRVLISALCRIRRVDYAVKIL---------------NCMIEDGFGLDGKICSLIISS 236
E T+ +I LC+ R+D AV++ N MI G+G GK
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM-GYGSAGKF------- 324
Query: 237 LCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
EA + R G P V+ + ++ L K + +AL + +MK+D
Sbjct: 325 ---------DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-A 374
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
P++ Y I++ + G EL D M GL P+V T N+ ++ LCK K+DEA +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ M C P+ +T +L+ L + G + A V ++M N Y ++
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
+ + ++M+ + P + + CM + G + + ++I A+ F P AR+
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 477 WEALLLHSGSDLTYSETTF 495
+ ++L+H ++ T+
Sbjct: 555 Y-SILIHGLIKAGFANETY 572
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 339
A +L +MK G +P VV Y V+ G+ A+ D +LDE LF+E + +V Y+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGL-AKID--RLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I+G K ++DEA I++ +++ G PN+ T N+LL AL +A ++++A + M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
N TY I+++GL + +A + +EM K+ P + ++ +I + + G I EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 460 ELMKKIVAKSFAPGARAWEALL 481
L + A P + + A++
Sbjct: 783 ALFDRFKANGGVPDSACYNAMI 804
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
+++ +I + + LI ++ R+D A IL +++ G + + ++ +L +
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
++ EALV + M++L P + + +I L K + A +M++ G+KP +
Sbjct: 707 EIN--EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
YT ++SG+ G+ + LFD G +PD YN I GL N+ +A + +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAK---GVMKEMG 396
+ G + TC LL L + L +A V++E G
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ G+M GF P V +M+ VK + + ++ M++ +P YT ++
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
A + LF +M LG P V+ + I G K+ +VD A+ ++D M ++V
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
N + + + G + A E+ G++ + TY M+ L + EA + E +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
K P + ++ +I G +EA L+++ AK P A+ +L
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
+ +R++ V I + +I DGFG G+I EA ++ ++ + G P
Sbjct: 649 KSKRIELNVVIYSSLI-DGFGKVGRI----------------DEAYLILEELMQKGLTPN 691
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 323
+ + ++ LVK E +AL MK+ P+ V Y I+++G+ + K +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
EM G+ P +Y I+GL K + EA + D G P+ N ++ L
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
A + +E +G+ ++ T ++LD L
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 17/270 (6%)
Query: 232 LIISSLCEQNDVTSAEALVVWGDMR-KLGFCPGVMDFTDMIRFLVKEERGMDAL-YILNQ 289
+I L DV A W + R +L CP + + + ++ R DAL IL +
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCP---ESYNSLLLVMARCRNFDALDQILGE 123
Query: 290 MKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFD---EMLVLGLIPDVYTYNVYINGLC 345
M G P V C +VL + A KL E +D M P Y I
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKAN----KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
N D + + M +LG +P V TL+ + G + A ++ EM ++ ++
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 406 TYRIMLD--GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 463
Y + +D G VGK ++ A E+ P T+ ++I +C+ ++EA+E+ +
Sbjct: 240 LYNVCIDSFGKVGKVDM--AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 464 KIVAKSFAPGARAWEALLLHSGSDLTYSET 493
+ P A+ +++ GS + E
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ C+ ++ ++ M +G + S ++ + C++ +A+ +
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG--MMQQAIKFYV 391
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DMR++G P +T +I K DA + N+M Q G++ +VV YT ++ G+
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +ELF +M G+IP++ +YN I+G K +D A+++++ + G KP+++
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T + LC + AK VM EM G++ N Y ++D E LL+EM +
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
TF +I +C+ L+++A++ +I + F A A
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI-SNDFGLQANA 613
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q K + ++ + + L+ ++ + D + MI G +++I +
Sbjct: 213 QCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCM 272
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C++ DV +A L + +M+ G P + + MI K R D + +MK +P
Sbjct: 273 CKEGDVEAARGL--FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
DV+ Y +++ G E + EM GL P+V +Y+ ++ CK+ + +AI+
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M ++G PN T +L+ A C+ G+LS A + EM GVE N+ TY ++DGL
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ EA L +M P ++++ +I + ++ ALEL+ ++ + P
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA+ + M++ P ++ K + D M G +P V Y I++
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ EGD LF+EM GL+PD TYN I+G K ++D+ + + M + C+
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P+V+T N L+ C+ G L +EM G++ N+ +Y ++D + + +A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+M + P T+ ++I C+ G +++A L +++ + AL+
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++I +C+ V+ A + M G D + +I + + + + +
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD--DTVCFFE 321
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M+ + P V+ + +I K + L +MK +G+KP+VV Y+ ++ EG
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + + +M +GL+P+ YTY I+ CK + +A ++ + M+++G + NVVT
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ LC+A + +A+ + +M GV NL +Y ++ G V + A LL E+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P + I +C I A +M ++
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 135/275 (49%), Gaps = 13/275 (4%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+++ LI + + +D A+++LN + G D + I LC + +A+ VV
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK--VVM 530
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+M++ G + +T ++ K + L++L++MK+ I+ VV + +++ G+
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 313 GDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
K + F+ + GL + + I+GLCK N+V+ A + + M++ G P+
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
+L+ + G++ +A + +M G++L+L Y ++ GL ++ +A LEEM+
Sbjct: 651 YTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Query: 432 KKCFYPRSSTFDNIICCMCQK-----GLINEALEL 461
+ +P D ++C K G I+EA+EL
Sbjct: 711 GEGIHP-----DEVLCISVLKKHYELGCIDEAVEL 740
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 40/213 (18%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGL--DGKICSLIIS 235
+L + + + I + TF VLI LC+ + V AV N I + FGL + I + +I
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN-RISNDFGLQANAAIFTAMID 621
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
LC+ N V +A L QM Q G+
Sbjct: 622 GLCKDNQVEAATTL-------------------------------------FEQMVQKGL 644
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
PD YT ++ G +G+ ++ L D+M +G+ D+ Y + GL N++ +A
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
++ MI G P+ V C ++L E G + +A
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 4/222 (1%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
PG F + L+ +A+ ++MK+ + P +L G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
F +M+ G P V+TYN+ I+ +CK+ V+ A + + M G P+ VT N+++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLKKCFYPRS 439
G L +EM E ++ TY +++ GK IG EM P
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE--FYREMKGNGLKPNV 367
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ ++ C++G++ +A++ + P + +L+
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 275 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 334
+KE+ + + M ++G K V Y IV + Y + + EM++ DV
Sbjct: 118 LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDV 177
Query: 335 Y-----TYNVYING----------LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
+ T NV + G L ++EAIQ M + P +CN LL
Sbjct: 178 FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF 237
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
+ G K K+M G + TY IM+D + + ++ A L EEM + P +
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
T++++I + G +++ + +++ P + AL+
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL++ CR+R + A +I N MI+ G D ++++ L + ++A+ ++
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL--RSMKKSDAIKLFH 357
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---G 414
Query: 314 DYVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
KLD EL EM G PD TYN I + Q + +I + MI+ +P++
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 474
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N ++ + A + + V EM KG+ + ++Y +++ GL+ + + EA LEEM
Sbjct: 475 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Query: 431 LKK 433
L K
Sbjct: 535 LDK 537
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
L+K KI +E T L+ +L R + + ++L +++ F + +++++ C
Sbjct: 254 LMKKYKFKIGVE--TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
++ EA +W DM G P ++ M+ L++ + DA+ + + MK G P+V
Sbjct: 311 VRNLI--EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
YTI++ + E FD+M+ GL PD Y I G Q K+D +++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGK 417
M + G P+ T N L+ + + +M +E ++HT+ +++ +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
E+G A + +EM+KK P +++ +I + +G EA +++++ K
Sbjct: 489 YEMGRA--VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 18/288 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF + + A + AV I M + F + + + ++ SL A+ L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF--- 287
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
D K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ L ++KEM KG + TY ++ + + + + +M++
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF+ I + VA+++ G W+ ++
Sbjct: 468 EIEPSIHTFNMI---------------MKSYFVARNYEMGRAVWDEMI 500
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ ++I C+ ++ A++ + M++ G D + + +I+ Q + + L+
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL--K 427
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M++ G P + +I+ + ++ I N+M Q+ I+P + + +++
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+Y ++DEM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 374 TLLGALCEAG 383
G
Sbjct: 548 KFAADFHRGG 557
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 3/235 (1%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
W R+ GF + M+ L K + + +L +M G+ + +TI + A
Sbjct: 184 WAAERQ-GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAA 241
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ K +F+ M V T N ++ L + K+ + Q++ +K PN++T
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMT 300
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
LL C +L +A + +M G++ ++ + +ML+GL+ + +A L M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
K P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 361 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 135/275 (49%), Gaps = 3/275 (1%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
+ T+ +I A + +D A+++ + M+ DG ++ + +I+ C+ ND+ SA LV+
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA--LVL 361
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ M K G P + F+ +I + K AL +M+ G+ P V ++ G +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ + +LFDE GL +V+ N ++ LCKQ K DEA +++ M G PNVV+
Sbjct: 422 GQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N ++ C ++ A+ V + KG++ N +TY I++DG + A ++ M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
+ II +C+ G ++A EL+ ++
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L++ LC+ R+D A+++ + M G LD +I C+++++ SA AL +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL--FS 678
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ + G P + +I + AL + +M +DG++ D+ YT ++ G++ +G
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + EL+ EM +GL+PD Y V +NGL K+ + + +++ + M K PNV+ N
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
++ G+L +A + EM KG+ + T+ I++ G VG + A+ L
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 143/307 (46%), Gaps = 16/307 (5%)
Query: 184 QHM---KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC------SLII 234
HM I + ++ +I+ LC++ + A ++L MIE+ ++C + II
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK-----RLCVSCMSYNSII 591
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
++ ++ SA A + +M G P V+ +T ++ L K R AL + ++MK G
Sbjct: 592 DGFFKEGEMDSAVA--AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+K D+ Y ++ G + LF E+L GL P YN I+G + A+
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M+K G + ++ T TL+ L + G+L A + EM G+ + Y ++++GL
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
K + + + EEM K P ++ +I ++G ++EA L +++ K P
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829
Query: 475 RAWEALL 481
++ L+
Sbjct: 830 ATFDILV 836
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 149/343 (43%), Gaps = 37/343 (10%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII 234
+V +++ ++ + F L++A + R+ D+AV I+N M+E + +
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
S+L ++N +T A+ L + M +G + ++R ++EE+ +AL +L++ + G
Sbjct: 206 SALVQRNSLTEAKEL--YSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG 263
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEA 353
+PD + Y++ + D + L EM L +P TY I KQ +D+A
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
I++ D M+ G NVV +L+ C+ DL A + +M +G N T+ ++++
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 414 LVGKAEIGEASLLL----------------------------EEMLKKCFYPRSSTFDNI 445
E+ +A EE LK + N+
Sbjct: 384 FRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 446 ICC------MCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
C +C++G +EA EL+ K+ ++ P ++ ++L
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 3/258 (1%)
Query: 227 GKICSLIISSLCEQNDVTSAEALV--VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDAL 284
G+ L+I + N A LV + + GF F ++ K+ + A+
Sbjct: 124 GRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAV 183
Query: 285 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 344
I+NQM + + P LS +V + EL+ M+ +G+ D T + +
Sbjct: 184 DIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRAS 243
Query: 345 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL-N 403
++ K EA++++ I+ G +P+ + + + A C+ DL+ A +++EM K + + +
Sbjct: 244 LREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPS 303
Query: 404 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 463
TY ++ V + + +A L +EML ++I C+ + AL L
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFD 363
Query: 464 KIVAKSFAPGARAWEALL 481
K+ + +P + + L+
Sbjct: 364 KMEKEGPSPNSVTFSVLI 381
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL++ CR+R + A +I N MI+ G D ++++ L + ++A+ ++
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL--RSMKKSDAIKLFH 356
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 357 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---G 413
Query: 314 DYVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
KLD EL EM G PD TYN I + Q + +I + MI+ +P++
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 473
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N ++ + A + + V EM KG+ + ++Y +++ GL+ + + EA LEEM
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 431 LKK 433
L K
Sbjct: 534 LDK 536
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
L+K KI +E T L+ +L R + + ++L +++ F + +++++ C
Sbjct: 253 LMKKYKFKIGVE--TINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 309
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
++ EA +W DM G P ++ M+ L++ + DA+ + + MK G P+V
Sbjct: 310 VRNLI--EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
YTI++ + E FD+M+ GL PD Y I G Q K+D +++
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGK 417
M + G P+ T N L+ + + +M +E ++HT+ +++ +
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
E+G A + +EM+KK P +++ +I + +G EA +++++ K
Sbjct: 488 YEMGRA--VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 18/288 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF + + A + AV I M + F + + + ++ SL A+ L
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF--- 286
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
D K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 287 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ L ++KEM KG + TY ++ + + + + +M++
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF+ I + VA+++ G W+ ++
Sbjct: 467 EIEPSIHTFNMI---------------MKSYFVARNYEMGRAVWDEMI 499
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ ++I C+ ++ A++ + M++ G D + + +I+ Q + + L+
Sbjct: 369 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL--K 426
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M++ G P + +I+ + ++ I N+M Q+ I+P + + +++
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+Y ++DEM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Query: 374 TLLGALCEAG 383
G
Sbjct: 547 KFAADFHRGG 556
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 3/235 (1%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
W R+ GF + M+ L K + + +L +M G+ + +TI + A
Sbjct: 183 WAAERQ-GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAA 240
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ K +F+ M V T N ++ L + K+ + Q++ +K PN++T
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMT 299
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
LL C +L +A + +M G++ ++ + +ML+GL+ + +A L M
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
K P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 360 SKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 3/359 (0%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
++ LIR Y IQD++++F + + P+V V L +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS-VWSFLKE 223
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
KI + +TF +LI+ LC + + ++ M + G+ + ++ C++
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
+A L+ M+ G V + +I L + R +L M++ I P+ V Y
Sbjct: 284 FKAAIELL--DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++G EG + +L +EML GL P+ T+N I+G + EA+++ M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
G P+ V+ LL LC+ + A+G M GV + TY M+DGL + E
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A +LL EM K P T+ +I C+ G A E++ +I +P + L+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI A+K+ M G +++ LC+ + A +
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF--YM 432
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G C G + +T MI L K +A+ +LN+M +DGI PD+V Y+ +++G G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ E+ + +GL P+ Y+ I C+ + EAI+I ++MI G + T N
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ +LC+AG +++A+ M+ M G+ N ++ +++G E +A + +EM K
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+P T+ +++ +C+ G + EA + +K + A A + LL
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V D +IR ++E D+L I M G P V +L +V G+ V +
Sbjct: 163 PSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
EML + PDV T+N+ IN LC + +++ ++ M K G P +VT NT+L C+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G A ++ M KGV+ ++ TY +++ L I + LLL +M K+ +P T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ +I +G + A +L+ ++++ +P + AL+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 154/344 (44%), Gaps = 48/344 (13%)
Query: 182 KSQHMKIRIEES-------TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICS--L 232
KS ++ ++E+S T+ ++ C+ R A+++L+ M G +D +C+ +
Sbjct: 251 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG--VDADVCTYNM 308
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
+I LC N + A+ ++ DMRK P + + +I E + + A +LN+M
Sbjct: 309 LIHDLCRSNRI--AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV------------- 339
G+ P+ V + ++ G ++EG++ + ++F M GL P +Y V
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 340 ----------------------YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
I+GLCK +DEA+ +++ M K G P++VT + L+
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
C+ G AK ++ + G+ N Y ++ + EA + E M+ +
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
TF+ ++ +C+ G + EA E M+ + + P +++ L+
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 11/283 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I LC+ +D AV +LN M +DG D S +I+ C+ +A+ +V
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC-- 502
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ ++G P + ++ +I + +A+ I M +G D + ++++ + G
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +E M G++P+ +++ ING + +A + D M K+G P T
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+LL LC+ G L +A+ +K + ++ Y +L + + +A L EM+++
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
P S T+ ++I +C+KG K ++A FA A A
Sbjct: 683 SILPDSYTYTSLISGLCRKG---------KTVIAILFAKEAEA 716
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 37/338 (10%)
Query: 180 LLKSQH-MKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
LKS H + ++ + L++A+C+ + AV + M++ D + +IS LC
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ A + R P + +T + + K + +Y QM G PD
Sbjct: 700 RKGKTVIAILFAKEAEARG-NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+V ++ G G K ++L EM P++ TYN+ ++G K+ V + +
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
S+I G P+ +TC++L+ +CE+ L ++K +GVE++ +T+ +++
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 419 EIG-----------------------------------EASLLLEEMLKKCFYPRSSTFD 443
EI E+ ++L EM K+ P S +
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I +C+ G I A + ++++A P A A++
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 3/290 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VL+++LC+ +V A + + CM DG + +I+ N +A V+
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY--GNSGEGLKAFSVFD 607
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M K+G P + +++ L K +A L + D V Y +L+ + G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTC 372
+ K LF EM+ ++PD YTY I+GLC++ K AI G PN V
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+ + +AG ++M G ++ T M+DG +I + + LL EM
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
+ P +T++ ++ ++ ++ + L + I+ P +L+L
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T L+ +C ++ +KIL I G +D +++IS C ++ A LV
Sbjct: 831 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV- 889
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M LG M+ L + R ++ +L++M + GI P+ Y +++G+ G
Sbjct: 890 -MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + +EM+ + P + + L K K DEA ++ M+K+ P + +
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C+ G++ +A + M G++L+L +Y +++ GL K ++ A L EEM
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 434 CFYPRSSTFDNII-CCMCQKGLINEALELMKKIVAKSF 470
F ++T+ +I + ++ + A ++K ++A+ F
Sbjct: 1069 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ ++ TF +LIS C +++A ++ M G LD C ++S L + E
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ--E 917
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ +V +M K G P + +I L + A + +M I P V + ++
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ G + L ML + L+P + ++ ++ CK V EA+++ M G K
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLL 426
++V+ N L+ LC GD++ A + +EM G N TY+ ++ GL+ + A ++
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Query: 427 LEEMLKKCF 435
L+++L + F
Sbjct: 1098 LKDLLARGF 1106
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 4/302 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LI CR+ + A++I MI +G D +++++SLC+ V AE +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC-- 573
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G P + F +I G+ A + ++M + G P Y +L G+ G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ ++ + + D YN + +CK + +A+ + M++ P+ T +
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ LC G A KE +G L N Y +DG+ + E+M
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 493
P T + +I + G I + +L+ ++ ++ P + +LLH S T
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVST 812
Query: 494 TF 495
+F
Sbjct: 813 SF 814
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 293 DGIKPD-VVCYTIVLSGIVAEGDYVKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+GI PD + C+++VL + E + +++ ++ + G+ D YT+N+ I+ C ++
Sbjct: 823 NGILPDKLTCHSLVLG--ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 880
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+ A +V M LG + TC+ ++ L +++ V+ EM +G+ Y +
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
++GL +I A ++ EEM+ P + ++ + + G +EA L++ ++
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Query: 471 APGARAWEALL 481
P ++ L+
Sbjct: 1001 VPTIASFTTLM 1011
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 7/246 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I++ T ++ ALC+ R++D A +LN + GF +D +I + V +
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKV--EK 504
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
AL +W +M+K+ P V F +I L + A+ +++ + G+ PD + ++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G EG K E ++E + PD YT N+ +NGLCK+ ++A+ +++I+ +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREV 623
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+ VT NT++ A C+ L +A ++ EM KG+E + TY + L+ ++ E
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET---- 679
Query: 428 EEMLKK 433
+E+LKK
Sbjct: 680 DELLKK 685
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 161/361 (44%), Gaps = 5/361 (1%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFR-IPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
F L+ Y L +++DA+ + R + F+ P + ++LL
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL-KELLLD 265
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
+ + T+ L+ C++ + A +I+ M + D +++I+ LC N
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC--NA 323
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
+ E L + M+ L P V+ + +I + ++A ++ QM+ DG+K + V +
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVL-GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
I L + E + E++ + G PD+ TY+ I K + A++++ M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ G K N +T NT+L ALC+ L +A ++ +G ++ TY ++ G + ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+A + +EM K P STF+++I +C G A+E ++ P + +++
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 482 L 482
L
Sbjct: 564 L 564
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRR---VDYAVKILNCMIEDGFGLDGKICSLII 234
QI K +K++ T L+ L R + A ++ + M++ G L+ + ++++
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
+ C + + A ++ + + P + + +++ + K+ R D +L MK++G
Sbjct: 212 NGYCLEGKLEDALGMLERM-VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG 270
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+ P+ V Y ++ G G + ++ + M ++PD+ TYN+ INGLC + E +
Sbjct: 271 LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGL 330
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+++D+M L +P+VVT NTL+ E G +A+ +M++M GV+ N T+ I L L
Sbjct: 331 ELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390
Query: 415 VGKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
+ + + ++E++ F P T+ +I + G ++ ALE+M+++ K
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC-EQND 242
+ +K++ + T+ LI + A K++ M DG + ++ + LC E+
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
+ DM GF P ++ + +I+ +K AL ++ +M Q GIK + +
Sbjct: 397 EAVTRKVKELVDMH--GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+L + E + L + G I D TY I G ++ KV++A+++ D M K
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
+ P V T N+L+G LC G A E+ G+ + T+ ++ G + + +
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
A E +K F P + T + ++ +C++G+ +AL ++ +
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE---AGDLSKA 388
P +++ ++ + K A+QI MI+L KPN++TCNTLL L + +S A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSSTFDNIIC 447
+ V +M GV LN+ T+ ++++G + ++ +A +LE M+ + P + T++ I+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M +KG +++ EL+ + P + L+
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 36/339 (10%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q L + + + ++ F VLISA ++ + AV+ M E D ++I+ +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
+ +V A V+ +M K P + F ++ L K+ R DA + + M GI P
Sbjct: 173 MRE-EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ V YTI++SG+ G +LF EM G PD +N ++G CK ++ EA +++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 358 D-----------------------------------SMIKLGCKPNVVTCNTLLGALCEA 382
+M+K KP+++ L+ L +A
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
G + A ++ M KG+ + + Y ++ L G+ + E L EM + +P + T
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+IC MC+ GL+ EA E+ +I +P + AL+
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F ++I L D + L + G +D ++IS+ + + +A+ +G
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMG--MAEKAVESFGR 152
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERG-MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ P V + ++R +++EE M A + N+M + P++ + I++ G+ +G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++FD+M G+ P+ TY + I+GLC++ D+A ++ M G P+ V N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
LL C+ G + +A +++ G L L Y ++DGL +A L MLKK
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + +I + + G I +AL+L+ + +K +P + A++
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LIS LC+ D A K+ M G D + ++ C+ + A L+
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL- 293
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
K GF G+ ++ +I L + R A + M + IKPD++ YTI++ G+ G
Sbjct: 294 -FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+L M G+ PD Y YN I LC + ++E + M + P+ T
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
L+ ++C G + +A+ + E+ G ++ T+ ++DGL E+ EA LLL +M
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 82/348 (23%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
L+ C++ R+ A ++L +DGF L + S +I L T +A ++ +M
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT--QAFELYANML 330
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS-----GIVA 311
K P ++ +T +I+ L K + DAL +L+ M GI PD CY V+ G++
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 312 EGDYVKLD------------------------------ELFDEMLVLGLIPDVYTYNVYI 341
EG ++L+ E+F E+ G P V T+N I
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 342 NGLCKQNKVDEAIQIV-----------------------DSMIK---------------- 362
+GLCK ++ EA ++ D+M++
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEI 420
G P++V+ N L+ C AGD+ A ++ + LKG+ + TY +++GL VG+ E
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE- 569
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
EA L K F + + +++ C+K + A L K + K
Sbjct: 570 -EAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKK 614
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +LI L + +++ A+K+L+ M G D + +I +LC + + +L + +
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL--E 398
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M + P T +I + + +A I ++++ G P V + ++ G+ G+
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 315 -------------------YVKL----DELFDEMLVLGLI----------------PDVY 335
+++L + FD M+ G I PD+
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
+YNV ING C+ +D A+++++ + G P+ VT NTL+ L G +A
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 153/403 (37%), Gaps = 53/403 (13%)
Query: 123 IFVYLIRFYGL--ADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
I +Y I GL A +I+DA+ L +P +P +L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG--------LL 389
Query: 181 LKSQHMKIRIEES-------TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLI 233
+ + +++ + E+ T +LI ++CR V A +I + + G + +
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 234 ISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMK 291
I LC+ ++ A L+ ++ + + + F E G + A L
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
G PD+V Y ++++G GD +L + + + GL PD TYN INGL + + +
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 352 EAIQ-------------IVDSMIKLGCKPNVV--------------------TCNTLLGA 378
EA + + S++ C+ V T N +
Sbjct: 570 EAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQC 629
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
E G+ +A + E+ + EL L Y I L GL EA ++ + +K
Sbjct: 630 FKE-GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT 688
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +I +C++ ++ A+E+ + +F R LL
Sbjct: 689 PPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLL 731
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+ I+E + V + A + RR+D ++I M++ G + ++++ LC + +V ++
Sbjct: 185 LSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSK 244
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
L+ ++ G P + +I VK+ +L MK+DG+ + V YT+++
Sbjct: 245 KLIKEFSVK--GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLME 302
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
V G ++LFDEM G+ DV+ Y I+ C++ + A + D + + G P
Sbjct: 303 LSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSP 362
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+ T L+ +C+ G++ A+ +M EM KGV + + ++DG K + EAS++
Sbjct: 363 SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
+ M +K F T + I C + +EA
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 37/329 (11%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
++I + +++ LCR V+ + K++ G + + II++ +Q D + E
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
V M+K G + +T ++ VK + DA + ++M++ GI+ DV YT ++S
Sbjct: 280 G--VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTY------------------------------ 337
+G+ + LFDE+ GL P YTY
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 338 -----NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
N I+G C++ VDEA I D M + G + +V TCNT+ +AK +
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
M GV+L+ +Y ++D + + EA L EM K P + T++ +I C++
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 453 GLINEALELMKKIVAKSFAPGARAWEALL 481
G I EA +L + A P + + +L+
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI +C++ + A ++N M G + + + +I C + V EA +++
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD--EASMIYD 423
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + GF V + + +R +A L +M + G+K V YT ++ EG
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + LF EM G+ P+ TYNV I CKQ K+ EA ++ +M G P+ T
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C A ++ +A + EMGLKG++ N TY +M+ GL + EA L +EM +K
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 434 CFYPRSSTFDNIICCM 449
+ + + +I M
Sbjct: 604 GYTIDNKVYTALIGSM 619
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLV--KEERGMD-ALYILNQMKQDGIKPDVVCYT 303
E L V+ M K G +D I FLV K+ R +D L I +M G+K V T
Sbjct: 172 EGLRVFDYMVKKGLS---IDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
IV+ G+ G+ K +L E V G+ P+ YTYN IN KQ ++ M K
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G N VT L+ + G +S A+ + EM +G+E ++H Y ++ K + A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
LL +E+ +K P S T+ +I +C+ G + A LM ++ +K
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 177 PQILLKSQHMK-IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
+IL+ K + I + F LI CR VD A I + M + GF D C+ I S
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
A+ + M + G + +T++I KE +A + +M G+
Sbjct: 443 CFNRLKRYDEAKQWLFR--MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+P+ + Y +++ +G + +L M G+ PD YTY I+G C + VDEA++
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M G N VT ++ L +AG +A G+ EM KG ++ Y ++ +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 273 FLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD---ELFDEMLV 327
F V + GM + L + + M + G+ D + L VA ++D E+F M+
Sbjct: 161 FRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFL---VAAKKRRRIDLCLEIFRRMVD 217
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
G+ VY+ + + GLC++ +V+++ +++ G KP T NT++ A + D S
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
+GV+K M GV N TY ++++ V ++ +A L +EM ++ + ++I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C+KG + A L ++ K +P + + AL+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 4/292 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LIS CR + A + + + E G +I +C+ ++ +AE L+ +
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM--NE 389
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M+ G + F +I ++ +A I + M+Q G + DV + S
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
Y + + M+ G+ +Y I+ CK+ V+EA ++ M G +PN +T N
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
++ A C+ G + +A+ + M G++ + +TY ++ G + EA L EM K
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHS 484
S T+ +I + + G +EA L ++ K + + + AL+ +HS
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 134/254 (52%), Gaps = 14/254 (5%)
Query: 224 GLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMI----RFLVKEER 279
G+ K+ ++ ++SLC+ ++ AE L++ D +LG P V+ + +I RF+
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLI--DGIRLGVLPDVITYNTLIKGYTRFI----- 62
Query: 280 GMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 338
G+D Y + +M++ GI+PDV Y ++SG ++ +LFDEML GL PD+++YN
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 339 VYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
++ K + EA +I+ I L G P + T N LL ALC++G A + K +
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
+ V+ L TY I+++GL +G ++ E+ K + P + T+ ++ + I +
Sbjct: 183 R-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 458 ALELMKKIVAKSFA 471
L+L K+ + +
Sbjct: 242 GLQLFLKMKKEGYT 255
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 184 QHMKIRI--EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
+H+K R+ E T+ +LI+ LC+ RRV ++ + + G+ + + ++ +
Sbjct: 178 KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTK 237
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP-DVV 300
+ + L ++ M+K G+ ++ L+K R +A ++++ + G + D+V
Sbjct: 238 RI--EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIV 295
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +L+ +G+ +D+L +E+ + GL PD YT+ + +NGL A + + +
Sbjct: 296 SYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
++G +P+VVTCN L+ LC+AG + +A + M ++
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +L+ ALC+ D A+++ ++ + +++I+ LC+ V S + ++
Sbjct: 156 TYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMR-- 212
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+++K G+ P + +T M++ K +R L + +MK++G D V+S ++ G
Sbjct: 213 ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Query: 314 DYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ E E++ G D+ +YN +N K +D +++ + G KP+ T
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
++ L G+ A+ + +G G++ ++ T ++DGL + A L M
Sbjct: 333 TIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV 392
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + T+ +++ +C+ G + A +L+ K + A A+L
Sbjct: 393 RDEF----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 135/288 (46%), Gaps = 5/288 (1%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDG-KICSLII 234
V Q+ + H + + ++ L+S ++ R A KIL+ I + G ++++
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
+LC+ +A L R P +M + +I L K R +++ ++K+ G
Sbjct: 162 DALCKSGHTDNAIELFKHLKSR---VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
P+ V YT +L K +LF +M G D + ++ L K + +EA
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 355 QIVDSMIKLGCKP-NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+ + +++ G + ++V+ NTLL + G+L +++E+ +KG++ + +T+ I+++G
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
L+ G A L + + P T + +I +C+ G ++ A+ L
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 5/281 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI R +D A + M E G D + +IS + ++ L ++
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAK--NLMLNRVLQLFD 107
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAE 312
+M G P + + ++ K R +A IL++ + G+ P + Y I+L +
Sbjct: 108 EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKS 167
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G ELF L + P++ TYN+ INGLCK +V ++ + K G PN VT
Sbjct: 168 GHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
T+L + + K + +M +G + ++ L+ EA + E+++
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 433 KCFYPRS-STFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ +++ ++ + G ++ +L+++I K P
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 326 LVLGLI--PDVYT--YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+V GL+ P + T N+ +N LCK ++ A ++ I+LG P+V+T NTL+
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
+ +A V + M G+E ++ TY ++ G + L +EML P +
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWS 120
Query: 442 FDNIICCMCQKGLINEALELMKK-IVAKSFAPGARAWEALL 481
++ ++ C + G EA +++ + I PG + LL
Sbjct: 121 YNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGF--GLDGKICSLIISSLCEQNDVTSAEA 248
+ STF +S L + + +I + + G G +G + +++ +L + +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL--VLVQALLNAQRFSEGDR 411
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
+ M G V + +I L K R +A L +M+ GI P++V + LSG
Sbjct: 412 YL--KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
GD K+ + +++LV G PDV T+++ IN LC+ ++ +A M++ G +PN
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+T N L+ + C GD ++ + +M G+ +L+ Y + ++ +A LL+
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
ML+ P + T+ +I + + G +EA E+ I P +
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 8/220 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +I LC+ RR++ A L M + G + + +S + DV V G
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK-----VHG 481
Query: 254 DMRKL---GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ KL GF P V+ F+ +I L + + DA +M + GI+P+ + Y I++
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+ GD + +LF +M GL PD+Y YN I CK KV +A +++ +M+++G KP+
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
T +TL+ AL E+G S+A+ + + G + +T R++
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 140/309 (45%), Gaps = 5/309 (1%)
Query: 176 VPQILLKSQHMKIRI---EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL 232
V + L + + M++R E+T R + + R A ++L +E L
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
++ C N+ + E + + G+ P F + L+K ++ I +
Sbjct: 326 VL--YCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVS 383
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
G+KP Y +++ ++ + + D +M V GL+ VY+YN I+ LCK +++
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
A + M G PN+VT NT L GD+ K GV++++ + G + ++ T+ ++++
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 413 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
L EI +A +EML+ P T++ +I C G + +++L K+ +P
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSP 563
Query: 473 GARAWEALL 481
A+ A +
Sbjct: 564 DLYAYNATI 572
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 2/232 (0%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGI 309
V+ + LG P + +I LVK +D Y+ QM+ DG KPD Y I++ G+
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSN-SLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+G + L +M G P+V+TY + I+G +VDEA++ ++ M PN
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
T T + + KA V+ K L Y +L L + E L +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ ++ + P SSTF+ + C+ + + E + V++ PG + L+
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 2/262 (0%)
Query: 220 EDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEER 279
E G+ D + +S L + +D+ E ++ G PG + +++ L+ +R
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLV--ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 280 GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 339
+ L QM DG+ V Y V+ + EM G+ P++ T+N
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
+++G + V + +++ ++ G KP+V+T + ++ LC A ++ A KEM G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+E N TY I++ + + L +M + P ++ I C+ + +A
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 460 ELMKKIVAKSFAPGARAWEALL 481
EL+K ++ P + L+
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLI 607
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 22/257 (8%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL-----IISSLCEQNDVTSAEAL 249
+ VL+ AL +R + L M G+DG + S+ +I LC+ + +A
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQM-----GVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 250 VVWGDMRKLGFCPGVMDFTDM-----IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTI 304
+ +M+ G P ++ F +R VK+ G +L ++ G KPDV+ +++
Sbjct: 448 LT--EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHG-----VLEKLLVHGFKPDVITFSL 500
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
+++ + + + F EML G+ P+ TYN+ I C D ++++ M + G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
P++ N + + C+ + KA+ ++K M G++ + TY ++ L EA
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Query: 425 LLLEEMLKKCFYPRSST 441
+ + + P S T
Sbjct: 621 EMFSSIERHGCVPDSYT 637
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%), Gaps = 36/324 (11%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
E +TF +L+ LC+ R++ ++IL M E+ D + +I +L + ++ ++ L
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS--LR 319
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
VW +MR+ P VM + ++ L K+ R + +MK I D Y +++ G V
Sbjct: 320 VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFV 379
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
A+G L+++++ G I D+ YN I GLC N+VD+A ++ I+ +P+
Sbjct: 380 ADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL---------------------------- 402
T + ++ A LS V++ +G G +
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYIL 499
Query: 403 ------NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
++ Y I+++ L +I ++ L EM K F P SS++ ICC +KG +
Sbjct: 500 KTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVK 559
Query: 457 EALELMKKIVAKSFAPGARAWEAL 480
A +KI+ S P A+ +L
Sbjct: 560 AACSFHEKIIEMSCVPSIAAYLSL 583
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 107/222 (48%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
V+ M+K GF P V + ++ LVK AL + K+DG+ + + I++ G+
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G ++ E+ M PDV+ Y I L + +D ++++ D M + KP+V+
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
TL+ LC+ G + + + EM K + ++ YR++++G V ++ A L E++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ + ++ +I +C +++A +L + + + P
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 22/317 (6%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I LC + +VD A K+ IE+ D + S I+ + N ++ V
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSN--VLER 463
Query: 255 MRKLGFCPGVMDF-TDMIRFLVKEER----GMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ +LG+ V D+ T + L +E +D YIL + K G V Y I++ +
Sbjct: 464 IGELGY--PVSDYLTQFFKLLCADEEKNAMALDVFYIL-KTKGHG---SVSVYNILMEAL 517
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
GD K LF EM LG PD +Y++ I ++ V A + +I++ C P++
Sbjct: 518 YKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSI 577
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL-VGKAEIGEASL-LL 427
+L LC+ G++ +++E L VE ++ L V K E + ++
Sbjct: 578 AAYLSLTKGLCQIGEIDAVMLLVREC-LGNVESGPMEFKYALTVCHVCKGSNAEKVMKVV 636
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR--AWEALLLHS- 484
+EM ++ + + II M + G I A E+ ++ + A +E +L+
Sbjct: 637 DEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQT 696
Query: 485 ---GSDLTYSETTFAGL 498
+DL S F GL
Sbjct: 697 KKKTADLVLSGIKFFGL 713
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 75/192 (39%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
KQ G K D Y + G + D+L + M G P + + I +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+ + M K G KP V N ++ AL + G A V ++ G+ T+ I+
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ GL I E +L+ M + P + +I + +G ++ +L + ++
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 471 APGARAWEALLL 482
P A+ L++
Sbjct: 330 KPDVMAYGTLVV 341
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 157/395 (39%), Gaps = 39/395 (9%)
Query: 87 AYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFR 146
+Y+ L++ L ++ + L FE +F + R Y A+ +A F R
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 147 IPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIR 206
+ F P V + K++ I T+ +L+ RIR
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNH-AQEFFGKAKGFGIVPSAKTYSILVRGWARIR 222
Query: 207 RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD 266
A K+ + M+E +D + ++ +LC+ DV +
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM----------------- 265
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+M G+KPD + I + GD ++ D M
Sbjct: 266 --------------------FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
L+P+VYT+N I LCK KVD+A ++D MI+ G P+ T N+++ C+ +++
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+A ++ M + HTY ++L L+ A+ + E M ++ FYP +T+ +I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 447 CCMC-QKGLINEALELMKKIVAKSFAPGARAWEAL 480
+ +KG + EA + ++ + P + E L
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 16/303 (5%)
Query: 181 LKSQHMKIRIEEST--FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
L+S H+ + I S+ F +L L R +Y F + K+ ++ +
Sbjct: 102 LESYHILVEILGSSKQFALLWDFLIEAREYNY------------FEISSKVFWIVFRAYS 149
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
N +EA + M + G P V D ++ L ++ A + K GI P
Sbjct: 150 RAN--LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPS 207
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
Y+I++ G D ++FDEML + D+ YN ++ LCK VD ++
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M LG KP+ + + A C+AGD+ A V+ M + N++T+ ++ L
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
++ +A LLL+EM++K P + T+++I+ C +N A +L+ ++ P +
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN 387
Query: 479 ALL 481
+L
Sbjct: 388 MVL 390
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 131/294 (44%), Gaps = 6/294 (2%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL--IISSLCEQNDVTSAE 247
I F ++ A R A + N M+E FG+ + L ++ SLC++ V A+
Sbjct: 136 ISSKVFWIVFRAYSRANLPSEACRAFNRMVE--FGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+G + G P ++ ++R + A + ++M + D++ Y +L
Sbjct: 194 EF--FGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ GD ++F EM LGL PD Y++ ++I+ C V A +++D M + P
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP 311
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
NV T N ++ LC+ + A ++ EM KG + TY ++ E+ A+ LL
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M + P T++ ++ + + G + A E+ + + + F P + ++
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 99/202 (49%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+A N+M + GIKP V +L + + E F + G++P TY++ +
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
G + A ++ D M++ C +++ N LL ALC++GD+ + +EMG G++
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
+ +++ I + ++ A +L+ M + P TF++II +C+ +++A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 462 MKKIVAKSFAPGARAWEALLLH 483
+ +++ K P + +++ +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAY 357
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 135/289 (46%), Gaps = 2/289 (0%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+T+ +LI+ LC+ + + AV L+ + G + + +I + C+ + A L++
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL- 404
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M + G P ++ + +I LV DA+ + ++ G+ PD Y +++SG+
Sbjct: 405 -QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G ++ LF EML ++PD Y Y I+G + DEA ++ ++ G K +VV
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N ++ C +G L +A M M + + + TY ++DG V + ++ A + M K
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ ++I C +G A E K++ + P + L+
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 149/357 (41%), Gaps = 52/357 (14%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII 234
+ ++LL+ + + T+ +LI L +D AV + +I+ G D I ++++
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
S LC+ A+ L + +M P + +I ++ +A + + + G
Sbjct: 458 SGLCKTGRFLPAKLL--FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+K DVV + ++ G G + + M L+PD +TY+ I+G KQ + AI
