Miyakogusa Predicted Gene

Lj1g3v2405410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2405410.1 Non Chatacterized Hit- tr|K4CRX8|K4CRX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,42.61,7e-18,
,CUFF.28991.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-26525...   120   2e-28

>AT5G01710.1 | Symbols:  | methyltransferases | chr5:263709-265250
           REVERSE LENGTH=513
          Length = 513

 Score =  120 bits (301), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 14/112 (12%)

Query: 1   MERTAGKFGSLRNLLIRFLISGVFIIAVRFAYVISIAGESCNVADFCFFSLPESLSHVIA 60
           ME + GK   LRN+++R L+ GV II VRFAYV++I GESCN  DFCFFSLPE+L+ VI+
Sbjct: 1   METSMGKPSFLRNIMVRVLLFGVLIIVVRFAYVVTITGESCNRGDFCFFSLPENLNFVIS 60

Query: 61  GTGPLAVESASGGSGL------SPA-ELYTSKDWLDAVHFYSSAFQDLVAGG 105
           G       +ASG S +      SP  +LYT++DW+ +V FYSS FQDL+A G
Sbjct: 61  G-------AASGSSAIDAIRSTSPGDDLYTTRDWIKSVQFYSSIFQDLIADG 105