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+I M K CKPNVVT +L+ C GD A+ KEM L+ + N+ TY ++ L
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 415 VGKAEIGEASLLLEE--MLKKC-------------------------------------- 434
++ E ++ E M KC
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS 695
Query: 435 -FYPR---------SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
F+ R ++ +++ + C+C G++ A K+V K F+P ++ A+L
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 41/321 (12%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV--VWGDM 255
L+S L + RR+ A K+ + M + G +D +++ +C + V L+ WG
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK- 234
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
G P ++ + +I K +A + ++K G P + + +++G EGD+
Sbjct: 235 ---GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF 291
Query: 316 VKLDELFDEMLVLGL-----------------------------------IPDVYTYNVY 340
V D L E+ GL PDV TYN+
Sbjct: 292 VASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNIL 351
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
IN LCK+ K + A+ +D K G PN ++ L+ A C++ + A ++ +M +G
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
+ ++ TY I++ GLV + +A + +++ + P ++ ++ ++ +C+ G A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 461 LMKKIVAKSFAPGARAWEALL 481
L +++ ++ P A + L+
Sbjct: 472 LFSEMLDRNILPDAYVYATLI 492
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 6/281 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I C++ ++ A + + GF + +I+ C++ D +++ L+ +
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL--SE 300
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+++ G V ++I + +D + + + KPDV Y I+++ + EG
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
DE GLIP+ +Y I CK + D A +++ M + GCKP++VT
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ L +G + A + ++ +GV + Y +++ GL A LL EML +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
P + + +I + G +EA +K+ + S G +
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEA----RKVFSLSVEKGVK 517
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%)
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
PDV+ +LS +V +++DEM G D Y+ + + G+C + KV+ ++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
++ GC PN+V NT++G C+ GD+ A V KE+ LKG L T+ M++G
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
+ + + LL E+ ++ +NII + G + E + I+A P
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 477 WEALL 481
+ L+
Sbjct: 348 YNILI 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I + + + A+KI M ++ + + +I+ C Q D AE +
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE--TFK 614
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+M+ P V+ +T +IR L KE ++ A+Y M + P+ V + +L G V +
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 313 --------------GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
G E F M G YN + LC V A D
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV-MKEMGLKGVELNLHTYRIMLDGLVGK 417
M+K G P+ V+ +L C G+ + + + +G KG+E+ + Y +L+ + +
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR-YSQVLEQHLPQ 793
Query: 418 AEIGEASLLLEEMLKK 433
I EAS +L M++K
Sbjct: 794 PVICEASTILHAMVEK 809
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 3/278 (1%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMI-EDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
E + +I+ LC++ + A ++L +I E + + + II + D SA +
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA--VE 611
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ +M + G P V+ FT +I K R AL + ++MK +K D+ Y ++ G
Sbjct: 612 TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+ D LF E+ LGL+P+V YN I+G K+D AI + M+ G ++
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T T++ L + G+++ A + E+ G+ + + ++++GL K + +AS +LEEM
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
KK P + +I ++G +NEA L +++ K
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 121/227 (53%), Gaps = 8/227 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ C+ R+D A+++ + M LD +I C++ND+ +A L +
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL--FS 684
Query: 254 DMRKLGFCPGVMDFTDMI---RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ +LG P V + +I R L K + +D + +M DGI D+ YT ++ G++
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAID---LYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+G+ +L+ E+L LG++PD + V +NGL K+ + +A ++++ M K PNV+
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
+T++ G+L++A + EM KG+ + + +++ G V K
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 143/294 (48%), Gaps = 11/294 (3%)
Query: 180 LLKSQHMKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI--CSLIIS 235
LL+ K+ + S T+ +I A + ++ AV++++ M+ GFG+ + + +++
Sbjct: 296 LLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV--GFGIPMSVIAATSLVN 353
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
C+ N++ +AL ++ M + G P + F+ M+ + K A+ +MK I
Sbjct: 354 GYCKGNEL--GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 296 KPD-VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
P V+ +T++ + AE L E+F++ I + N CKQ KVD A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAAL-EIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M + G +PNVV N ++ A C ++ A+ + EM KG+E N TY I++DG
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
+ A ++ +M F ++ II +C+ G ++A E+++ ++ +
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 1/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +LI + + A ++N M F + I + II+ LC+ + A+ ++
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML-QN 579
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+++ + + +I VK A+ +M ++G P+VV +T +++G
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
E+ EM + L D+ Y I+G CK+N + A + + +LG PNV N
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ G + A + K+M G+ +L TY M+DGL+ I AS L E+L
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++ + +KG +A ++++++ K P + ++
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 143/343 (41%), Gaps = 37/343 (10%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII 234
MV ++ S+ + F L++A R +R+DYAV M++ + ++
Sbjct: 152 MVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVL 211
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
SSL N + EA ++ M +G + ++R ++E + +A+ I ++ G
Sbjct: 212 SSLVRSNLID--EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEA 353
+PD + +++ + D V +L EM LG+ TY I K+ ++EA
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
++++D M+ G +V+ +L+ C+ +L KA + M +G+ + + +M++
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 414 LVGKAE---------------IGEASLLLEEMLKKCFYPRS---------STFDN----- 444
E I +S+L+ M++ C S +F++
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG 449
Query: 445 -----IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
I C++G ++ A +K + K P + ++L
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 126/285 (44%), Gaps = 4/285 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L++ C+ + A+ + N M E+G D + S+++ C+ ++ +A+ + M+
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEM--EKAIEFYMRMKS 408
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
+ P + MI+ +K E AL I N + I +C I L +G
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL-FCKQGKVDA 467
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
M G+ P+V YN + C+ +D A I M++ G +PN T + L+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
+ D A V+ +M E N Y +++GL + +A +L+ ++K+ Y
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 438 RS-STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
S +++++II + G + A+E +++ +P + +L+
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 178/419 (42%), Gaps = 21/419 (5%)
Query: 80 SCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETP-----------------EF 122
S + + + +I L H + +LD L + E +P
Sbjct: 75 SSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSH 134
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
+F +L+ +Y A I D++ +F +I P + V +I K
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDT-VWKIFKK 193
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
+ + + VL+ A + + A K+L+ M E G D + +IS C+++
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS- 252
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
EAL V M + G P ++ + I +E R +A + ++K D + + V Y
Sbjct: 253 -MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTY 310
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
T ++ G D + L + M G P V TYN + LC+ ++ EA +++ M
Sbjct: 311 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
+P+ +TCNTL+ A C+ D+ A V K+M G++L++++Y+ ++ G E+
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A L M++K F P +T+ ++ + +E +L+++ + + L+
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ I R R+ A ++ I+D + + +I C ND+ EAL +
Sbjct: 275 TYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDID--EALRLRE 331
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M GF PGV+ + ++R L ++ R +A +L +M I+PD + +++
Sbjct: 332 VMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D V ++ +M+ GL D+Y+Y I+G CK +++ A + + SMI+ G P T +
Sbjct: 392 DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYS 451
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ + +++E +G+ ++ YR ++ + ++ A +L E M KK
Sbjct: 452 WLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKK 511
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALEL 461
S F + + G + EA L
Sbjct: 512 GLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++ LC R+ A ++L M D C+ +I++ C+ D+ SA + V
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA--VKVKK 401
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G + + +I K +A L M + G P Y+ ++ G +
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ +L +E GL DV Y I +CK +VD A + +SM K G + V
Sbjct: 462 KQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFT 521
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
T+ A G +++A + M + + +NL Y+ + G ++
Sbjct: 522 TMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
+L+ + + V A+++ M + D + ++II LC ++ +A + DM
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC--DMV 327
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
K G P V + +I L KE + +A + M+ G+ PD + Y +++ G+ GD
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ +E ML L+P+V +NV I+G + A+ +++ M+ G KPNV T N L+
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
+ G L A V EM + + TY ++L + A L +EML++
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVA 467
P T+ ++ +C KG + +A L+ +I A
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 37/316 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV--TSAEALVV 251
++ LI LC + VD A+ + N M + G + C++I+ +LC++ + + + L
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
D + ++ T ++ K + AL + +M Q + D V Y +++ G+ +
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G+ V +M+ G+ PDV+TYN I+ LCK+ K DEA + +M G P+ ++
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 372 CNTLLGALCEAGDLSKAK-----------------------------------GVMKEMG 396
++ LC GD+++A V+ M
Sbjct: 373 YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLML 432
Query: 397 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
GV+ N++T ++ G V + +A + EM +P ++T++ ++ C G +
Sbjct: 433 SYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLR 492
Query: 457 EALELMKKIVAKSFAP 472
A +L +++ + P
Sbjct: 493 LAFQLYDEMLRRGCQP 508
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL++ +M G+ P ++ + +L+G+ G K D L EM +G P+ +YN I
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG--------------DLSKA 388
GLC N VD+A+ + ++M K G +PN VTCN ++ ALC+ G D S+A
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 389 KG-------------------------VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
V KEM K V + Y +++ GL + A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +M+K+ P T++ +I +C++G +EA +L + AP +++ ++
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LISALC+ + D A + M G D +II LC DV A ++
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL-- 394
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K P V+ + +I + AL +LN M G+KP+V ++ G V G
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + +EM + PD TYN+ + C + A Q+ D M++ GC+P+++T
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
L+ LC G L KA+ ++ + G+ ++ + I+ GEA L+ ++ L
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 13/310 (4%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC-SLIISSLCEQNDVTSAEALVV 251
S ++ LC ++D A+ + MI G + G I + +++ LC+ + A+ LV
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGV-IPGLITHNHLLNGLCKAGYIEKADGLV- 179
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD-VVCYTIVLS--- 307
+MR++G P + + +I+ L ALY+ N M + GI+P+ V C IV +
Sbjct: 180 -REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Query: 308 -GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G++ + L+E+ D + D+ + ++ K V +A+++ M +
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPL-DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
+ V N ++ LC +G++ A G M +M +GV ++ TY ++ L + + EA L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
M P ++ II +C G +N A E + ++ S P W ++ G
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 487 DLTYSETTFA 496
Y +T+ A
Sbjct: 418 ---YGDTSSA 424
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 40/323 (12%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+ ++I + +IR+ ++N M + L+ + +++ V EA+ +
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVD--EAIYAFN 192
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K P ++ F ++ L K + A + M+ D PD Y+I+L G E
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEP 251
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------ 367
+ K E+F EM+ G PD+ TY++ ++ LCK +VDEA+ IV SM CKP
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 368 -----------------------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
+V N+L+GA C+A + V+KEM K
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
GV N + I+L L+ + E EA + +M+K C P + T+ +I C+K + A
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETA 430
Query: 459 LELMKKIVAKSFAPGARAWEALL 481
++ K + K P + L+
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLI 453
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
F L+SALC+ + V A ++ M D F D K S+++ ++ ++ A V+
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKARE--VFR 261
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P ++ ++ M+ L K R +AL I+ M KP Y++++ E
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 321
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + F EM G+ DV +N I CK N++ +++ M G PN +CN
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L L E G+ +A V ++M +K E + TY +++ K E+ A + + M KK
Sbjct: 382 IILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 440
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+P TF +I +C++ +A L+++++ P
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
V F ++R + ++ +A+Y N M++ + P++V + +LS + + K E+F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
+ M PD TY++ + G K+ + +A ++ MI GC P++VT + ++ LC+A
Sbjct: 227 ENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
G + +A G+++ M + Y +++ + + EA EM + + F
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
+++I C+ + ++K++ +K P +++ +L H
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
KQ + V Y +++ Y + +L + M ++ +V T+ + + + KV
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKV 184
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
DEAI + M K PN+V N LL ALC++ ++ KA+ V + M + + TY I+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSIL 243
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
L+G + + +A + EM+ +P T+ ++ +C+ G ++EAL +++ +
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 471 APGARAWEALLLHSGSD 487
P + L+ G++
Sbjct: 304 KPTTFIYSVLVHTYGTE 320
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 50/223 (22%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC-------SLIISSLCEQNDVTSA 246
T+ +++ LC+ RVD A+ I+ M D IC S+++ + +N +
Sbjct: 274 TYSIMVDILCKAGRVDEALGIVRSM-------DPSICKPTTFIYSVLVHTYGTENRL--E 324
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA+ + +M + G V F +I K R + +L +MK G+ P+ I+L
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 307 SGIVAEGDYVKLDELFDEMLVL----------------------------------GLIP 332
++ G+ + ++F +M+ + G+ P
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
++T++V INGLC++ +A +++ MI++G +P+ VT L
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 89/241 (36%), Gaps = 72/241 (29%)
Query: 122 FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILL 181
FI+ L+ YG +R+++AVD F + R
Sbjct: 308 FIYSVLVHTYGTENRLEEAVDTFLEMER-------------------------------- 335
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL---- 237
MK + + F LI A C+ R+ ++L M G + K C++I+ L
Sbjct: 336 --SGMKADV--AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 238 ------------------------------CEQNDVTSAEALVVWGDMRKLGFCPGVMDF 267
CE+ ++ +A+ VW MRK G P + F
Sbjct: 392 EKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADK--VWKYMRKKGVFPSMHTF 449
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
+ +I L +E A +L +M + GI+P V + + ++ E L L ++M V
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNV 509
Query: 328 L 328
L
Sbjct: 510 L 510
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 5/292 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
+ + TF ++ R R+V A+ + M E GF ++ + ++ +L + +V A+
Sbjct: 160 LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQK- 218
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
V+ M+K F P + +T ++ +E + + +MK +G +PDVV Y I+++
Sbjct: 219 -VFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
Y + F+EM P + + INGL + K+++A++ + G
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
T N L+GA C + + A + EM LKGV N TY I+L L+ EA + +
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT 397
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M C P ST++ ++ C K ++ A+++ ++ K PG + +L+
Sbjct: 398 M--SC-EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 135/347 (38%), Gaps = 70/347 (20%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
S + LI +L +I++ +++ M L + +LI V EA+ +
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK--EAIGAF 185
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M + GF DF M+ L K DA + ++MK+ +PD+ YTI+L G E
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN---- 368
+ +++DE+ EM G PDV Y + IN CK K +EAI+ + M + CKP+
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 369 -------------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
T N L+GA C + + A + EM L
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 398 KGVELN-------LH-------------------------TYRIMLDGLVGKAEIGEASL 425
KGV N LH TY IM+ K + A
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIK 425
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ +EM K P F ++I +C + ++EA E +++ P
Sbjct: 426 IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 164/417 (39%), Gaps = 78/417 (18%)
Query: 84 TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDL 143
T + Y LI++L + I ++D + + +K + E F + R Y A ++++A+
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKE-TFALISRRYARARKVKEAIGA 184
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
F ++ F ++E S F ++ L
Sbjct: 185 FHKMEEF------------------------------------GFKMESSDFNRMLDTLS 208
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
+ R V A K+ + M + F D K ++++ ++ ++ + V +M+ GF P
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDE--VNREMKDEGFEPD 266
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF- 322
V+ + +I K ++ +A+ N+M+Q KP + +++G+ +E E F
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 323 ----------------------------------DEMLVLGLIPDVYTYNVYINGLCKQN 348
DEM + G+ P+ TY++ ++ L +
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+ EA ++ +M C+P V T ++ C L A + EM KGV +H +
Sbjct: 387 RSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
++ L + ++ EA EML P F + + +G ++ +L+ K+
Sbjct: 444 SLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 9/293 (3%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
+ D K +P +Y L++ +L + V + + E FE + +I +
Sbjct: 219 VFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM-KDEGFEPDVVAYGIIINAH 277
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
A + ++A+ F + + C P+ + + +S+ +E
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL-EFFERSKSSGFPLE 336
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
T+ L+ A C +R++ A K ++ M G G + + +I+ L S EA V
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ--RSKEAYEV 394
Query: 252 WGDMRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ M C P V + M+R +ER A+ I ++MK G+ P + ++ +++ +
Sbjct: 395 YQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALC 450
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
E + E F+EML +G+ P + ++ L + + D+ +V M +L
Sbjct: 451 HENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 97/217 (44%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
F + R + + +A+ ++M++ G K + + +L + + ++FD+M
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
PD+ +Y + + G ++ + ++ M G +P+VV ++ A C+A
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+A EM + + + H + +++GL + ++ +A E F + T++ ++
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
C + +A + + ++ K P AR ++ +L H
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
IS+LC+ R + A IL+ ++++ L+ + ++S L D++ LV+ M +
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVL--KMDE 322
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSGIVA 311
+ P V+ +I L K R +AL + QM+ DG IK D + + ++ G+
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 312 EGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + +EL M L +P+ TYN I+G C+ K++ A ++V M + KPNVV
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T NT++G +C L+ A +M +GV+ N+ TY ++ + + +A E+M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI A C + V+ A+ M+E G D KI +IS LC+ +A+ V
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR--RDHDAIRVVE 535
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+++ GF ++ + +I + +L M+++G KPD + Y ++S
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTC 372
D+ ++ + ++M GL P V TY I+ C ++DEA+++ M + PN V
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEML 431
N L+ A + G+ +A + +EM +K V N+ TY + L K + GE L L++EM+
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ-GETLLKLMDEMV 714
Query: 432 K 432
+
Sbjct: 715 E 715
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 166/385 (43%), Gaps = 14/385 (3%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD------RIQDAVDLF 144
LI TL + + + V + + R ++ + I I F L D R+++A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 145 FRIP-RFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
R+ RC P +++ + + +I+ T ++ +C
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD-MRKLGFCP 262
R ++ AV M ++G + +I + C V++ E + W + M + G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC---SVSNVEKAMYWYEKMLEAGCSP 509
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ +I L + R DA+ ++ ++K+ G D++ Y +++ + + K+ E+
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
+M G PD TYN I+ K + ++++ M + G P V T ++ A C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 383 GDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G+L +A + K+MGL V N Y I+++ G+A L EEM K P T
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 442 FDNIICCMCQKGLINEALELMKKIV 466
++ + C+ +K L+LM ++V
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDEMV 714
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 148/352 (42%), Gaps = 45/352 (12%)
Query: 175 MVPQILLKSQHMKIRIEESTFR-VLISALCRIRRVDYAVKILNCMI--EDGFGLDGKICS 231
MV Q +L + + ++ S R V++ L R VD A K+L+ M+ E F +
Sbjct: 167 MVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITAD 226
Query: 232 LIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK 291
+++ + ++ +T + + + G P + T I L K R A IL+ +
Sbjct: 227 IVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLM 286
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
++ + + +LS + D ++++L +M + + PDV T + IN LCK +VD
Sbjct: 287 KNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 352 EAIQI-------------------------VDSMIKLG-----------------CKPNV 369
EA+++ +D + K+G C PN
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
VT N L+ C AG L AK V+ M ++ N+ T ++ G+ + A + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M K+ T+ +I C + +A+ +K++ +P A+ + AL+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
++LK +KIR + T +LI+ LC+ RRVD A+++ M GK
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-------RGK--------RT 360
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-QDGIKP 297
+ +V A+++ F +I L K R +A +L +MK ++ P
Sbjct: 361 DDGNVIKADSI----------------HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP 404
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ V Y ++ G G E+ M + P+V T N + G+C+ + ++ A+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M K G K NVVT TL+ A C ++ KA ++M G + Y ++ GL
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
+A ++E++ + F ++ +I C K + E++ + + P + +
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 478 EALL 481
L+
Sbjct: 585 NTLI 588
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 78/129 (60%)
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
K + + AL LN MK+ GI P V+ YT ++ G V G+ K E+F EM V G +P+V+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
TYN I GLC + EA ++ M GC PN V +TL+G L +AG LS+A+ V+KEM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 396 GLKGVELNL 404
KG ++L
Sbjct: 821 VKKGHYVHL 829
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%)
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
K NK A+ ++ M ++G P+V+ TL+ +G+L KAK + +EM +KG N+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
TY M+ GL E EA LL+EM + P + ++ + + G ++EA +++K++
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 466 VAK 468
V K
Sbjct: 821 VKK 823
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+ M +G+ P V Y I+G ++D+A ++ M G PNV T N+++ LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
AG+ +A ++KEM +G N Y ++ L ++ EA +++EM+KK Y
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ I+ CR + VD A K+ M ++G + + +I L E + A +L+V
Sbjct: 192 TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV-- 249
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ CP V +T +I L + +A+ + QM + GIKPD YT+++ +
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ L + ML GL+P+V TYN I G CK+N V +A+ ++ M++ P+++T N
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYN 368
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
TL+ C +G+L A ++ M G+ N T
Sbjct: 369 TLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
S +K ++ + L+S+L R V+ ++ M+ED D + +++ C+
Sbjct: 111 SFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGY 170
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
V A+ V W + Q G PD Y
Sbjct: 171 VVEAKQYVTW-------------------------------------LIQAGCDPDYFTY 193
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
T ++G + ++F EM G + +Y I GL + K+DEA+ ++ M
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
C PNV T L+ ALC +G S+A + K+M G++ + Y +++ + E
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
AS LLE ML+ P T++ +I C+K +++A+ L+ K++ ++ P + L+
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLI 371
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 90/194 (46%)
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
CY +LS + G ++ L+ EML + PD+YT+N +NG CK V EA Q V +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
I+ GC P+ T + + C ++ A V KEM G N +Y ++ GL +I
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA LL +M P T+ +I +C G +EA+ L K++ P + L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 481 LLHSGSDLTYSETT 494
+ S T E +
Sbjct: 302 IQSFCSGDTLDEAS 315
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
IS+LC+ R + A IL+ ++++ L+ + ++S L D++ LV+ M +
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVL--KMDE 322
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSGIVA 311
+ P V+ +I L K R +AL + QM+ DG IK D + + ++ G+
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 312 EGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + +EL M L +P+ TYN I+G C+ K++ A ++V M + KPNVV
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T NT++G +C L+ A +M +GV+ N+ TY ++ + + +A E+M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 15/407 (3%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD------RIQDAVDLF 144
LI TL + + + V + + R ++ + I I F L D R+++A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 145 FRIP-RFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
R+ RC P +++ + + +I+ T ++ +C
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD-MRKLGFCP 262
R ++ AV M ++G + +I + C V++ E + W + M + G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC---SVSNVEKAMYWYEKMLEAGCSP 509
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ +I L + R DA+ ++ ++K+ G D++ Y +++ + + K+ E+
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
+M G PD TYN I+ K + ++++ M + G P V T ++ A C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 383 GDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G+L +A + K+MGL V N Y I+++ G+A L EEM K P T
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH-SGSD 487
++ + C+ +K L+LM ++V +S P E L+ SGSD
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSD 736
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LIS LC++RR A++++ + E GF LD +++I C++N+ ++ D
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT--D 571
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K G P + + +I F K + ++ QM++DG+ P V Y V+ + G+
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 315 YVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF +M L + P+ YN+ IN K +A+ + + M +PNV T N
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
L L E +M EM + E N T I+++ L G E+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 148/352 (42%), Gaps = 45/352 (12%)
Query: 175 MVPQILLKSQHMKIRIEESTFR-VLISALCRIRRVDYAVKILNCMI--EDGFGLDGKICS 231
MV Q +L + + ++ S R V++ L R VD A K+L+ M+ E F +
Sbjct: 167 MVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITAD 226
Query: 232 LIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK 291
+++ + ++ +T + + + G P + T I L K R A IL+ +
Sbjct: 227 IVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLM 286
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
++ + + +LS + D ++++L +M + + PDV T + IN LCK +VD
Sbjct: 287 KNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 352 EAIQI-------------------------VDSMIKLG-----------------CKPNV 369
EA+++ +D + K+G C PN
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
VT N L+ C AG L AK V+ M ++ N+ T ++ G+ + A + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M K+ T+ +I C + +A+ +K++ +P A+ + AL+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE--ALV 250
S + +I A C+ ++ A ++ M E+G +D I I ++ + + + E LV
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEG--IDAPIA--IYHTMMDGYTMVADEKKGLV 470
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
V+ +++ GF P V+ + +I K + AL + MK++G+K ++ Y+++++G V
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
D+ +F++M+ G+ PDV YN I+ C +D AIQ V M KL +P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T ++ ++GD+ ++ V M G +HT+ +++GLV K ++ +A +L+EM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
T+ I+ G +A E ++ + +EALL
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +ISA C + +D A++ + M + + II + D+ +L V+
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR--RSLEVFDM 614
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
MR+ G P V F +I LV++ + A+ IL++M G+ + YT ++ G + GD
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
K E F + GL D++TY + CK ++ A+ + M N N
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ GD+ +A ++++M +GV+ ++HTY + ++ A+ +EEM
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ +I + L +AL +++ A P + LL
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 14/298 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF LI+ L R+++ AV+IL+ M G + + I+ D + +A +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD--TGKAFEYFT 683
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ G + + +++ K R AL + +M I + Y I++ G G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + +L +M G+ PD++TY +I+ K ++ A Q ++ M LG KPN+ T
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL------LL 427
TL+ A KA +EM G++ + Y +L L+ +A I EA + +
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTIC 863
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
+EM++ T + C+C+ I + + + + K+F P W + H G
Sbjct: 864 KEMVEAGLIVDMGTAVHWSKCLCK---IEASGGELTETLQKTFPPD---WSSHHHHHG 915
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P +F M++F + A +M+ GI P YT ++ D +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+M G+ + TY+V + G K + A D ++ N ++ A C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSS 440
++ +A+ +++EM +G++ + Y M+DG A+ + L++ + LK+C F P
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD-EKKGLVVFKRLKECGFTPTVV 485
Query: 441 TFDNIICCMCQKGLINEALELMK 463
T+ +I + G I++ALE+ +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSR 508
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 185/448 (41%), Gaps = 44/448 (9%)
Query: 74 DSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGL 133
+ F SY + + Y +I L ++ + ++ V++ ++ + E + +F +IR +
Sbjct: 37 ERFPSYGHNGS--VYATMIDILGKSNRVLEMKYVIERMKE-DSCECKDSVFASVIRTFSR 93
Query: 134 ADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES 193
A R++DA+ LF + F C ++ +
Sbjct: 94 AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRIT 153
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV--V 251
+L+ LC++ R D A ++ M G D +++ C + + A L+ +
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--- 308
+ + + G ++ + ++ L DA+ IL ++ + G+K CY + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 309 ----------------------------------IVAEGDYVKLDELFDEMLVLGLIPDV 334
+ EG V+ +E+ M G P
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 335 YTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
+ Y + LC+ K+ EA+ +++ M++ C P V N L+ LC+ G +A G +K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 394 EMGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
+M + N TY+ ++DGL + EAS ++EEML K +P T+ +I +C
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 453 GLINEALELMKKIVAKSFAPGARAWEAL 480
EA+ ++++V++ P + W+AL
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+R+L+ ALC VD A++IL ++ G + I + E + +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G P + ++ M L +E + ++ +L M+ G +P Y + + G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 314 DYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVT 371
+ + ++ ++ G +P V YNV I GLC K EA+ + M K + C N T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
TL+ LC G +A VM+EM +K + TY +M+ GL EA + LEEM+
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 432 KKCFYPRSSTFDNIICCMC 450
+ P SS + + +C
Sbjct: 468 SQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 185/448 (41%), Gaps = 44/448 (9%)
Query: 74 DSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGL 133
+ F SY + + Y +I L ++ + ++ V++ ++ + E + +F +IR +
Sbjct: 37 ERFPSYGHNGS--VYATMIDILGKSNRVLEMKYVIERMKE-DSCECKDSVFASVIRTFSR 93
Query: 134 ADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEES 193
A R++DA+ LF + F C ++ +
Sbjct: 94 AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRIT 153
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV--V 251
+L+ LC++ R D A ++ M G D +++ C + + A L+ +
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--- 308
+ + + G ++ + ++ L DA+ IL ++ + G+K CY + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 309 ----------------------------------IVAEGDYVKLDELFDEMLVLGLIPDV 334
+ EG V+ +E+ M G P
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 335 YTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
+ Y + LC+ K+ EA+ +++ M++ C P V N L+ LC+ G +A G +K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 394 EMGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
+M + N TY+ ++DGL + EAS ++EEML K +P T+ +I +C
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 453 GLINEALELMKKIVAKSFAPGARAWEAL 480
EA+ ++++V++ P + W+AL
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+R+L+ ALC VD A++IL ++ G + I + E + +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G P + ++ M L +E + ++ +L M+ G +P Y + + G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 314 DYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVT 371
+ + ++ ++ G +P V YNV I GLC K EA+ + M K + C N T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
TL+ LC G +A VM+EM +K + TY +M+ GL EA + LEEM+
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 432 KKCFYPRSSTFDNIICCMC 450
+ P SS + + +C
Sbjct: 468 SQDMVPESSVWKALAESVC 486
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 42/315 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+SALC++ +VD ++ + ++GF D S I + + +AL+
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALV--DALMQDR 266
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G V+ ++ +I L KE +AL +L +M ++G++P+++ YT ++ G+ G
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ LF+ +L +G+ D + Y I+G+C++ ++ A ++ M + G +P+++T N
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI------------- 420
T++ LC AG +S+A V K GV ++ TY +LD + I
Sbjct: 387 TVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 421 ----------------------GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
GEA L M + P ++T+ +I C+ G I EA
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 459 LELMKKIVAKSFAPG 473
LE+ ++ S +
Sbjct: 502 LEMFNELRKSSVSAA 516
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDG--FGLDGKICSLIISSLCEQNDVTSA----E 247
TF LI +D A+++L M + D +CS +IS C+ A E
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ V G + P ++ +T ++ L + + + ++ +++ +G + D V Y+ +
Sbjct: 196 SAVDSGVL-----VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G G V EM+ G+ DV +Y++ I+GL K+ V+EA+ ++ MIK G +P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
N++T ++ LC+ G L +A + + G+E++ Y ++DG+ K + A +L
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+M ++ P T++ +I +C G ++EA E+ K +V
Sbjct: 371 GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 123/254 (48%), Gaps = 13/254 (5%)
Query: 231 SLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM 290
++II+ LC++ + A L + R G + + +I L ++ ++AL + + +
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSR--GVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+ G+ P V Y I++ + EG ++ ++L D M+ GL+P++ YN ++G CK +
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQT 776
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
++A+++V + P+ T ++++ C+ GD+ +A V E K + + + +
Sbjct: 777 EDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFL 836
Query: 411 LDGLVGKAEIGEASLLLEEMLKK-----------CFYPRSSTFDNIICCMCQKGLINEAL 459
+ G K + EA LL EML S + + +C++G + +A+
Sbjct: 837 IKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAI 896
Query: 460 ELMKKIVAKSFAPG 473
+++ +I + + G
Sbjct: 897 KILDEISSTIYPSG 910
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I LC++ +++ A + N ++ G +D + +I +C + ++ A +++ G
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML--G 371
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDA------------------------------ 283
DM + G P ++ + +I L R +A
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAV 431
Query: 284 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 343
L I + + I D+V I+L + G Y + D L+ M + L PD TY I G
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 344 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 403
CK +++EA+++ + + K V N ++ ALC+ G L A V+ E+ KG+ L+
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 404 LHTYRIMLDGLVGKAEIGEASLL-----LEEMLKK-CFYPRSSTFDNIICCMCQKGLINE 457
+HT R +L + A G+ +L LE++ C ++ I +C++G
Sbjct: 551 IHTSRTLLHSI--HANGGDKGILGLVYGLEQLNSDVCL----GMLNDAILLLCKRGSFEA 604
Query: 458 ALEL 461
A+E+
Sbjct: 605 AIEV 608
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG--FGLDGKICSLIISSLCEQNDVT 244
+I I + ++ A + R + A K +N I F + SLI ++D
Sbjct: 56 QININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDD-- 113
Query: 245 SAEALVVWGD-MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK---PDVV 300
++ L++ D +R G P + F +I V++ +A+ +L M + + V
Sbjct: 114 PSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFV 173
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
C + V+SG G F+ + G L+P++ TY ++ LC+ KVDE +V
Sbjct: 174 C-SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 419
+ G + + V + + + G L A +EM KG+ ++ +Y I++DGL +
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+ EA LL +M+K+ P T+ II +C+ G + EA L +I++
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 13/285 (4%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +I ALC+ +D A ++L + E G LD ++ S+ LV +
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK---PDVVCYTIV--LSGI 309
C G+++ D I L K A+ + M++ G+ P + T+V L +
Sbjct: 579 QLNSDVCLGMLN--DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 636
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
A V E + DV Y + INGLCK+ + +A+ + G N
Sbjct: 637 DAYLLVVNAGETTLSSM------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNT 690
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
+T N+L+ LC+ G L +A + + G+ + TY I++D L + +A LL+
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
M+ K P +++I+ C+ G +A+ ++ + + P A
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDA 795
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/357 (18%), Positives = 144/357 (40%), Gaps = 72/357 (20%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+ + +++ +D ++I +E +D +C++++ + A+AL +
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL--YR 471
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M ++ P + MI+ K + +AL + N++++ + VCY ++ + +G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 314 DYVKLDELFDEMLVLGLIPDVYT-----YNVYING------------------------- 343
E+ E+ GL D++T ++++ NG
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 344 -----LCKQNKVDEAIQI---------------------VDSMIKLGC------------ 365
LCK+ + AI++ VD++ L
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 366 -KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
+V+ ++ LC+ G L KA + +GV LN TY +++GL + + EA
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L + + P T+ +I +C++GL +A +L+ +V+K P + +++
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 49/208 (23%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ LC+ C++ EAL ++
Sbjct: 692 TYNSLINGLCQ----------QGCLV---------------------------EALRLFD 714
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ +G P + + +I L KE +DA +L+ M G+ P+++ Y ++ G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG----- 769
Query: 314 DYVKLDELFDEMLVLG------LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
Y KL + D M V+ + PD +T + I G CK+ ++EA+ +
Sbjct: 770 -YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEM 395
+ L+ C G + +A+G+++EM
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 37/333 (11%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
LLK + I + + ++I+ L + +VD AV +L+ ++++G + + II +C+
Sbjct: 427 LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 240 QNDVTSAEALVVWGDMRKLGFCP-------------------GVMDFTDMIRF------- 273
+ S E+L + G+M+ G P G +D +RF
Sbjct: 487 EG--RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWI 544
Query: 274 ---------LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
L + R +DA L+ + +G +V T + G++ + ELF +
Sbjct: 545 KHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
+ G PDV Y+V I LCK + EA + + M+ G KP V T N+++ C+ G+
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ + + M ++ TY ++ GL EA EM K YP TF
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
+I +C+ G EAL +++ K P + +
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 4/285 (1%)
Query: 190 IEESTFRVLISALCRIRRVDY--AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+E S F + C R D+ A+ +L M GF K + ++ LCE + +
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENG--RAVD 562
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A D+ GF ++ T I L+K E L + + +G PDV+ Y +++
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ ++ D LF+EM+ GL P V TYN I+G CK+ ++D + + M + P
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+V+T +L+ LC +G S+A EM K N T+ ++ GL GEA +
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
EM +K P S+ + +++ IN + +++V K P
Sbjct: 743 REMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
I+ +TF L+ LC R A K L+ + +GF + I L + V L
Sbjct: 544 IKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD--RGL 599
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
++ D+ G CP V+ + +I+ L K R M+A + N+M G+KP V Y ++ G
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
EG+ + M PDV TY I+GLC + EAI + M C PN
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
+T L+ LC+ G +A +EM K +E + Y ++ + I + E
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFRE 779
Query: 430 MLKKCFYPRS 439
M+ K +P S
Sbjct: 780 MVHKGRFPVS 789
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 137/319 (42%), Gaps = 16/319 (5%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q+ K + M + + + + VLI LC+ + ++ A+ + + G D I ++ S
Sbjct: 304 QLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSF 363
Query: 238 CEQNDVTSAEALVVWGDMRKL-----------GFCPG--VMDFTDMIRFLVK--EERGMD 282
E+++++ +++ GD+ K GF V + I+ L+ E G+
Sbjct: 364 SEESELSRITEVII-GDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVS 422
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
+ L + I PD +IV++ +V L +++ GLIP YN I
Sbjct: 423 EIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIE 482
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
G+CK+ + +E+++++ M G +P+ T N + G L E D A ++K+M G E
Sbjct: 483 GMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ ++ L +A L+++ + F I + + ++ LEL
Sbjct: 543 WIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF 602
Query: 463 KKIVAKSFAPGARAWEALL 481
+ I A P A+ L+
Sbjct: 603 RDICANGHCPDVIAYHVLI 621
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/379 (18%), Positives = 147/379 (38%), Gaps = 62/379 (16%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFR-CTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
F + IR G A + +A +F R+ C P + + LK
Sbjct: 144 FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLK 203
Query: 183 S-QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
+ ++ T ++ C + + A+ + N ++ G+ LD I ++++ S C+
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCK-- 260
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
WG + K A ++ +++ I+ +
Sbjct: 261 ----------WGQVDK-------------------------AFELIEMLEERDIRLNYKT 285
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y +++ G V E K +LF++M +G+ D+ Y+V I GLCK ++ A+ + +
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK 345
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSK-AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ G P+ LL + E +LS+ + ++ ++ K V L Y+ + +G + +
Sbjct: 346 RSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVML---LYKSLFEGFIRNDLV 402
Query: 421 GEASLLLEEML------------------KKCFYPRSSTFDNIICCMCQKGLINEALELM 462
EA ++ ++ K P S + +I C+ + ++ A+ L+
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL 462
Query: 463 KKIVAKSFAPGARAWEALL 481
IV PG + ++
Sbjct: 463 HDIVQNGLIPGPMMYNNII 481
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 209 DYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFT 268
+ AV I + + E G + + +L++ +LC++ V A +++ K P F
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL---QLKSHITPNAHTFN 228
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
I K R +AL+ + +MK G +P V+ YT ++ + +++K+ E+ EM
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
G P+ TY ++ L Q + +EA+++ M + GCKP+ + N L+ L AG L +A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 389 KGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNII 446
+ V + EM GV +N TY M+ E +A LL+EM P T+ ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 447 CCMCQKGLINEALELMKKIVAK 468
++G + E +L+K++V K
Sbjct: 409 RSCFKRGDVVEVGKLLKEMVTK 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF + I C+ RV+ A+ + M GF + II C+Q + ++
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML--S 283
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P + +T ++ L ++ +AL + +MK+ G KPD + Y ++ + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 314 DYVKLDELFD-EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVT 371
+ + +F EM LG+ + TYN I C ++ D+AI+++ M C P+V T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
LL + + GD+ + ++KEM K + L+ TY ++ L A L EEM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 431 LKKCFYPRSST 441
+ + PR T
Sbjct: 464 ISQDITPRHRT 474
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++S+L + + A+++ M G D + +I +L + AE V
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER-VFRV 354
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAE 312
+M +LG + MI + A+ +L +M+ + PDV Y +L
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 313 GDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD V++ +L EM+ + D TY I LC+ N + A + + MI P T
Sbjct: 415 GDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Query: 372 CNTLL 376
C LL
Sbjct: 475 CLLLL 479
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+EA+ I D + + G + N + N LL LC+ + +A+ V+ ++ + N HT+ I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ G + EA ++EM F P ++ II C CQ+ + E++ ++ A
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 471 APGA 474
P +
Sbjct: 291 PPNS 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
D ++ V+ RG D L LN + + ++ G++ + +FD +
Sbjct: 138 DRMKEFVERMRG-DKLVTLNTVAK------------IMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
GL + + N+ ++ LCK+ +V++A ++V +K PN T N + C+A + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
++EM G + +Y ++ + E + +L EM P S T+ I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 449 MCQKGLINEALELMKKIVAKSFAPGA 474
+ + EAL + ++ P +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDS 329
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 209 DYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFT 268
+ AV I + + E G + + +L++ +LC++ V A +++ K P F
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL---QLKSHITPNAHTFN 228
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
I K R +AL+ + +MK G +P V+ YT ++ + +++K+ E+ EM
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
G P+ TY ++ L Q + +EA+++ M + GCKP+ + N L+ L AG L +A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 389 KGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNII 446
+ V + EM GV +N TY M+ E +A LL+EM P T+ ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 447 CCMCQKGLINEALELMKKIVAK 468
++G + E +L+K++V K
Sbjct: 409 RSCFKRGDVVEVGKLLKEMVTK 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF + I C+ RV+ A+ + M GF + II C+Q + ++
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML--S 283
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M G P + +T ++ L ++ +AL + +MK+ G KPD + Y ++ + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 314 DYVKLDELFD-EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVT 371
+ + +F EM LG+ + TYN I C ++ D+AI+++ M C P+V T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
LL + + GD+ + ++KEM K + L+ TY ++ L A L EEM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Query: 431 LKKCFYPRSST 441
+ + PR T
Sbjct: 464 ISQDITPRHRT 474
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++S+L + + A+++ M G D + +I +L + AE V
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER-VFRV 354
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAE 312
+M +LG + MI + A+ +L +M+ + PDV Y +L
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 313 GDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD V++ +L EM+ + D TY I LC+ N + A + + MI P T
Sbjct: 415 GDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Query: 372 CNTLL 376
C LL
Sbjct: 475 CLLLL 479
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+EA+ I D + + G + N + N LL LC+ + +A+ V+ ++ + N HT+ I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ G + EA ++EM F P ++ II C CQ+ + E++ ++ A
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 471 APGA 474
P +
Sbjct: 291 PPNS 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 269 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
D ++ V+ RG D L LN + + ++ G++ + +FD +
Sbjct: 138 DRMKEFVERMRG-DKLVTLNTVAK------------IMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
GL + + N+ ++ LCK+ +V++A ++V +K PN T N + C+A + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
++EM G + +Y ++ + E + +L EM P S T+ I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 449 MCQKGLINEALELMKKIVAKSFAPGA 474
+ + EAL + ++ P +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDS 329
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
L+ QHM + VL+ CR ++ AV++ + MIE G + IC+ +I+ C+
Sbjct: 327 LVADQHM--------YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 240 QNDVTSAEALVVWGDMRKL------------GFC---------------------PGVMD 266
+ AE + + L G+C P VM
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+ +++ + D L + M + G+ D + + +L + GD+ + +L++ +L
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
GL+ D T NV I+GLCK KV+EA +I+D++ CKP V T L + G+L
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+A V + M KG+ + Y ++ G + + + L+ E+ + P +T+ +I
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 447 CCMCQKGLINEA 458
C G+I++A
Sbjct: 619 TGWCNIGMIDKA 630
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 51/370 (13%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
++D+ + C P Y L +L++ V +++ER F T E ++ LI
Sbjct: 528 ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE-MYNTLISGA 586
Query: 132 GLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIE 191
+ DL + TPTV
Sbjct: 587 FKYRHLNKVADLVIELRARGLTPTV----------------------------------- 611
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL-- 249
+T+ LI+ C I +D A MIE G L+ ICS I +SL + + A L
Sbjct: 612 -ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 250 -VVWGDMRKLGFCPGVMDFTDMIRF----LVKEERGMDALYILNQMKQDGIKPDVVCYTI 304
+V D+ PG + + +K ++ ++ + N + + P+ + Y +
Sbjct: 671 KIVDFDL----LLPGYQSLKEFLEASATTCLKTQKIAES--VENSTPKKLLVPNNIVYNV 724
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
++G+ G +LF ++L IPD YTY + I+G +++A + D M
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G PN+VT N L+ LC+ G++ +A+ ++ ++ KG+ N TY ++DGLV + EA
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEA 844
Query: 424 SLLLEEMLKK 433
L E+M++K
Sbjct: 845 MRLKEKMIEK 854
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 130/261 (49%), Gaps = 5/261 (1%)
Query: 211 AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDM 270
A+ + + MI D CS+++++ C +V A + LG V+ + +
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETE-SSLGLELNVVTYNSL 267
Query: 271 IR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
I ++ + GM +L M + G+ +VV YT ++ G +G + + +F+ +
Sbjct: 268 INGYAMIGDVEGMTR--VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
L+ D + Y V ++G C+ ++ +A+++ D+MI++G + N CN+L+ C++G L +A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
+ + M ++ + HTY ++DG + EA L ++M +K P T++ ++
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 449 MCQKGLINEALELMKKIVAKS 469
+ G ++ L L K ++ +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRG 466
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 26/299 (8%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI+ I V+ ++L M E G + + +I C++ + AE +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 254 DMRKL------------GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
+KL G+C T IR DA+ + + M + G++ +
Sbjct: 323 KEKKLVADQHMYGVLMDGYCR-----TGQIR---------DAVRVHDNMIEIGVRTNTTI 368
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
+++G G V+ +++F M L PD +TYN ++G C+ VDEA+++ D M
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ P V+T N LL G + K M +GV + + +L+ L +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA L E +L + + T + +I +C+ +NEA E++ + P + ++AL
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKA 388
L+P+ YNV I GLCK K+++A ++ ++ P+ T L+ AGD++KA
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
+ EM LKG+ N+ TY ++ GL + A LL ++ +K P + T++ +I
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 449 MCQKGLINEALELMKKIVAKSFAPGA 474
+ + G + EA+ L +K++ K G+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 223 FGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMD 282
F + +I+ E+ V +A L V+ +M G P ++ ++ LV++
Sbjct: 151 FSFSPTVFDMILKVYAEKGLVKNA--LHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFV 208
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYI 341
AL++ +QM + PDV +IV++ G+ K E LGL +V TYN I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
NG V+ +++ M + G NVVT +L+ C+ G + +A+ V + + K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
+ H Y +++DG +I +A + + M++ ++ +++I C+ G + EA ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 462 MKKIVAKSFAPGARAWEALL 481
++ S P + L+
Sbjct: 389 FSRMNDWSLKPDHHTYNTLV 408
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +L+ RI + + M++ G D CS ++ +L + D EA+ +W
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN--EAMKLWE 495
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ G + MI L K E+ +A IL+ + KP V Y + G G
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + + + M G+ P + YN I+G K +++ +V + G P V T
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
L+ C G + KA EM KG+ LN++ + + L +I EA LLL++++
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 135/336 (40%), Gaps = 46/336 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T V+IS LC++ +V+ A +IL+ + + F + + S EA V
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P + + +I K ++ +++ G+ P V Y +++G G
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI----QIVD----------- 358
K EM+ G+ +V + N L + +K+DEA +IVD
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685
Query: 359 -----------------------SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
S K PN + N + LC+AG L A+ + ++
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 396 GLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
L + +TY I++ G +I +A L +EM K P T++ +I +C+ G
Sbjct: 746 -LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 454 LINEALELMKKIVAKSFAPGARAWEAL---LLHSGS 486
++ A L+ K+ K P A + L L+ SG+
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 181 LKSQHMKIRIEEST-----------FRVLISALCRIRRVDYAVKILNCMIE-DGFGLDGK 228
LK+Q + +E ST + V I+ LC+ +++ A K+ + ++ D F D
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY 756
Query: 229 ICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN 288
+++I D+ +A + +M G P ++ + +I+ L K A +L+
Sbjct: 757 TYTILIHGCAIAGDIN--KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
++ Q GI P+ + Y ++ G+V G+ + L ++M+ GL + G KQ
Sbjct: 815 KLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL----------VRGSDKQG 864
Query: 349 KVDEAIQIV-DSMIKLG 364
VD ++V D +KLG
Sbjct: 865 DVDIPKEVVLDPEVKLG 881
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 136/301 (45%), Gaps = 13/301 (4%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V +I L+ + I E T+ +LI+ + +++ A + M GF + + +I
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 236 SLCEQNDVTSAEALVVWG---DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
C+Q A WG +M G P + I L R DA +L+ M
Sbjct: 317 GYCKQGLFDDA-----WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA 371
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
PDVV Y ++ G + G +V+ LFD++ + P + TYN I+GLC+ ++
Sbjct: 372 ----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
A ++ + M P+V+T TL+ + G+LS A V EM KG++ + + Y
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 413 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI-ICCMCQKGLINEALELMKKIVAKSFA 471
G + + +A L EEM+ + T N+ I +C+ G + +A+E +KI
Sbjct: 488 GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV 547
Query: 472 P 472
P
Sbjct: 548 P 548
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 10/266 (3%)
Query: 218 MIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIR--FLV 275
MI GF + C++++ L + + A A V+ M + G P V+ F M+ F
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASA--VYETMIEHGIMPTVITFNTMLDSCFKA 251
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
+ +D +++ +MK+ I+ V Y I+++G G + +M G Y
Sbjct: 252 GDLERVDKIWL--EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
++N I G CKQ D+A + D M+ G P T N + ALC+ G + A+ ++ M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
V +Y ++ G + + EASLL +++ +P T++ +I +C+ G +
Sbjct: 370 AAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 456 NEALELMKKIVAKSFAPGARAWEALL 481
A L +++ + P + L+
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLV 451
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 142/370 (38%), Gaps = 69/370 (18%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCM----------IEDGFGLDGKIC------------ 230
ST+ + I ALC R+D A ++L+ M + G+ GK
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 231 ---------SLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
+ +I LCE ++ A+ L +M P V+ +T +++ VK
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLK--EEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-------------- 327
A + ++M + GIKPD YT G + GD K L +EM+
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 328 ----------------------LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+GL+PD TY I G + + A + D M++
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
P+V+T L+ +AG L +A EM +GV N+ T+ +L G+ I EA
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
L +M ++ P ++ +I C E ++L K+++ K P AL H
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Query: 486 SDLTYSETTF 495
D E F
Sbjct: 702 KDHESREVEF 711
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 125/281 (44%), Gaps = 6/281 (2%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
+++ L R ++ A + MIE G + ++ S + D+ + +W +M+
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK--IWLEMK 265
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
+ + + +I K + +A M++ G + ++ G +G +
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ DEML G+ P TYN+YI LC ++D+A +++ SM P+VV+ NTL+
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLM 381
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
+ G +A + ++ + ++ TY ++DGL + A L EEM + +
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
P T+ ++ + G ++ A E+ +++ K P A+
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
F++M+ G +P V N+ + L +++A + ++MI+ G P V+T NT+L + +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL---------------- 425
AGDL + + EM + +E + TY I+++G ++ EA
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 426 -------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
+ +EML YP +ST++ IC +C G I++A EL+ +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 467 A 467
A
Sbjct: 371 A 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 204 RIRRVDYAVKILNCMIE-DGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCP 262
R+ D A ++ M+ D D I ++ I LC+ ++ +A+ + ++G P
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV--KAIEFQRKIFRVGLVP 548
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ +T +IR ++ + A + ++M + + P V+ Y +++ G G + +
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
EM G+ P+V T+N + G+CK +DEA + + M + G PN + L+ C+
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDF 668
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
+ + KEM K +E + +T+R + L E E L
Sbjct: 669 EKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 189 RIEESTF--RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
RIE+ F L+ A+C+ ++D A +IL M + S +I +
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD-- 426
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EAL ++G+MR LG + + ++ K R +AL IL +M GIK DVV Y +L
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G +G Y ++ ++F EM ++P++ TY+ I+G K EA++I G +
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+VV + L+ ALC+ G + A ++ EM +G+ N+ TY ++D
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A IL QM I P+VV Y+ V+ G G + + LF EM LG+ D +YN ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
K + +EA+ I+ M +G K +VVT N LLG + G + K V EM + V
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
NL TY ++DG EA + E + +I +C+ GL+ A+ L+
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 463 KKIVAKSFAPGARAWEALLLHSGSDLT 489
++ + +P + +++ G T
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSAT 599
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 147/339 (43%), Gaps = 2/339 (0%)
Query: 122 FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILL 181
+ F LI YG + ++A+ +F + + P + V +
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
+ Q ++ + TF L++ R + A + + M D + ++ ++C+
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
+ A ++ ++++ P V+ ++ +I K R +AL + +M+ GI D V
Sbjct: 389 QMDLAFEILAQMPVKRI--MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y +LS G + ++ EM +G+ DV TYN + G KQ K DE ++ M
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ PN++T +TL+ + G +A + +E G+ ++ Y ++D L +G
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
A L++EM K+ P T+++II + ++ + +
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 129/287 (44%), Gaps = 1/287 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F LISA R + A+ + N M E G + + +I + C + + + + +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDE 329
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M++ G P + F ++ + A + ++M I+ DV Y +L I G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
E+ +M V ++P+V +Y+ I+G K + DEA+ + M LG + V+ NT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
LL + G +A +++EM G++ ++ TY +L G + + E + EM ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ +I + GL EA+E+ ++ + + AL+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 227 GKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYI 286
GK+ S +IS+L VT A+ ++ G+ V F+ +I + +A+ +
Sbjct: 233 GKLASAMISTLGRYGKVTIAKR--IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEG-DYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
N MK+ G++P++V Y V+ G ++ ++ + FDEM G+ PD T+N + +C
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVC 349
Query: 346 KQNKVDEAIQ-IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
+ + EA + + D M + +V + NTLL A+C+ G + A ++ +M +K + N+
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 405 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
+Y ++DG EA L EM +++ ++ + G EAL+++++
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 465 IVAKSFAPGARAWEALLLHSGSDLTYSE 492
+ + + ALL G Y E
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDE 497
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 3/275 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q+ + +H R+ + I L R R + A I M GF L S IS L
Sbjct: 30 QVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGL 89
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
C+ +AL+ DM LGF P + F + L +E + A+ M Q G +P
Sbjct: 90 CKVKKFDLIDALL--SDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
DVV YTI+++G+ G E+++ M+ G+ PD + GLC KVD A ++V
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 358 DSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
IK K + V N L+ C+AG + KA+ + M G E +L TY ++L+
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+ A ++ EM++ + +++ ++ C+
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 135/288 (46%), Gaps = 1/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +LI+ L R +V AV+I N MI G D K C+ ++ LC V A +V
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA-E 209
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+++ + + +I K R A + + M + G +PD+V Y ++L+
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + + EM+ G+ D Y+YN + C+ + D+ + ++ +VV+ +
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ C A + KA + +EM KG+ +N+ TY ++ + + A LL++M +
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + I+ +C+ G +++A + ++ P A ++ +L+
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIED----GFGLDGKICSLIISSLCEQNDV 243
I+++ ++ L+ CR+ D K N M+++ GF D S +I + C ++
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPD---KCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNT 341
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A L + +MR+ G V+ +T +I+ ++E A +L+QM + G+ PD + YT
Sbjct: 342 RKAYRL--FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+L + G+ K +F++M+ + PD +YN I+GLC+ +V EAI++ + M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 403
C P+ +T ++G L LS A V +M KG L+
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A+ V+ +MR + D+ I LV+E R A I MK G Y+ +S
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G+ + +D L +M LG IPD++ +NVY++ LC++NKV A+Q M++ G +P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+VV+ L+ L AG ++ A + M GV + ++ GL ++ A ++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 428 EEMLKKCFYPRSS-TFDNIICCMCQKGLINEALELMKKIVAK 468
E +K S+ ++ +I C+ G I +A E +K ++K
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKA-EALKSYMSK 248
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ LI CR A ++ M + G ++ + +I + + + + A+ L+
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL--D 384
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M +LG P + +T ++ L K A + N M + I PD + Y ++SG+ G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF++M PD T+ I GL + K+ A ++ D M+ G + +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 374 TLLGALC 380
TL+ A C
Sbjct: 505 TLIKASC 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+ I LVK +A+ + ++M+ + Y + +V E + + ++ +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 327 VLG--LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
+G LIP +TY+ +I+GLCK K D ++ M LG P++ N L LC
Sbjct: 72 PMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ A M +G E ++ +Y I+++GL ++ +A + M++ P +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 445 IICCMCQKGLINEALELM 462
++ +C ++ A E++
Sbjct: 190 LVVGLCHARKVDLAYEMV 207
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 15/313 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV--V 251
T+ VL+ L + + YA+ IL ++++G G++ + +D+ + E V +
Sbjct: 415 TYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI----------DDLGNIEVKVESL 464
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
G++ + + + L + + AL + +M G P Y V+ +
Sbjct: 465 LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
E L L + + L +PDV TY + +N LCK+N D A I+D+M +LG +P V
Sbjct: 525 ENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAI 584
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
++++G+L + G + +A+ +M G++ + Y IM++ I EA+ L+EE++
Sbjct: 585 YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH--SGSDLT 489
K P S T+ +I + G++ + + + K++ +P + AL+ H D
Sbjct: 645 KHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Query: 490 YSETTFAGLFNQN 502
+S T F GL +N
Sbjct: 705 FSFTLF-GLMGEN 716
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +I L + ++ ++N + E F D ++++ LC++ND +A A++
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII--D 571
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M +LG P V ++ +I L K+ R ++A +M + GI+PD + Y I+++ G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +EL +E++ L P +TY V I+G K +++ Q +D M++ G PNVV
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
L+G + GD + + MG ++ + Y +L GL
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 189/487 (38%), Gaps = 64/487 (13%)
Query: 73 IDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYG 132
I+ + C P P +Y +IK L + ++D+ +++ ++ ++ + + +
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 133 LADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEE 192
DR A + + PTV + K I+ +E
Sbjct: 560 KNDR-DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE-AEETFAKMLESGIQPDE 617
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+ ++I+ R R+D A +++ +++ +++IS + +
Sbjct: 618 IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG--MMEKGCQYL 675
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG---- 308
M + G P V+ +T +I +K+ + + M ++ IK D + Y +LSG
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 309 ---------IVAEGDYVKLDELFD-------------------EMLVLG-----LIPDVY 335
IV G L L M V+G +IP++Y
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLY 795
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
+N I G C ++DEA ++SM K G PN+VT L+ + EAGD+ A + +
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG- 854
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
E + Y +L GL +A L+ EM K P +++ ++ C+C L
Sbjct: 855 --TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 456 NEALELMKKIVAKSFAP-------------------GARAWEALLLHSG-SDLTYSETTF 495
EA++++K + A P ARA A+++ SG S L ++
Sbjct: 913 MEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGL 972
Query: 496 AGLFNQN 502
+ NQN
Sbjct: 973 LKMLNQN 979
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 14/293 (4%)
Query: 185 HMKIR---IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
HM++ +++ + L+ C+ + A+++ M+E F LD I + +I +
Sbjct: 262 HMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLG 321
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVV 300
+ V++ M K G V + MI KE AL + +N + I +V
Sbjct: 322 MLDKGR--VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH 379
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
CYT ++ G +G K +L ML G++PD TY V + L K +++ A+ I+ S+
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI 439
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLS-KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 419
+ GC N + L G++ K + ++ E+ K L ++ L +
Sbjct: 440 LDNGCGINPPVIDDL-------GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRN 492
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
A +E+M+ P +++++I C+ Q+ +I + L+ I F P
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 4/293 (1%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ S ++ L ++RR D A L+ +I G+ SL++ LC Q+ EA
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFL--EAFH 187
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP-DVVCYTIVLSGI 309
+ +++ G + + + L +A+ +L+ + P V Y +
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCF 247
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G + + LFD M V G D Y + CK N + A+++ M++ + +
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLE 428
NTL+ + G L K + + +M KGV+ N+ TY IM+ + + A L +
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + N+I +KG +++A++L+ +++ P + LL
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q+L +Q + + +T +ISAL R A + + + G + + ++
Sbjct: 290 QLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGY 349
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
+ + AE++V +M K G P ++ +I V R A +L +M+ ++P
Sbjct: 350 VKTGPLKDAESMV--SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+ ++ +L+G G++ K ++ EM +G+ PD YNV I+ K N +D A+
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
D M+ G +P+ VT NTL+ C+ G A+ + + M +G TY IM++ +
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
+ LL +M + P T ++ + G N+A+E ++++ + P + +
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 478 EALL 481
AL+
Sbjct: 588 NALI 591
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ LI A R ++ A+ ++ M +DG+ D SL+I SL N + S L ++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
++ + V D+I K AL +L + G+ ++S + G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ + LF+E+ G+ P YN + G K + +A +V M K G P+ T +
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L+ A AG A+ V+KEM V+ N + +L G + E + +L+EM
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++ +I + ++ A+ +++++ P W L+
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 14/399 (3%)
Query: 71 TLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRF 130
L + + P AY L+K V T L+D ++ +E+ E + LI
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK-RGVSPDEHTYSLLIDA 383
Query: 131 YGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
Y A R + A + + P Q+L + + + ++
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF-QVLKEMKSIGVKP 442
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ + V+I + +D+A+ + M+ +G D + +I C+ AE +
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM- 501
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ M + G P + MI +ER D +L +MK GI P+VV +T ++
Sbjct: 502 -FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + E +EM +GL P YN IN ++ ++A+ M G KP+++
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
N+L+ A E ++A V++ M GV+ ++ TY ++ L+ + + ++ EEM
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
+ P + ++ AL MK+ + S
Sbjct: 681 IMSGCKPDRKA----------RSMLRSALRYMKQTLRAS 709
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 8/309 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I+ + L+ + + A +++ M + G D SL+I + SA
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+V +M P F+ ++ +L +MK G+KPD Y +V+
Sbjct: 395 --IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 308 GIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
G + LD FD ML G+ PD T+N I+ CK + A ++ ++M + G
Sbjct: 453 TF---GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
C P T N ++ + + K ++ +M +G+ N+ T+ ++D +A
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 484
LEEM P S+ ++ +I Q+GL +A+ + + + P A +L+
Sbjct: 570 ECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Query: 485 GSDLTYSET 493
G D +E
Sbjct: 630 GEDRRDAEA 638
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 2/294 (0%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
IR+ F LI CR+ R D A+K+ M +G+ + + + E
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLM--GIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
AL ++ M K+G P + + +I K + L + + M+++ I D+ +V+
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ + F+ ++ + PD+ TYN I G C ++DEA +I + + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
N VT L+ LC+ D+ A + M KG + N TY ++D +I + L
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
EEM +K P ++ II +C++G ++EA + + + P A+ L+
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+ LI + + K+ + + G LD + S I + D+ +A VV+
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS--VVYK 380
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M G P V+ +T +I+ L ++ R +A + Q+ + G++P +V Y+ ++ G G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ L+++M+ +G PDV Y V ++GL KQ + A++ M+ + NVV N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ C +A V + MG+ G++ ++ T+ ++ + + + EA L M K
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 434 CFYPRSSTFDNIICCMCQ 451
P + + +I C+
Sbjct: 561 GLEPDALAYCTLIDAFCK 578
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 190 IEESTFRVLISALCRIRR------VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ E FRV I + ++ + ++ A ++L+ +++ G + +I+ C++ ++
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM 302
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A L + M + G P ++ ++ +I K + +Q G+K DVV ++
Sbjct: 303 DRAFDL--FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+ V GD ++ ML G+ P+V TY + I GLC+ ++ EA + ++K
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G +P++VT ++L+ C+ G+L + ++M G ++ Y +++DGL + + A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 463
+ML + F+++I C+ +EAL++ +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC-EQNDVTSAEALVVWGDM 255
VL + C+ V A+ ++E GF + C+ ++ L +Q +V S +V
Sbjct: 223 VLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVL--- 278
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
G P V+ F +I K A + M+Q GI+PD++ Y+ ++ G G
Sbjct: 279 -DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+LF + L G+ DV ++ I+ K + A + M+ G PNVVT L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ LC+ G + +A G+ ++ +G+E ++ TY ++DG + L E+M+K +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 436 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + ++ + ++GL+ A+ K++ +S + +L+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I C +RR+D A +I + FG + +++I LC+ ND+ A + ++
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA--IRMFS 695
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + G P + + ++ + K + + +M++ GI P +V Y+I++ G+ G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ +F + + L+PDV Y + I G CK ++ EA + + M++ G KP+
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 4/301 (1%)
Query: 183 SQHMKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
Q +K +E S T+ LI C+ + + MI+ G+ D I +++ L +Q
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ A V M V+ F +I + R +AL + M GIKPDV
Sbjct: 475 GLMLHAMRFSV--KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
+T V+ + EG + LF M +GL PD Y I+ CK K +Q+ D M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ ++ CN ++ L + + A + +E ++ TY M+ G +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA + E + F P + T +I +C+ ++ A+ + + K P A + L
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 481 L 481
+
Sbjct: 713 M 713
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 143/287 (49%), Gaps = 3/287 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI-CSLIISSLCEQNDVTSAEALVVW 252
T+ +L+ C++ +D + +L M+ GF L+ I CS+++S LC+ + EAL ++
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID--EALSLF 386
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M+ G P ++ ++ +I L K + AL++ ++M I P+ + +L G+ +
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G ++ L D ++ G D+ YN+ I+G K ++EA+++ +I+ G P+V T
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N+L+ C+ ++++A+ ++ + L G+ ++ +Y ++D L EM
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
+ P + T+ I +C+ ++++ + + G R E+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 38/324 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+F ++S C++ VD A +++ G +++I+ LC + AEAL +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELAS 281
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM K G P + + + + A ++ M G+ PDV+ YTI+L G G
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 314 DY---------------------------------VKLDE---LFDEMLVLGLIPDVYTY 337
+ ++DE LF++M GL PD+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
++ I+GLCK K D A+ + D M PN T LL LC+ G L +A+ ++ +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
G L++ Y I++DG I EA L + +++ P +TF+++I C+ I E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 458 ALELMKKIVAKSFAPGARAWEALL 481
A +++ I AP ++ L+
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM 545
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
++ ++ L ++++ DA+ L + I P VV + ++SG G F +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
GL+P VY++N+ INGLC + EA+++ M K G +P+ VT N L G +S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
A V+++M KG+ ++ TY I+L G I +LL++ML + F ++II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSII 364
Query: 447 CC------MCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
C +C+ G I+EAL L ++ A +P A+ ++++H
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIH 406
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 14/300 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T L+ LC+ + A +L+ +I G LD + +++I + + EAL ++
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI--EEALELFK 492
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ + G P V F +I K + +A IL+ +K G+ P VV YT ++ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK------- 366
+ +DEL EM G+ P TY+V GLC+ K + ++ I CK
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 367 -----PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
P+ +T NT++ LC LS A ++ M + ++ + TY I++D L I
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+A + + ++ + +I C KG A++L +++ + F R + A++
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 117/276 (42%), Gaps = 18/276 (6%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ ++I + ++ A+++ +IE G + +I C+ ++ AEA +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI--AEARKILDV 528
Query: 255 MRKLGFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSG---- 308
++ G P V+ +T ++ + +D L +MK +GI P V Y+++ G
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 309 --------IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
++ E + K + +M G+ PD TYN I LC+ + A ++ M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ T N L+ +LC G + KA + + + V L+ Y ++ K +
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
A L ++L + F + +I +C++ L+N
Sbjct: 707 EMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 143/287 (49%), Gaps = 3/287 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI-CSLIISSLCEQNDVTSAEALVVW 252
T+ +L+ C++ +D + +L M+ GF L+ I CS+++S LC+ + EAL ++
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID--EALSLF 386
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
M+ G P ++ ++ +I L K + AL++ ++M I P+ + +L G+ +
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
G ++ L D ++ G D+ YN+ I+G K ++EA+++ +I+ G P+V T
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N+L+ C+ ++++A+ ++ + L G+ ++ +Y ++D L EM
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
+ P + T+ I +C+ ++++ + + G R E+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 38/324 (11%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+F ++S C++ VD A +++ G +++I+ LC + AEAL +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI--AEALELAS 281
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM K G P + + + + A ++ M G+ PDV+ YTI+L G G
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 314 DY---------------------------------VKLDE---LFDEMLVLGLIPDVYTY 337
+ ++DE LF++M GL PD+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
++ I+GLCK K D A+ + D M PN T LL LC+ G L +A+ ++ +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 457
G L++ Y I++DG I EA L + +++ P +TF+++I C+ I E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 458 ALELMKKIVAKSFAPGARAWEALL 481
A +++ I AP ++ L+
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLM 545
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
++ ++ L ++++ DA+ L + I P VV + ++SG G F +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
GL+P VY++N+ INGLC + EA+++ M K G +P+ VT N L G +S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
A V+++M KG+ ++ TY I+L G I +LL++ML + F ++II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSII 364
Query: 447 CC------MCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
C +C+ G I+EAL L ++ A +P A+ ++++H
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIH 406
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 14/300 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T L+ LC+ + A +L+ +I G LD + +++I + + EAL ++
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI--EEALELFK 492
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ + G P V F +I K + +A IL+ +K G+ P VV YT ++ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK------- 366
+ +DEL EM G+ P TY+V GLC+ K + ++ I CK
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 367 -----PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
P+ +T NT++ LC LS A ++ M + ++ + TY I++D L I
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+A + + ++ + +I C KG A++L +++ + F R + A++
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 117/276 (42%), Gaps = 18/276 (6%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ ++I + ++ A+++ +IE G + +I C+ ++ AEA +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI--AEARKILDV 528
Query: 255 MRKLGFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSG---- 308
++ G P V+ +T ++ + +D L +MK +GI P V Y+++ G
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 309 --------IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
++ E + K + +M G+ PD TYN I LC+ + A ++ M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ T N L+ +LC G + KA + + + V L+ Y ++ K +
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
A L ++L + F + +I +C++ L+N
Sbjct: 707 EMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 15/407 (3%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLAD------RIQDAVDLF 144
LI TL + + + V + + R ++ + I I F L D R+++A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEKM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 145 FRIP-RFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
R+ RC P +++ + + +I+ T ++ +C
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD-MRKLGFCP 262
R ++ AV M ++G + +I + C V++ E + W + M + G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC---SVSNVEKAMYWYEKMLEAGCSP 509
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ +I L + R DA+ ++ ++K+ G D++ Y +++ + + K+ E+
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
+M G PD TYN I+ K + ++++ M + G P V T ++ A C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 383 GDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G+L +A + K+MGL V N Y I+++ G+A L EEM K P T
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH-SGSD 487
++ + C+ +K L+LM ++V +S P E L+ SGSD
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSD 736
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
IS+LC+ R + A IL+ ++++ L+ + ++S L D++ LV+ D K
Sbjct: 265 FISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSGIVA 311
+ P V+ +I L K R +AL + +M+ DG IK D + + ++ G+
Sbjct: 325 IR--PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 312 EGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + +EL M L P+ TYN I+G C+ K++ A ++V M + KPNVV
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T NT++G +C L+ A +M +GV+ N+ TY ++ + + +A E+M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LIS LC++RR A++++ + E GF LD +++I C++N+ ++ D
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT--D 571
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M K G P + + +I F K + ++ QM++DG+ P V Y V+ + G+
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 315 YVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ +LF +M L + P+ YN+ IN K +A+ + + M +PNV T N
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
L L E +M EM + E N T I+++ L G E+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 147/352 (41%), Gaps = 45/352 (12%)
Query: 175 MVPQILLKSQHMKIRIEESTFR-VLISALCRIRRVDYAVKILNCMI--EDGFGLDGKICS 231
MV Q +L + + ++ S R V++ L R VD A K+L+ M+ E F +
Sbjct: 167 MVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITAD 226
Query: 232 LIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK 291
+++ + + +T + + + G P + T I L K R A IL+ +
Sbjct: 227 IVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLM 286
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
++ + + +LS + D ++++L +M + + PDV T + IN LCK +VD
Sbjct: 287 KNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 352 EAIQI-------------------------VDSMIKLG-----------------CKPNV 369
EA+++ +D + K+G C PN
Sbjct: 347 EALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNA 406
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
VT N L+ C AG L AK V+ M ++ N+ T ++ G+ + A + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 430 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
M K+ T+ +I C + +A+ +K++ +P A+ + AL+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
IR + T +I L + ++++A IL M E G D + ++I S + V E
Sbjct: 146 IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQ--E 203
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
++ ++ M+ LG + + + + +++ R M A N+M +G++P Y ++L
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G F++M G+ PD T+N ING C+ K+DEA ++ M P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+VV+ T++ + + +EM G+E N TY +L GL ++ EA +L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 428 EEMLKKCFYPR-SSTFDNIICCMCQKGLINEALELMKKIV 466
+ M+ K P+ +S F ++ + G + A E++K +
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 94/191 (49%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+++ I +MK G++ + Y + I+ G Y+ F++M+ G+ P +TYN+ +
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
G +++ A++ + M G P+ T NT++ C + +A+ + EM +
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG 322
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
++ +Y M+ G + + + + EEM P ++T+ ++ +C G + EA +
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 462 MKKIVAKSFAP 472
+K ++AK AP
Sbjct: 383 LKNMMAKHIAP 393
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 167/449 (37%), Gaps = 91/449 (20%)
Query: 121 EFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL 180
E +FV LI YG A +Q++V +F ++ T+ M +
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTI-KSYNSLFKVILRRGRYMMAKRYF 243
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
K + T+ +++ R++ A++ M G D + +I+ C
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
+ AE L V K+G P V+ +T MI+ + +R D L I +M+ GI+P+
Sbjct: 304 KKMDEAEKLFVEMKGNKIG--PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNAT 361
Query: 301 CYTIVLSGI------------------------------------VAEGDYVKLDELFDE 324
Y+ +L G+ GD E+
Sbjct: 362 TYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKA 421
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK----------LGCKPNVVTCNT 374
M L + + Y V I CK + + AI+++D++I+ L +P+ N
Sbjct: 422 MATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY--NP 479
Query: 375 LLGALCEAGDLSKA---------KGV-------------------------MKEMGLKGV 400
++ LC G +KA +GV +K M +GV
Sbjct: 480 IIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
+ Y +++ + K E G+A L+ M++ P SS F ++I + + G + A
Sbjct: 540 PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASR 599
Query: 461 LMKKIVAKSFAPG------ARAWEALLLH 483
+M ++ K+ A+ EALL+
Sbjct: 600 VMMIMIDKNVGIEDNMDLIAKILEALLMR 628
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 136/336 (40%), Gaps = 52/336 (15%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIE--------DGFGLDGKI 229
++L + + E + VLI C+ + A+K+L+ +IE D ++
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA 476
Query: 230 CSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD---FTDMIRFLVKEERGMDALYI 286
+ II LC AE L R+L GV D ++IR KE + I
Sbjct: 477 YNPIIEYLCNNGQTAKAEVL-----FRQL-MKRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 346
L M + G+ + Y +++ +++G+ D M+ G +PD + I L +
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 347 QNKVDEAIQIVDSMI--KLGCKPNVVTCNTLLGALCEAGDLSKAKG-------------- 390
+V A +++ MI +G + N+ +L AL G + +A G
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL 650
Query: 391 -----VMKEMGL-------------KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
V+ E G + + L +Y +LD L+G + A +L ++++
Sbjct: 651 DSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIME 710
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
K + D +I + Q+G +A +++ +++ K
Sbjct: 711 KGSSTDWKSSDELIKSLNQEGNTKQA-DVLSRMIKK 745
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 41/329 (12%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL--IISSLCEQNDVTSA-- 246
S+F ++S +C++ +V +A I++ M FG + + S +I C D+ SA
Sbjct: 55 HRSSFNSVVSFVCKLGQVKFAEDIVHSMPR--FGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 247 ----------------------------------EALVVWGDMRKLGFCPGVMDFTDMIR 272
E V G M K P V+ ++ I
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWID 171
Query: 273 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 332
K AL + MK+D + P+VV +T ++ G GD L+ EM + +
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
+V TY I+G CK+ ++ A ++ M++ +PN + T++ + GD A +
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
+M +G+ L++ Y +++ GL G ++ EA+ ++E+M K P F ++ +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 453 GLINEALELMKKIVAKSFAPGARAWEALL 481
G + A+ + K++ + F P A ++
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 160/386 (41%), Gaps = 17/386 (4%)
Query: 81 CDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDA 140
C P Y I T + LQ ++R + F LI Y A ++ A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR-DALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 141 VDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEEST--FRVL 198
V L+ + R R + V M + S+ ++ R+E ++ + +
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGE---MQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 199 ISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKL 258
I + D A+K L M+ G LD +IIS LC + A +V DM K
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV--EDMEKS 332
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
P ++ FT M+ K R A+ + +++ + G +PDVV + ++ GI G
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ---- 388
Query: 319 DELFDEMLVLGLIPDV--YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
E +V I Y V I+ LCK+ E ++ + + G P+ + +
Sbjct: 389 ---LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
LC+ G+L A + M +G+ L+L Y ++ GL K + EA + +EML
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 437 PRSSTFDNIICCMCQKGLINEALELM 462
P S+ FD +I ++G + A +L+
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 12/297 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ I C+ + A+K + M D + + +I C+ D+ A +L +
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL--YK 222
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+MR++ V+ +T +I K+ A + ++M +D ++P+ + YT ++ G G
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D + +ML G+ D+ Y V I+GLC K+ EA +IV+ M K P++V
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
T++ A ++G + A + ++ +G E ++ M+DG+ ++ EA +
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF------ 396
Query: 434 CFYPRSST-FDNIICCMCQKGLINEALELMKKIVAKSFAPGA---RAWEALLLHSGS 486
C + + +I +C++G E L KI P +W A L G+
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/445 (19%), Positives = 178/445 (40%), Gaps = 42/445 (9%)
Query: 72 LIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY 131
++ S + C+P +Y LI ++ VL+ L F I + F
Sbjct: 78 IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFN 137
Query: 132 GLAD-RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRI 190
G + ++ D V ++ + C+P V Q+ LKS H R
Sbjct: 138 GFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL-----QLALKSFHSMKRD 192
Query: 191 EES----TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
S TF LI C+ ++ AV + M L+ + +I C++ ++ A
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
E + + M + P + +T +I + +A+ L +M G++ D+ Y +++
Sbjct: 253 EEM--YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
SG+ G + E+ ++M L+PD+ + +N K ++ A+ + +I+ G +
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Query: 367 PNVVTCNT------------------------------LLGALCEAGDLSKAKGVMKEMG 396
P+VV +T L+ ALC+ GD + + + ++
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 397 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
G+ + Y + GL + + +A L M+++ + +I + KGL+
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV 490
Query: 457 EALELMKKIVAKSFAPGARAWEALL 481
EA ++ +++ +P + ++ L+
Sbjct: 491 EARQVFDEMLNSGISPDSAVFDLLI 515
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 37/272 (13%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EAL +RK P I L+ G+ +L L + G P + V+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------ 360
S + G +++ M G PDV +YN I+G C+ + A +++S+
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 361 --------------------------IKLG-----CKPNVVTCNTLLGALCEAGDLSKAK 389
+ +G C PNVVT +T + C++G+L A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
M + N+ T+ ++DG ++ A L +EM + T+ +I
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 450 CQKGLINEALELMKKIVAKSFAPGARAWEALL 481
C+KG + A E+ ++V P + + ++
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I+ + TF +LI C+ R+ D A +++ M F D + + + C++ D
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
++ +MR+ G P V+ +T ++ L K ++ +AL + +MK+DG PD Y+ ++
Sbjct: 329 EML--EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIH 386
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL---G 364
+ G + E+F++M G+ DV YN I+ ++ + A++++ M
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
C PNV T LL C + ++ M V +++ TY +++ GL ++ EA
Sbjct: 447 CSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEAC 506
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
L EE ++K PR ST ++ + +K + L++ + +K+
Sbjct: 507 LFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKT 551
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
K + +DA L K G+K D + ++ +V E E+F + L + PD
Sbjct: 218 KYNKAVDAF--LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFDTIKPDAR 274
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
T+N+ I+G CK K D+A ++D M P+VVT + + A C+ GD + +++EM
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
G N+ TY I++ L ++ EA + E+M + P + + ++I + + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 456 NEALELMKKIVAKSFAPGARAWEALL---LHSGSD 487
+A E+ + + + + ++ LH D
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 219 IEDGFGLDGKICSL--IISSLCEQNDVTSA-EALVVWGDMRKLGFCPGVMDFTDMIRFLV 275
+E +G+ ++ ++ +L ++N + A E + D K P F +I
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK----PDARTFNILIHGFC 284
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
K + DA +++ MK PDVV YT + EGD+ +++E+ +EM G P+V
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
TY + ++ L K +V EA+ + + M + GC P+ ++L+ L + G A + ++M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 396 GLKGVELNLHTYRIMLDGLVGKA--------------EIGEA------------------ 423
+GV ++ Y M+ + + E GE+
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 424 ------SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+LL M+K ST+ +I +C G + EA ++ V K P
Sbjct: 465 KKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 12/213 (5%)
Query: 281 MDALYILNQMKQ---------DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 331
MDAL N ++ D IKPD + I++ G + + D M V
Sbjct: 246 MDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
PDV TY ++ CK+ ++++ M + GC PNVVT ++ +L ++ +++A GV
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
++M G + Y ++ L +A+ + E+M + ++ +I
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Query: 452 KGLINEALELMKKI---VAKSFAPGARAWEALL 481
AL L+K++ +S +P + LL
Sbjct: 426 HSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 26/308 (8%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ-------------- 240
F +LI + + +D AV ++ + G C+ +I+ + +
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 241 --NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKP 297
+DV+ EA + G ++ P F M+ +E I +M+++ G P
Sbjct: 225 GLDDVSVDEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSP 279
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+V Y +++ A G + +++++EM V G++ D+ YN I GLC +V +A ++
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-- 415
M G + +T L+ C+AGD+ V +EM KG E + T +++GL
Sbjct: 340 RDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDD 399
Query: 416 --GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
G+ + A ++ + + + FYP + ++ ++ +C+ G ++ AL + ++V K F P
Sbjct: 400 RDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPS 459
Query: 474 ARAWEALL 481
+ A +
Sbjct: 460 QETYRAFI 467
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 44/222 (19%)
Query: 251 VWGDMRK-LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+W +M + +G P V + ++ +A + +MK G+ D+V Y ++ G+
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+ + VK ELF +M + G+ TY +NG CK VD + + M + G + +
Sbjct: 327 CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADG 386
Query: 370 VTCNTLLGALC---------------------------------------EAGDLSKAKG 390
+T L+ LC E G + +A
Sbjct: 387 LTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALN 446
Query: 391 VMKEMGLKGVELNLHTYRIMLD--GLVGKAEIGEASLLLEEM 430
+ EM KG + + TYR +D G+VG E ++LL EM
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGYGIVGDEET--SALLAIEM 486
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 70 STLIDSFKSYS----CDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFV 125
S L+ +++ YS PT + Y +I +I V+ ++ ++ E F
Sbjct: 76 SFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFY 135
Query: 126 YLIRFYG-LADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQ 184
L+R YG LA RI A+++ F +P F C P+
Sbjct: 136 NLMRIYGNLAGRINRAIEILFGMPDFGCWPS----------------------------- 166
Query: 185 HMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVT 244
+F +++ L + D KI + G +D +++I LCE ++
Sbjct: 167 -------SKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 245 SAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTI 304
+A L+ + + P VM F+ +IR + + +A +L +M+++ I+PD + + I
Sbjct: 220 AALQLL--DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
++SG+ +G + +L + M V G P+ TY + GL + + EA +++ MI G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
+P+ ++ ++ LCE + + V+++M
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M G P F ++ LV + + I + G++ D C I++ G+ G+
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+L DE P+V T++ I G C + K +EA ++++ M K +P+ +T N
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ L + G + + +++ M +KG E N TY+ +L GL+ K EA ++ +M+
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
P ++ ++ +C+ + E +++++V F P W
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A+ IL M G P + +L+ +V+ + ++ ++F LG+ D N+ I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
GLC+ ++ A+Q++D + +PNV+T + L+ C G +A +++ M + +E
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ T+ I++ GL K + E LLE M K P T+ ++ + K EA E+M
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 463 KKIVAKSFAPGARAWEALLL 482
++++ P +++ ++L
Sbjct: 331 SQMISWGMRPSFLSYKKMVL 350
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 133/303 (43%), Gaps = 1/303 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ LI+A R R + ++++L+ M + + +I++ C + + L ++
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFA 236
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+MR G P ++ + ++ G +A + M GI PD+ Y+ ++
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K+ +L EM G +PD+ +YNV + K + EA+ + M GC PN T +
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
LL ++G + + EM + + TY I+++ E L +M+++
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 493
P T++ II + GL +A ++++ + A P ++A+ ++ G Y E
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 494 TFA 496
A
Sbjct: 477 LVA 479
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 133/297 (44%), Gaps = 7/297 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E + ++IS L R +D +++ + M G + +I++ ++ L +
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS--LEL 198
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMD---ALYILNQMKQDGIKPDVVCYTIVLSG 308
M+ P ++ + +I + G+D L + +M+ +GI+PD+V Y +LS
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARG--GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G + + +F M G++PD+ TY+ + K ++++ ++ M G P+
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ + N LL A ++G + +A GV +M G N +TY ++L+ + L
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
EM P ++T++ +I + G E + L +V ++ P +E ++ G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 158/387 (40%), Gaps = 5/387 (1%)
Query: 81 CDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDA 140
C P + Y +I L L V D + + F + LI YG R + +
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPS-QGVSRSVFSYTALINAYGRNGRYETS 195
Query: 141 VDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLIS 200
++L R+ + +P++ + + + +H I+ + T+ L+S
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 201 ALCRIRRV-DYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG 259
A C IR + D A + M + G D S ++ + + + L+ G+M G
Sbjct: 256 A-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL--GEMASGG 312
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
P + + ++ K +A+ + +QM+ G P+ Y+++L+ G Y +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
+LF EM PD TYN+ I + E + + M++ +P++ T ++ A
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
+ G A+ +++ M + + Y +++ A EA + M + P
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 440 STFDNIICCMCQKGLINEALELMKKIV 466
TF +++ + GL+ E+ ++ ++V
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLV 519
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 255 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ +C P +T MI L +E L + ++M G+ V YT +++ G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA--IQIVDSMIKLGCKPNVVT 371
Y EL D M + P + TYN IN C + +D + + M G +P++VT
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
NTLL A G +A+ V + M G+ +L TY +++ + + LL EM
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P ++++ ++ + G I EA+ + ++ A P A + LL
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 6/244 (2%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRI--RRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
Q +LKSQ R STF +L+S CR + ++LN M+ +G D + +
Sbjct: 109 QHILKSQP-NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-G 294
SLCE V A+ L+ ++ + P + +++ L K + +++M+ D
Sbjct: 168 SLCETGRVDEAKDLM--KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+KPD+V +TI++ + + + L ++ G PD + YN + G C +K EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+ M + G +P+ +T NTL+ L +AG + +A+ +K M G E + TY +++G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 415 VGKA 418
K
Sbjct: 346 CRKG 349
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 292 QDGIKPDVVCYTIVLSGI--VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
Q +P + I+LS + + + + M+ GL PD T ++ + LC+ +
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYR 408
VDEA ++ + + P+ T N LL LC+ DL + EM V+ +L ++
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
I++D + + EA L+ ++ F P ++ I+ C +EA+ + KK+ +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 469 SFAPGARAWEALLL 482
P + L+
Sbjct: 295 GVEPDQITYNTLIF 308
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 40/278 (14%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
ST+R L LC RR D ++L+ M +
Sbjct: 76 RSTYRALFHKLCVFRRFDTVYQLLDEMPD------------------------------- 104
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+G P F +IR + + +++ + + GIKP + + +L +V
Sbjct: 105 -----SIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK 159
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
E + + +M+ G+ DVYTY + + GL N++ + +++ M G PN V
Sbjct: 160 EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 219
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
NTLL ALC+ G + +A+ +M EM E N T+ I++ + ++ ++ +LLE+
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
F P T ++ +C +G ++EALE+++++ +K
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 173/442 (39%), Gaps = 46/442 (10%)
Query: 70 STLIDSFKSYSCDP----TPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFV 125
S +++F+ S P + + Y L L + +LD + + IFV
Sbjct: 57 SGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFV 116
Query: 126 YLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQH 185
+IR +G A I+ + + + +F P++ + + +
Sbjct: 117 TIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID---IAREFFTRKM 173
Query: 186 MKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC----- 238
M I T+ +L+ L R+ K+L M G + + + ++ +LC
Sbjct: 174 MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 239 -----------EQNDVT-----SA--------EALVVWGDMRKLGFCPGVMDFTDMIRFL 274
E NDVT SA +++V+ LGF P V+ T ++ L
Sbjct: 234 GRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 275 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 334
E R +AL +L +++ G K DVV ++ G A G F EM G +P+V
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 335 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
TYN+ I G C +D A+ + M + N T NTL+ L G +++
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEM 413
Query: 395 M----GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
M + G ++ Y ++ G + +A L +M K +PR+ + +C
Sbjct: 414 MQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISLC 469
Query: 451 QKGLINEALELMKKIVAKSFAP 472
+KG +++ +++ + P
Sbjct: 470 EKGGMDDLKTAYDQMIGEGGVP 491
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 45/328 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T ++ LC RV A+++L + G +D C+ ++ C + A+ +
Sbjct: 285 TVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI-- 342
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G+ P V + +I AL N MK D I+ + + ++ G+ G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 314 ---DYVKLDELF-DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
D +K+ E+ D V G D YN I G K+N+ ++A++ + M KL P
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLF--PRA 458
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
V + L +LCE G + K +M +G ++ ++ +I E+ L+ +
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIND 518
Query: 430 MLKKCFYPRSSTFDNIICCMCQ-----------------------------------KGL 454
M+ + + PRSSTF+ +I C+ KG
Sbjct: 519 MVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD 578
Query: 455 INEALELMKKIVAKSFAPGARAWEALLL 482
I +A L ++V KS P W +L+
Sbjct: 579 IQKAWLLFSRMVEKSIVPDPSMWSSLMF 606
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 47/274 (17%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIED----GFGLDGKICSLIISSLCEQNDV 243
IR +TF LI L R D +KIL M + G +D C +I ++N
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC--VIYGFYKENRW 441
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCY 302
A ++ M KL P +D + + L E+ GMD L +QM +G P ++
Sbjct: 442 EDALEFLL--KMEKL--FPRAVDRSFKLISLC-EKGGMDDLKTAYDQMIGEGGVPSIIVS 496
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
++ G + EL ++M+ G +P T+N I G CKQ+KV I+ V+ M +
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
GC P+ + N LL LC GD+ K
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQK----------------------------------- 581
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
A LL M++K P S + +++ C+ QK I+
Sbjct: 582 AWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH 615
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 9/276 (3%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+I C+ + A+ L+ M+ G ++ I SLI+ C+ + EAL + + R
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD--MCLEALEKFKEFRD 381
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
+ + + L K R +A +L +MK GI PDV+ YT ++ G +G V
Sbjct: 382 MNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+L DEM+ G+ PD+ TYNV ++GL + +E ++I + M G KPN VT + ++
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
LC A + +A+ + K E N ++ + G E G + + ++ +
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPE-NKASF------VKGYCEAGLSKKAYKAFVRLEYPL 554
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
R S + + +C +G + +A +++KK+ A PG
Sbjct: 555 RKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPG 590
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 229 ICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN 288
+C +I + C+ N+V EA V++ M + G P + +T MI + A +
Sbjct: 593 MCGKMIGAFCKLNNVR--EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFE 650
Query: 289 QMKQDGIKPDVVCYTIVLS-------------GIVAEGDYVKLDELFDEMLVLGLIPDVY 335
MKQ GIKPDVV YT++L + E K E+ E G+ DV
Sbjct: 651 DMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVV 710
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
Y V I+ CK N +++A ++ D MI G +P++V TL+ + G + A ++ E+
Sbjct: 711 CYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Query: 396 GLK 398
K
Sbjct: 771 SKK 773
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+I A C++ V A + + M+E G D +++I + C N++ AE+L + DM++
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESL--FEDMKQ 654
Query: 258 LGFCPGVMDFTDMI-RFL-----------VKEERG-MDALYILNQMKQDGIKPDVVCYTI 304
G P V+ +T ++ R+L V+ E G A +L + GI DVVCYT+
Sbjct: 655 RGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTV 714
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
++ + + ELFD M+ GL PD+ Y I+ ++ +D A+ +V + K
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 166/439 (37%), Gaps = 66/439 (15%)
Query: 66 PFLLSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIP----------------PVLD 109
P L + + K + P NAY L++ L T+ DI V+D
Sbjct: 70 PNLALSFLRQLKEHGVSPNVNAYATLVRIL--TTWGLDIKLDSVLVELIKNEERGFTVMD 127
Query: 110 HLERV-EKFETPEFIFVY------LIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXX 162
+E + E+ E + FV L++ Y +A D+ F+ R C +
Sbjct: 128 LIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFL 187
Query: 163 XXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG 222
M+ + + + + + E T+ +++ ALCR ++ A +L E
Sbjct: 188 MNRMTEFGKIG-MLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL-IENESV 245
Query: 223 FGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMD 282
FG I+ LC + A AL++ RK + G D +R ++ GM
Sbjct: 246 FGY-----KTFINGLCVTGETEKAVALILELIDRK--YLAG-----DDLRAVL----GMV 289
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
N+MK + ++ EM +G DVY I+
Sbjct: 290 VRGFCNEMKMKAAESVII-----------------------EMEEIGFGLDVYACLAVID 326
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
CK + EA+ +D M+ G K N V + +L C+ +A KE + L
Sbjct: 327 RYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFL 386
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ Y + D L + EA LL+EM + P + +I C +G + +AL+L+
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 463 KKIVAKSFAPGARAWEALL 481
+++ +P + L+
Sbjct: 447 DEMIGNGMSPDLITYNVLV 465
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 121/301 (40%), Gaps = 22/301 (7%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL+S L R + ++I M +G + S+II LC V AE
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ + CP + ++ + A +++ K Y + + EG
Sbjct: 520 EQK----CPE--NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKS---VYIKLFFSLCIEG 570
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K ++ +M + P I CK N V EA + D+M++ G P++ T
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG-----------KAEIG- 421
++ C +L KA+ + ++M +G++ ++ TY ++LD + + E+G
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 422 -EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
+AS +L E + +I C+ + +A EL +++ P A+ L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 481 L 481
+
Sbjct: 751 I 751
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 154/383 (40%), Gaps = 73/383 (19%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRI 147
Y I+ L I VL + ++ + ++ +F+ + ++ YG + + A LF +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV-IRIMLLYGYSGMAEHAHKLFDEM 148
Query: 148 PRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRR 207
P C TV +F L+SA ++
Sbjct: 149 PELNCERTVK------------------------------------SFNALLSAYVNSKK 172
Query: 208 VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDF 267
+D A+K + E KLG P ++ +
Sbjct: 173 LDEAMKTFKELPE------------------------------------KLGITPDLVTY 196
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 327
MI+ L ++ D L I +++++G +PD++ + +L +V+ D ++D M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 328 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
L P++ +YN + GL + K +A+ ++D M G P+V T N L+ A +L +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
EM KG+ + TY +++ L K ++ A + EE +K R + + ++
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
Query: 448 CMCQKGLINEALELMKKIVAKSF 470
+ G I+EA +L+K +S+
Sbjct: 377 RLMGAGKIDEATQLVKNGKLQSY 399
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 289 QMKQDGIKP-DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 347
Q K D IK D V ++L G ++ +LFDEM L V ++N ++
Sbjct: 113 QKKFDDIKSEDFVIRIMLLYGYSGMAEHAH--KLFDEMPELNCERTVKSFNALLSAYVNS 170
Query: 348 NKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
K+DEA++ + KLG P++VT NT++ ALC G + + +E+ G E +L +
Sbjct: 171 KKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLIS 230
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
+ +L+ + E + + M K P ++++ + + + +AL L+ +
Sbjct: 231 FNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK 290
Query: 467 AKSFAPGARAWEALL 481
+ +P + AL+
Sbjct: 291 TEGISPDVHTYNALI 305
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ K+ + F+ L+SALCR + V A ++ C +D + D K +++++ C N +
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAKSFNIVLNGWC--NVI 280
Query: 244 TSA-EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
S EA VW +M +G V+ ++ MI K L + ++MK++ I+PD Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
V+ + + L M G+ P+V TYN I LCK K +EA Q+ D M+
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ G P + T + + L ++ + M++M G E + TY +++ L +
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFD 457
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
LL +EM +K P S++ +I + G I EA K++ K P
Sbjct: 458 NVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ +IS + ++ +K+ + M ++ D K+ + ++ +L + + V+ A L+
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ K G P V+ + +I+ L K + +A + ++M + G+ P + Y + I+ G
Sbjct: 364 EEEK-GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTG 421
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ V EL +M +G P V TY + I LC+ D + + D M + P++ +
Sbjct: 422 EEVF--ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
++ L G + +A G KEM KG+ N + ++ GK
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK 523
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 5/294 (1%)
Query: 175 MVPQILLKSQHMKIR-IEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICS 231
MV ++L + MK IE + T+ L++ L VD A ++ M D +
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 232 LIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK 291
+I C+ + +A+ DM G + + MI+ + + + +M
Sbjct: 262 TMIKGYCKAGQ--TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 292 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
+ GI+ +++V+ G+ EG + +F+ M+ G P+V Y V I+G K V+
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 352 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 411
+AI+++ MI G KP+VVT + ++ LC+ G + +A G+ +N Y ++
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
DGL + EA L EEM +K S ++ +I + ++EA+ L K++
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 99/189 (52%)
Query: 284 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 343
L++ +MK++GI+P + Y +++G+V+ + +F+ M + PD+ TYN I G
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266
Query: 344 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 403
CK + +A++ + M G + + +T T++ A D + +EM KG+++
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 404 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 463
H + +++ GL + ++ E + E M++K P + + +I + G + +A+ L+
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 464 KIVAKSFAP 472
+++ + F P
Sbjct: 387 RMIDEGFKP 395
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 10/245 (4%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+ + VLI + V+ A+++L+ MI++GF D S++++ LC+ V EAL +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE--EALDYF 420
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
R G M ++ +I L K R +A + +M + G D CY ++
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK- 479
Query: 313 GDYVKLDE---LFDEMLVL-GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ K+DE LF M G VYTY + ++G+ K+++ +EA+++ D MI G P
Sbjct: 480 --HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
L LC +G +++A ++ E+ GV L+ M++ L I EA L +
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLAD 596
Query: 429 EMLKK 433
+ ++
Sbjct: 597 GITER 601
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
G+ P +YTYN +NGL VD A ++ + M KP++VT NT++ C+AG KA
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
+++M +G E + TY M+ ++ G L +EM +K F +I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 449 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+C++G +NE + + ++ K P + L+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 143/341 (41%), Gaps = 45/341 (13%)
Query: 85 PNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEF-IFVYLIRFYGLADRIQDAVDL 143
P+A+ +I L L + V +++ + K P I+ LI Y + ++DA+ L
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENM--IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 144 FFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALC 203
R+ P V T+ V+++ LC
Sbjct: 385 LHRMIDEGFKPDVV------------------------------------TYSVVVNGLC 408
Query: 204 RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPG 263
+ RV+ A+ + DG ++ S +I L + V AE L + +M + G
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL--FEEMSEKGCTRD 466
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ +I K + +A+ + +M+++ G V YTI+LSG+ E + +L+
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW 526
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
D M+ G+ P + GLC KV A +I+D + +G + C ++ LC+A
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKA 585
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIG 421
G + +A + + +G E+ +M++ L VGKA++
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 8/275 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS---SLCEQNDVTSAEALV 250
T+ LI++ + D A+ L M +D D + S +I LC+ ++A+
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY-----SKAIS 246
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ +++ G P ++ + MI K + +A ++ +M + G+ P+ V Y+ +LS V
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+++ +F EM + D+ T N+ I+ + + V EA ++ S+ K+ +PNVV
Sbjct: 307 ENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVV 366
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
+ NT+L EA +A + + M K +E N+ TY M+ E +A+ L++EM
Sbjct: 367 SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ P + T+ II + G ++ A L +K+
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ +MR+ P ++ +I KE AL L +M+QD + D+V Y+ ++
Sbjct: 177 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 236
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
DY K +F + G+ PD+ YN IN K EA ++ M + G PN V
Sbjct: 237 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
+ +TLL E +A V EM L+L T IM+D + EA L +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTY 490
K P +++ I+ + L EA+ L + + K + ++ G + +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 491 SETT 494
+ T
Sbjct: 417 EKAT 420
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 270 MIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 328
M+ L +E +L +L+ + ++ P V Y +VL ++ + LFDEM
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
L PD YTY+ I K+ D A+ + M + ++V + L+ D SKA
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKKCFYPRSSTFDNIIC 447
+ + G+ +L Y M++ + GKA++ EA LL++EM + P + ++ ++
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMIN-VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 448 CMCQKGLINEALELMKKI 465
+ EAL + ++
Sbjct: 304 VYVENHKFLEALSVFAEM 321
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
++ L+S + A+ + M E LD C+++I + + V A+ L W
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF-WS 355
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+RK+ P V+ + ++R + E +A+++ M++ I+ +VV Y ++
Sbjct: 356 -LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ K L EM G+ P+ TY+ I+ K K+D A + + G + + V
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 474
Query: 374 TLLGALCEAGDLSKAKGVMKEMGL 397
T++ A G + AK ++ E+ L
Sbjct: 475 TMIVAYERVGLMGHAKRLLHELKL 498
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG------------ 294
EA ++ +M + G P + ++ ++ V+ + ++AL + +MK+
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 295 -----------------------IKPDVVCYTIVLSGIVAEGD-YVKLDELFDEMLVLGL 330
I+P+VV Y +L + E + + + LF M +
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR-VYGEAELFGEAIHLFRLMQRKDI 396
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
+V TYN I K + ++A +V M G +PN +T +T++ +AG L +A
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
+ +++ GVE++ Y+ M+ +G A LL E+ PR + I +
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA----ITILA 512
Query: 451 QKGLINEA 458
+ G EA
Sbjct: 513 KAGRTEEA 520
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 247 EALVVWGDMRKL-GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
EA V+ +M K+ G P + + MI+ + + I+ +M++ GIKP+ + ++
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+SG AE ++ ++ M G+ V TYN+ I LCK+ K EA ++D M+ G
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
KPN VT + L+ C D +AK + K M +G + + Y ++ L + A
Sbjct: 289 KPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALS 348
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
L +E ++K + P S +++ + + + EA EL+ ++ K F W
Sbjct: 349 LCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELW 399
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 222 GFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
G D + + +I CE +S+ ++V +M + G P F MI E++
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIV--AEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+ +L MK G+ V Y I + + + L D ML G+ P+ TY+ I
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
+G C ++ +EA ++ M+ GCKP+ TL+ LC+ GD A + KE K
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+ + +++GL +++ EA L+ ++ +K
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
I+ + + I+ S+F ++IS + D K+L M + G + ++ I SLC
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
++ A+AL+ M G P + ++ +I E+ +A + M G KPD
Sbjct: 269 KRKKSKEAKALL--DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
CY ++ + GD+ L E + +P +NGL K +KV+EA +++
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI- 385
Query: 359 SMIKLGCKPNVVTCNTLLGAL 379
+K NV N + AL
Sbjct: 386 GQVKEKFTRNVELWNEVEAAL 406
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 3/309 (0%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
++L S ++++ + + L R + A K+L+ + + LD + + I+ +
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDA-LYILNQMKQDGIKP 297
+A+ ++ M+++G P ++ + ++ K R L +L++M+ G+K
Sbjct: 222 RTGKY--EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D + VLS EG + E F E+ G P TYN + K EA+ ++
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
M + C + VT N L+ A AG +A GV++ M KGV N TY ++D
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
+ EA L M + P + T++ ++ + +K NE ++++ + + +P W
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 478 EALLLHSGS 486
+L G+
Sbjct: 460 NTMLALCGN 468
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 39/317 (12%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ TF LISA R A K+ M GF + ++++L + D S E ++
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD----------------- 293
DM+ GF P ++ M++ K + I N++K+
Sbjct: 550 --SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 294 ------------------GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
G KPD+V + +LS Y + + + + + GL PD+
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
TYN ++ ++ + +A +I+ ++ K KP++V+ NT++ C G + +A ++ EM
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
+G+ + TY + G E ++E M K P TF ++ C+ G
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKY 787
Query: 456 NEALELMKKIVAKSFAP 472
+EA++ + KI K+F P
Sbjct: 788 SEAMDFVSKI--KTFDP 802
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 170/392 (43%), Gaps = 25/392 (6%)
Query: 98 TSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVX 157
+ L D P+ ++L V + T ++ Y + + A+DLF R+ +PT+
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTT-------ILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 158 XXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCR---IRRV-DYAVK 213
+ +L + + ++ +E T ++SA R +R ++ +
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 214 ILNCMIEDGFGLDGKICSLIISSLCE--QNDVTSAEALVVWGDMRKLGFCPG-VMDFTDM 270
+ +C E G ++ ++L + EAL V +M + CP + + ++
Sbjct: 307 LKSCGYEPG--------TVTYNALLQVFGKAGVYTEALSVLKEMEE-NSCPADSVTYNEL 357
Query: 271 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 330
+ V+ +A ++ M + G+ P+ + YT V+ G + +LF M G
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK-AK 389
+P+ TYN ++ L K+++ +E I+++ M GC PN T NT+L ALC + K
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVN 476
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
V +EM G E + T+ ++ +AS + EM + F +T++ ++ +
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 450 CQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+KG ++ + +K F P ++ +L
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 123/294 (41%), Gaps = 14/294 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I A + + D A+K+ M E G + + ++S L +++ S E + +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS--RSNEMIKMLC 445
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALY--ILNQMKQDGIKPDVVCYTIVLSGIVA 311
DM+ G P + M+ +GMD + +MK G +PD + ++S
Sbjct: 446 DMKSNGCSPNRATWNTMLALC--GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G V +++ EM G V TYN +N L ++ ++ M G KP +
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 372 CNTLLGALCEAGD---LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+ +L + G+ + + + +KE + + L T ++L +A G
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT--LLLANFKCRALAGSERAFT- 620
Query: 429 EMLKKCFY-PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ KK Y P F++++ + + ++A +++ I +P + +L+
Sbjct: 621 -LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTI 304
EAL + M++ P V + +I L + A ++L+QM+ G + PD YTI
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 305 VLSGIVAEGDYV-----------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
++S G + + +F EML G +PDV TYN I+G CK N++ A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLD 412
+++ + M GC PN VT N+ + ++ A +M+ M G + TY ++
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIH 362
Query: 413 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
LV EA L+ EM++ PR T+ + + +GL + E + K
Sbjct: 363 ALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHK 414
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 32/243 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGL--DGKICSLIISSLCEQNDVTSAEALVV 251
+ +I+ALCR+ A +L+ M GF D +++ISS C T +
Sbjct: 202 AYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAI- 260
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
R +A + +M G PDVV Y ++ G
Sbjct: 261 -------------------------RRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK-PNVV 370
+ ELF++M G +P+ TYN +I N+++ AI+++ +M KLG P
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS 355
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T L+ AL E ++A+ ++ EM G+ +TY+++ D L + G AS L EE+
Sbjct: 356 TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSE---GLASTLDEEL 412
Query: 431 LKK 433
K+
Sbjct: 413 HKR 415
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 344 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL- 402
L ++ V EA+ M + CKP+V NT++ ALC G+ KA+ ++ +M L G
Sbjct: 175 LGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYP 234
Query: 403 -NLHTYRIMLDGLVG-----------KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
+ +TY I++ + + EA+ + EML + F P T++ +I C
Sbjct: 235 PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 451 QKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
+ I ALEL + + K P + + + +
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 39/326 (11%)
Query: 86 NAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFF 145
+ Y ++ L +I +LD + R + + + LI YG A+ +++A+++F
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVR-DGCKPNTVTYNRLIHSYGRANYLKEAMNVFN 418
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
++ C P + T+ LI +
Sbjct: 419 QMQEAGCEP------------------------------------DRVTYCTLIDIHAKA 442
Query: 206 RRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
+D A+ + M E G D S+II+ L + + +A L +M G P ++
Sbjct: 443 GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC--EMVGQGCTPNLV 500
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
F MI K AL + M+ G +PD V Y+IV+ + G + + +F EM
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
+PD Y + ++ K VD+A Q +M++ G +PNV TCN+LL +
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIML 411
S+A +++ M G+ +L TY ++L
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 4/289 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++ L R ++ K+L+ M+ DG + + +I S N + EA+ V+
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK--EAMNVFN 418
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G P + + +I K A+ + +M++ G+ PD Y+++++ + G
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
LF EM+ G P++ T+N+ I K + A+++ M G +P+ VT +
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYS 538
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLK 432
++ L G L +A+GV EM K + Y +++D L GKA + +A + ML+
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD-LWGKAGNVDKAWQWYQAMLQ 597
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T ++++ + ++EA L++ ++A P + + LL
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+Q G K D YT ++ + + ++++L DEM+ G P+ TYN I+ + N +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
EA+ + + M + GC+P+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
++ L + A L EM+ + P TF+ +I + AL+L + + F
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 471 AP 472
P
Sbjct: 531 QP 532
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 8/270 (2%)
Query: 205 IRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGV 264
+RR + + GF +D + ++ + ++ +A W R+ GF
Sbjct: 304 LRRFKWGHAAEEALHNFGFRMDAYQANQVLKQM---DNYANALGFFYWLK-RQPGFKHDG 359
Query: 265 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD-ELFD 323
+T M+ L + ++ + +L++M +DG KP+ V Y ++ +Y+K +F+
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY-GRANYLKEAMNVFN 418
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
+M G PD TY I+ K +D A+ + M + G P+ T + ++ L +AG
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFYPRSSTF 442
L A + EM +G NL T+ IM+ L KA E +L L +M F P T+
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAP 472
++ + G + EA + ++ K++ P
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 9/294 (3%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGK----ICSLIISSLCEQNDVTSAE 247
E FR I A CR R++DYA+ + M +DGK + + +++ + D+ +
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKR---LIDGKPNVGVYNTVVNGYVKSGDMD--K 211
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
AL + M K P V F +I + + AL + +MK+ G +P+VV + ++
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G ++ G + ++ EM+ LG T + ++GLC++ +VD+A +V ++ P
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+ +L+ LC +A +M+E+ KG +++GL +AS +
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
E+M+ P S TF+ ++ +C +A L +K + P + L+
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+F LI +++ VK+ MIE G C +++ LC + V A LV+
Sbjct: 265 SFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL-- 322
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
D+ P D+ ++ L E + + A+ ++ ++ + G P + T ++ G+ G
Sbjct: 323 DLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSG 382
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
K ++M+ G++PD T+N+ + LC + +A ++ G +P+ T +
Sbjct: 383 RTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYH 442
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
L+ + G + + ++ EM K + ++ TY ++DGL
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 3/269 (1%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKS 183
F LI Y + + A+DLF + C P V V ++ +
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV-KMAYEM 289
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ R E+T +L+ LCR RVD A ++ ++ ++ LC +N
Sbjct: 290 IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGEN-- 347
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ A+ + ++ K G P + T ++ L K R A + +M GI PD V +
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
++L + + + L G PD TY+V ++G K+ + E +V+ M+
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
P++ T N L+ L G S+ + M
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGKFSRKQVRM 496
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 38/255 (14%)
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
GV +F ++R E +A I ++ PDV I+L G GD + +
Sbjct: 175 GVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI---------------------------- 354
EM+ G P+ TY + I+G CK+ EA+
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 355 -------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
Q+ D + K G P+ N L+ +L + GD+S A VMKEM KG+E + T+
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 408 RIMLDGLVGKAEIGEASL--LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
M G++ E G + ++M ++ P++ T ++ C G +N L+L K +
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 466 VAKSFAPGARAWEAL 480
+ K + P A E L
Sbjct: 414 LEKGYCPHGHALELL 428
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 8/299 (2%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI------CSLIISSLCEQN 241
IR+ F LI CR+ R D A+K+ M G D S++ + C+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
T L ++ M++ + +I L K R DA N + + ++PD+V
Sbjct: 552 KPTIG--LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y ++ G + + + +F+ + V P+ T + I+ LCK N +D AI++ M
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
+ G KPN VT L+ ++ D+ + + +EM KG+ ++ +Y I++DGL + +
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
EA+ + + + P + +I C+ G + EA L + ++ P AL
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 8/293 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ VL+ L + + +A++ M+ L+ + + +I C N EAL V+
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD--EALKVFRL 521
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEE------RGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
M G P V FT ++R + E+ + L + + M+++ I D+ +V+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ + F+ ++ + PD+ TYN I G C ++DEA +I + + PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VT L+ LC+ D+ A + M KG + N TY ++D +I + L E
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
EM +K P ++ II +C++G ++EA + + + P A+ L+
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 140/298 (46%), Gaps = 8/298 (2%)
Query: 190 IEESTFRVLISALCRIRR------VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ E FRV I + ++ + ++ A ++L+ +++ G + +I+ C++ ++
Sbjct: 243 VMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM 302
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A L + M + G P ++ ++ +I K + +Q G+K DVV ++
Sbjct: 303 DRAFDL--FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+ V GD ++ ML G+ P+V TY + I GLC+ ++ EA + ++K
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G +P++VT ++L+ C+ G+L + ++M G ++ Y +++DGL + + A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ML + F+++I C+ +EAL++ + + P + ++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 176/418 (42%), Gaps = 14/418 (3%)
Query: 66 PFLLSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFV 125
P T+ + P+ +Y L+ + I ++ +E+ + F
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ-SGTKLDSIFFN 119
Query: 126 YLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXX--XXXXXXXXXMVPQILLKS 183
+I + + ++DAV ++ PT + ++L+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
++ + TF VL+ A C+ ++V+ A +++ M E G D + I + ++ +
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
AE+ VV + K P ++ +E R D L + +MK+ ++ ++V +
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+++G V D +DE+ +L++ +V L K+ +Q++ M +
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVE--------LVGNQKMK--VQVLTLMKEC 349
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
K +V+T +T++ A AG + KA V KEM GV+ + H Y I+ G V E +A
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 409
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
LLE ++ + P F +I C G +++A+ + K+ +P + +E L+
Sbjct: 410 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
C V T ++ L++ R +A + + + G +P ++ YT +L+ + + Y +
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
+ E+ G D +N IN + +++A+Q + M +LG P T NTL+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 381 EAGDLSKAK---GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
AG ++ +M E G V N+ T+ +++ K ++ EA ++++M + P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 438 RSSTFDNIICCMCQKG-LINEALELMKKIVAKSFA-PGAR 475
+ T++ I C QKG + E+++K+V K A P R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 11/216 (5%)
Query: 207 RVDYAVKILNCMIEDGF-------GLDGKICSLIISSLCEQNDVTSAEALVVW--GDMRK 257
RV+ + + N +I +GF G+D +L++ S E+ ++ + + V M++
Sbjct: 290 RVEANLVVFNSLI-NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
V+ ++ ++ A + +M + G+KPD Y+I+ G V + K
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+EL E L++ P+V + I+G C +D+A+++ + M K G PN+ T TL+
Sbjct: 409 AEELL-ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
E KA+ V++ M GV+ T+ ++ +
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 503
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 14/272 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L++ CR ++ ++ ++ G L+ + ++ SLC E ++
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL--N 338
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M + +CP V+ + +I L K A+ QM + PD+V Y VL + EG
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 314 DYVKLDELFDEMLVLGLI------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ D + +LGL+ P + TYN I+GL K+ + +A+++ M+ G P
Sbjct: 399 ------MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
+ +T +L+ C A + +A V+KE +G + TYR+++ GL K EI A ++
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
E ML P + + I+ + + G+ +EA+
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 2/291 (0%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+E T ++ LC ++ A K++ M CS ++ L + + +A+
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLD--KAMC 160
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ M G P + + +I L K+ AL +L M G PDV+ Y V+ +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G+ + + + L G P + TY V + +C+ AI++++ M GC P++V
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T N+L+ C G+L + V++ + G+ELN TY +L L E +L M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ + P T++ +I +C+ L++ A++ +++ + P + +L
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 135/288 (46%), Gaps = 2/288 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ VL+ +CR A+++L M +G D + +++ C + ++ E V
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL--EEVASVIQ 303
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+ G + + ++ L E + ILN M Q P V+ Y I+++G+
Sbjct: 304 HILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKAR 363
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ + F +ML +PD+ TYN + + K+ VD+AI+++ + C P ++T N
Sbjct: 364 LLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+++ L + G + KA + +M G+ + T R ++ G + EA +L+E +
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
R ST+ +I +C+K I A+E+++ ++ P + A++
Sbjct: 484 GNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%)
Query: 286 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
+L Q + G+ P Y ++SG G+Y + E+ M+ P +Y Y I GLC
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
K EA I ++ G P+ V T++ CE G L A+ + EM KG+ N
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
Y +M+ G + EI EML+ + + + +I C G +EA E+ K +
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 466 VAKSFAPGARAWEALL 481
P A + AL+
Sbjct: 415 SETGVTPNAITYNALI 430
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 10/254 (3%)
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE- 239
L + ++ + R LI ALC V ++L ++ G + + +IS CE
Sbjct: 202 LHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEI 261
Query: 240 QNDVTSAEAL---VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
N +E L + W P + + +I+ L ++ ++A I +K G
Sbjct: 262 GNYACMSEVLHTMIAWNHF------PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
PD V YT ++ G +G +L+ EM+ G+ P+ + YNV I+G K+ ++
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ M++ G +++CNT++ C G +A + K M GV N TY ++ G
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 417 KAEIGEASLLLEEM 430
+ ++ + L +E+
Sbjct: 436 ENKVEKGLKLYKEL 449
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
LIS C I ++L+ MI I II LC EA ++ +++
Sbjct: 254 LISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKK--QLEAYCIFKNLKD 311
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G+ P + +T MIR ++ A + +M + G++P+ Y +++ G G+
Sbjct: 312 KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISL 371
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
++ ++EML G + + N I G C K DEA +I +M + G PN +T N L+
Sbjct: 372 VEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
C+ + K + KE+ G++ + Y ++ L
Sbjct: 432 GFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 5/285 (1%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
VL+ L + R++D ++ M+E F D + +I +LC+ DV+ L+ G
Sbjct: 186 VLLGCL-KARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQG--L 240
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
K G PG + +I + +L+ M P + Y ++ G+ +
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
+ +F + G PD Y I G C++ + A ++ MIK G +PN N ++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
+ G++S + EM G + + M+ G + EA + + M +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + T++ +I C++ + + L+L K++ A P A+ AL+
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 305 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
+L G + +G VK + F + G P+ Y+ L ++ V+EAI++ + + +G
Sbjct: 118 ILFGALLDGKAVKAAKSF--LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMG 175
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI--MLDGLVGKAEIGE 422
+VVTCN++L +A L + + KEM VE + RI ++ L ++ E
Sbjct: 176 ISSSVVTCNSVLLGCLKARKLDRFWELHKEM----VESEFDSERIRCLIRALCDGGDVSE 231
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
LL++ LK+ P + +I C+ G E++ ++A + P ++ ++
Sbjct: 232 GYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKII 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G KP+ + + EG + E+++ + +G+ V T N + G K K+D
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
++ M++ + C L+ ALC+ GD+S+ ++K+ +G++ + Y ++ G
Sbjct: 200 WELHKEMVESEFDSERIRC--LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
S +L M+ +P + II +C EA + K + K +AP
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
F +L+ ++ V+ ++ +++ GF + C+ +++ L + + + + V+
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM--EDCWQVYS 225
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M ++G P F + + + L +M+++G +PD+V Y ++S G
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ L+ M ++PD+ TY I GLCK +V EA Q M+ G KP+ ++ N
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ A C+ G + ++K ++ EM V + T +++++G V + + A + E+ +
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRL 405
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
D +I +CQ+G A L+ +I+ +
Sbjct: 406 KVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
ND E M + GF P ++ + ++ + R +A Y+ M + + PD+V
Sbjct: 248 NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLV 307
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
YT ++ G+ +G + + F M+ G+ PD +YN I CK+ + ++ +++ M
Sbjct: 308 TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ P+ TC ++ G L A + E+ V++ ++ L + +
Sbjct: 368 LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKP 427
Query: 421 GEASLLLEEMLKKCFY-PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
A LL+ ++++ + + T++N+I + + I EAL L K+ ++ A+ + A
Sbjct: 428 FAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 480 LL 481
L+
Sbjct: 488 LI 489
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%)
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
+++ M +G+ P+ YT+N+ N C + E ++ M + G +P++VT NTL+ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
C G L +A + K M + V +L TY ++ GL + EA M+ + P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+++ +I C++G++ ++ +L+ +++ S P
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 157/384 (40%), Gaps = 16/384 (4%)
Query: 85 PNAYYFLIKTLV--NTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVD 142
PN Y F I T V N S+ +++ L+ +E E FE + L+ Y R+++A
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEE-EGFEPDLVTYNTLVSSYCRRGRLKEAFY 292
Query: 143 LFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISAL 202
L+ + R R P + Q + I+ + ++ LI A
Sbjct: 293 LYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE-AHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 203 CRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCP 262
C+ + + K+L+ M+ + D C +I+ + + SA VV K+
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF 411
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGI----VAEGDYVK 317
V DF +I L +E + A ++L+++ +++G + Y ++ + E V
Sbjct: 412 EVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVL 469
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+L ++ VL D TY I LC+ + EA ++ M KP+ C L+
Sbjct: 470 KGKLKNQNQVL----DAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVY 525
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FY 436
C+ D KA+ ++ ++ + +Y ++ + + +L L+E +++ F
Sbjct: 526 GYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFV 585
Query: 437 PRSSTFDNIICCMCQKGLINEALE 460
P T +I + Q L N E
Sbjct: 586 PNRLTCKYLIQVLEQPSLPNHLPE 609
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 140/302 (46%), Gaps = 16/302 (5%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+L + + + E+S + LI A CR+ V A + ++ D +++I++ C
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
N+ A AL + DM++ P V+ ++ L+ + +D + +M+ + PD
Sbjct: 647 RLNEPKQAYAL--FEDMKRRDVKPDVVTYS----VLLNSDPELD---MKREMEAFDVIPD 697
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
VV YTI+++ D K+ LF +M ++PDV TY V + ++N E
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE------ 751
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M KP+V L+ C+ GDL +AK + +M GV+ + Y ++
Sbjct: 752 -MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
+ EA ++ + M++ P + +I C+ G + +A++L+K+++ K P +
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 479 AL 480
A+
Sbjct: 871 AV 872
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 21/299 (7%)
Query: 188 IRIE----ESTFRVLISALCRIRR-VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
IR+E +S + L ++LC + + A +L+ M + G + + +I + C N+
Sbjct: 556 IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNN 615
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
V A +K+ P + +T MI + A + MK+ +KPDVV Y
Sbjct: 616 VRKAREFFEILVTKKI--VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++L+ E D + E FD +IPDV Y + IN C N + + + M +
Sbjct: 674 SVLLNSD-PELDMKREMEAFD------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKR 726
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
P+VVT LL E + + +EM V+ ++ Y +++D ++GE
Sbjct: 727 REIVPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGE 779
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
A + ++M++ P ++ + +I C C+ G + EA + +++ P + AL+
Sbjct: 780 AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+R ++ LC R++ A ++ M + G D + S II + ++ +A+ V+
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEG--HRKNMNIPKAVDVFN 350
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M K + + +++ + +A + + ++ I D VCY + + G
Sbjct: 351 KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+ ELF EM G+ PDV Y I G C Q K +A ++ M G P++V N
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
L G L G +A +K M +GV+ T+ ++++GL+ E+ +A E + K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALE 460
+S ++ C G ++ A E
Sbjct: 531 SRENDAS----MVKGFCAAGCLDHAFE 553
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLD----GKICSLIISSLCEQNDVTSAEALVVWG 253
I LC + D A +L + + +D G ++ LC + + AE++V+
Sbjct: 258 FIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVL-- 315
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
DM K G P V ++ +I K A+ + N+M + + + V + +L G
Sbjct: 316 DMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMG 375
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
++ + +LF E + D YNV + L K KV+EAI++ M G P+V+
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+G C G S A +M EM G ++ Y ++ GL EA L+ M +
Sbjct: 436 TLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR 495
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
P T + +I + G +++A + + KS
Sbjct: 496 GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 31/288 (10%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ I ++ + V AL ++ +V+ A+++ M G D + +I C Q
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ A L++ +M G P ++ + + L +A L M+ G+KP V +
Sbjct: 448 SDAFDLMI--EMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHN 505
Query: 304 IVLSGIVAEGDYVK----------------------------LDELFDEMLVLGL-IPDV 334
+V+ G++ G+ K LD F+ + L +P
Sbjct: 506 MVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKS 565
Query: 335 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
+ ++ + +++ + +A ++D M KLG +P L+GA C ++ KA+ +
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
+ K + +L TY IM++ E +A L E+M ++ P T+
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 137/292 (46%), Gaps = 8/292 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E T+ L+ A R D A+++ + M G ++ I + I+ L + D+ A + V
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA--MSV 383
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
DM ++R L + +A+ Q+ + + D+VC+ ++ V
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ D++ MLV GL D ++ I+G K+ K++ A++I D MIK+ N+V
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N+++ L + G A+ V+ M +K ++ TY +L+ + + EA +L +M
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 432 KKCFYPRSS--TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
K+ S TF+ +I +C+ G +A E++K +V + P + + L+
Sbjct: 560 KQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLI 611
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
V+ +M LG+ V F +I KE + +AL + +M + G+ P+VV + +++ G
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 311 AEGDYVKLDELFDEMLVLG---LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
GD +L +M ++ + P+ TYN ING CK ++D A +I M+K G
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 427
N T L+ A AG +A + EM KG+ +N Y ++ L + +I A +L
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 428 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
+M K T ++ +C+ G + EA+E ++I K L+ H
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 250 VVWGDMRKLGFCPGVMD-FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 308
V+ G +R C D F ++R + A ++ Q + +G V +
Sbjct: 133 VLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGC 192
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
++ + + +++ EM LG + +V T+N+ I CK++K+ EA+ + M+K G PN
Sbjct: 193 LLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKG---VELNLHTYRIMLDGLVGKAEIGEASL 425
VV+ N ++ C+ GD+ A ++ +MG+ V N TY +++G + A
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ +M+K T+ ++ + G +EAL L ++ +K
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+ L + +D K+ M G+ + +L+I S C+++ + EAL V+ M K
Sbjct: 189 FMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLF--EALSVFYRMLK 246
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYTIVLSGIVAEGD 314
G P V+ F MI K AL +L +M + + P+ V Y V++G G
Sbjct: 247 CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR 306
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + +M+ G+ + TY ++ + DEA+++ D M G N V N+
Sbjct: 307 LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
++ L GD+ A V+++M K ++++ T I++ GL + EA
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L+ R +++ A +IL M+ G LD +I ++ + AL ++ M K
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE--RALEIYDGMIK 494
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
+ ++ + ++ L K A ++N M+ IK D+V Y +L+ + G+ +
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME---IK-DIVTYNTLLNESLKTGNVEE 550
Query: 318 LDELFDEMLVLGLIPDV--YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
D++ +M V T+N+ IN LCK ++A +++ M++ G P+ +T TL
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTY----RIMLDGLVGK 417
+ + + K + + L+GV + H Y R +LD G+
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
QIL + ++ +F LI + +++ A++I + MI+ + I + I++ L
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIK 296
++ +AEA+V +++ ++ + ++ +K +A IL++M KQDG K
Sbjct: 512 SKRGMAGAAEAVVNAMEIKD------IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEK 565
Query: 297 P-DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+V + I+++ + G Y K E+ M+ G++PD TY I K ++ ++
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVE 625
Query: 356 IVDSMIKLGCKPN 368
+ D +I G P+
Sbjct: 626 LHDYLILQGVTPH 638
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++ L R ++ K+L+ M+ DG + + +I S N + EA+ V+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN--EAMNVFN 423
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G P + + +I K A+ + +M+ G+ PD Y+++++ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF EM+ G P++ TYN+ ++ K A+++ M G +P+ VT +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLK 432
++ L G L +A+ V EM K + Y +++D L GKA + +A + ML
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKAGNVEKAWQWYQAMLH 602
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T ++++ + I EA EL++ ++A P + + LL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 86 NAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFF 145
+ Y ++ L I +LD + R + + + LI YG A+ + +A+++F
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
++ C P + T+ LI +
Sbjct: 424 QMQEAGCKP------------------------------------DRVTYCTLIDIHAKA 447
Query: 206 RRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
+D A+ + M G D S+II+ L + + +A L +M G P ++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC--EMVDQGCTPNLV 505
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
+ M+ K +AL + M+ G +PD V Y+IV+ + G + + +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
IPD Y + ++ K V++A Q +M+ G +PNV TCN+LL +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLD 412
++A +++ M G+ +L TY ++L
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 471 AP 472
P
Sbjct: 536 EP 537
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++ L R ++ K+L+ M+ DG + + +I S N + EA+ V+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN--EAMNVFN 423
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G P + + +I K A+ + +M+ G+ PD Y+++++ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF EM+ G P++ TYN+ ++ K A+++ M G +P+ VT +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLK 432
++ L G L +A+ V EM K + Y +++D L GKA + +A + ML
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKAGNVEKAWQWYQAMLH 602
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T ++++ + I EA EL++ ++A P + + LL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 86 NAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFF 145
+ Y ++ L I +LD + R + + + LI YG A+ + +A+++F
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
++ C P + T+ LI +
Sbjct: 424 QMQEAGCKP------------------------------------DRVTYCTLIDIHAKA 447
Query: 206 RRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
+D A+ + M G D S+II+ L + + +A L +M G P ++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC--EMVDQGCTPNLV 505
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
+ M+ K +AL + M+ G +PD V Y+IV+ + G + + +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
IPD Y + ++ K V++A Q +M+ G +PNV TCN+LL +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLD 412
++A +++ M G+ +L TY ++L
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 471 AP 472
P
Sbjct: 536 EP 537
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ ++ L R ++ K+L+ M+ DG + + +I S N + EA+ V+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN--EAMNVFN 423
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M++ G P + + +I K A+ + +M+ G+ PD Y+++++ + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+LF EM+ G P++ TYN+ ++ K A+++ M G +P+ VT +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLK 432
++ L G L +A+ V EM K + Y +++D L GKA + +A + ML
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKAGNVEKAWQWYQAMLH 602
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T ++++ + I EA EL++ ++A P + + LL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 86 NAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFF 145
+ Y ++ L I +LD + R + + + LI YG A+ + +A+++F
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVR-DGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 146 RIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRI 205
++ C P + T+ LI +
Sbjct: 424 QMQEAGCKP------------------------------------DRVTYCTLIDIHAKA 447
Query: 206 RRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVM 265
+D A+ + M G D S+II+ L + + +A L +M G P ++
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC--EMVDQGCTPNLV 505
Query: 266 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
+ M+ K +AL + M+ G +PD V Y+IV+ + G + + +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
IPD Y + ++ K V++A Q +M+ G +PNV TCN+LL +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLD 412
++A +++ M G+ +L TY ++L
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 350
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 471 AP 472
P
Sbjct: 536 EP 537
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
SQ R S+ +LI L R R + +L G+ L G+I + +I E
Sbjct: 75 SQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAK- 133
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVV 300
+ L + M + F P ++ LV RG A + + G+ P+
Sbjct: 134 -LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH-RGYLQKAFELFKSSRLHGVMPNTR 191
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++ D +LF +ML ++PDV +Y + I G C++ +V+ A++++D M
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 420
+ G P+ TL+G LC+ G + K ++EM KG + ++ G ++
Sbjct: 252 LNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 307
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
EA ++E ++K S T++ +I +C +
Sbjct: 308 EEACDVVEVVMKNGETLHSDTWEMVIPLICNE 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A + +M + + PDV Y I++ G +G EL D+ML G +PD I
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
GLC Q DE + ++ MI G P+ N L+ C G + +A V++ + G L
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+ T+ +++ + + E + L LE+ +K+
Sbjct: 325 HSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 197 VLISALCRIR-RVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDM 255
LI+ALC+ + +A ++L + + K S +I SLC +V A+AL++ DM
Sbjct: 341 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLL--DM 398
Query: 256 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
G PG F ++ K +A +L M+ G+KPDV YT+++SG G
Sbjct: 399 ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMM 458
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+ E+ E TY+ I G CK + DEA+++++ M + G +PN N L
Sbjct: 459 DEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL 518
Query: 376 LGALC-EAGDLSKAKGVMKEMGLKGVELN 403
+ + C +A D KA+ + +EM KG+ LN
Sbjct: 519 IQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 7/317 (2%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXX--XXXXXXXXXMVPQIL 180
I LI +G + + A D+F + F TP V + +
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
LKS + E +I+ C+ + + A + L + + +I++LC +
Sbjct: 293 LKSGVLS---EGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALC-K 348
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
ND T A + GD+ G+ F+D+I L + DA +L M G P
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
+ +V+ GD + E+ M GL PDVYTY V I+G K +DEA +I+
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-E 419
K K + VT + L+ C+ + +A ++ EM GV+ N Y ++ KA +
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALD 528
Query: 420 IGEASLLLEEMLKKCFY 436
+A +L EEM +K +
Sbjct: 529 WEKAEVLFEEMKQKGLH 545
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 126/289 (43%), Gaps = 11/289 (3%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+ K++ T+ + + ALC+ +D+A + M++ G +G+ II+ C
Sbjct: 253 VFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFC 312
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQM----KQD 293
++ A ++ ++ P + +I L K + + A +L + ++
Sbjct: 313 KEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEARRR 370
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
GIKP ++ V+ + + L +M+ G P +N+ ++ K +DEA
Sbjct: 371 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+++ M G KP+V T ++ + G + +A+ ++ E K +L+ TY ++ G
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
E EA LL EM + P + ++ +I C K L E E++
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 13/320 (4%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++ +S+ ++ +F L+ LC V A + N + D +++IS
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNIMISGW 265
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
+ +V E V +M + GF P + ++ +I L + R D++ I + +K G P
Sbjct: 266 SKLGEVEEMEK--VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D Y ++ ++ D+ + + ML P++ TY+ ++GL K KV +A++I
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
+ M+ G P + L LC G A + ++ G ++ Y+++L L
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL--- 440
Query: 418 AEIGEASLLL---EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG- 473
+ G+ +LL +EM + + ++ I+ +C G + A+ +M++ + K F P
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNR 500
Query: 474 ---ARAWEALLLHSGSDLTY 490
+R L+ + ++L Y
Sbjct: 501 FVYSRLSSKLMASNKTELAY 520
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 127/305 (41%), Gaps = 3/305 (0%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE 239
+ ++ I + ++ ++IS ++ V+ K+L M+E GFG D S +I L
Sbjct: 243 VFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR 302
Query: 240 QNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV 299
+ +++ ++ +++ G P + MI + +++ +M + +P++
Sbjct: 303 TGRIN--DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNL 360
Query: 300 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 359
Y+ ++SG++ E+F+EML G++P ++ LC A+ I
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
Query: 360 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 419
K GC+ + LL L G V EM G ++ Y ++DGL
Sbjct: 421 SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGH 480
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA-WE 478
+ A L++EE ++K F P + + + A +L KI AR+ W
Sbjct: 481 LENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWR 540
Query: 479 ALLLH 483
+ H
Sbjct: 541 SNGWH 545
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
+++ G+ DV Y+++L + + + ++ M+ G+ PD+ + ++ + +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYR 408
V AI++ + G K + + N LL LCE +S AK V KG + + +Y
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYN 259
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
IM+ G E+ E +L+EM++ F P ++ ++I + + G IN+++E+ I K
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 469 SFAPGARAWEALLLHSGSDLTYSET 493
P A + A++ + S + E+
Sbjct: 320 GNVPDANVYNAMICNFISARDFDES 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 245 SAEALVVWGD--MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
S EA+V + D +R+ G V ++ ++R L + + + +L M +G+ PD+ C
Sbjct: 130 SGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECL 189
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
TI + V + ELF+E G+ ++N + LC+++ V A + ++ K
Sbjct: 190 TIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--K 247
Query: 363 LGCKP-NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
G P + + N ++ + G++ + + V+KEM G + +Y +++GL I
Sbjct: 248 KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIN 307
Query: 422 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ + + + K P ++ ++ +IC +E++ ++++ + P + L+
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 283 ALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGD-----YVKLD---ELFDEMLVLGLIPD 333
A + N+M + D KPD+ YT++LS ++ + YV L L +M G+IPD
Sbjct: 163 AFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPD 222
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 393
+ N+ I K +VDEAI++ M G +PN T + L+ +CE G + + G K
Sbjct: 223 TFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYK 282
Query: 394 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
EM +KG+ N Y +++ L + + EA ++ +ML P T++ ++ +C+ G
Sbjct: 283 EMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Query: 454 LINEALELMKKIVAKSFAPGARAWEALL 481
+EALE++++ + G R + L+
Sbjct: 343 RGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M+ G P +I+ K +A+ + +M G +P+ Y+ ++ G+ +G
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + EM V G++P+ Y V I L + ++DEA+++V M+ P+++T NT
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
+L LC G S+A +++E + + YR ++D
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 218 MIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKE 277
M +G D + ++II + + +V EA+ V+ +M G P ++ +++ + ++
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVD--EAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 278 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 337
R L +M+ G+ P+ CY +++ + E + E+ +ML L PD+ TY
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIK 362
N + LC+ + EA+++V+ K
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKK 356
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ + L R V +++ M G+ +D + + I S Q AE + ++
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMD--LDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEER-GMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVA 311
M F P + D + ++R+L +D ++ + + + G Y + + +
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G + + +E+ M G PD TY+ + GLCK +++EA ++D M GC P++ T
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
L+ C+ +L KA M KG +++ + +++DG V + AS+ L EM+
Sbjct: 443 WTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMV 502
Query: 432 KKC-FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 486
K P ST+ +I + + EAL+L++ + +++ A A++ L G+
Sbjct: 503 KNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGT 558
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 129/291 (44%), Gaps = 12/291 (4%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+L K + + + S +R I L +R+ A ++ ++ F +D I +I S+
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVS 339
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD 298
+ ++ E LV M G P + + + + L + ++ + + G +
Sbjct: 340 AVDPDSAVEFLVY---MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396
Query: 299 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+ Y++++S + G + EM GL PDV YN I CK + A ++ D
Sbjct: 397 LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWD 456
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
M GCK N+ T N L+ L E G+ ++ + +M +G+E + Y +++GL +
Sbjct: 457 EMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKET 516
Query: 419 EIGEASLLLEEMLKKCFYPRSST-----FDNIICCMCQKGLINEALELMKK 464
+I EA++ E+ +KC T + +C G EA +L+++
Sbjct: 517 KI-EAAM---EVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 155/361 (42%), Gaps = 72/361 (19%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLII-SS 236
++ +K +H + + F V I CR + +++++ + + ++G I +L+I S
Sbjct: 173 KLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHS 232
Query: 237 LCE-------------------QNDVTS----AEALVVWGDM----------RKLGFCPG 263
LC+ + D + AEA VV G++ RKLG P
Sbjct: 233 LCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPR 292
Query: 264 VMDFTDMIRFLVKEERGMDALYILN-------QMKQD----------GIKPDVVCYTIVL 306
D+ I L+ +R +A + M D + PD +V
Sbjct: 293 SSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVY 352
Query: 307 SGIVAEGD----------------YVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQ 347
+V+ G + K D L +L G ++ +Y++ I+ LCK
Sbjct: 353 --MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKA 410
Query: 348 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 407
+V E+ + M K G P+V N L+ A C+A + AK + EM ++G ++NL TY
Sbjct: 411 GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTY 470
Query: 408 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+++ L + E E+ L ++ML++ P + + ++I +C++ I A+E+ +K +
Sbjct: 471 NVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCME 530
Query: 468 K 468
+
Sbjct: 531 R 531
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 125/359 (34%), Gaps = 76/359 (21%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
KI ++ S +R LI L R+ A +L G + +C+ +++ L A
Sbjct: 112 KILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYA 171
Query: 247 EALVVWGDMRKLGFCPGVMDF------------TDMIRFLVKE----------------- 277
+ L V MR G + F T+ + LV E
Sbjct: 172 QKLFV--KMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLI 229
Query: 278 -------ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 330
R MDA YIL +++ KPD + Y ++ V G+ + + + LG+
Sbjct: 230 LHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGV 289
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDS------------------------------- 359
P Y +I L ++ EA ++ +
Sbjct: 290 APRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEF 349
Query: 360 ---MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
M+ G P + T + L LC + + KG L +Y +M+ L
Sbjct: 350 LVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCK 409
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ E+ L+EM K+ P S ++ +I C+ +I A KK+ + F G +
Sbjct: 410 AGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA----KKLWDEMFVEGCK 464
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+AL++L + + + D V Y +V+ +GD D L EM +GL PDV TY I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM----GL 397
NG C K+D+A ++ M K C N VT + +L +C++GD+ +A ++ EM G
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 398 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI-- 455
+ N TY +++ K + EA L+L+ M + P + + C+ +G++
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP-----NRVTACVLIQGVLEN 322
Query: 456 NEALELMKKIVAKSFAPGA 474
+E ++ + K++ K G
Sbjct: 323 DEDVKALSKLIDKLVKLGG 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 121/258 (46%), Gaps = 5/258 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I+ C ++D A ++ M + L+ S I+ +C+ D+ A L+
Sbjct: 202 TYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Query: 254 DMRKLG--FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ G P + +T +I+ ++ R +AL +L++M G P+ V +++ G++
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
Query: 312 EGDYVK-LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+ VK L +L D+++ LG + ++ L + + +EA +I M+ G +P+ +
Sbjct: 322 NDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGL 381
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT--YRIMLDGLVGKAEIGEASLLLE 428
C+ + LC + +E+ K V+ + + + ++L GL + EA+ L +
Sbjct: 382 ACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAK 441
Query: 429 EMLKKCFYPRSSTFDNII 446
ML K + S + II
Sbjct: 442 SMLDKKMRLKVSHVEKII 459
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 6/249 (2%)
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
I+ +LC Q ++ EAL V + C + + +IR + A ++ +M
Sbjct: 135 IVLTLCNQANLAD-EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDC 193
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
G+ PDV+ YT +++G G L EM + + TY+ + G+CK ++
Sbjct: 194 VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMER 253
Query: 353 AIQIVDSMIKLG----CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
A++++ M K PN VT ++ A CE + +A V+ MG +G N T
Sbjct: 254 ALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTAC 313
Query: 409 IMLDGLVGKAEIGEA-SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+++ G++ E +A S L+++++K S F + + + EA ++ + ++
Sbjct: 314 VLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLV 373
Query: 468 KSFAPGARA 476
+ P A
Sbjct: 374 RGVRPDGLA 382
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 325 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
ML + P TYN I+G CKQ++VD+A +++DSM GC P+VVT +TL+ C+A
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ + EM +G+ N TY ++ G ++ A LL EM+ P TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 445 IICCMCQKGLINEALELMKKI 465
++ +C K + +A +++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%)
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
I P + Y ++ G + + D M G PDV T++ ING CK +VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
+I M + G N VT TL+ C+ GDL A+ ++ EM GV + T+ ML GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 415 VGKAEIGEASLLLEEMLK 432
K E+ +A +LE++ K
Sbjct: 126 CSKKELRKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
+I C+Q+ V A+ ++ M G P V+ F+ +I K +R + + I +M +
Sbjct: 16 MIDGFCKQDRVDDAKRML--DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
GI + V YT ++ G GD +L +EM+ G+ PD T++ + GLC + ++ +
Sbjct: 74 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 133
Query: 353 AIQIVDSMIK 362
A I++ + K
Sbjct: 134 AFAILEDLQK 143
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
+ + ++K+ +I +E+ +LIS C ++D A ++ M GF + K ++++
Sbjct: 229 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 288
Query: 236 ---SLCEQNDVTSAEALV--VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM 290
LC + D + V V +M G F +I L K R +A+ + +M
Sbjct: 289 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 348
Query: 291 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL--IPDVYTYNVYINGLCKQN 348
+ G +PD Y +++ + + DE+ D+M G + + Y ++ LC
Sbjct: 349 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 408
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+++ A+ + SM GCKP + T + L+G +C L++A G+ KE KG+ ++ YR
Sbjct: 409 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 468
Query: 409 I 409
+
Sbjct: 469 V 469
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 129/295 (43%), Gaps = 16/295 (5%)
Query: 196 RVLISALCRIRRVDYAVKILNCM--IEDGFGL--DGKICSLIISSLCEQNDVTSAEALVV 251
+ L SA+ R+ R ++ + +E+ +GL D + +L++ LCE+ + AE +V
Sbjct: 176 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 235
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS---G 308
++ + D +I E+ +A + +M + G + Y ++L
Sbjct: 236 -NTANEIFPDENICDL--LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK 292
Query: 309 IVAEGDYVKL----DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
+ + D KL +++ EM G+ + T+NV IN LCK + +EA+ + M + G
Sbjct: 293 LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWG 352
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE--LNLHTYRIMLDGLVGKAEIGE 422
C+P+ T L+ +L +A + + ++ +M G LN Y L L G +
Sbjct: 353 CQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEH 412
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
A + + M P T+D ++ MC + A L K+ K A + +
Sbjct: 413 AMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
++ ++ + +++ LC A K++ + F D IC L+IS C + E
Sbjct: 207 LKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFP-DENICDLLISGWCIAEKLD--E 263
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALY-------ILNQMKQDGIKPDVV 300
A + G+M + GF G + M+ + K R D +L +M+ G+ +
Sbjct: 264 ATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTE 323
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
+ ++++ + + LF M G PD TY V I L + ++ E +++D M
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKM 383
Query: 361 IKLGCKP--NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
G N L LC L A V K M G + + TY +++ +
Sbjct: 384 KSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANN 443
Query: 419 EIGEASLLLEEMLKK 433
++ A+ L +E KK
Sbjct: 444 QLTRANGLYKEAAKK 458
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 12/234 (5%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ DM K GF ++ + GM +A + +M K V+ + +LS
Sbjct: 103 YRDMSKEGFAARIISLYG--------KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 310 VAEGDYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ ++ELF+E+ L + PD+ +YN I LC+++ + EA+ ++D + G KP+
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+VT NTLL + G + + +M K V +++ TY L GL +A+ E L
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
E+ P +F+ +I +G ++EA K+IV + P +A ALLL
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD-KATFALLL 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 39/211 (18%)
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-TIVLS-------- 307
KL P ++ + +I+ L +++ +A+ +L++++ G+KPD+V + T++LS
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 308 --------------------------GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
G+ E +L LF E+ GL PDV+++N I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
G + K+DEA ++K G +P+ T LL A+C+AGD A + KE K
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+ T + ++D LV ++ EA EE++K
Sbjct: 353 VGQTTLQQLVDELVKGSKREEA----EEIVK 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%)
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
IKPD+V Y ++ + + + L DE+ GL PD+ T+N + + + +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+I M++ ++ T N L L + + E+ G++ ++ ++ M+ G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
+ + ++ EA +E++K + P +TF ++ MC+ G A+EL K+ +K + G
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 474 ARAWEALL 481
+ L+
Sbjct: 355 QTTLQQLV 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 115/303 (37%), Gaps = 34/303 (11%)
Query: 88 YYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRI 147
Y ++ LV L + +L+ ++ + E +I YG A ++A +F +
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYRDM-SKEGFAARIISLYGKAGMFENAQKVFEEM 135
Query: 148 PRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRR 207
P C +V + + I+ + ++ LI ALC
Sbjct: 136 PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDS 195
Query: 208 VDYAVKILNCMIEDGFGLD-GKICSLIISS-------LCEQ------------------- 240
+ AV +L+ + G D +L++SS L E+
Sbjct: 196 LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNA 255
Query: 241 ------NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
N+ S E + ++G+++ G P V F MIR + E + +A ++ + G
Sbjct: 256 RLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
+PD + ++L + GD+ ELF E + T ++ L K +K +EA
Sbjct: 316 YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAE 375
Query: 355 QIV 357
+IV
Sbjct: 376 EIV 378
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIE------DGFGLDGKICSLIISSLCEQND 242
R +E T +I+ LC++ RVD A+K+L+ M+ D L+ +C L+ E
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAE--- 500
Query: 243 VTSAEALVVWGD-MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
EAL V M + PGV+ + +IR L K +G +A+ + Q+++ + D
Sbjct: 501 ----EALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y I++ G+ + +D+++ D + Y ++ GLC+ + +A + +
Sbjct: 557 YAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLA 616
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
G PNVV NT++ +G +A +++EM G + T+RI+
Sbjct: 617 DSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 139/339 (41%), Gaps = 45/339 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV--V 251
TF LI C IR ++ A K+ + M G + S++I + DV + L+ +
Sbjct: 199 TFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
Query: 252 WGDMRK---------------------------------LGFCPGV---MDFTDMIRFLV 275
W M+ + C V + MI L
Sbjct: 259 WEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLC 318
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
+ R A I+ MK G+KP Y ++ G+ +G ++ +L +E P Y
Sbjct: 319 RYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY 378
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
TY + + LCK+ +A +++ M++ N L LC + ++ V+ M
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNIICCMCQKGL 454
+ +T +++GL + +A +L++M+ F P + T + ++C + +G
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 455 INEALELMKKIVAKS-FAPGARAWEALL-----LHSGSD 487
EAL+++ +++ ++ PG A+ A++ LH G +
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE 537
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 5/315 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
Q+L + + E T+++L+ +LC+ A +L M+ +I ++ + L
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGL 422
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-K 296
C ++ T E L V M + P +I L K R DA+ +L+ M
Sbjct: 423 CVMDNPT--EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA 480
Query: 297 PDVVCYTIVLSGIVAEGDYVK-LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
PD V V+ G++A+G + LD L M + P V YN I GL K +K DEA+
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ + K + T ++ LC + AK ++ + Y L GL
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
+ +A L ++ P ++ +I + GL EA ++++++ AP A
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 476 AWEAL-LLHSGSDLT 489
W L LH DLT
Sbjct: 661 TWRILDKLHDSMDLT 675
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 19/296 (6%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
+I +LC R D A + + GF D + C++II+ L S ++ K
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFK 155
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
F P + ++ ++ L R +DA ++ M+ G PDVV +T ++ G +
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-----------DSMIKLGCK 366
++FDEM V G+ P+ T +V I G K V+ +++ D+ +K
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASL 425
N+V ++C G + + + M L + V + Y M+D L A+
Sbjct: 276 ANLVD------SMCREGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLCRYRRNHGAAR 328
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ M K PR ++++ II +C+ G A +L+++ F P ++ L+
Sbjct: 329 IVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 191 EESTFRVLISALCRIRR-VDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
+ + +R I ++C +RR D A++IL+ + G+ D S +I SLC+ A
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ GF P +I L+ + L +++++ G K +
Sbjct: 113 FLL--FLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLI--GFKKE----------- 157
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+P + YN +N LC +V +A ++V M G P+V
Sbjct: 158 --------------------FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDV 197
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
VT TL+G CE +L A V EM + G+ N T +++ G + ++ L++E
Sbjct: 198 VTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE 257
Query: 430 MLKKCFYP-----RSSTFDNIICCMCQKGLINEALELMKKI 465
+ + +++ F N++ MC++G N+ E+ + +
Sbjct: 258 LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 15/267 (5%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+ + L++ LC I RV A K++ M G D + +I CE ++ A V+
Sbjct: 163 TNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHK--VF 220
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-----KQDGIKPDVVCYTIVLS 307
+MR G P + + +I +K ++ ++ + + ++
Sbjct: 221 DEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVD 280
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
+ EG + + E+ + M + + + Y I+ LC+ + A +IV M G KP
Sbjct: 281 SMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKP 340
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL----HTYRIMLDGLVGKAEIGEA 423
+ N ++ LC+ G +A +++E G E +TY+++++ L + + G+A
Sbjct: 341 RRTSYNAIIHGLCKDGGCMRAYQLLEE----GSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMC 450
+LE ML+K R+ ++ + +C
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLC 423
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
+I LC + T A AL+ ++ G P + F ++ + + + I +M +
Sbjct: 183 LIKGLCGKGSFTEAVALI--DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVE 240
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
+K D+ Y L G+ E ++ LFD++ L PDV+T+ I G + K+DE
Sbjct: 241 KNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDE 300
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
AI + K GC+P N+LL A+C+AGDL A + KE+ K + ++ + ++D
Sbjct: 301 AITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVD 360
Query: 413 GLVGKAEIGEASLLLE 428
LV ++ EA ++E
Sbjct: 361 ALVKGSKQDEAEEIVE 376
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
I+PDV Y ++ G+ +G + + L DE+ GL PD T+N+ ++ + K +E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIML 411
QI M++ K ++ + N L L + + + LKG EL ++ T+ M+
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDK--LKGNELKPDVFTFTAMI 289
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
G V + ++ EA +E+ K P F++++ +C+ G + A EL K+I AK
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 11/233 (4%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ +M K GF +++ + GM +A + ++M + K + + +L+
Sbjct: 100 YPNMSKEGFVARIINLYGRV--------GMFENAQKVFDEMPERNCKRTALSFNALLNAC 151
Query: 310 VAEGDYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
V + ++ +F E+ L + PDV +YN I GLC + EA+ ++D + G KP+
Sbjct: 152 VNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD 211
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
+T N LL G + + + M K V+ ++ +Y L GL + + E L +
Sbjct: 212 HITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFD 271
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ P TF +I +G ++EA+ K+I P + +LL
Sbjct: 272 KLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 274 LVKEERGMDALYILNQMKQ----DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE----- 324
LV +ER D +I + K+ + + ++ Y + + A + ++E+ +E
Sbjct: 44 LVNDER--DPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYP 101
Query: 325 -MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
M G + + IN + + A ++ D M + CK ++ N LL A +
Sbjct: 102 NMSKEGFVARI------INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSK 155
Query: 384 DLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
+G+ KE+ G +E ++ +Y ++ GL GK EA L++E+ K P TF
Sbjct: 156 KFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITF 215
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
+ ++ KG E ++ ++V K+ R++ A LL
Sbjct: 216 NILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLL 255
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM- 325
++ +IR + A+ QM Q G V + +L+ + ++ K+ +LFDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 326 -LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 384
+IPD +Y + I C ++AI+I+ M G + + T+L +L + G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 385 LSKAKGVMKEMGLKGVELNLHTY--RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
L A + EM KG EL+ Y RIM + E L+EEM P + ++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISY 281
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
+ ++ C++G+++EA ++ + + + AP A + L+ H
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFH 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 145/363 (39%), Gaps = 45/363 (12%)
Query: 79 YSCDPTPNAYY--FLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADR 136
+S P + Y ++ L DI +++ + K + F + LIR YG A
Sbjct: 59 HSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPF-YSTLIRSYGQASM 117
Query: 137 IQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL--LKSQHMKIRIEEST 194
A+ F ++ ++ TP VPQ+ + ++ KI ++ +
Sbjct: 118 FNHAMRTFEQMDQY-GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKIS 176
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +LI + C + A++I+ M G + + I+SSL ++ ++ A+ L W
Sbjct: 177 YGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL--W-- 232
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
N+M + G + D Y + + E
Sbjct: 233 ---------------------------------NEMVKKGCELDNAAYNVRIMSAQKESP 259
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
++ EL +EM +GL PD +YN + C++ +DEA ++ + + C PN T T
Sbjct: 260 -ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRT 318
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ LC + + + K+ + +T + ++ GLV + +A L+ +KK
Sbjct: 319 LIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI-RTVKKK 377
Query: 435 FYP 437
F P
Sbjct: 378 FPP 380
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 3/302 (0%)
Query: 92 IKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQDAVDLFFRIPRFR 151
+ L L I +L+H + + + FI V +I YG A + A+D FF + +
Sbjct: 78 VSRLAGAGRLDFIEDLLEHQKTLPQGRREGFI-VRIIMLYGKAGMTKQALDTFFNMDLYG 136
Query: 152 CTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYA 211
C +V + + I I+ +F + I + C + +D A
Sbjct: 137 CKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGA 196
Query: 212 VKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMI 271
+ M + G D + +IS+L + L W M G P + F I
Sbjct: 197 YMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL--WNLMVLKGCKPNLTTFNVRI 254
Query: 272 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 331
+FLV R DA +L M + ++PD + Y +V+ G + ++ M G
Sbjct: 255 QFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
P++ Y I+ LCK D A + ++ PN+ T LL L + G L +AK +
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 392 MK 393
M+
Sbjct: 375 ME 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)
Query: 222 GFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
G +D ++ I S CE + A + +M K G P V+ +T +I L K ER +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGA--YMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+ N M G KP++ + + + +V ++L M L + PD TYN+ I
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
G D A ++ +M G KPN+ T++ LC+AG+ A + K+ K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLE 428
NL T ++L GLV K ++ +A ++E
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 3/205 (1%)
Query: 281 MDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 339
+D Y+ + +M++ G+ PDVV YT ++S + V + L++ M++ G P++ T+NV
Sbjct: 193 LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNV 252
Query: 340 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I L + + +A ++ M KL +P+ +T N ++ A A+ V M KG
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+ NL Y+ M+ L A + ++ ++K +YP T + ++ + +KG +++A
Sbjct: 313 YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Query: 460 ELMKKIVAKSFAPGARAWEALLLHS 484
+M+ + + P R+ + L L S
Sbjct: 373 SIMELVHRR--VPPFRSKQLLSLKS 395
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 329 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
G+ D ++N+ I C+ +D A + M K G P+VVT TL+ AL +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
G+ M LKG + NL T+ + + LV + +A+ LL M K P S T++ +I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 449 MCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGS-DLTYS 491
+ A + + K + P + ++ + L +G+ DL Y+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYT 338
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 14/312 (4%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG---FGLDGKICSLII 234
Q LLK + + + ST+ LI + + + ++L+ M+E+G G + + ++++
Sbjct: 136 QALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 235 SSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQ 292
+ C++ V EA V M + G P + + + V+ E ++ + + +
Sbjct: 196 QAWCKKKKV--EEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Query: 293 DGIKPDVVCYTIVLSGIVAEG---DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
+ KP+ IV+ G EG D ++ EM V ++ +N ING +
Sbjct: 254 EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA---NLVVFNSLINGFVEVMD 310
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
D +++ M + K +V+T +T++ A AG + KA V KEM GV+ + H Y I
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 410 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
+ G V E +A LLE ++ + P F +I C G +++A+ + K+
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Query: 470 FAPGARAWEALL 481
+P + +E L+
Sbjct: 430 VSPNIKTFETLM 441
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 320
C V T ++ L++ R +A + + + G +P ++ YT +L+ + + Y +
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
+ E+ G D +N IN + +++A+Q + M +LG P T NTL+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 381 EAGDLSKAK---GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
AG ++ +M E G V N+ T+ +++ K ++ EA ++++M + P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 438 RSSTFDNIICCMCQKG-LINEALELMKKIVAKSFA-PGAR 475
+ T++ I C QKG + E+++K+V K A P R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EA V+ + + G P ++ +T ++ + +++ I+++++Q G K D + + V+
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-- 364
+ G+ + +M LGL P TYN I G K + + +++D M++ G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 365 -CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
PN+ T N L+ A C+ + +A V+K+M GV + TY + V K E A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 424 -SLLLEEM-LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
S ++E+M +K+ P T ++ C++G + + L ++++
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/423 (17%), Positives = 156/423 (36%), Gaps = 80/423 (18%)
Query: 66 PFLLSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFV 125
P T+ + P+ +Y L+ + I ++ +E+ + F
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ-SGTKLDSIFFN 119
Query: 126 YLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXX--XXXXXXXXXMVPQILLKS 183
+I + + ++DAV ++ PT + ++L+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLD----------------- 226
++ + TF VL+ A C+ ++V+ A +++ M E G D
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
Query: 227 --------------------GKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMD 266
G+ C +++ C + V + L M+++ ++
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR--DGLRFVRRMKEMRVEANLVV 297
Query: 267 FTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 324
F +I V+ + G+D + L MK+ +K DV+ Y+ V++ + G K ++F E
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTL--MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 325 MLVLGLIPDVYTYNV----------------------------------YINGLCKQNKV 350
M+ G+ PD + Y++ I+G C +
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSM 415
Query: 351 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
D+A+++ + M K G PN+ T TL+ E KA+ V++ M GV+ T+ ++
Sbjct: 416 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Query: 411 LDG 413
+
Sbjct: 476 AEA 478
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 7/287 (2%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
++S L + ++D +K+ + M DG D + +++ C + +A+ + G++
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKNGYPKAIELIGELPH 230
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G + + ++ R +A + QMK +G P++ Y+ +L+ +GDY K
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
DEL EM +GL+P+ + K D + +++ + G N + L+
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL---LEEMLKKC 434
L +AG L +A+ + +M KGV + + IM+ L EA L E +KC
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKC 410
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ ++C C+ G + + +MKK+ ++ +P + L+
Sbjct: 411 DL---VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 3/230 (1%)
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+++L V D ++R R D + + M+Q G K V Y+ + V
Sbjct: 87 SSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGA 144
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ K E++ + +VY N ++ L K K+D I++ D M + G KP+VVT
Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTY 204
Query: 373 NTLL-GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
NTLL G + KA ++ E+ G++++ Y +L EA +++M
Sbjct: 205 NTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMK 264
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ P + +++ KG +A ELM ++ + P LL
Sbjct: 265 VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ T ++ +++E R +++ +L ++ + D + Y+IV+ EGD V ++
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
FDEML G + + Y V++ C++ V EA +++ M + G P T N L+G
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
G K + M +G+ + + M+ + + A+ +L + + K F P T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 442 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
+ ++I + I++AL+L ++ + +PG + +L++
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 11/300 (3%)
Query: 136 RIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMK-IRIEEST 194
R+++ VDL RI RC P+V + LLK MK + ++
Sbjct: 249 RLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS--LLKRLLMKNMVVDTIG 306
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ +++ A + + A K+ + M++ GF + + ++ + CE+ DV AE L+ +
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL--SE 364
Query: 255 MRKLGFCPGVMDFTDMIRFLVK---EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
M + G P F +I + EE+G++ + M G+ P + ++ +
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV---MVTRGLMPSCSAFNEMVKSVSK 421
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
+ + +E+ + + G +PD +TY+ I G + N +D+A+++ M P
Sbjct: 422 IENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEV 481
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
+L+ LC G + + +K M + +E N Y ++ + A + EM+
Sbjct: 482 FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 1/291 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ L +L ++ + KIL M + + G+ II + V A L G
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN-GV 172
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+ LG V + ++ L + A ++ +M + G+KPD Y I+++G + G
Sbjct: 173 PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK 232
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ E DEM G P ++ I GL ++ A ++V M K G P++ T N
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ A+ ++G++ + G+ +++ TY+ ++ + +I EA LL ++
Sbjct: 293 LIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 485
P S + II MC+ G+ ++A + K+ P + L+ G
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCG 403
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 147/378 (38%), Gaps = 45/378 (11%)
Query: 80 SCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYGLADRIQD 139
S PT Y L K+L + + + +L ++ + + ++I YG +
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLS-LDISGETLCFIIEQYGKNGHVDQ 164
Query: 140 AVDLFFRIPR-FRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVL 198
AV+LF +P+ C TV + L
Sbjct: 165 AVELFNGVPKTLGCQQTV------------------------------------DVYNSL 188
Query: 199 ISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKL 258
+ ALC ++ A ++ MI G D + +++++ C + A+ + +M +
Sbjct: 189 LHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFL--DEMSRR 246
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
GF P +I L+ A ++++M + G PD+ + I++ I G+
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
E++ LGL D+ TY I + K K+DEA +++++ ++ G KP ++
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
+C G A +M +K N Y +++ + +A+ L EM + P
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426
Query: 439 SSTFDNIICCMCQKGLIN 456
S FD M GL N
Sbjct: 427 SRCFD-----MVTDGLKN 439
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 282 DALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 340
D+L N + + P + Y + + + Y + ++ +M L L T
Sbjct: 93 DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFI 152
Query: 341 INGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
I K VD+A+++ + + K LGC+ V N+LL ALC+ A +++ M KG
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKG 212
Query: 400 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
++ + TY I+++G ++ EA L+EM ++ F P + D +I + G + A
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 460 ELMKKIVAKSFAPGARAWEALL 481
E++ K+ F P + + L+
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILI 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG--IKPDVVCYTIVLSGIVAEGDYVK 317
+ P M++ ++ + L ++ IL QMK I + +C+ I G G +
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYG--KNGHVDQ 164
Query: 318 LDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
ELF+ + LG V YN ++ LC A ++ MI+ G KP+ T L+
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 436
C AG + +A+ + EM +G ++++GL+ + A ++ +M K F
Sbjct: 225 NGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
Query: 437 PRSSTFDNIICCMCQKGLINEALEL 461
P TF+ +I + + G + +E+
Sbjct: 285 PDIQTFNILIEAISKSGEVEFCIEM 309
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 155/413 (37%), Gaps = 71/413 (17%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
I+ +IR + + + A LFF + ++ C P + ++
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM-NLMDD 203
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISS------ 236
I ST+ LI+A A+++ M ++G G D ++++S+
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 237 ---------------------------LCEQNDVTSAEALVVWGDMR-KLGFC-PGVMDF 267
C S++AL ++ MR K C P V+ F
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 268 TDMIR-FLVKEE--------------------------------RGMD--ALYILNQMKQ 292
T ++ + VK E GM AL +L +KQ
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
+GI PDVV YT +L+ K E+F M P+V TYN I+ + E
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
A++I M + G KPNVV+ TLL A + V+ +G+ LN Y +
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 413 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ AE+ +A L + M KK S TF +I C+ EA+ +K++
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 139/330 (42%), Gaps = 35/330 (10%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG----------------FGLDGKI- 229
K+R + +TF ++I L ++ + A+ + N M E + + G+I
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 230 -CSLIISSLCEQ----NDVT-------------SAEALVVWGDMRKLGFCPGVMDFTDMI 271
C + ++ + N V+ S AL V GD+++ G P V+ +T ++
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 272 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 331
+ + A + M+++ KP+VV Y ++ + G + E+F +M G+
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
P+V + + + K ++ + G N N+ +G+ A +L KA +
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+ M K V+ + T+ I++ G ++ EA L+EM + +++C +
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 452 KGLINEALELMKKIVAKSFAPGARAWEALL 481
+G + EA + ++ P A+ ++L
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 37/262 (14%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A+ + DM + P + ++I +AL + +M +G+ PD+V + IVLS
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------- 360
+ Y K F+ M + PD T+N+ I L K + +A+ + +SM
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 361 ------------------------------IKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
+ G KPN+V+ N L+GA G A
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
V+ ++ G+ ++ +Y +L+ + G+A + M K+ P T++ +I
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 451 QKGLINEALELMKKIVAKSFAP 472
G + EA+E+ +++ P
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKP 458
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
K++ + TF +LIS CR+ + A+ L M + L ++ S ++ + +Q VT A
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
E+ ++ M+ G P V+ +T M+ E+ A + +M+ +GI+PD + + ++
Sbjct: 585 ES--IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE---AIQIVDSMIKL 363
G + L D ++ IP +T V+ N + E AI ++ M
Sbjct: 643 RAFNKGGQPSNVFVLMD-LMREKEIP--FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 699
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
++ N +L ++G + + ++ GV +NL TY I+L+ L+ +
Sbjct: 700 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 759
Query: 424 SLLLEEMLKKCFYPRSSTFDNII 446
+LE M P + + +II
Sbjct: 760 IEVLEWMSGAGIQPSNQMYRDII 782
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
W ++K +C + MIR + A + +M++ KPD Y +++
Sbjct: 132 WMKIQK-NYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGR 190
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G + L D+ML + P TYN IN EA+++ M G P++VT
Sbjct: 191 AGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT 250
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N +L A SKA + M V + T+ I++ L + +A L M
Sbjct: 251 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 310
Query: 432 KK---CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+K C P TF +I+ KG I + + +VA+ P ++ AL+
Sbjct: 311 EKRAEC-RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 5/202 (2%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
AEA+ ++ M + G P V+ ++ + ++ ++ +L+ + GI + Y
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+ + + K L+ M + D T+ + I+G C+ +K EAI + M L
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
+++L A + G +++A+ + +M + G E ++ Y ML + G+A
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621
Query: 426 LLEEMLKKCFYPRSSTFDNIIC 447
L EM P D+I C
Sbjct: 622 LFLEMEANGIEP-----DSIAC 638
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 104/263 (39%), Gaps = 3/263 (1%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKS 183
+ L+ YG + + A ++F + + R P V V +I +
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV-EIFRQM 451
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ I+ + L++A R ++ +L+ G L+ + I S ++
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A AL + MRK + FT +I + + +A+ L +M+ I Y+
Sbjct: 512 EKAIAL--YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS 569
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
VL +G + + +F++M + G PDV Y ++ K +A ++ M
Sbjct: 570 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Query: 364 GCKPNVVTCNTLLGALCEAGDLS 386
G +P+ + C+ L+ A + G S
Sbjct: 630 GIEPDSIACSALMRAFNKGGQPS 652
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+MR P + +T ++ +E A I Q+++DG++PDV Y ++ G
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
E+F M +G PD +YN+ ++ + +A + + M +LG P + +
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLK 432
LL A +A D++K + ++KEM GVE + ML+ L G+ + + +L EM
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTKMEKILAEMEN 489
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
ST++ +I + G + EL ++ K+F P W +
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 167/418 (39%), Gaps = 47/418 (11%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY--GLADR---I 137
PT + Y LIK ++ VL +E +P+ I V + Y GL R
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVL--VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT 267
Query: 138 QDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRV 197
++A+D+F R+ R RC PT M ++ + + + + T+
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTA 326
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L++A R + A +I + EDG D + + ++ S +
Sbjct: 327 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS------------------R 368
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G+ G + I + M+ G +PD Y I++ G +
Sbjct: 369 AGYPYGAAE-------------------IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+ +F+EM LG+ P + ++ + ++ K V + IV M + G +P+ N++L
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEMLKKCFY 436
G +K + ++ EM ++ TY I+++ + GKA E L E+ +K F
Sbjct: 470 LYGRLGQFTKMEKILAEMENGPCTADISTYNILIN-IYGKAGFLERIEELFVELKEKNFR 528
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 494
P T+ + I +K L + LE+ ++++ AP + LL S+ + T
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVT 586
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 11/292 (3%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFG---LDGKICSLIISS 236
LL+S+++ E T+ +LI A C ++ A +L M + + + I
Sbjct: 203 LLESRYVPT---EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 259
Query: 237 LCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
L ++ T EA+ V+ M++ P + MI K + + + +M+ K
Sbjct: 260 LMKRKGNTE-EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 318
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
P++ YT +++ EG K +E+F+++ GL PDVY YN + + A +I
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
M +GC+P+ + N ++ A AG S A+ V +EM G+ + ++ ++L
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
++ + +++EM + P + ++++ + G + M+KI+A+
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK----MEKILAE 486
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 3/232 (1%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
QHM + +++ +++ A R A + M G K L++S+ + DV
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
T EA+V +M + G P M+ + + IL +M+ D+ Y
Sbjct: 443 TKCEAIV--KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
I+++ G +++ELF E+ PDV T+ I ++ + +++ + MI
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
GC P+ T LL A + + V++ M KGV ++ ++M L
Sbjct: 561 GCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVTVSSLVPKLMAKSLT 611
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 6/197 (3%)
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
+++ +PDV+C+ +++ + Y + + L+ ++L +P TY + I C
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNT----LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
++ A ++ M P + + G + G+ +A V + M +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 406 TYRIMLDGLVGKAEIGEASLLLE-EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
TY +M++ L GKA S L EM P T+ ++ ++GL +A E+ ++
Sbjct: 288 TYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 465 IVAKSFAPGARAWEALL 481
+ P + AL+
Sbjct: 347 LQEDGLEPDVYVYNALM 363
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F +L+ LCR R+ A++I++ M D + +IIS QNDV+ +AL +
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVS--KALEQFEV 423
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
++K G P V +T++++ L K ++ + N+M ++GI+PD V T V++G + +
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
+ ++F M G+ P +Y++++ LC+ ++ DE I+I + M
Sbjct: 484 VAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 193 STFRVLISALC--RIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
STF+ LI+ LC + R V+ A + MI GF D ++ + LCE + A++ +
Sbjct: 749 STFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCL 808
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ K+GF P + ++ IR L + + +AL L + + D Y ++ G++
Sbjct: 809 --DSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLL 865
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
GD K + + M +G P V+ Y I K+ ++++ ++ M C+P+VV
Sbjct: 866 QRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV 925
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T ++ G + +A + M +G + TY ++ L + +A LL EM
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 431 LKKCFYPRSSTFDNIICCMCQKG---LINEALELMKKIVAK 468
L K P + F + + ++G L AL+ +VA+
Sbjct: 986 LDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVAQ 1026
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 7/286 (2%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
I + T+ ++I R + A++ M + G +I+ LCE+ EA
Sbjct: 711 ITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
+ +M + GF P D + L + DA L+ + + G P V Y+I + +
Sbjct: 771 RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRAL 829
Query: 310 VAEGDYVKLDELFDEMLVLG---LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G KL+E E+ + D YTY ++GL ++ + +A+ V+SM ++G K
Sbjct: 830 CRIG---KLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P V +L+ + L K ++M + E ++ TY M+ G + ++ EA
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
M ++ P T+ I C+CQ +AL+L+ +++ K AP
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 283 ALYILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVY 340
A+ N +KQ DG V Y +LS I E + + DEL EM G D+ T+ +
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLS-IAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
I+ K K+ + + + + M K G + + N ++ +LC AG A KEM KG+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
L TY+++LD + ++ + ++M++ C F ++ C G I EALE
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 461 LMKKIVAKSFAPGARAWEALL 481
L++++ K A+ +E L+
Sbjct: 351 LIRELKNKEMCLDAKYFEILV 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIE-------DGFGLDGKICSLIISSLCEQNDVTSA 246
T+++L+ + + +VD I + M+ D FG ++ S C +
Sbjct: 296 TYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY-------LLKSFCVSGKI--K 346
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
EAL + +++ C F +++ L + R +DAL I++ MK+ + D Y I++
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIII 405
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
SG + + D K E F+ + G P V TY + L K + ++ + + MI+ G +
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P+ V ++ +++A V M KG++ +Y I + L + E +
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
+M R F +I M + G E + L+K+I +S
Sbjct: 526 FNQMHASKIVIRDDIFSWVISSMEKNGE-KEKIHLIKEIQKRS 567
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 322 FDEMLVLGLIPDVYTYNVYINGLC--KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
F EM +GLIP T+ I LC K V+EA + MI+ G P+ LG L
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCL 795
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 439
CE G+ AK + +G G + + Y I + L ++ EA L +
Sbjct: 796 CEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQ 854
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
T+ +I+ + Q+G + +AL+ + + PG + +L+++
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVY 898
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 128/294 (43%), Gaps = 4/294 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ ++S R +D ++++ M ++G D + +++IS + + + L+V+
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI--GKGLLVFEK 249
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
MRK GF + MIR L RG AL +M + GI + Y ++L I
Sbjct: 250 MRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEK 309
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + D+M+ + I + + + C K+ EA++++ + +
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ LC A + A ++ M + ++ + + Y I++ G + + ++ +A E + K
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL-HSGSD 487
PR ST+ I+ + + + L +++ P + A A++ H G +
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 130/311 (41%), Gaps = 42/311 (13%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC--EQNDVTSAEALVV 251
T+ +LIS + +++ + + M + GF LD +++I SLC + D+ AL
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDL----ALEF 281
Query: 252 WGDMRKLGFCPGVMDFT--------------------DMIR-----------FLVK---- 276
+ +M + G G+ + DM+R +L+K
Sbjct: 282 YKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCV 341
Query: 277 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 336
+ +AL ++ ++K + D + I++ G+ V E+ D M L D
Sbjct: 342 SGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNV 400
Query: 337 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 396
Y + I+G +QN V +A++ + + K G P V T ++ L + K + EM
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 397 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
G+E + ++ G +G+ + EA + M +K P ++ + +C+ +
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 457 EALELMKKIVA 467
E +++ ++ A
Sbjct: 521 EIIKIFNQMHA 531
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+MR P + +T ++ +E A I Q+++DG++PDV Y ++ G
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
E+F M +G PD +YN+ ++ + +A + + M +LG P + +
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLK 432
LL A +A D++K + ++KEM GVE + ML+ L G+ + + +L EM
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTKMEKILAEMEN 467
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
ST++ +I + G + EL ++ K+F P W +
Sbjct: 468 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 167/418 (39%), Gaps = 47/418 (11%)
Query: 83 PTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFY--GLADR---I 137
PT + Y LIK ++ VL +E +P+ I V + Y GL R
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVL--VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT 245
Query: 138 QDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRV 197
++A+D+F R+ R RC PT M ++ + + + + T+
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTA 304
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
L++A R + A +I + EDG D + + ++ S +
Sbjct: 305 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS------------------R 346
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
G+ G + I + M+ G +PD Y I++ G +
Sbjct: 347 AGYPYGAAE-------------------IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+ +F+EM LG+ P + ++ + ++ K V + IV M + G +P+ N++L
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEMLKKCFY 436
G +K + ++ EM ++ TY I+++ + GKA E L E+ +K F
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILIN-IYGKAGFLERIEELFVELKEKNFR 506
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 494
P T+ + I +K L + LE+ ++++ AP + LL S+ + T
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVT 564
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 11/292 (3%)
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFG---LDGKICSLIISS 236
LL+S+++ E T+ +LI A C ++ A +L M + + + I
Sbjct: 181 LLESRYVPT---EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 237
Query: 237 LCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK 296
L ++ T EA+ V+ M++ P + MI K + + + +M+ K
Sbjct: 238 LMKRKGNTE-EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 296
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
P++ YT +++ EG K +E+F+++ GL PDVY YN + + A +I
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
M +GC+P+ + N ++ A AG S A+ V +EM G+ + ++ ++L
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
++ + +++EM + P + ++++ + G + M+KI+A+
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK----MEKILAE 464
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 3/232 (1%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
QHM + +++ +++ A R A + M G K L++S+ + DV
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
T EA+V +M + G P M+ + + IL +M+ D+ Y
Sbjct: 421 TKCEAIV--KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
I+++ G +++ELF E+ PDV T+ I ++ + +++ + MI
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 538
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
GC P+ T LL A + + V++ M KGV ++ ++M L
Sbjct: 539 GCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVTVSSLVPKLMAKSLT 589
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 6/197 (3%)
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
+++ +PDV+C+ +++ + Y + + L+ ++L +P TY + I C
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNT----LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
++ A ++ M P + + G + G+ +A V + M +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 406 TYRIMLDGLVGKAEIGEASLLLE-EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
TY +M++ L GKA S L EM P T+ ++ ++GL +A E+ ++
Sbjct: 266 TYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 465 IVAKSFAPGARAWEALL 481
+ P + AL+
Sbjct: 325 LQEDGLEPDVYVYNALM 341
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 329
+I L K + +A I + G++PDV Y + ++ + ++L+ EM+ G
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNM----MIRFSSLGRAEKLYAEMIRRG 75
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 389
L+PD TYN I+GLCKQNK+ +A ++ S C T NTL+ C+A +
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKVSKS-----CS----TFNTLINGYCKATRVKDGM 126
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
+ EM +G+ N+ TY ++ G + A + +EM+ Y S TF +I+ +
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186
Query: 450 CQKGLINEALELM 462
C + + +A+ ++
Sbjct: 187 CSRKELRKAVAML 199
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 218 MIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRF--LV 275
M E +D ++II LC+ EA ++ ++ G P V + MIRF L
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFD--EAGNIFTNLLISGLQPDVQTYNMMIRFSSLG 62
Query: 276 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 335
+ E+ LY +M + G+ PD + Y ++ G+ + + ++
Sbjct: 63 RAEK----LYA--EMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCS 107
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
T+N ING CK +V + + + M + G NV+T TL+ + GD + A + +EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEE 429
GV + T+R +L L + E+ +A ++LL++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQK 202
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
D YN+ I+GLCK K DEA I +++ G +P+V T N ++ L +A+ +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
EM +G+ + TY M+ GL + ++ +A ++ K C STF+ +I C+
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSKSC-----STFNTLINGYCKA 119
Query: 453 GLINEALELMKKIVAKSFAPGARAWEALL 481
+ + + L ++ + + L+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLI 148
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 2/232 (0%)
Query: 247 EALVVWGDMRKL-GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
EA V+ +M K+ G P + + MIR L + + I+ +M++ IKP + ++
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+ G E + ++ ++ M G+ V TYN+ I LCK+ K EA ++D ++
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
+PN VT + L+ C +L +A + + M G + + Y ++ L + A +
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALI 343
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 477
L E ++K + P S ++ + + ++EA EL+ +V + F W
Sbjct: 344 LCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI-AVVKEKFTRNVDLW 394
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 222 GFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGM 281
G D + + +I LCE +S+ ++V +M + P F MI KEE+
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIV--AEMERKWIKPTAASFGLMIDGFYKEEKFD 234
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
+ ++ M + G+ V Y I++ + + L D ++ + P+ TY++ I
Sbjct: 235 EVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLI 294
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
+G C + +DEA+ + + M+ G KP+ TL+ LC+ GD A + +E K
Sbjct: 295 HGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLL 427
+ + +++GL ++++ EA L+
Sbjct: 355 PSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYI 341
++ ++Q I V +L + DY + + ++ EM + G+ PD+ TYN I
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
LC+ + IV M + KP + ++ + + + VM+ M GV
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
+ + TY IM+ L + + EA L++ ++ P S T+ +I C + ++EA+ L
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 462 MKKIVAKSFAPGARAWEALL--LHSGSDL 488
+ +V + P + + L+ L G D
Sbjct: 310 FEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 127/316 (40%), Gaps = 13/316 (4%)
Query: 69 LSTLIDSFKSYSCDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLI 128
+S L+D F P P + F ++ ++ + + +E++E P +
Sbjct: 94 VSQLLDGF--IQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNA 151
Query: 129 RFYG--LADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHM 186
+ +A ++A ++ +P+ I+ + +
Sbjct: 152 LLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK 211
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
I+ ++F ++I + + D K++ M E G + +++I LC++ A
Sbjct: 212 WIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEA 271
Query: 247 EAL---VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+AL V+ MR P + ++ +I EE +A+ + M +G KPD CY
Sbjct: 272 KALIDGVMSCRMR-----PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
++ + GD+ L E + +P +NGL ++KVDEA +++ +++K
Sbjct: 327 TLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI-AVVKE 385
Query: 364 GCKPNVVTCNTLLGAL 379
NV N + AL
Sbjct: 386 KFTRNVDLWNEVEAAL 401
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 157/416 (37%), Gaps = 77/416 (18%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTP---TVXXXXXXXXXXXXXXXXXXMVPQI 179
I+ +IR + + + A LFF + ++ C P T ++ +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 180 LLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISS--- 236
L I ST+ LI+A A+++ M ++G G D ++++S+
Sbjct: 73 L----RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 128
Query: 237 ------------------------------LCEQNDVTSAEALVVWGDMR-KLGFC-PGV 264
C S++AL ++ MR K C P V
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 265 MDFTDMIR-FLVKEE--------------------------------RGMD--ALYILNQ 289
+ FT ++ + VK E GM AL +L
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 290 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 349
+KQ+GI PDVV YT +L+ K E+F M P+V TYN I+
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 409
+ EA++I M + G KPNVV+ TLL A + V+ +G+ LN Y
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 410 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+ + AE+ +A L + M KK S TF +I C+ EA+ +K++
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 139/330 (42%), Gaps = 35/330 (10%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDG----------------FGLDGKI- 229
K+R + +TF ++I L ++ + A+ + N M E + + G+I
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 230 -CSLIISSLCEQ----NDVT-------------SAEALVVWGDMRKLGFCPGVMDFTDMI 271
C + ++ + N V+ S AL V GD+++ G P V+ +T ++
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 272 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 331
+ + A + M+++ KP+VV Y ++ + G + E+F +M G+
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
P+V + + + K ++ + G N N+ +G+ A +L KA +
Sbjct: 326 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+ M K V+ + T+ I++ G ++ EA L+EM + +++C +
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 452 KGLINEALELMKKIVAKSFAPGARAWEALL 481
+G + EA + ++ P A+ ++L
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 37/262 (14%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A+ + DM + P + ++I +AL + +M +G+ PD+V + IVLS
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------- 360
+ Y K F+ M + PD T+N+ I L K + +A+ + +SM
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 361 ------------------------------IKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
+ G KPN+V+ N L+GA G A
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
V+ ++ G+ ++ +Y +L+ + G+A + M K+ P T++ +I
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 451 QKGLINEALELMKKIVAKSFAP 472
G + EA+E+ +++ P
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKP 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
K++ + TF +LIS CR+ + A+ L M + L ++ S ++ + +Q VT A
Sbjct: 393 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
E+ ++ M+ G P V+ +T M+ E+ A + +M+ +GI+PD + + ++
Sbjct: 453 ES--IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE---AIQIVDSMIKL 363
G + L D ++ IP +T V+ N + E AI ++ M
Sbjct: 511 RAFNKGGQPSNVFVLMD-LMREKEIP--FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 567
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
++ N +L ++G + + ++ GV +NL TY I+L+ L+ +
Sbjct: 568 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 627
Query: 424 SLLLEEMLKKCFYPRSSTFDNII 446
+LE M P + + +II
Sbjct: 628 IEVLEWMSGAGIQPSNQMYRDII 650
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
LF EM PD TY+ IN + + A+ ++D M++ P+ T N L+ A
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 381 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 440
+G+ +A V K+M GV +L T+ I+L + +A E M P ++
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 441 TFDNIICCMCQKGLINEALELMKKIVAK 468
TF+ II C+ + G ++AL+L + K
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREK 180
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
+C + MIR + A + +M++ KPD Y +++ G +
Sbjct: 7 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
L D+ML + P TYN IN EA+++ M G P++VT N +L A
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CFY 436
SKA + M V + T+ I++ L + +A L M +K C
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-R 185
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P TF +I+ KG I + + +VA+ P ++ AL+
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 5/202 (2%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
AEA+ ++ M + G P V+ ++ + ++ ++ +L+ + GI + Y
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+ + + K L+ M + D T+ + I+G C+ +K EAI + M L
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
+++L A + G +++A+ + +M + G E ++ Y ML + G+A
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 489
Query: 426 LLEEMLKKCFYPRSSTFDNIIC 447
L EM P D+I C
Sbjct: 490 LFLEMEANGIEP-----DSIAC 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 104/263 (39%), Gaps = 3/263 (1%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKS 183
+ L+ YG + + A ++F + + R P V V +I +
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV-EIFRQM 319
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ I+ + L++A R ++ +L+ G L+ + I S ++
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A AL + MRK + FT +I + + +A+ L +M+ I Y+
Sbjct: 380 EKAIAL--YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS 437
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
VL +G + + +F++M + G PDV Y ++ K +A ++ M
Sbjct: 438 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Query: 364 GCKPNVVTCNTLLGALCEAGDLS 386
G +P+ + C+ L+ A + G S
Sbjct: 498 GIEPDSIACSALMRAFNKGGQPS 520
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
+M +DG++ D + Y+ +++ Y K E F+ M GL+PD TY+ ++ K
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
KV+E + + + + G KP+ + + L EAGD + V++EM V+ N+ Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
+L+ + + G A L EML+ P T ++ + +AL+L +++ AK
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 469 SF 470
+
Sbjct: 391 KW 392
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A+ +M + G+ PD V Y+ +L G ++ L++ + G PD ++V
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
+ D ++ M + KPNVV NTLL A+ AG A+ + EM G+
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-GLINEALEL 461
N T ++ + GKA +L L E +K +P N + MC GL EA L
Sbjct: 360 NEKTLTALVK-IYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 179 ILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
+L + + M ++ + L+ A+ R + A + N M+E G + K + ++
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 239 EQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKP 297
+ + +AL +W +M+ + + + ++ +A + N MK+ +P
Sbjct: 373 KAR--WARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP 430
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
D YT +L+ + G K ELF+EML G+ +V + L K ++D+ + +
Sbjct: 431 DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF 490
Query: 358 DSMIKLGCKPNVVTCNTLLG--ALCEAGD 384
D IK G KP+ C LL ALCE+ +
Sbjct: 491 DLSIKRGVKPDDRLCGCLLSVMALCESSE 519
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
Query: 218 MIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKE 277
M++DG LD S II+ C + +A+ + M K G P + ++ ++ K
Sbjct: 212 MVKDGVELDNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS 269
Query: 278 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 337
+ + L + + G KPD + ++++ GDY + + EM + + P+V Y
Sbjct: 270 GKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVY 329
Query: 338 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 397
N + + + K A + + M++ G PN T L+ +A A + +EM
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 398 KGVELNLHTYRIMLDGLVGKAEIG---EASLLLEEMLK--KCFYPRSSTFDNIICCMCQK 452
K ++ Y +L+ A+IG EA L +M + +C P + ++ ++
Sbjct: 390 KKWPMDFILYNTLLNMC---ADIGLEEEAERLFNDMKESVQC-RPDNFSYTAMLNIYGSG 445
Query: 453 GLINEALELMKKIV 466
G +A+EL ++++
Sbjct: 446 GKAEKAMELFEEML 459
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
+ +L+ ALC R++ ++ + + GF + L++ + ++ E ++
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF--EVKKIYS 881
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
M+ G+ P + + MI L K +R DA ++++M++ K ++ + +L A
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIE 941
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
DY K +++ + GL PD TYN I C+ + +E ++ M LG P + T
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
+L+ A + L +A+ + +E+ KG++L+ Y M+ +A LL+ M
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
P +T ++ G EA +++ +
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 125/288 (43%), Gaps = 1/288 (0%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ ++ R + A ++++ M + G D + +I++ + +T A+ +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+R G P + + ++ ++ A+ + M+ +PD+ Y ++S G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + LF E+ + G PD TYN + ++ ++ ++ M K+G + +T NT
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 375 LLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
++ + G L A + K+M GL G + TY +++D L EA+ L+ EML
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P T+ +IC + G EA + ++ P A+ +L
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 131/292 (44%), Gaps = 5/292 (1%)
Query: 194 TFRVLISALCRIRRV--DYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
+F LI+A + + + AV++L+ + G D + ++S+ +++ A + V
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA--VKV 319
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ DM P + + MI + +A + +++ G PD V Y +L
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVV 370
E + K+ E++ +M +G D TYN I+ KQ ++D A+Q+ M L G P+ +
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T L+ +L +A +A +M EM G++ L TY ++ G + EA M
Sbjct: 440 TYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 482
L+ P + + ++ + + +A L + +++ P +E ++L
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 3/260 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
+R + T+ L+SA R +D AVK+ M D + +IS AE
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
L + +++ GF P + + ++ +E + QM++ G D + Y ++
Sbjct: 353 RLFMELELK--GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 308 GIVAEGDYVKLDELFDEMLVL-GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+G +L+ +M L G PD TY V I+ L K N+ EA ++ M+ +G K
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P + T + L+ +AG +A+ M G + + Y +MLD L+ E +A L
Sbjct: 471 PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL 530
Query: 427 LEEMLKKCFYPRSSTFDNII 446
+M+ P + ++ +I
Sbjct: 531 YRDMISDGHTPSYTLYELMI 550
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 3/242 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +IS R A ++ + GF D + ++ + + + + V+
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE--VYQ 391
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVLSGIVAE 312
M+K+GF M + +I K+ + AL + MK G PD + YT+++ +
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
V+ L EML +G+ P + TY+ I G K K +EA M++ G KP+ +
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+ +L L + KA G+ ++M G + Y +M+ GL+ + + + +M +
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 433 KC 434
C
Sbjct: 572 LC 573
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 229 ICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN 288
+C ++ C+ +A +V + + F M +TD+I K++ A ++
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPM-YTDIIEAYGKQKLWQKAESVVG 776
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
++Q G PD+ + ++S G Y + +F+ M+ G P V + N+ ++ LC
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+++E +V+ + +G K + + +L A AG++ + K + M G + YR
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
+M++ L + +A +++ EM + F + +++++ + +++ ++I
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 469 SFAPGARAWEALLL 482
P + L++
Sbjct: 957 GLEPDETTYNTLII 970
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 117/268 (43%), Gaps = 5/268 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+R++I LC+ +RV A +++ M E F ++ I + ++ D + + V+
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYK--KTVQVYQR 952
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+++ G P + +I ++ R + ++ QM+ G+ P + Y ++S +
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ ++LF+E+L GL D Y+ + +A +++ M G +P + T +
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ + +G+ +A+ V+ + VEL Y ++D + + L EM K+
Sbjct: 1073 LMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELM 462
P + C + E +E+M
Sbjct: 1133 LEPDHRIW---TCFVRAASFSKEKIEVM 1157
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 334 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK--AKGV 391
V YN + + K +A ++VD+M + GC P++++ NTL+ A ++G L+ A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+ + G+ + TY +L + + A + E+M P T++ +I +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 452 KGLINEALELMKKIVAKSFAPGARAWEALL 481
GL EA L ++ K F P A + +LL
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 4/280 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ L+SA + + A I N M+ DG + ++++ +LC D E VV
Sbjct: 789 TWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCV--DGRLEELYVVVE 846
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+++ +GF M+ + + I + MK G P + Y +++ ++ +G
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE-LLCKG 905
Query: 314 DYVKLDELF-DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
V+ E+ EM ++ +N + + +Q+ + + G +P+ T
Sbjct: 906 KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTY 965
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
NTL+ C + +M++M G++ L TY+ ++ + + +A L EE+L
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
K S + ++ G ++A +L++ + P
Sbjct: 1026 KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 146/308 (47%), Gaps = 20/308 (6%)
Query: 177 PQILLKSQHMKIRIEES-------TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKI 229
P+I L +H K+ I+ + TFR+L+ L ++ A++I M GF +D +
Sbjct: 181 PEIAL--EHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVV 238
Query: 230 CSLIISSLCEQNDVTSAEALVVWGDMRKL--GFCPGVMDFTDMIRFLVKEERGMDALYIL 287
S ++ + +D L ++ ++++ GF + + +++ +E +A+
Sbjct: 239 YSYLMMGCVKNSDADGV--LKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECY 296
Query: 288 NQM--KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP-----DVYTYNVY 340
+ + ++ + Y VL + G + + +LFD + P ++ T+NV
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM 356
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
+NG C K +EA+++ M C P+ ++ N L+ LC+ L++A+ + EM K V
Sbjct: 357 VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
+ + +TY +++D + +I E + + M++ P + ++ + + + G +++A
Sbjct: 417 KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS 476
Query: 461 LMKKIVAK 468
+V+K
Sbjct: 477 FFDMMVSK 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 9/229 (3%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P + F +++ LV + A+ I M G D V Y+ ++ G V D + +L
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 322 FDEML--VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP--NVVTCNTLLG 377
+ E+ + G + D Y + G + EA++ + + K + + N +L
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 378 ALCEAGDLSKA----KGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
AL E G +A V KE + + +NL T+ +M++G + EA + +M
Sbjct: 319 ALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD 378
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
P + +F+N++ +C L+ EA +L ++ K+ P + L+
Sbjct: 379 FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 284 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 343
+ + +M Q G+ + V YT ++ G+ GD E+F EM+ G+ PD+ TYN+ ++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 344 LCKQNKVDEAI---QIVD------SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
LCK K+++A+ ++ D S+ G KPNVVT T++ C+ G +A + ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 454
M G + TY ++ + + ++ L++EM F +ST+ ++ M G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 179
Query: 455 INEA-LELM 462
+++ LE++
Sbjct: 180 LDKGFLEML 188
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
ELF EM GL+ + TY I GL + D A +I M+ G P+++T N LL L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 380 CEAGDLSKAKGVMK---------EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
C+ G L KA K + LKGV+ N+ TY M+ G K EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 485
+ P S T++ +I + G + EL+K++ + FA A + + +LH G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
+M + G + +T +I+ L + A I +M DG+ PD++ Y I+L G+ G
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 314 DYVKLD---------ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
K +LF + + G+ P+V TY I+G CK+ +EA + M + G
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
P+ T NTL+ A GD + + ++KEM
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+++ M + G N VT TL+ L +AGD A+ + KEM GV ++ TY I+LDG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 414 LVGKAEIGEASL---------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
L ++ +A + L + K P T+ +I C+KG EA L +K
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 465 IVAKSFAPGARAWEALL 481
+ P + + L+
Sbjct: 121 MKEDGPLPDSGTYNTLI 137
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA------- 246
T+ LI L + D A +I M+ DG D ++++ LC+ + A
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+ ++ + G P V+ +T MI K+ +A + +MK+DG PD Y ++
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
+ +GD EL EM D TY + +
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M+ G P V+ + +I K+ A ++++M+++ PDV+ YT V+ G+ G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
K E+ EM G PDV YN I C ++ +A ++VD M+K G PN T N
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 375 LLGALCEAGDLSKA 388
L A DL ++
Sbjct: 357 FFRVLSLANDLGRS 370
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 3/294 (1%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
IR + L+ A + ++ + M + G ++++ + + E
Sbjct: 375 IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVE 434
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVL 306
L+ +M LG P V +T +I + ++ D A +MK+ G+KP YT ++
Sbjct: 435 TLL--REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI 492
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G + K F+EM G+ P V TY ++ + + ++I M++ K
Sbjct: 493 HAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIK 552
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
+T NTLL + G +A+ V+ E G++ ++ TY ++++ + + L
Sbjct: 553 GTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQL 612
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
L+EM P S T+ +I + A K +V P R++E L
Sbjct: 613 LKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V +I K ++ + F L+ + C + A+ I M + G + + + ++
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
+ + N + E L +MR G P + ++ + + +L +M+ G+
Sbjct: 388 AYNKSNHIEEVEGLFT--EMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDEL----FDEMLVLGLIPDVYTYNVYINGLCKQNKVD 351
+P+V YT ++S A G K+ ++ F M +GL P ++Y I+ +
Sbjct: 446 EPNVKSYTCLIS---AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 352 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 411
+A + M K G KP+V T ++L A +GD K + K M + ++ TY +L
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
DG + EA ++ E K P T++ ++ + G + +L+K++ A +
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 472 PGARAWEALL 481
P + + ++
Sbjct: 623 PDSITYSTMI 632
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK-VDEAIQI 356
DV Y +SG+ A Y E+++ M + + PD T + I L K + E +I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ M + G K + L+ + C+ G +A + EM KG+ N Y ++D
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
I E L EM K P ++T++ ++ ++ + L++++ P ++
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 477 WEALLLHSG 485
+ L+ G
Sbjct: 452 YTCLISAYG 460
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 7/290 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGL-DGKICSLIISSLCEQNDVTSAEALVVW 252
TFR++ V A+ + + D F L D ++ +LCE V AE L
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKL--DDFNLRDETSFYNLVDALCEHKHVVEAEELCFG 176
Query: 253 GDMRKLGFCPGVMDFTDMI-RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
++ GF ++I R K +M +G+ D+ Y+I + +
Sbjct: 177 KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCK 236
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
G K +L+ EM + DV YN I + V+ I++ M + GC+PNV T
Sbjct: 237 SGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT 296
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
NT++ LCE G + A ++ EM +G + + TY + L +EI L M+
Sbjct: 297 HNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMI 353
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ P+ T+ ++ + G + L + K + P + A+ A++
Sbjct: 354 RSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVI 403
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 37/283 (13%)
Query: 191 EESTFRVLISALCRIRRVDYAVKIL--NCMIEDGFGL-DGKICSLIISSLCEQNDVTSAE 247
+E++F L+ ALC + V A ++ +I +GF + + KI +LI+ + +
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLG--WWGK 207
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
W M G + ++ + + K + A+ + +MK +K DVV Y V+
Sbjct: 208 CKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIR 267
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
I A +F EM G P+V T+N I LC+ ++ +A +++D M K GC+P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 368 NVVTCN-------------TLLGALCEAGDLSKAKG-------------------VMKEM 395
+ +T +L G + +G K V K M
Sbjct: 328 DSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
G + Y ++D L+ K + A EEM+++ PR
Sbjct: 388 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPR 430
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 11/288 (3%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
S F+ + L ++R + N I GFG G + +S E + +S V
Sbjct: 228 RSEFKRVFEKLKGMKRFKFDTWSYNICIH-GFGCWGDL-DAALSLFKEMKERSS-----V 280
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+G F P + + +I L + DAL + +++K G +PD Y I++ G
Sbjct: 281 YGS----SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK 336
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
++ EM G +PD YN ++G K KV EA Q+ + M++ G + + T
Sbjct: 337 SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWT 396
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N L+ L G + ++ KG ++ T+ I+ L + ++ A L+EEM
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEME 456
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
+ F T +++ ++G + +LMK I + P W A
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 160/353 (45%), Gaps = 59/353 (16%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
VP +L + + ++++ ++L+ +L R + + A+ +L+ M E G L+ + ++
Sbjct: 111 VPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLI 170
Query: 236 SLCEQNDVTSAEALVV-------------WGDMRKLGFCPGVMDFTDMIRFLVKEE---- 278
+L +++++ A +++ G + + + PG + +++ L + +
Sbjct: 171 ALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSE 230
Query: 279 --------RGMD------------------------ALYILNQMKQ------DGIKPDVV 300
+GM AL + +MK+ PD+
Sbjct: 231 FKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDIC 290
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y ++ + G ++DE+ V G PD TY + I G CK ++D+A++I M
Sbjct: 291 TYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV--GKA 418
G P+ + N LL +A +++A + ++M +GV + TY I++DGL G+A
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 471
E G L ++ KK + + TF + +C++G + A++L++++ + F+
Sbjct: 411 EAGFT--LFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 263 GVMDFTD-----MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
GV D T M+ VK+ A +L+QM ++ D+ Y +++ G+ G
Sbjct: 624 GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADL 683
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
+ D + G D+ YN IN L K ++DEA Q+ D M G P+VV+ NT++
Sbjct: 684 ASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL---VGKAEIGEASLL 426
+AG L +A +K M G N H +LD L + KA +AS +
Sbjct: 744 VNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKEMEKARFKKASFV 794
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 30/317 (9%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
+ + + +CR + +L M EDG LD + +++ SL SA ++ +
Sbjct: 93 TAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDY 152
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYIL--------NQMKQDGIK-------P 297
M +LG C + ++ LVK+ AL IL N D + P
Sbjct: 153 --MEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLP 210
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQI 356
V +L G+ + +F+++ + D ++YN+ I+G +D A+ +
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSL 270
Query: 357 VDSMIKLGC------KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 410
M + P++ T N+L+ LC G A V E+ + G E + TYRI+
Sbjct: 271 FKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRIL 330
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ G + +A + EM F P + ++ ++ + + EA +L +K+V +
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE-- 388
Query: 471 APGARA--WEALLLHSG 485
G RA W +L G
Sbjct: 389 --GVRASCWTYNILIDG 403
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
Y ++S V +G + + D+M D+ TYNV I GL K + D A ++D +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
K G ++V NTL+ AL +A L +A + M G+ ++ +Y M++ ++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 422 EASLLLEEMLKKCFYPRSST 441
EA L+ ML P T
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT 772
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 37/205 (18%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+ ST+R+LI C+ R+D A++I
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRI------------------------------------ 346
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+G+M+ GF P + + ++ +K + +A + +M Q+G++ Y I++ G+
Sbjct: 347 -YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLF 405
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G LF ++ G D T+++ LC++ K++ A+++V+ M G ++V
Sbjct: 406 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLV 465
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEM 395
T ++LL + G + +MK +
Sbjct: 466 TISSLLIGFHKQGRWDWKEKLMKHI 490
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 298 DVVCYTIVLSGIVAEGDYV---KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
DV LS +++GD KL E+F+ M V L YTYN ++ K+ A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTYNSMMSSFVKKGYFQTAR 650
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
++D M + C ++ T N ++ L + G A V+ + +G L++ Y +++ L
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 415 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ EA+ L + M P +++ +I + G + EA + +K ++ P
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 128/263 (48%), Gaps = 8/263 (3%)
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V ++LL+ Q + +E+TF L+ +++ L+ MI G + + + S
Sbjct: 928 VNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTS 987
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDF-TDMIRFLVKEERGMDALYILNQMKQDG 294
SLC+ DV +AL +W M G+ G T ++ L+ + A L ++ ++G
Sbjct: 988 SLCDNGDVK--KALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 295 I-KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
+ P+ Y ++ + G+ L + ML IP +Y+ INGL + N++D+A
Sbjct: 1046 MMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKA 1102
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+ M++LG P++ T + L+ CEA + +++ ++K M G + ++ ++D
Sbjct: 1103 MDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDR 1162
Query: 414 LVGKAEIGEASLLLEEMLKKCFY 436
+ +AS ++ EM++KC Y
Sbjct: 1163 FRVEKNTVKASEMM-EMMQKCGY 1184
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 197 VLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMR 256
LI L ++ A L M+ +G KI +++ C+ N+ E V G M
Sbjct: 808 ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEE--VLGLMV 865
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD-VVCYTIVLSGIVAEGDY 315
+ V + + +R + E + + A+ + + P V+ Y +++ + ++
Sbjct: 866 RKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNH 925
Query: 316 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
++++++ EM G++PD T+N ++G +++ + +MI G KPN + +
Sbjct: 926 LEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAV 985
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI-MLDGLVGKAEIGEASLLLEEMLKKC 434
+LC+ GD+ KA + + M KG L + +++ L+ K EI +A L + +
Sbjct: 986 TSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ +DNII + +G ++ A+ L+ ++ PG+ ++++++
Sbjct: 1046 MM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVI 1090
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 42/283 (14%)
Query: 226 DGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALY 285
+G C LI + +D S +A++++ MR+ G P + +I LV+ R A
Sbjct: 183 EGIFCDLIGKYV---DDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYR 239
Query: 286 I----------LNQMKQDGIKP--DVVCYT-------------IVLSGIVAEGDYVKL-- 318
I LN M D I +++C + L I+ Y K+
Sbjct: 240 ICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITI 299
Query: 319 ----DELFDEML-VLGLI---PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+ F+++L +G + PDV+ N ++ LC++ + A ++ + LG K + V
Sbjct: 300 GYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEV 359
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T L+G C GD+ +A + E+ KG + ++++Y +L GL K +L+EM
Sbjct: 360 TFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEM 419
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 473
+ STF ++ C+ EA K+IV K F G
Sbjct: 420 KENGMMLSLSTFKIMVTGYCKARQFEEA----KRIVNKMFGYG 458
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 131/330 (39%), Gaps = 55/330 (16%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL--IISSLCEQNDVTSAE 247
+ E T+ VL++ +VD AV + E FG+D + + ++ LC V AE
Sbjct: 176 VNEKTYEVLLNRYAAAHKVDEAVGVFERRKE--FGIDDDLVAFHGLLMWLCRYKHVEFAE 233
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-------DGIKPDVV 300
L FC +F I+ + G L +++ K+ +PDVV
Sbjct: 234 TL----------FCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVV 283
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y +++ + +G K EL+ M PDV N I+ LC + ++ EA+++ +
Sbjct: 284 SYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI 343
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG--------------------- 399
+ G PNVVT N+LL LC+ K +++EM LKG
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSK 403
Query: 400 -------------VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
E+ Y +M V + + + EM + P T+ I
Sbjct: 404 DVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRI 463
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARA 476
+ KG I EAL +++++K P R
Sbjct: 464 HGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 285 YILNQM--KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
YIL+Q+ KQ + Y +L + + + ++FDEM + TY V +N
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLN 186
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVT------------------------------- 371
+KVDEA+ + + + G ++V
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246
Query: 372 ---CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
N +L C G++ +AK K++ ++ +Y M++ L K ++G+A L
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
M P +N+I +C K I EALE+ ++I K P + +LL H
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH 361
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 37/278 (13%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ M ++ T+ LI CR+RRV A+++L M ++ + + II L E +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ A LG M RF V E P +V Y
Sbjct: 337 SEA-----------LGM---------MERFFVCES-----------------GPTIVTYN 359
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
++ GD ++ M+ G+ P TYN + K NK +E + + +I+
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G P+ +T + +L LCE G LS A V KEM +G++ +L T +++ L + EA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 461
+ +++ P+ TF I + KG+ + A L
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 88/185 (47%)
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
P V + I+L+G + ++L++EM + + P V TY I G C+ +V A+++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
++ M + N + N ++ L EAG LS+A G+M+ + + TY ++
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 476
++ AS +L+ M+ + P ++T+++ + E + L K++ +P
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 477 WEALL 481
+ +L
Sbjct: 428 YHLIL 432
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 72/142 (50%)
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
+P V +N+ +NG + K+ +A ++ + M + KP VVT TL+ C + A
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
V++EM + +E+N + ++DGL + EA ++E P T+++++ C
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 451 QKGLINEALELMKKIVAKSFAP 472
+ G + A +++K ++ + P
Sbjct: 367 KAGDLPGASKILKMMMTRGVDP 388
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK---PDVVCYTIVLSGIVAEGDYV 316
F P +T +++ +K R D +L M++ + PD V YT V+S V G
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTL 375
+ ++ EM +G+ + TYNV + G CKQ ++D A ++ M + G +P+VV+ N +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
+ D + A EM +G+ +Y ++ + A+ + +EM+
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND-- 587
Query: 436 YPRSS----TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
PR ++ ++ C+ GLI +A ++ ++ F P + +L
Sbjct: 588 -PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVL 306
A V +M ++G + + +++ K+ + A +L +M +D GI+PDVV Y I++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGC 365
G + D F+EM G+ P +Y + + A ++ D M+
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
K +++ N L+ C G + A+ V+ M G N+ TY + +G+ + G+A L
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 426 LLEEMLKKC 434
L +E+ ++C
Sbjct: 651 LWKEIKERC 659
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+E T+ ++SA +D A ++L M G + ++++ C+Q + AE L
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL- 509
Query: 251 VWGDMRKL----GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+R++ G P V+ + +I + + AL N+M+ GI P + YT ++
Sbjct: 510 ----LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
G + +FDEM+ + D+ +N+ + G C+ +++A ++V M + G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
PNV T +L + +A A + KE+
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
L+++ R++ ++ +L A + + YAV ++ MI G+ K + ++SL
Sbjct: 142 LRNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSAS 201
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
D E++ ++ + V F D + LV + R PD
Sbjct: 202 GDDGPEESIKLF-----IAITRRVKRFGD--QSLVGQSR-----------------PDTA 237
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
+ VL+ GD K +LF+EM PDV TYNV I + + + + +++ +
Sbjct: 238 AFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERI 297
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
I G K + T ++L+ A GDL A+ +++ M K +L
Sbjct: 298 IDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDL 339
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ + ++ V+ ++ A ++L Q+KQ G KP V Y +++ ++A Y + E
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
F +M IP+ Y V +N L K+ K DEA+ V+ M G + L LC
Sbjct: 651 FRKMQKSS-IPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 441
AG ++ ++K++ + + TY ++ V I A+ + ++M K C P T
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVC-SPNLVT 768
Query: 442 FDNIICCMCQKGLINEALELMKKI 465
+ ++ Q GL EA EL +K+
Sbjct: 769 CNIMLKAYLQGGLFEEARELFQKM 792
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCY-----TIVLSGIVAEGDYV---- 316
+T + L K R ++AL + + M Q PD+V Y T+ +G + E YV
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 317 ------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
K E L PDV YN +N ++ + + A ++ + + G KP+ V
Sbjct: 570 RSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPV 629
Query: 371 TCNTLLGAL--CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
T ++ + CE +L ++M + N YR++++ L + + EA +E
Sbjct: 630 TYGLIMEVMLACEKYNL--VHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVE 686
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+M + ++ + ++ C+C G NE L ++KKI
Sbjct: 687 DMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKI 723
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P + + ++ L KE + +A++ + M+ GI Y + + + G + +
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNM 719
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
++ + P V TY I + A I D M K+ C PN+VTCN +L A +
Sbjct: 720 LKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQ 778
Query: 382 AGDLSKAKGVMKEMGLKGVEL------------NLHTYRIMLDGLVGKAEIGEASLLLEE 429
G +A+ + ++M G + + +T+ MLD + + + E
Sbjct: 779 GGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYRE 838
Query: 430 MLKKCFY 436
ML+ ++
Sbjct: 839 MLRHGYH 845
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-------TIVLSGIVAEGDYVKLDELF 322
+I + K ++ AL I + +G +P+ + Y I+LS G + L
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
++M GL P +N + K ++ AIQI +M+ G KP V++ LL AL +
Sbjct: 447 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 506
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
+A V M G+E NL+ Y M L G+ + LL+EM K P TF
Sbjct: 507 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 566
Query: 443 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 487
+ +I + GL A E ++ +++ P +E L+ +D
Sbjct: 567 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALAND 611
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%)
Query: 286 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
+LN+M+ G+KP + VL + ++F M+ G P V +Y ++ L
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 346 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 405
K DEA ++ + MIK+G +PN+ T+ L + ++KEM KG+E ++
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVV 564
Query: 406 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
T+ ++ G G A M + P T++ +I + A EL K
Sbjct: 565 TFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKA 624
Query: 466 VAKSFAPGARAWEALL 481
+ ++ ++A++
Sbjct: 625 QNEGLKLSSKPYDAVV 640
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 8/244 (3%)
Query: 184 QHMKIRIEESTFRV---LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+ ++ R E + V LI + + ++ A++I ++++G + L++S
Sbjct: 370 KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 429
Query: 241 NDVTSAEALVVWG-----DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
S + WG M G P + ++ K A+ I M +G
Sbjct: 430 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 489
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
KP V+ Y +LS + Y + +++ M+ +G+ P++Y Y + L Q K +
Sbjct: 490 KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 549
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
++ M G +P+VVT N ++ G A M + VE N TY ++++ L
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 416 GKAE 419
A+
Sbjct: 610 NDAK 613
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 9/219 (4%)
Query: 253 GDMRKLGFCPGVMD---FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
G+ RK+ G D F MI + +AL ++ MK GIKPDV+ + ++SG
Sbjct: 169 GNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGF 228
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
+ K+ E+ + M + G PDV ++ I+GL + ++A M+ G PN
Sbjct: 229 SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNS 288
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLE 428
T TLL A + K + + G+E + +LD + GK I EA +L
Sbjct: 289 ATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD-MYGKCGFISEAMILFR 347
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
+ KK + TF+++I C GL ++A+EL ++ A
Sbjct: 348 KTPKKT----TVTFNSMIFCYANHGLADKAVELFDQMEA 382
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F ++ CR V A +++ MI G + + S+++S + +A+ ++
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE--PQKAVDLFNK 272
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M ++G P ++ +T +I+ V +A +L++++ +G+ PD+V +++ G
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ + ++F + L+PD YT+ ++ LC K D +I +G ++VT N
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG---IGTDFDLVTGNL 389
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L + G S A V+ M K L+ +TY + L L A + + ++K+
Sbjct: 390 LSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEK 449
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ + II + + G N A+ L K+ + + +
Sbjct: 450 KHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKY 485
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
GF P F ++R + +A ++ M GI V +++++SG G+ K
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
+LF++M+ +G P++ TY I G VDEA ++ + G P++V CN ++
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 414
G +A+ V + + + + +T+ +L L
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSL 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 44/327 (13%)
Query: 81 CDPTPNAYYFLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYL-IRFYGLADRIQD 139
C P Y LIK V+ + + VL ++ + P+ + L I Y R ++
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ--SEGLAPDIVLCNLMIHTYTRLGRFEE 335
Query: 140 AVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLI 199
A +F + + + P +VP+I + + + T +L
Sbjct: 336 ARKVFTSLEKRKLVPD-QYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLS 391
Query: 200 SALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG 259
+ +I YA+K+L+ M F LD ++ +S+LC +A
Sbjct: 392 NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA------------- 438
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 319
M + ++KE++ +DA + ++ ++ ++ G Y
Sbjct: 439 --------IKMYKIIIKEKKHLDAHF----------------HSAIIDSLIELGKYNTAV 474
Query: 320 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 379
LF ++ DV +Y V I GL + +++EA + M + G PN T T++ L
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534
Query: 380 CEAGDLSKAKGVMKEMGLKGVELNLHT 406
C+ + K + +++E +GVEL+ +T
Sbjct: 535 CKEKETEKVRKILRECIQEGVELDPNT 561
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 38/318 (11%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I + + + +L+S R AV + N MI+ G + + +I + V E
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVD--E 300
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
A V ++ G P ++ MI + R +A + +++ + PD + +LS
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 308 GIVAEGDY-----------VKLDELFDEML---------------VLGLIP------DVY 335
+ G + D + +L VL ++ D Y
Sbjct: 361 SLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCY 420
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
TY VY++ LC+ AI++ +IK + + ++ +L E G + A + K
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC 480
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
L+ L++ +Y + + GLV I EA L +M + YP T+ II +C++
Sbjct: 481 ILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE--- 537
Query: 456 NEALELMKKIVAKSFAPG 473
+ E ++KI+ + G
Sbjct: 538 -KETEKVRKILRECIQEG 554
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 257 KLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDY 315
KL G ++ + IRF R + I L+ G + D+V IVL ++ EG Y
Sbjct: 155 KLNVVNGALEIFEGIRF-----RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 316 VKLDELFDEMLVL--------------------GLIPDVYTYNVYINGLCKQNKVDEAIQ 355
E F ++L L G+ V +++ ++G + + +A+
Sbjct: 210 PN-RERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ + MI++GC PN+VT +L+ + G + +A V+ ++ +G+ ++ +M+
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 453
EA + + K+ P TF +I+ +C G
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL 249
++ ST+ ++I +L + R+D A K+ M E + S ++ S+ + + ++ +
Sbjct: 311 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS--M 368
Query: 250 VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 309
V+ +M+ G P F +I K + AL + ++MK+ G +P+ YT+++
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 310 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 369
G +F +M G +P TY+ + +VD A++I +SM G +P +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL 488
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
+ +LL L + A ++ EM G +++
Sbjct: 489 SSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 7/239 (2%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
+ +I++L K E+ A + ++ G K D Y ++ + +G K E+++ M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
+ D TY + I L K ++D A ++ M + +P+ ++L+ ++ +AG L
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+ V EM G + + ++D ++ A L +EM K F P + II
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 447 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL-LHSGSDLT------YSETTFAGL 498
+ G + A+ + K + F P + LL +H+GS Y+ T AGL
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%)
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 329
+I L K R A + QMK+ ++P ++ ++ + G +++ EM G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 389
P + I+ K K+D A+++ D M K G +PN ++ + ++G L A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
V K+M G TY +L+ G ++ A + M P S++ +++ +
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Query: 450 CQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
K L++ A +++ ++ A ++ A + L+++
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIY 532
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 252 WG-----DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
WG + KL F P ++ T ++ +VKE +L+ + KQ P CY ++
Sbjct: 155 WGPELETQLDKLQFVPNMVHITQSLK-IVKEVDAALSLFRWAK-KQPWYLPSDECYVVLF 212
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY---INGLCKQNKVDEAIQIVDSMIKL 363
G+ D+V + LF+EM+ ++N Y I L K K++ A +
Sbjct: 213 DGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQES 272
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
GCK + T N L+ G KA + + M L+ TY +++ L + A
Sbjct: 273 GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAA 332
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L ++M ++ P S F +++ M + G ++ ++++ ++ P A + +L+
Sbjct: 333 FKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 86/199 (43%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A I M++ D Y +++ + G +LF +M L P ++ ++
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
+ K ++D ++++ M G +P+ +L+ + +AG L A + EM G
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
N Y ++++ ++ A + ++M K F P ST+ ++ G ++ A+++
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 463 KKIVAKSFAPGARAWEALL 481
+ PG ++ +LL
Sbjct: 477 NSMTNAGLRPGLSSYISLL 495
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 2/249 (0%)
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K+Q +I+ T+ L+ A +I M + LDG LII SL +
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 327
Query: 242 DVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC 301
+ +A L RKL P F+ ++ + K R ++ + +M+ G +P
Sbjct: 328 RLDAAFKLFQQMKERKLR--PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
+ ++ G L+DEM G P+ Y + I K K++ A+ + M
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 421
K G P T + LL +G + A + M G+ L +Y +L L K +
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVD 505
Query: 422 EASLLLEEM 430
A +L EM
Sbjct: 506 VAGKILLEM 514
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 5/255 (1%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
++ + + K+R S F L+ ++ + R+D ++K+ M G + +I S
Sbjct: 334 KLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSY 393
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP 297
+ + +A L +W +M+K GF P +T +I K + A+ + M++ G P
Sbjct: 394 AKAGKLDTA--LRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
Y+ +L G ++++ M GL P + +Y + L + VD A +I+
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAG-DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
M +G +V + L+ + +A DL A ++ MG G++ N R + + +
Sbjct: 512 LEMKAMGYSVDVCASDVLMIYIKDASVDL--ALKWLRFMGSSGIKTNNFIIRQLFESCMK 569
Query: 417 KAEIGEASLLLEEML 431
A LLE ++
Sbjct: 570 NGLYDSARPLLETLV 584
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 8/280 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCE-QNDVTSAEALV 250
+ F+ L+ ALCR ++ A + + + F +D + ++I++ C DVT EA
Sbjct: 224 DEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVILNGWCNIWTDVT--EAKR 280
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+W +M P ++ MI K D+L + ++MK+ G+ P + Y ++ +
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLT 340
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
E + + +L ++ GL PD TYN I LC+ K+D A ++ +MI P V
Sbjct: 341 REDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVD 400
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T + L EA + K V+ +M + + T+ ++L L + A + EM
Sbjct: 401 TFHAFL----EAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEM 456
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 470
+ + + I + G + +A E+ ++ +K F
Sbjct: 457 DRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 330 LIP-DVYTYNVYINGLCK-QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 387
L P DV +NV +NG C V EA +I M PN + + ++ + G+L
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
+ + EM +G+ + Y ++ L + EA L++++ ++ P S T++++I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+C+ G ++ A ++ +++++ +P + A L
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFL 406
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
M++ G + +T +I ++ A+ + +M+ +G +P VV YT + + A+G
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ E++ EML + P+ +TY V + L K +EA+ I M ++G +P+ CN
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
L+ + G+ S V+ M GV L Y I ++ L GE+ LL E+
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKENGVVLR---YPIFVEALETLKAAGESDDLLREV 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G K D YT +L G + +F M G++ D TY I+ + VD A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 413
+++ + M GC+P VV+ + L G + +A V KEM V N HTY ++++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 414 LVGKAEIGEA 423
LV + EA
Sbjct: 237 LVATGKCEEA 246
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 259 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
GF +T M+ + R + + MK+ G+ D V YT ++ + + GD
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
L++EM G P V +Y Y+ L +V+EA ++ M++ PN T L+
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLL 426
L G +A + +M GV+ + I L+ KA + GE S +
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNI----LIAKALKFGETSFM 281
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 136/309 (44%), Gaps = 32/309 (10%)
Query: 178 QILLKSQHMKIR-IEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISS 236
QILL + R +++ TF ++ L ++ + + A+ I + + DG + IIS+
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISA 182
Query: 237 LCEQNDVTSAEAL------VVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM 290
LC + V A + V+ G+ +L ++ F ++ VKE R ++ M
Sbjct: 183 LCSRGHVKRALGVMHHHKDVISGN--ELSVYRSLL-FGWSVQRNVKEAR-----RVIQDM 234
Query: 291 KQDGIKPDVVCYTIVL------------SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 338
K GI PD+ C+ +L SG+V E + L EM + P +YN
Sbjct: 235 KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML-----EMRSYKIQPTSMSYN 289
Query: 339 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 398
+ ++ L + +V E+ QI++ M + GC P+ + ++ L G K ++ EM +
Sbjct: 290 ILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIER 349
Query: 399 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
G Y ++ L G + A L E+M + +D +I +C+ G +
Sbjct: 350 GFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 409
Query: 459 LELMKKIVA 467
EL ++ ++
Sbjct: 410 RELWEEALS 418
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 302 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 361
+ VL + + D+ + L ++ D T+++ L K K ++AI I +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 362 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG--LKGVELNLHTYRIMLDGLVGKAE 419
K C + T ++ ALC G + +A GVM + G EL++ YR +L G +
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSV--YRSLLFGWSVQRN 223
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-------GLINEALELMKKIVAKSFAP 472
+ EA ++++M P F++++ C+C++ GL+ EAL +M ++ + P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 473 GARAWEALL 481
+ ++ LL
Sbjct: 284 TSMSYNILL 292
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 5/291 (1%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ MK E + V + + + ++ + K+ + M+E G D + IIS C + +
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIIS--CARQNG 224
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
A+ + M G P + MI + AL + ++ + + + D V ++
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFS 284
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
++ G+Y +++EM LG+ P++ YN I+ + + + +A I +I
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
G PN T L+ A A A + +EM KG+ L + Y +L + EA
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 424 SLLLEEMLKKCFY--PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ ++M K C P S TF ++I G ++EA + ++ F P
Sbjct: 405 FEIFQDM-KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ MR GF + D L K+ R +AL + +Q+K PDVV +T ++
Sbjct: 187 IFHKMRTEGFTNEAVKMFDA---LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV-DEAIQIVDSMIKLGCKPNV 369
G + ++F ML G+ P+ YTY+V I GL K +A + + M+ G PN
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNA 303
Query: 370 VTCNTLLGALCEAGDLSKAKGVMKEMGLKG 399
T + A G A+ +++EM KG
Sbjct: 304 ATYTAVFEAFVREGKEESARELLQEMKGKG 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 5/174 (2%)
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
D L E+F +M G + + L K + EA+++ + P+VV
Sbjct: 180 DPKNLQEIFHKMRTEGFTNEAVKM---FDALSKDGRTHEALELFSQIKDKNRMPDVVAHT 236
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLK 432
++ A AG + V M GV N +TY +++ GL + +A L EM+
Sbjct: 237 AIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMG 296
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA-WEALLLHSG 485
P ++T+ + ++G A EL++++ K F P +A EAL G
Sbjct: 297 NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 350
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 139/347 (40%), Gaps = 10/347 (2%)
Query: 119 TPEFI-FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXX--XXXXXXXXXXXXXM 175
TP I + L+ YG + +A +F R+ P+
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V + LL + ++ ++ + ++I + + A K+ + M+ G + ++S
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
+V+ ++ M++ P V+ + +I+ + R +AL + +M G+
Sbjct: 291 FETSYKEVSK-----IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+P Y I+L G + +F M + PD+++Y ++ + ++ A +
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ G +PN+VT TL+ +A D+ K V ++M L G++ N ++D
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ-KGLINEALEL 461
G A +EM + C P N++ + + + EA EL
Sbjct: 466 RCKNFGSALGWYKEM-ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV-VW 252
++ L+ + R + + A I M G +I+ + E + AE +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
D +K P + MI K A + + M G+ V Y ++S E
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FE 292
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
Y ++ +++D+M + PDV +Y + I + + +EA+ + + M+ G +P
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N LL A +G + +AK V K M + +L +Y ML V +++ A + +
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
F P T+ +I + + + +E+ +K+
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 8/284 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E F +LI+A ++ + A ++L+ + + G + + ++ S +AEA +
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA--I 196
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYTIVLSG 308
+ M+ G P + + +++ V+ ++ +A + + K+ +KPD Y +++
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G+Y K ++F M+ G+ TYN + + E +I D M + +P+
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPD 313
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VV+ L+ A A +A V +EM GV Y I+LD + +A + +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
M + +P ++ ++ + A + K+I F P
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 417
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVL 306
A ++ +M + G P V +T ++ + DA IL++MK +PDV Y+ +L
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-DSMIKLGC 365
V + +D L+ EM + P+ T N+ ++G + + D+ +++ D ++ C
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
KP+V T N +L G + + ++ G+E T+ I++ K + S
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKG 453
++E M K F +ST++NII G
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVG 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 268 TDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
T+ + L+ +++ + AL + + +++ +P Y +L + G + +LFDEML
Sbjct: 92 TETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDL 385
GL P V Y + + N +D+A I+D M C+P+V T +TLL A +A
Sbjct: 152 EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML-KKCFYPRSSTFDN 444
+ KEM + + N T I+L G + +L +ML P T +
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 494
I+ G I+ +K P R + L+ G Y + +
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMS 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
+E T+ L+ L + + + A K+ + M+E+G ++ + ++++ N + +A
Sbjct: 123 KEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLID--DAFS 180
Query: 251 VWGDMRKLGFC-PGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLS 307
+ M+ C P V ++ +++ V + +D+LY +M + I P+ V IVLS
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLY--KEMDERLITPNTVTQNIVLS 238
Query: 308 GIVAEGDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
G G + +++++ +MLV PDV+T N+ ++ K+D + G +
Sbjct: 239 GYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIE 298
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
P T N L+G+ + K VM+ M TY +++ + L
Sbjct: 299 PETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELT 358
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
++M + + TF CC+ G N L
Sbjct: 359 FDQMRSEGMKADTKTF----CCLIN-GYANAGL 386
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 139/347 (40%), Gaps = 10/347 (2%)
Query: 119 TPEFI-FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXX--XXXXXXM 175
TP I + L+ YG + +A +F R+ P+
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 176 VPQILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIIS 235
V + LL + ++ ++ + ++I + + A K+ + M+ G + ++S
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 236 SLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI 295
+V+ ++ M++ P V+ + +I+ + R +AL + +M G+
Sbjct: 298 FETSYKEVSK-----IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+P Y I+L G + +F M + PD+++Y ++ + ++ A +
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ G +PN+VT TL+ +A D+ K V ++M L G++ N ++D
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 472
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ-KGLINEALEL 461
G A +EM + C P N++ + + + EA EL
Sbjct: 473 RCKNFGSALGWYKEM-ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 113/273 (41%), Gaps = 4/273 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV-VW 252
++ L+ + R + + A I M G +I+ + E + AE +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
D +K P + MI K A + + M G+ V Y ++S E
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FE 299
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
Y ++ +++D+M + PDV +Y + I + + +EA+ + + M+ G +P
Sbjct: 300 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N LL A +G + +AK V K M + +L +Y ML V +++ A + +
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
F P T+ +I + + + +E+ +K+
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 8/284 (2%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
E F +LI+A ++ + A ++L+ + + G + + ++ S +AEA +
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA--I 203
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYTIVLSG 308
+ M+ G P + + +++ V+ ++ +A + + K+ +KPD Y +++
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G+Y K ++F M+ G+ TYN + + E +I D M + +P+
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPD 320
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
VV+ L+ A A +A V +EM GV Y I+LD + +A + +
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
M + +P ++ ++ + A + K+I F P
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 424
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE--MLVLGLIPDVYTYNVY 340
A+ + +M + G VV + +L+ + + ++ +LFDE + PD +Y +
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
I C K ++A++I+ M G + ++ T+LG+L + G + +A+ + EM KG
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 401 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
+L+ Y + L K L+EEM P + +++ ++ C KG+++EA
Sbjct: 241 DLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA-- 297
Query: 461 LMKKIVAKSFAPGARAWEALLLH 483
KK+ P A + L+ H
Sbjct: 298 --KKVYEGLEQPNAATFRTLIFH 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 178 QILLKSQHMKIRIEESTF-RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSL-IIS 235
+ L++S +I+ TF LI + R D+A+K+ M D G + S +
Sbjct: 87 EALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM--DKLGTPRTVVSFNALL 144
Query: 236 SLCEQNDV-TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG 294
+ C +D+ L R P + + +I+ + A+ I+ M+ G
Sbjct: 145 AACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKG 204
Query: 295 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 354
++ ++ +T +L + G + + L+ EM+ G D YNV + K++ +
Sbjct: 205 VEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESP-ERVK 263
Query: 355 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 411
++++ M +G KP+ V+ N L+ A C G +S+AK V + GL+ + N T+R ++
Sbjct: 264 ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE--GLE--QPNAATFRTLI 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 140/368 (38%), Gaps = 49/368 (13%)
Query: 75 SFKSYSCDPTPNAYY--FLIKTLVNTSHLQDIPPVLDHLERVEKFETPEFIFVYLIRFYG 132
S + S P + Y ++ L + DI +++ + K +T F+ LIR YG
Sbjct: 55 SVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLST-LIRSYG 113
Query: 133 LADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQIL--LKSQHMKIRI 190
A A+ +F + + TP VPQ+ ++ I
Sbjct: 114 RASMFDHAMKMFEEMDKL-GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITP 172
Query: 191 EESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALV 250
++ ++ +LI + C + + A++I+ M G + + I+ SL + V AE+L
Sbjct: 173 DKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+ +M G D Y + L
Sbjct: 233 I-------------------------------------EMVNKGCDLDNTVYNVRLMNAA 255
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
E ++ EL +EM +GL PD +YN + C + + EA ++ + + +PN
Sbjct: 256 KESPE-RVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL----EQPNAA 310
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T TL+ LC G + V K+ + + T + + +GLV + +A + +
Sbjct: 311 TFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVA-RI 369
Query: 431 LKKCFYPR 438
+KK F PR
Sbjct: 370 VKKKFPPR 377
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 286 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGL 344
+ QM GI+PDV ++ G V +F +M +V P+ +TY+ I+GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 345 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
C Q + A +++ M G PN + N+L+ A +G++ A + EM G ++
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 405 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+YR ++D K + EA+ LLE + +K R S +D ++
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS-YDKLV 435
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y I + + A Y ++D++ +++L + I + YN I K K+ A+ I M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 361 I---KLGCKPNVVTCNTLLGALCEAGD--------LSKAKGVMKEMGLKGVELNLHTYRI 409
+ L C+P + T + L AL G+ + + + ++M G+E ++
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 410 MLDGLVGKAEIGEASLLLEEM--LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
++ G V + +A + +M + C P S T+D +I +C +G A EL+ ++
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDC-EPNSFTYDYLIHGLCAQGRTINARELLSEMKG 352
Query: 468 KSFAPGARAWEALL 481
K F P +++ +L+
Sbjct: 353 KGFVPNGKSYNSLV 366
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
DE+F +M GLIP+ ++GLCK V EA+++ M G P VV ++ A
Sbjct: 119 DEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
C+A + AK + ++M G+ N +Y +++ GL + +A EML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
TF ++ +C+ + +A + + K FA +A + +
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ M++ G P + M+ L K+ +A+ + M+ G P+VV YT V+
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+F +M G+ P+ ++Y V + GL N +D+A+ M++ G PNV
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
T L+ ALC + +A+ + + KG +N+ + +D
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
D+ I +MK+ G+ P+ V +L G+ +G + +LF M G IP+V Y +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
CK +K+++A +I M G PN + L+ L L A EM G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
N+ T+ ++D L + +A ++ + +K F
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
DE+F +M GLIP+ ++GLCK V EA+++ M G P VV ++ A
Sbjct: 119 DEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
C+A + AK + ++M G+ N +Y +++ GL + +A EML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
TF ++ +C+ + +A + + K FA +A + +
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
++ M++ G P + M+ L K+ +A+ + M+ G P+VV YT V+
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
+F +M G+ P+ ++Y V + GL N +D+A+ M++ G PNV
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
T L+ ALC + +A+ + + KG +N+ + +D
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
D+ I +MK+ G+ P+ V +L G+ +G + +LF M G IP+V Y +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
CK +K+++A +I M G PN + L+ L L A EM G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
N+ T+ ++D L + +A ++ + +K F
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
AL M+ G+ D Y ++L+ +V E + D +FD++ V G + V T+++ +
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVK 259
Query: 343 GLCKQNKVDEA-----------------------------------IQIVDSMIKLGCKP 367
CKQ K+DEA +++D + +G
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVN 319
Query: 368 NVVTCNTLLGALCEAGDLSKAKGVMKEMG-LKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
N + AL +AG L+ ++++ L+G EL + Y M+ L+ + + +
Sbjct: 320 MDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDI 379
Query: 427 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
L EM+ + P T + +C C+ G ++EALEL + FAP A ++ L+
Sbjct: 380 LTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 119/267 (44%), Gaps = 3/267 (1%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T +L+ C+ ++D A L ++ + G +++ +LC + A L+
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLL--D 310
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVLSGIVAE 312
+++ +G + IR L+K + L ++ +G + +V Y ++ ++ E
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKE 370
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
+ + ++ EM+V G+ P+ T N + CK VDEA+++ S ++G P ++
Sbjct: 371 NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
N L+ LC + +A V+K +G L T+ + + L K + A L+ +
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAE 490
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEAL 459
+ P+ II +C G + +AL
Sbjct: 491 RDLLPKRIAGCKIISALCDVGKVEDAL 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 13/263 (4%)
Query: 218 MIEDGFGLDGKIC----SLIISSLCEQNDVTSAE---ALVVWGDMRKLGFCPGVMDFTDM 270
+I D + G +C S+++ C+Q + AE ++ D G G++
Sbjct: 238 VIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGIL----- 292
Query: 271 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL-G 329
+ L + + +A +L+++K G Y I + ++ G + ++ L G
Sbjct: 293 VDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEG 352
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 389
+V+ YN + L K+N +D I+ M+ G PN T N L C+AG + +A
Sbjct: 353 CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEAL 412
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
+ + G +Y ++ L + +A +L+ + + + TF + +
Sbjct: 413 ELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNAL 472
Query: 450 CQKGLINEALELMKKIVAKSFAP 472
C KG + A EL+ + P
Sbjct: 473 CWKGKPDMARELVIAAAERDLLP 495
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
A+AL + D+R+ G + + MI L K + DA++ L +MK +G++P + C
Sbjct: 655 ADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIEC---- 709
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
Y V I LC + K DEA+ +V+ K G
Sbjct: 710 -------------------------------YEVNIQKLCNEEKYDEAVGLVNEFRKSGR 738
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
+ N LL ++ + +A M+ + K E+ I L G+ ++
Sbjct: 739 RITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGL--FSGRIDMEVELK 796
Query: 426 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 475
L+E+++KC YP N++ M +A E++++I + + P R
Sbjct: 797 RLDEVIEKC-YPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNER 845
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
I++ + ++ + + +L DE+ ++G + YN++I L K ++ + + L
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 364 -GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
GC+ V N+++ L + +L ++ EM ++GV N T L + E
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
A L + F P + +++ +I +C + +A +++K + + G + + L
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC-SLIISSLCEQND 242
++ +++I+E T + + L R +++ A + M+E G + +++++ LC +
Sbjct: 166 KNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGE 225
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
+T A LV + K G ++ F MI VK + +L M+++ + D+ Y
Sbjct: 226 ITRARELVEEMGLVK-GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSY 284
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+++ G + G + + L M L + Y YN+ +NG + V++ I++ M
Sbjct: 285 KVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSS 344
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
G PN T L+ LC+AG + +A + E+ + E++ Y
Sbjct: 345 RGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMY--------------- 389
Query: 423 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 480
S L EE C+ + G+I+++LE++ +++ F PGA E L
Sbjct: 390 -STLSEE----CY---------------RVGMIDKSLEVVAEMIRDGFIPGATICERL 427
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEM 325
F MI + + + + MK + +K D T+ L + D ++L + F M
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNL-KRCDQMELARDFFSLM 200
Query: 326 LVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGALCEAG 383
+ G+ + VY+ V + LC ++ A ++V+ M + G K N+VT +++G +
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRW 260
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
D + V+K M + V L+L +Y++++DG ++ EA L+ M K S ++
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
I+ + GL+ + +EL ++ ++ P + L+
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 13/274 (4%)
Query: 187 KIRIEESTF-RVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTS 245
+++IE++ F +L++ L + ++ + M+ G +D S + S V
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
E L G + K GF ++ F +K +R A + ++M + DV+ + +
Sbjct: 214 GEQL--HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE----RDVISWNSI 267
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
++G V+ G K +F +MLV G+ D+ T V + C +++ + V S+ C
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATI-VSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 366 -KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
CNTLL + GDL AK V +EM + V +Y M+ G + GEA
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAV 382
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 458
L EEM ++ P T ++ C + L++E
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 188 IRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAE 247
I+ +E T+R +I C + + A K+ N M+++GF +D + I+ +L ++N A
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 248 ALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS 307
+ ++ G G + MI +L K R A + ++M++ G+ D + + ++
Sbjct: 271 KVFYVMVSKRGGDLDGGF-YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIY 329
Query: 308 GIVAEGDYVKLDELFDEMLVLGLI-----PDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
G++ + V+ GL+ PD+ Y+ I GL K + EA ++ MI+
Sbjct: 330 GLLVKRRVVE---------AYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQ 380
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 422
GC+P + T LL +G + G KG + ++ I + G++ + E
Sbjct: 381 RGCEPIMHTYLMLL------------QGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRLE 428
Query: 423 ASLLLEEMLKK 433
+ +E LK+
Sbjct: 429 TTKYIERTLKR 439
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 274 LVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 332
++ R MD + L Q + + G+ D + IVL + + + K F M G +
Sbjct: 121 IIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNGFGYLY 179
Query: 333 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 392
+V T N + LCK+ V+EA + V +K KP+ +T T++ C+ GDL +A +
Sbjct: 180 NVETMNRGVETLCKEKLVEEA-KFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN-----IIC 447
M +G ++++ + +++ L+ K + EAS + M+ K R D +I
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSK----RGGDLDGGFYRVMID 294
Query: 448 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+C+ G I+ A ++ ++ + W +L+
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLI 328
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 326
F +I K R DA + ++M + G+ D V + ++ G + + L +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 327 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 386
G+ PD TYN+ ++ ++ A++ + K+G P+ VT +L LC+ ++
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 387 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 446
+ + V+ EM + ++ H+ +++ V + + +A L E C S+T +I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS-STTLAAVI 486
Query: 447 CCMCQKGLINEA 458
+KGL EA
Sbjct: 487 DVYAEKGLWVEA 498
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 138/375 (36%), Gaps = 73/375 (19%)
Query: 124 FVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKS 183
F LI YG A R+ DA +LF +LKS
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSE---------------------------------MLKS 334
Query: 184 QHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
+ I+ TF +I + A +L M E G D K ++++S + D+
Sbjct: 335 ---GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDI 391
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ AL + +RK+G P + ++ L + + + ++ +M ++ I+ D
Sbjct: 392 EA--ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Query: 304 IVLSGIVAEGDYVKLDELFDEM--------LVLGLIPDVYT------------------- 336
+++ V EG V+ LF+ L + DVY
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMS 509
Query: 337 --------YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 388
YNV I K ++A+ + M G P+ T N+L L + +A
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 389 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 448
+ ++ EM G + TY M+ V + +A L E M K P + ++I
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 449 MCQKGLINEALELMK 463
+ G++ EA++ +
Sbjct: 630 FAESGMVEEAIQYFR 644
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+AL ++ M+ G P + + + L + +A IL +M G KP Y ++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ----------- 355
+ V G +L++ M G+ P+ Y ING + V+EAIQ
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 356 ----IVDSMI----KLGC----------------KPNVVTCNTLLGALCEAGDLSKAKGV 391
++ S+I K+GC P+V N++L + G +S+A+ +
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
+ KG ++ ++ M+ G + EA + EEM + ++F+ ++ C
Sbjct: 713 FNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 452 KGLINEALELMKKIVAK 468
G ++E EL +++ +
Sbjct: 772 DGQLSECCELFHEMLVE 788
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 156/389 (40%), Gaps = 26/389 (6%)
Query: 91 LIKTLVNTSHLQDIPPVLDHLERVEKFETPEF-IFVYLIRFYGLADRIQDAVDLFFRIPR 149
+I T HL + +L +E EK +P+ + L+ + A I+ A++ + +I +
Sbjct: 346 MIHTCGTHGHLSEAESLLKKME--EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Query: 150 FRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLKSQHMKIRIEESTFRVLISALCRIRRVD 209
P V ++ + IRI+E + V++ V+
Sbjct: 404 VGLFPDTVTHRAVLHILCQRKMVAE-VEAVIAEMDRNSIRIDEHSVPVIMQMY-----VN 457
Query: 210 YAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEAL------VVWGDMRKLGFCPG 263
+ + + + F LD C L ++L DV + + L V +G G
Sbjct: 458 EGLVVQAKALFERFQLD---CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 323
V+++ MI+ K + AL + MK G PD Y + + + +
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
EML G P TY I + + +A+ + ++M K G KPN V +L+ E+G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIG---EASLLLEEMLKKCFYPRS 439
+ +A + M GV+ N I+L L+ +++G EA + ++M P
Sbjct: 635 MVEEAIQYFRMMEEHGVQSN----HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 440 STFDNIICCMCQKGLINEALELMKKIVAK 468
+ ++++ G+++EA + + K
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREK 719
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
T+N I+ K ++++A + M+K G + VT NT++ G LS+A+ ++K+M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
KG+ + TY I+L +I A ++ K +P + T ++ +CQ+ ++
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 456 NE 457
E
Sbjct: 427 AE 428
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 133/307 (43%), Gaps = 24/307 (7%)
Query: 192 ESTFRVLISALCR--------IRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
E RVL+ +L ++ +D VK++ C C L+ L + +
Sbjct: 64 ERENRVLVRSLMSRISDREPLVKTLDKYVKVVRC----------DHCFLLFEELGKSDKW 113
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ W ++ + P ++ +I + K+ + A+++ ++MK G +PD Y
Sbjct: 114 LQCLEVFRWMQKQRW-YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYN 172
Query: 304 IVLSGIVAEGDYVKLDE----LFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+++ + D K E D+M + P+V TYN+ + + KVD+ +
Sbjct: 173 ALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFK 232
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
+ P+V T N ++ A + G + + + V+ M + ++ T+ +++D K
Sbjct: 233 DLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQ 292
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
E + + +++ P TF+++I + +I++A + KK+ ++ P +E
Sbjct: 293 EFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYE 352
Query: 479 ALLLHSG 485
+++ G
Sbjct: 353 CMIMMYG 359
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 226 DGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALY 285
D + S +IS + ++ A + ++ +M+ G P + +I + AL
Sbjct: 132 DNGVYSKLISVMGKKGQTRMA--MWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 286 ----ILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 340
L++MK + +P+VV Y I+L G +++ LF ++ + + PDVYT+N
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
++ K + E ++ M CKP+++T N L+ + + + K + K +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 401 ELNLHTYRIMLDGLVGKAE-IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+ L T+ M+ GKA I +A + ++M + P T++ +I G ++ A
Sbjct: 310 KPTLPTFNSMIINY-GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 460 ELMKKI 465
E+ +++
Sbjct: 369 EIFEEV 374
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 123/305 (40%), Gaps = 7/305 (2%)
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDG-----KICSLIISSLCEQNDV 243
R + S + LI+A R A++ + ++ G++ ++++ + + V
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
AL DM + P V F ++ K + +L +M+ + KPD++ +
Sbjct: 225 DQVNALFKDLDMSPVS--PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+++ + ++ K+++ F ++ P + T+N I K +D+A + M +
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
P+ +T ++ G +S+A+ + +E+G L T ML+ EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
L +P +ST+ + + + + LMKK+ P R + L
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
Query: 484 SGSDL 488
GS L
Sbjct: 463 FGSRL 467
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 181 LKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQ 240
+K++ I + + L+ A C +V+ A ++ + + G ++ ++ ++S +
Sbjct: 598 MKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKS 657
Query: 241 NDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVV 300
D A ++ DM++ P + F+ +I + +A IL K GI+ +
Sbjct: 658 GDWDFA--CSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTI 715
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
Y+ ++ D+ K EL++++ + L P + T N I LC+ N++ +A++ +D +
Sbjct: 716 SYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEI 775
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
LG KPN +T + L+ A D + ++ + GV NL
Sbjct: 776 KTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 119/294 (40%), Gaps = 8/294 (2%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
+ LIS+ + +VD ++ + M G + +I V A+A +G
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQV--AKAFGAYGI 562
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG--IKPDVVCYTIVLSGIVAE 312
+R P + F +I + A +L +MK + I PD + ++
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 313 GDYVKLDELFDEMLVLGL--IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G + E++ + G+ P+VYT + +N K D A I M + P+ V
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYT--IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
+ L+ A L +A G++++ +G+ L +Y ++ + +A L E++
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 484
P ST + +I +C+ + +A+E + +I P + L+L S
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLAS 794
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 3/231 (1%)
Query: 233 IISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ 292
+I+ L E N T A V G + + F + D++ +I KE D IL +M Q
Sbjct: 355 LINQLREGN--THAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQ 412
Query: 293 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 352
+GI PD++ T ++ G++ + E F+ + GL PD Y I G K
Sbjct: 413 NGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKL 472
Query: 353 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIML 411
+++ M K + LL A + GD + A G+ M L+ Y + +
Sbjct: 473 GERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFV 532
Query: 412 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ ++ +A +EM K P N++ + +++AL L+
Sbjct: 533 EAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 119/319 (37%), Gaps = 38/319 (11%)
Query: 193 STFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
S + LI + ++ +IL M ++G D + ++ + + A +
Sbjct: 385 SDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFE--RATEAF 442
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+++ G P + MI V + ++ +M+ +K Y +L
Sbjct: 443 ENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQM 502
Query: 313 GDYVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD + M P Y++++ K +VD+A D M KLG KP+
Sbjct: 503 GDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKC 562
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD-----GLVGKAE------- 419
L+ A L KA ++ ++ G+E+ + TY +++D GL+ +AE
Sbjct: 563 IANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKIS 622
Query: 420 -IGEASLLLEEMLKKCFYPR----------------------SSTFDNIICCMCQKGLIN 456
+GEA ++ C Y + FD +I + + G
Sbjct: 623 QLGEAPPFELQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEK 682
Query: 457 EALELMKKIVAKSFAPGAR 475
+A + K + A+ F P R
Sbjct: 683 DARRMYKYMEARKFLPSQR 701
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 133/307 (43%), Gaps = 24/307 (7%)
Query: 192 ESTFRVLISALCR--------IRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDV 243
E RVL+ +L ++ +D VK++ C C L+ L + +
Sbjct: 64 ERENRVLVRSLMSRISDREPLVKTLDKYVKVVRC----------DHCFLLFEELGKSDKW 113
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
+ W ++ + P ++ +I + K+ + A+++ ++MK G +PD Y
Sbjct: 114 LQCLEVFRWMQKQRW-YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYN 172
Query: 304 IVLSGIVAEGDYVKLDE----LFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 358
+++ + D K E D+M + P+V TYN+ + + KVD+ +
Sbjct: 173 ALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFK 232
Query: 359 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 418
+ P+V T N ++ A + G + + + V+ M + ++ T+ +++D K
Sbjct: 233 DLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQ 292
Query: 419 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 478
E + + +++ P TF+++I + +I++A + KK+ ++ P +E
Sbjct: 293 EFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYE 352
Query: 479 ALLLHSG 485
+++ G
Sbjct: 353 CMIMMYG 359
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 226 DGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALY 285
D + S +IS + ++ A + ++ +M+ G P + +I + AL
Sbjct: 132 DNGVYSKLISVMGKKGQTRMA--MWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 286 ----ILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 340
L++MK + +P+VV Y I+L G +++ LF ++ + + PDVYT+N
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 341 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
++ K + E ++ M CKP+++T N L+ + + + K + K +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 401 ELNLHTYRIMLDGLVGKAE-IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 459
+ L T+ M+ GKA I +A + ++M + P T++ +I G ++ A
Sbjct: 310 KPTLPTFNSMIINY-GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 460 ELMKKI 465
E+ +++
Sbjct: 369 EIFEEV 374
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 123/305 (40%), Gaps = 7/305 (2%)
Query: 189 RIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDG-----KICSLIISSLCEQNDV 243
R + S + LI+A R A++ + ++ G++ ++++ + + V
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224
Query: 244 TSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT 303
AL DM + P V F ++ K + +L +M+ + KPD++ +
Sbjct: 225 DQVNALFKDLDMSPVS--PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 304 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 363
+++ + ++ K+++ F ++ P + T+N I K +D+A + M +
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
P+ +T ++ G +S+A+ + +E+G L T ML+ EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 483
L +P +ST+ + + + + LMKK+ P R + L
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
Query: 484 SGSDL 488
GS L
Sbjct: 463 FGSRL 467
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
Q+ + + DVV Y +++ G+V + V+ ELFD M + D+ ++N I+G + N
Sbjct: 173 QLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP----LRDLVSWNSLISGYAQMN 228
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK--------------- 393
EAI++ D M+ LG KP+ V + L A ++GD K K +
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 394 ------------EMGLKGVEL----NLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFY 436
+ ++ EL L T+ M+ GL GE ++ +M+
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN-GELTVDYFRKMVSSGIK 347
Query: 437 PRSSTFDNIICCMCQKGLINEALELMKKI 465
P TF +++ GL++EA L ++
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 262 PGVMDFTDMIRF-LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE--GDYVKL 318
P F +IR + E + + +M++ + PD + V A+ GD +
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLV 136
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
L + L GL+ D++T N I +D A+Q+ D + +VVT N L+
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE----NPQRDVVTYNVLIDG 192
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
L +A ++ +A+ + M L+ +L ++ ++ G EA L +EM+ P
Sbjct: 193 LVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 439 SSTFDNIICCMCQKG 453
+ + + Q G
Sbjct: 249 NVAIVSTLSACAQSG 263
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD---------YVKLDELF-DEMLVLGLI 331
+A+ + ++M G+KPD V LS GD Y K LF D L GL+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 332 ---------------------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
++T+N I GL + + M+ G KP+ V
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAE-IGEASLLLE 428
T ++L +G + +A+ + +M L V + Y M D L+G+A I EA+ ++E
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMAD-LLGRAGLIEEAAEMIE 410
Query: 429 EMLK 432
+M K
Sbjct: 411 QMPK 414
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 286 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
+LN+MK+ I P + Y +++ G+ K+ + E+ ++PD YTYNV++ L
Sbjct: 145 LLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALA 204
Query: 346 KQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
N + ++++ M + G P+ T + + +AG KA+ ++E+ +K + +
Sbjct: 205 ATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDF 264
Query: 405 HTYR--IMLDGLVGK---------------------AEIGEASLLLE-------EMLKKC 434
Y+ I L G +GK A + +L++ E L K
Sbjct: 265 TAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKE 324
Query: 435 FYPRSSTFD----NI-ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ ST+D N+ I Q+GLI +A EL +K + A+ WE +
Sbjct: 325 WQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFM 376
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 234 ISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD 293
IS CE+ A ++ M G P + +++ L + L +M++
Sbjct: 517 ISKSCEK-------ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRET 569
Query: 294 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 353
G D + Y V+S V G +E++ EM+ + PDV Y V IN V +A
Sbjct: 570 GYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQA 629
Query: 354 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL---KGVELNLHTYRIM 410
+ V++M + G N V N+L+ + G L +A+ + +++ K +++T M
Sbjct: 630 MSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCM 689
Query: 411 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
++ ++ + +A + + M K+ TF ++C + G EA ++ K++
Sbjct: 690 INLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 7/221 (3%)
Query: 251 VWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
+W +M + G P + +I K + AL L +M + G++PD V IVL
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 311 AEGDYVKLDELFDEMLVLGLIPDV------YTYNVYINGLCKQNKVDEAIQIVDSMIKLG 364
++ K +E F + D YTYN I+ K ++ EA + M++ G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 424
P VT NT++ G L + +MK M L + TY I++ +I A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAP-DTRTYNILISLHTKNNDIERAG 387
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
+EM P ++ ++ + ++ EA L+ ++
Sbjct: 388 AYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 215 LNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFL 274
L M E G+ D +ISS + + AE V+ +M + P V+ + +I
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEE--VYKEMVEYNIEPDVVVYGVLINAF 620
Query: 275 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL---GLI 331
A+ + MK+ GI + V Y ++ G + + ++ ++L
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 391
PDVYT N IN +++ V +A I DSM + G + N T +L + G +A +
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 392 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 451
K+M + + +Y +L EA +EM+ P STF ++ + +
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 452 KGLINEALELMKKIVAKSFAPGARAWEALL 481
G+ +A+ +++I K G W + L
Sbjct: 800 LGMSKKAVRKIEEIRKKEIKRGLELWISTL 829
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/384 (17%), Positives = 146/384 (38%), Gaps = 49/384 (12%)
Query: 122 FIFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILL 181
+ + +I YG + +I++A + F R+ PT + L+
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTS--LM 356
Query: 182 KSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQN 241
K+ + + T+ +LIS + ++ A M +DG D ++ + ++
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 242 DVTSAEALV---------------------------------------VWGDMRKLGFCP 262
V AE L+ V G+M G+
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSA 476
Query: 263 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 322
+ + + +L + ER ++I Q K V+ Y +++ K ELF
Sbjct: 477 NIDAYGER-GYLSEAER----VFICCQEVN---KRTVIEYNVMIKAYGISKSCEKACELF 528
Query: 323 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 382
+ M+ G+ PD TYN + L + + ++ M + G + + ++ + +
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 383 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 442
G L+ A+ V KEM +E ++ Y ++++ + +A +E M + S +
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIY 648
Query: 443 DNIICCMCQKGLINEALELMKKIV 466
+++I + G ++EA + +K++
Sbjct: 649 NSLIKLYTKVGYLDEAEAIYRKLL 672
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 18/247 (7%)
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-QDGIK 296
CEQ ++A+ V+G++ K + + MI LV ER +A+ + + M+ GIK
Sbjct: 252 CEQ----LSDAMRVFGELEK----KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
PD T VLS + G + + +L G+ D + ++ K ++ A++I
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ + NV T N LLG L G ++ +EM G + NL T+ L+
Sbjct: 364 FNGIRS----KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 417 KAEIGEASLLLEEMLKKCF--YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
+ E +M + + +P+ + +I +C+ GL++EALEL+K + K P
Sbjct: 420 TGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK---PDV 476
Query: 475 RAWEALL 481
R A+L
Sbjct: 477 RICGAIL 483
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
GD ++FD+M D+ +N ING + K +EA+ + M G KP+ T
Sbjct: 170 GDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+LL A + G L+ K V M G+ NLH+ ++LD + EA L +EM+
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMK 463
K S ++ ++I + G EA+EL K
Sbjct: 286 K----NSVSWTSLIVGLAVNGFGKEAIELFK 312
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 262 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 321
P V+ + ++ V+ ++ A ++L Q+KQ G KP V Y +++ ++A Y + E
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 322 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
F +M IP+ Y V +N L K+ K DEA+ V+ M G + L LC
Sbjct: 651 FRKMQKSS-IPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 382 AGDLSKAKGVMKEMG---LKGVELNLH-------------------------TYRIMLDG 413
AG ++ ++ + LK +E ++ TY ++
Sbjct: 710 AGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQA 769
Query: 414 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
V I A+ + ++M K C P T + ++ Q GL EA EL +K+
Sbjct: 770 CVDSGNIKNAAYIFDQMKKVC-SPNLVTCNIMLKAYLQGGLFEEARELFQKM 820
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCY-----TIVLSGIVAEGDYV---- 316
+T + L K R ++AL + + M Q PD+V Y T+ +G + E YV
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 317 ------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
K E L PDV YN +N ++ + + A ++ + + G KP+ V
Sbjct: 570 RSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPV 629
Query: 371 TCNTLLGAL--CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
T ++ + CE +L ++M + N YR++++ L + + EA +E
Sbjct: 630 TYGLIMEVMLACEKYNL--VHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVE 686
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+M + ++ + ++ C+C G NE L ++
Sbjct: 687 DMESRGIVGSAALYYDLARCLCSAGRCNEGLNMV 720
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIK 296
C+Q D +A +++ M G P + +T +I K E A L MK K
Sbjct: 157 CKQPD----QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCK 212
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
PDV +T+++S G + + + EM LG+ TYN I+G K +E +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 357 VDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
+ MI+ G P+V T N+++G+ ++ K + L GV+ ++ T+ I++
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF- 331
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSS-TFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 474
GKA + + + + ++K F+ ++ T++ +I + G I + ++ +K+ + P +
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 475 RAWEALL 481
+ +L+
Sbjct: 392 ITYCSLV 398
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 7/277 (2%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
TF VLIS C++ R D I+ M G G + II + E+ V
Sbjct: 217 TFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMES--VLA 274
Query: 254 DMRKLG-FCPGVMDFTDMIRFLV--KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV 310
DM + G P V +I + R M++ Y Q+ G++PD+ + I++
Sbjct: 275 DMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM--GVQPDITTFNILILSFG 332
Query: 311 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 370
G Y K+ + D M TYN+ I K ++++ + M G KPN +
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 371 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
T +L+ A +AG + K V++++ V L+ + +++ ++ L +M
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 431 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 467
++ P TF +I G+ + EL K++++
Sbjct: 453 EERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 275 VKEERGMDALYILNQM-KQDGIKPDVVCYTIVLS--GIVAEGDYVKLDELFDEMLVLGLI 331
+KE R AL I N + KQ +P YT + G + D L LF+ ML GL
Sbjct: 119 IKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASL--LFEVMLSEGLK 176
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKG 390
P + Y I+ K +D+A ++ M + CKP+V T L+ C+ G K
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
++ EM GV + TY ++DG E +L +M++
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIE 278
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 202 LCRIRRVDYAVKIL--NCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG 259
L RI R D AVK + E L K + ++N SA L ++ +RK
Sbjct: 81 LSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSA--LKIFNLLRKQH 138
Query: 260 -FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 318
+ P +T + + L ++ A + M +G+KP + YT ++S G L
Sbjct: 139 WYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIS---VYGKSELL 195
Query: 319 DELFDEMLVLGLI----PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
D+ F + + + PDV+T+ V I+ CK + D IV M LG + VT NT
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNT 255
Query: 375 LLGALCEAGDLSKAKGVMKEM 395
++ +AG + + V+ +M
Sbjct: 256 IIDGYGKAGMFEEMESVLADM 276
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 211 AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDM 270
A+K+ CMI G + ++ S C ++ E + G + KLG + T +
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKS-CAKSKAFK-EGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 271 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 330
I V+ R DA + ++ DVV YT ++ G + G +LFDE+ V
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIPV--- 228
Query: 331 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 390
DV ++N I+G + EA+++ M+K +P+ T T++ A ++G + +
Sbjct: 229 -KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 391 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 450
V + G NL ++D E+ A L E + Y +++ +I
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YKDVISWNTLIGGYT 343
Query: 451 QKGLINEALELMKKIVAKSFAP 472
L EAL L ++++ P
Sbjct: 344 HMNLYKEALLLFQEMLRSGETP 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+P+++ + + G D V +L+ M+ LGL+P+ YT+ + K E Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 415
I ++KLGC ++ +L+ + G L A V K ++ +Y ++ G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD----KSPHRDVVSYTALIKGYA 211
Query: 416 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 472
+ I A L +E+ K +++ +I + G EALEL K ++ + P
Sbjct: 212 SRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 313 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 372
GD ++FD+M D+ +N ING + K +EA+ + M G KP+ T
Sbjct: 37 GDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 373 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
+LL A + G L+ K V M G+ NLH+ ++LD + EA L +EM+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 433 KCFYPRSSTFDNIICCMCQKGLINEALELMK 463
K S ++ ++I + G EA+EL K
Sbjct: 153 K----NSVSWTSLIVGLAVNGFGKEAIELFK 179
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 37/257 (14%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
A+A V+ MR+ + ++ MI +E R + + M +DG+ PD + +
Sbjct: 132 ADARKVFDSMRE----RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKI 187
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIP-------------------------------DV 334
L G GD + ++ LG+ DV
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 335 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 394
+N + C+ K +EA+++V M K G P +VT N L+G + G A +M++
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQK 307
Query: 395 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST-FDNIICCMCQKG 453
M G+ ++ T+ M+ GL+ +A + +M P + T + C C K
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK- 366
Query: 454 LINEALELMKKIVAKSF 470
+IN+ E+ V F
Sbjct: 367 VINQGSEVHSIAVKMGF 383
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 132/346 (38%), Gaps = 64/346 (18%)
Query: 201 ALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGF 260
A C+ + + AV+++ M ++G +++I + +A L+ M G
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ--KMETFGI 313
Query: 261 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG-----IVAEGD- 314
V +T MI L+ AL + +M G+ P+ V +S ++ +G
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 315 -----------------------YVKLDELFDEMLVLGLIP--DVYTYNVYINGLCKQNK 349
Y K +L D V + DVYT+N I G C+
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 350 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYR 408
+A ++ M +PN++T NT++ + GD +A + + M G V+ N T+
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF----------------DNIICCMCQK 452
+++ G + + EA L +M F P S T I C+ ++
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 453 GLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGL 498
L +A+ +K + ++A D+ YS T F G+
Sbjct: 554 NL--DAIHAVKNALTDTYAKSG------------DIEYSRTIFLGM 585
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 136/379 (35%), Gaps = 100/379 (26%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWG 253
T+ +I A R R K+ M++DG D + I+ DV + + V+
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK--VIHS 205
Query: 254 DMRKLGFCP---------------GVMDF-TDMIRFLVKEE---------------RGMD 282
+ KLG G +DF T R + + + + +
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 283 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 342
A+ ++ +M+++GI P +V + I++ G G +L +M G+ DV+T+ I+
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 343 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTC------------------------------ 372
GL +A+ + M G PN VT
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 373 -----NTLLGALCEAGDLSKAKGVMKEMGLKGV--------------------------- 400
N+L+ + G L A+ V + K V
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 401 ELNLH----TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR-SSTFDNIICCMCQKGLI 455
+ NL T+ M+ G + + GEA L + M K R ++T++ II Q G
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 456 NEALELMKKIVAKSFAPGA 474
+EALEL +K+ F P +
Sbjct: 506 DEALELFRKMQFSRFMPNS 524
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 151/382 (39%), Gaps = 74/382 (19%)
Query: 175 MVPQILLKSQHMKIRIEESTFRVLISALCRIRRVDY------------------------ 210
+VP +L S H IR+ +++F L+ A + VD
Sbjct: 471 VVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLI 530
Query: 211 -----------AVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG 259
AVKI N +E ++ I S +I + + AE L + +++ G
Sbjct: 531 CSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYL--NLKSSG 588
Query: 260 FCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDV------------------- 299
+ F+ ++R VK +A +L M +Q I PDV
Sbjct: 589 VVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKL 648
Query: 300 --VCYTIVLSGIVAEGDY-----------VKLDEL---FDEMLVLGLIPDVYTYNVYING 343
+ Y I SGI + + LDEL F+EM+ G P+ T+NV ++
Sbjct: 649 QHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDV 708
Query: 344 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 403
K K+ + + + + K +V++ NT++ A + D + +K M G ++
Sbjct: 709 YGKA-KLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVS 767
Query: 404 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 463
L Y +LD ++ + +L+ M K P T++ +I ++G I+E +++K
Sbjct: 768 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 827
Query: 464 KIVAKSFAPGARAWEALLLHSG 485
++ P ++ L+ G
Sbjct: 828 ELKESGLGPDLCSYNTLIKAYG 849
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 254 DMRKLGFCPGVMDFTDMIRFLVKEE--RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+M + GF P + F ++ K + + ++ L++L K+ G+ DV+ Y +++
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL--AKRHGV-VDVISYNTIIAAYGK 745
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
DY + M G + YN ++ K ++++ I+ M K P+ T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 372 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 431
N ++ E G + + V+KE+ G+ +L +Y ++ + EA L++EM
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 432 KKCFYPRSSTFDNIICCMCQKGLINEALE 460
+ P T+ N++ + + EA++
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 346
+ M+ DG + Y +L + K + M PD YTYN+ IN +
Sbjct: 756 IKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
Q +DE ++ + + G P++ + NTL+ A G + +A G++KEM + + + T
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 407 YRIMLDGLVGKAEIGEA---SLLLEEM 430
Y ++ L E EA SL +++M
Sbjct: 876 YTNLVTALRRNDEFLEAIKWSLWMKQM 902
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 289 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 348
+M + G P+ V + ++L + K++ELF G++ DV +YN I K
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNK 747
Query: 349 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 408
+ +M G ++ NTLL A + + K + ++K M + +TY
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 409 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
IM++ + I E + +L+E+ + P +++ +I G++ EA+ L+K++ +
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 469 SFAP 472
+ P
Sbjct: 868 NIIP 871
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 112/276 (40%), Gaps = 44/276 (15%)
Query: 192 ESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVV 251
ES + +I+ R+R D A ++++ M +D L + +++++ +Q + AE+++V
Sbjct: 279 ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILV 338
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
M+ G P+++ Y +++G
Sbjct: 339 -------------------------------------SMEAAGFSPNIIAYNTLITGY-- 359
Query: 312 EGDYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
G K++ LF + +GL PD +Y I G + + +EA + + G KPN
Sbjct: 360 -GKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Query: 369 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 428
TL+ + GD A +++M G + + I+L +I +L+
Sbjct: 419 SFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLK 477
Query: 429 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 464
++F +++ + G++++ L L+++
Sbjct: 478 GSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 42/275 (15%)
Query: 195 FRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGD 254
F +I A + V A K + M+E FG+ + ++ + Q + EA +
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLE--FGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 255 MRKLGF-CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 313
MRK G C ++ MI + A +++ MKQD ++
Sbjct: 271 MRKFGIVCESA--YSSMITIYTRLRLYDKAEEVIDLMKQDRVR----------------- 311
Query: 314 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
+KL+ V +N +Q K++ A I+ SM G PN++ N
Sbjct: 312 --LKLENWL----------------VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ + + A+G+ + G+E + +YR M++G G+A+ E + + LK+
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW-GRADNYEEAKHYYQELKR 412
Query: 434 CFY-PRSSTFDNIICCMCQKGLINEALELMKKIVA 467
C Y P S +I + G + A++ ++ +
Sbjct: 413 CGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 282 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 341
DAL + ++M K D + +++ G + G Y++ + + M+ G+ D +TY I
Sbjct: 82 DALQLFDEMN----KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVI 137
Query: 342 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 401
+ + ++E +I +IKLG +V CN+L+ + G A+ V +EM E
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP----E 193
Query: 402 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP-RSSTFDNIICC 448
++ ++ M+ G + + + +L +EMLK F P R ST + C
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 125/309 (40%), Gaps = 37/309 (11%)
Query: 186 MKIRIEESTFRVLISAL---CRIRRVDYAVKILNCMIEDG----------FGLDGKICS- 231
++ RIE V+ S L + V YA +I N MI+ + +G++
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 232 -LIISSLCEQN----DVTSA----------EALVVWGDMRKLGFCPGVMDFTDMIRFLVK 276
L + EQN DV ++ E + G + GF P ++ T +I +
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 277 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 336
+ A I ++M + +V+ + +++ V G ELF E+ L+PD T
Sbjct: 378 CGQLKSAEVIFDRMAE----KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 337 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 396
+ + + E +I ++K N + N+L+ GDL A+ +
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 397 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 456
LK V ++ ++ IM + G I + L EM+ P STF +++ G+++
Sbjct: 494 LKDV-VSWNSI-IMAYAVHGFGRI--SVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 457 EALELMKKI 465
E E + +
Sbjct: 550 EGWEYFESM 558
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 270 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 329
MI KEE+ AL I M + G+KP++V +++ + G + +++ + LG
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 330 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGALCEAGDLSK 387
PD YT+N + L K N+ ++ +Q+ D MI+ C N NT + + + G K
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFD-MIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 388 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 447
A ++ EM G+ ++ +Y +++ + A L+ E M ++ P + T+ +++
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 448 CMCQKGLINEALELMKKI 465
L +E +++KK+
Sbjct: 469 SCIWGSLWDEVEDILKKV 486
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 336 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 395
T + + L + +KV A+++ DSM LG +PN CN+ L L GD+ KA V + M
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM 168
Query: 396 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 455
K + HTY +ML + A + E+ ++ R S FD + L
Sbjct: 169 R-KKENVTGHTYSLMLKAVAEVKGCESALRMFRELERE--PKRRSCFDVV--------LY 217
Query: 456 NEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYS 491
N A+ L +I + R W + H G+++TYS
Sbjct: 218 NTAISLCGRI--NNVYETERIWRVMKGDGHIGTEITYS 253
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 297 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 356
PD V +T ++SG + G+ + +F +M ++G++PD +T +++ QI
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 357 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 416
+ +KL C + +L+ + G + A + K + + +N+ + ML GL
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM----MNITAWNAMLVGLAQ 696
Query: 417 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
E E L ++M P TF ++ GL++EA + M+ +
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 46/248 (18%)
Query: 219 IEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGF----CPGVMDFTDMIRFL 274
I+ G+ LD + S I+ + D+++A+ F P + +T MI
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQ----------FAFDSIPVPDDVAWTTMISGC 593
Query: 275 VKEERGMDALYILNQMKQDGIKPD----------VVCYTIVLSGIVAEGDYVKLD----- 319
++ A ++ +QM+ G+ PD C T + G + +KL+
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 320 ----ELFDEMLVLGLIPDVY------------TYNVYINGLCKQNKVDEAIQIVDSMIKL 363
L D G I D Y +N + GL + + E +Q+ M L
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 364 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGE 422
G KP+ VT +L A +G +S+A M+ M G G++ + Y + D L + +
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 423 ASLLLEEM 430
A L+E M
Sbjct: 774 AENLIESM 781
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 35/284 (12%)
Query: 181 LKSQHMKIRIEES--TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLC 238
KSQ + +ES + ++ S+L + R A+++L M + G ++ S++I +
Sbjct: 235 FKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFA 294
Query: 239 EQNDVTSAEALVVWGDMRKLGFCP-------------GVMDFT-DMIRFLVKEE------ 278
E +V E L +KL P G M+ T +++ + K E
Sbjct: 295 EAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDC 354
Query: 279 ------------RGM-DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
RG +A+ + ++ + V Y I ++ Y K + LFDEM
Sbjct: 355 ILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEM 414
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
+ G V Y+ ++ K ++ +A++++ M + GCKPN+ N+L+ A DL
Sbjct: 415 VKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDL 474
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 429
+A+ + KEM V + +Y M+ E+ L +E
Sbjct: 475 RRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTS--AEALVV 251
T+ + I+A CR+ + + A + + M++ GF C + S++ + T ++A+ +
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDK----CVVAYSNIMDMYGKTRRLSDAVRL 445
Query: 252 WGDMRKLGFCPGVMDFTDMIRFLVKEERGMD---ALYILNQMKQDGIKPDVVCYTIVLSG 308
M++ G P + + +I R MD A I +MK+ + PD V YT ++S
Sbjct: 446 MAKMKQRGCKPNIWIYNSLIDM---HGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
Query: 309 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 368
+ + EL+ E + D + + K +++DE ++++ M G + +
Sbjct: 503 YNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLD 562
Query: 369 VVTCNTLLGALCEAG 383
++ L AL +AG
Sbjct: 563 ARLYSSALNALRDAG 577
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 45/218 (20%)
Query: 293 DGI-KPDVVCYTIVLSGIVAEGDYVKLDELFDEM-----------LVLGLI--------- 331
DG+ + DVV +T V++G + GD + ELFD + +V G +
Sbjct: 70 DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAE 129
Query: 332 --------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
+V ++N I+G + ++D+A+++ D M + N+V+ N+++ AL + G
Sbjct: 130 MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRG 185
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 443
+ +A + + M + V ++ M+DGL ++ EA L + M ++ +++
Sbjct: 186 RIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWN 237
Query: 444 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+I Q I+EA +L + + + FA +W ++
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMI 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 29/272 (10%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
LI LC++ ++ A K+ + + E D + +I+ + D+ A L D RK
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 258 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 317
V+ +T M+ ++ ++ L I + Q+ + +VV + ++ G G K
Sbjct: 108 -----NVVTWTAMVSGYLRSKQ----LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK 158
Query: 318 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 377
ELFDEM ++ ++N + L ++ ++DEA+ + + M + +VV+ ++
Sbjct: 159 ALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVD 210
Query: 378 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 437
L + G + +A+ + M E N+ ++ M+ G I EA L + M ++ F
Sbjct: 211 GLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF-- 264
Query: 438 RSSTFDNIICCMCQKGLINEALELMKKIVAKS 469
++++ +I + +N+A L ++ K+
Sbjct: 265 --ASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 323
++ + M++ LV+ R +A+ + +M + DVV +T ++ G+ G + LFD
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 324 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 383
M +I ++N I G + N++DEA D + ++ + + + NT++
Sbjct: 227 CMPERNII----SWNAMITGYAQNNRIDEA----DQLFQVMPERDFASWNTMITGFIRNR 278
Query: 384 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK-CFYPRSSTF 442
+++KA G+ M E N+ ++ M+ G V E EA + +ML+ P T+
Sbjct: 279 EMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 443 DNII-CCMCQKGLI 455
+I+ C GL+
Sbjct: 335 VSILSACSDLAGLV 348
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 267 FTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 325
+T ++ + R A +L +MK +PDV Y+I++ + + K+ +L +M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGD 384
G+ P+ TYN I+ K E + M+ + CKP+ T N+ L A G
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 385 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 444
+ + ++ G+E N+ T+ I+LD + S ++E M K + T++
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 445 IICCMCQKGLINEALELMKKIVAKSFAPG 473
+I + G + + L + + ++ P
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 115/309 (37%), Gaps = 39/309 (12%)
Query: 190 IEESTFRVLISALCRIRRVDYAVKILNCMIED-GFGLDGKICSLIISSLCEQNDVTSAEA 248
+ + L+SA R R D A +L M D S++I S + +
Sbjct: 183 VNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 242
Query: 249 LVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLS 307
L+ DMR+ G P + + +I K + ++ L QM +D KPD L
Sbjct: 243 LL--SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLR 300
Query: 308 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 367
G ++ +++ G+ P++ T+N+ ++ K + +++ M K
Sbjct: 301 AFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSW 360
Query: 368 NVVTCNTLLGALCEAGDL--------------------------------SKAK---GVM 392
+VT N ++ A AGDL SKA GV+
Sbjct: 361 TIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL 420
Query: 393 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 452
+ + + L+L + ++D + E +LE M KK F P T+ ++
Sbjct: 421 RFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRIS 480
Query: 453 GLINEALEL 461
G+ EL
Sbjct: 481 GMTTHVKEL 489
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 198 LISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRK 257
LI L + ++ + A ++ MI +G ++ ++ + ++S+ +A L+ M+
Sbjct: 156 LIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLL--ERMKS 213
Query: 258 LGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
C P V ++ +I+ ++ +L+ M++ GI+P+ + Y ++ +V
Sbjct: 214 SHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 317 KLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 375
+++ +ML PD +T N + +++ + G +PN+ T N L
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 376 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 435
L + ++G+ K VM+ M + TY +++D ++ + L M +
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 436 YP 437
+P
Sbjct: 394 FP 395
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 16/297 (5%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKIC-SLIISSLCEQNDVTSAEALVVW 252
T +I+A+ R +R ++ + + + + + II++ C++ +V EAL V+
Sbjct: 182 TCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVD--EALEVY 239
Query: 253 GD-MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 311
+ F P + + + + LV+ R DA +L +M G D Y ++ G +
Sbjct: 240 RHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLD 299
Query: 312 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 371
GD+ K E FDE+ + D ++ ++ EA++ S++ + + T
Sbjct: 300 LGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPT 359
Query: 372 CNTLLGALCEAGDLSKAKGVMKEM-----GLKGVELNLHTYRIMLDGLVGKAEIGEA--- 423
N LL + G +A + EM + +N T IM++ E EA
Sbjct: 360 GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINT 419
Query: 424 -SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF---APGARA 476
+ ++ K F + NI+ C++G++ EA + V++S AP RA
Sbjct: 420 FKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRA 476
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-G 364
+ ++ D +L + + P V+T N I + + + E+I + K
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 365 CKPNVVTCNTLLGALCEAGDLSKAKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEA 423
PNVV+ N ++ A C+ G++ +A V + + + TYR + GLV IG+A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 424 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 468
+ LL EML K S+ ++N+I G ++A+E ++ +K
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 271 IRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VL 328
I F E R +D L IL +MK+ KPDV+ Y VL + G L +E+L VL
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAG-------LVNEILGVL 235
Query: 329 GLIPD-------VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 381
+ + + TYN +NG+ K + D + I + M++ G +P++++ ++ +L
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 382 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 430
+G++ ++ + EM + + +++ YR ++D L + A L +E+
Sbjct: 296 SGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 301 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 360
CY + + D L L E+ L + N I + ++D+ + I+ M
Sbjct: 144 CYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEM 203
Query: 361 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAE 419
+ CKP+V+T N++L L AG +++ GV+ M V +N+ TY +L+G+
Sbjct: 204 KEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACR 263
Query: 420 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 479
++ EM++ P ++ +I + + G + E+L L ++ + P + A
Sbjct: 264 FDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRA 323
Query: 480 LL 481
L+
Sbjct: 324 LI 325
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 332 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP--NVVTCNTLLGALCEAGDLSKAK 389
PDV TYN ++ L + V+E + ++ +M K C N++T NT+L + +A
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTM-KEDCSVSVNIITYNTVLNGMRKACRFDMCL 268
Query: 390 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 449
+ EM G+E +L +Y ++D L + E+ L +EM ++ P + +I C+
Sbjct: 269 VIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCL 328
Query: 450 CQKGLINEALEL 461
+ G AL+L
Sbjct: 329 KKSGDFQSALQL 340
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 286 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEMLVLGLIPDVYTYNVYIN 342
+ + MK DG++P I S +V +L + F +EM +G+ PDV YN I+
Sbjct: 63 VYDDMKLDGVQPTA---DIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLIS 119
Query: 343 --GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 400
G CK K EAI++ D M + KPN T LL A +G L ++++M GV
Sbjct: 120 TCGKCKNGK--EAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGV 177
Query: 401 ELNLHTYRIMLDGLVGK 417
LN Y ++ + K
Sbjct: 178 GLNQFCYAGLITAHLNK 194
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 205 IRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLG----- 259
I RV Y +L+ + G+ + ++ + + E+N VT L + R++
Sbjct: 74 INRVVYWTSLLSKYAKTGYLDEARV---LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTL 130
Query: 260 ---FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 316
V+ +T M+ L + R DA+ + ++M + +VV + +++G++ GD
Sbjct: 131 FREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDME 186
Query: 317 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 376
K ++FD M DV ++N I G + + ++EA + M + NVVT +++
Sbjct: 187 KAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMV 238
Query: 377 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 432
C GD+ +A + EM E N+ ++ M+ G EA +L EM K
Sbjct: 239 YGYCRYGDVREAYRLFCEM----PERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 225 LDGKICSLIISSLCEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDAL 284
D + C++II+ + D+ AE L ++ + +T MI ++ A
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETL-----FERVKSLHDKVSWTSMIDGYLEAGDVSRAF 420
Query: 285 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 344
+ ++ D V +T+++SG+V + + L +M+ GL P TY+V ++
Sbjct: 421 GLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA 476
Query: 345 CKQNKVDEA--IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 402
+ +D+ I V + P+++ N+L+ + G + A + +M V+
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQK 532
Query: 403 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 462
+ ++ M+ GL +A L +EML P S TF ++ GLI LEL
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF 592
Query: 463 KKIVAK-SFAPG 473
K + S PG
Sbjct: 593 KAMKETYSIQPG 604
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 315 YVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 373
YVK + + + +P +V ++ V + LC + ++A+++ D M + NVV+ N
Sbjct: 118 YVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWN 173
Query: 374 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 433
TL+ L GD+ KAK V M + V ++ M+ G + + EA LL +M +K
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVV----SWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 434 CFYPRSSTFDNIICCMCQKGLINEALELM-----KKIVAKSFAPGARAW-----EALLL 482
T+ +++ C+ G + EA L + IV+ + AW EAL+L
Sbjct: 230 NVV----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 142/343 (41%), Gaps = 65/343 (18%)
Query: 178 QILLKSQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSL 237
QI+ ++ H + I LISAL R+ + AV++ N + E L C+ +I +
Sbjct: 41 QIIRRNLHEDLHIAPK----LISALSLCRQTNLAVRVFNQVQEPNVHL----CNSLIRAH 92
Query: 238 CEQNDVTSAEALVVWGDMRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMK---- 291
+ + +A V+ +M++ G F D FL+K G L ++ M
Sbjct: 93 AQNS--QPYQAFFVFSEMQRFGL------FADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 292 --------------------------QDGIK-------PDVVCYTIVLSGIVAEGDYVKL 318
+D +K D V + +L G+V G+
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
LFDEM LI ++N ++G + ++ +A ++ + M + N V+ +T++
Sbjct: 205 RRLFDEMPQRDLI----SWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMG 256
Query: 379 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 438
+AGD+ A+ + +M L N+ T+ I++ G K + EA L+++M+
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 439 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
++ +I+ + GL++ + + + + A ALL
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 264 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL-----SGIVAEGDYVKL 318
++ + M+ L G +A+ + ++M+++GI+PD V + VL +G++ EG +
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG----I 436
Query: 319 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 378
D + V L+P V Y ++ L + ++ EAI++V +M +PNVV LLGA
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGA 493
Query: 379 LCEAGDLSKAKGVMKEM 395
++ AK V+ +
Sbjct: 494 CRMHNEVDIAKEVLDNL 510
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 298 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 357
+VV +TI+++G +G + D L D+M+ GL D + + + ++I
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 358 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 417
+ + N N LL + G+L KA V ++ K +L ++ ML GL
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVH 394
Query: 418 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 460
EA L M ++ P TF ++C GLI+E ++
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 321 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 380
LF E G P T ++ +N L + K EA I + ++ + + V NTL+ A+
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 381 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 440
EAG L A + + M GV ++ TY M+ ++ +A + + Y
Sbjct: 786 EAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 441 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ N+I + G ++EAL L ++ K PG ++ ++
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 7/281 (2%)
Query: 187 KIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQNDVTSA 246
K + S +IS+ R V A I + +I G ++ + + +I+ Q+ + A
Sbjct: 630 KTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA 689
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+ L + K PG MI V+ DA + + + G P V +I++
Sbjct: 690 KRLYLAAGESK---TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILV 746
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ + G + + + + L + D YN I + + K+ A +I + M G
Sbjct: 747 NALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN--LHTYRIMLDGLVGKAEIGEAS 424
++ T NT++ L KA + G+ L+ ++T IM G GK + EA
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK--MSEAL 864
Query: 425 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 465
L EM KK P + +++ ++ L +E EL++ +
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAM 905
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 138/346 (39%), Gaps = 8/346 (2%)
Query: 123 IFVYLIRFYGLADRIQDAVDLFFRIPRFRCTPTVXXXXXXXXXXXXXXXXXXMVPQILLK 182
++ ++R YG +I+ A + F + C P M+
Sbjct: 190 VYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT-FYKA 248
Query: 183 SQHMKIRIEESTFRVLISALCRIRRVDYAVKILNCMIEDGFGLDGKICSLIISSLCEQND 242
Q +I + S + ++S+L + + + M+E+G + +L++SS +Q
Sbjct: 249 VQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG- 307
Query: 243 VTSAEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY 302
EAL +G+M+ LGF P + ++ +I VK A+ + M+ GI P
Sbjct: 308 -FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 303 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 362
+LS +Y K LF +M + D + I K +A + + +
Sbjct: 367 ATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER 426
Query: 363 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD--GLVGKAEI 420
L + T + +G++ KA V++ M + + L+ Y +ML + +
Sbjct: 427 LNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDC 486
Query: 421 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 466
E + L K P +S+ ++++ + L +A +K+I+
Sbjct: 487 AEEAF---RALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIM 529
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 326 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 385
L L P V Y + + + K+ A + M+++GC+P+ V C T+L G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 386 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 445
S K + + + L+ Y ML L K+ G+ L EM+++ P T+ +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 446 ICCMCQKGLINEALELMKKIVAKSFAP 472
+ ++G EAL+ ++ + F P
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVP 326
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 88/186 (47%)
Query: 247 EALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL 306
+A+ ++ + R+ G +T+MI K + +AL + ++M++ GIKP Y +++
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 307 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 366
+ ++DEL M G D+ TY I + ++ EA + + + + G
Sbjct: 887 KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 367 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 426
+ ++LL AL +AG + +A+ +M G+ + R +L G + + + L
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 427 LEEMLK 432
E+M++
Sbjct: 1007 YEKMIR 1012
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 231 SLIISSLCEQNDVTSAEALVVWGDMRKLGFC----PGVMDFTDMIRFLVKEERGMDALYI 286
SLI+S L N + +A +L D+ ++ F PGV+ + MIR + +AL
Sbjct: 27 SLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGF 86
Query: 287 LNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 345
M ++ GI PD +T L D+ K + D + +GL DVY + C
Sbjct: 87 FGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYC 146
Query: 346 KQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGALCEAGDLSKA 388
K + A Q+ D M +K +VVT NT++ L + G S A
Sbjct: 147 KARDLVSARQVFDKMHVK-----DVVTWNTMVSGLAQNGCSSAA 185
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 287 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 346
L +M ++ V + ++SG V + LF M+ +G+ PD +TY ++
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 347 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 406
QI +IK + +V C+TL+ + GDL ++ + + K + + T
Sbjct: 616 LASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE----KSLRRDFVT 671
Query: 407 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE---LMK 463
+ M+ G + EA L E M+ + P TF +I+ GLI++ LE +MK
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Query: 464 K 464
+
Sbjct: 732 R 732
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 296 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 355
+ D V Y ++SG +A G + LF EM +GL T+N I+GL + N +E I
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMISGLMQNNHHEEVIN 352
Query: 356 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 412
MI+ G +PN VT ++LL +L + +L K + G + N++ ++D
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+R LG G+++ +MIR L K E N + Y IVL ++ +
Sbjct: 493 LRALG-AEGMVN--EMIRHLQKAE---------NLSAHSNMYLGTPTYNIVLHSLLEANE 540
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +F M G DV TYN+ I+ + A +V MI+ G P VT
Sbjct: 541 TDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTA 600
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ L + +A ++ + L+ + L++ +Y +L K I ++E+M ++
Sbjct: 601 LMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREK 660
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMK 463
P +T + C +KG A+E +
Sbjct: 661 VNPDPTTCHYVFSCYVEKGYHATAIEALN 689
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 246 AEALVVWGDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIV 305
EA +++ +M++ ++ + MI L + G + L + + MK++G +P ++
Sbjct: 368 GEAKLIFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 306 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 365
+ G Y + ++L +G + N I K V+EA Q+ +M L
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-- 481
Query: 366 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 425
+ V+ N L+ AL + G ++A V +EM KG+ + T +L + +
Sbjct: 482 --DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 426 LLEEMLKKCFY---PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 481
+ M + Y P + + +I +C+ G ++A +++ + F P A WEALL
Sbjct: 540 YFDSM--ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIWEALL 593
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 12/209 (5%)
Query: 255 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 314
+R LG G+++ +MIR L K E N + Y IVL ++ +
Sbjct: 521 LRALG-AEGMVN--EMIRHLQKAE---------NLSAHSNMYLGTPTYNIVLHSLLEANE 568
Query: 315 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 374
+ +F M G DV TYN+ I+ + A +V MI+ G P VT
Sbjct: 569 TDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTA 628
Query: 375 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 434
L+ L + +A ++ + L+ + L++ +Y +L K I ++E+M ++
Sbjct: 629 LMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREK 688
Query: 435 FYPRSSTFDNIICCMCQKGLINEALELMK 463
P +T + C +KG A+E +
Sbjct: 689 VNPDPTTCHYVFSCYVEKGYHATAIEALN 717
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 40/259 (15%)
Query: 194 TFRVLISALCRIRRVDYAVKILNCMI-EDGFGLDGKICSLIISSLCEQNDVTSAEALVVW 252
T + ALC A+ L+C I G D +C+ ++ + + D+ SA L
Sbjct: 115 TLKACARALC-----SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 253 GDMRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 312
+R V + +I LV R +A+ + +M+ +GI+ V L
Sbjct: 170 MPVRD------VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHL 223
Query: 313 GDYVKLDELF-----DEMLVLGLIPDVY-----------------------TYNVYINGL 344
GD + + +F D ++V D+Y T+N I G
Sbjct: 224 GDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 345 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 404
+ A++I D + G KP+ V+ L A AG + V M KGVE N+
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNM 343
Query: 405 HTYRIMLDGLVGKAEIGEA 423
Y ++D L + EA
Sbjct: 344 KHYGCVVDLLSRAGRLREA 362