Miyakogusa Predicted Gene
- Lj1g3v2391190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2391190.1 tr|G7KU41|G7KU41_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,78.12,0,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,CUFF.28979.1
(640 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 659 0.0
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 209 5e-54
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 1e-49
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 8e-48
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 188 1e-47
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 1e-46
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 3e-46
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 8e-46
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 8e-46
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 179 6e-45
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 8e-45
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 177 2e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 172 6e-43
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 170 4e-42
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 1e-40
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 4e-40
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 2e-39
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 159 4e-39
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 7e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 1e-37
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 1e-37
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 6e-37
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-36
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 4e-33
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 3e-32
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 5e-31
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 7e-30
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-29
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 125 8e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 120 4e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 8e-27
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 118 1e-26
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 114 3e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 113 5e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 7e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 104 2e-22
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 5e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 6e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 3e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 94 3e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 94 4e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 3e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 88 2e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 87 3e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 85 2e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 82 1e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 80 3e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 78 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 77 5e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 77 5e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 72 9e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 72 1e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 70 3e-12
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 6e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 7e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 67 3e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 67 4e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 67 5e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 9e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 64 2e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 64 3e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 5e-10
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 62 1e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 61 2e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 3e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 61 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 60 5e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 60 6e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 59 8e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 54 2e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 54 5e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 53 7e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 52 1e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 52 2e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/578 (55%), Positives = 401/578 (69%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++++ +H+LCD+ RF EAH+ F + LASG +PD RTCNV++ARLL SR+P+ T ++ L
Sbjct: 92 NLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRL 151
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
I K FVPSL NY+RLM+Q C R DAH++ FDM+NRGH P+VV++TTLI GYC +
Sbjct: 152 IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIR 211
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A KVFDEM G+ PNSLT SVLI G L+ RD+E GR+LM +LWE M E ++ +K
Sbjct: 212 ELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMK 271
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
AAFANLVDS+CREG+FN++F IAE + S+ E YG MIDSLC+ R HGAARIVY
Sbjct: 272 AAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
MK +G P YN IIHGL KDG CMR YQ ++TYK+L+E+LC
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D KAR VL+LMLRKEG D+TRIYNIYLR SML+ CR D TLN
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
TVING CK G VD+A+KVL DM+ GKFCAPD V+ TV+ GLL R +EA D+ +RVMP
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
EN ++P VV YNA+IRGL+KL + ++A V+ + + ADSTTY II++GLC ++++
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
AK FW DVIWPSG HD FVYAA LKGLC+SG ++ACHFLY+L DSG PN+ YN +I
Sbjct: 572 MAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVI 631
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQ 614
LK EAYQI+ EM+KNG PD VTWRIL K+
Sbjct: 632 AECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 208/509 (40%), Gaps = 13/509 (2%)
Query: 110 YHRLMDQFCVFRR-PCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEM 168
+ R + C RR P +A RI + RG+ P+ ++ +++I+ C G +A + F
Sbjct: 57 WRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLF 116
Query: 169 LESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLC 228
L SG P+ T +V+I +L R ++ +L + + E + + L++ LC
Sbjct: 117 LASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRL---IGFKKEFVPSLTNYNRLMNQLC 173
Query: 229 REGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDV 288
+ ++ ++ +G L + V + +I C++ A ++ EM+ G P+ +
Sbjct: 174 TIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSL 233
Query: 289 LYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV-----LVEALCHVFDVDKARE 343
+ +I G K D G + D + K LV+++C + E
Sbjct: 234 TLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFE 293
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
+ + M E V+ Y + + M + + N +I+G C
Sbjct: 294 IAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLC 353
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
K G A ++L++ +F P ++ ++ L +A ++ ++ + G
Sbjct: 354 KDGGCMRAYQLLEEGSEFEF-FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT 412
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
+ YN +RGL + P + V SM+ D T ++ GLC ++++A
Sbjct: 413 RI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 524 DVIWPS-GIHDNFVYAAILKGLCRSGNFNEACHFLYELV-DSGVSPNIFSYNILINCACH 581
D++ D ++ GL G EA L ++ ++ + P + +YN +I
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L EA + +++K + D T+ I+
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAII 560
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 260/537 (48%), Gaps = 50/537 (9%)
Query: 79 RLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+LL + ++ + LV SL + + G +L Y+ L++ FC + A + M
Sbjct: 15 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ P++V+ ++L+NGYC I DA + D+M+E G P+++T++ LI G+ L
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF----LHNK 130
Query: 197 RELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
L +RM V+ G + + + +V+ LC+ G + F + ++ A+ V+
Sbjct: 131 ASEAVALVDRM---VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
+ +IDSLCK A + EM+ +G P+ V
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV-------------------------- 221
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
TY L+ LC A ++L M+ K+ +N + A
Sbjct: 222 ---------TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M++ D+ T N++INGFC +D+A K + + ++ K C PD+ ++ T+
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA-KQMFEFMVSKDCFPDLDTYNTL 331
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I G + RV++ +LF R M GL VTY LI+GL+ ++A V+ MVSDG
Sbjct: 332 IKGFCKSKRVEDGTELF-REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEA 553
+ D TY+I+++GLC+ ++E+A + D + S I D ++Y +++G+C++G ++
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L GV PN+ +YN +I+ C L EAY ++++MK++G PD T+ L
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 243/526 (46%), Gaps = 46/526 (8%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T N+L+ R AL+ ++ K G+ PS+V L++ +C +R DA +
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMM--KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 104
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M G+ P+ +++TTLI+G +A + D M++ G +PN +TY V++ G+ +
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
D++ L+ K+ E +E + V F ++DSLC+ ++ + +E+ +G
Sbjct: 165 DIDLAFNLLNKM-EAAKIEAD----VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y +I LC GR+ A++++ +M ++ P+ V +N +I K+G + +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY L+ C +DKA+++ + M+ K+
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------------------- 320
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
C D+ T NT+I GFCK+ V++ ++ ++M + D V++
Sbjct: 321 ----------------CFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTY 363
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
TT+I GL D A +F + M +G+ P ++TY+ L+ GL + A V+ M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNF 550
I D YT ++EG+C ++++ + + G+ N V Y ++ GLC
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLL 481
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
EA L ++ + G P+ +YN LI K+ + +++REM+
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 191/437 (43%), Gaps = 44/437 (10%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T +H L N+ SEA + G P+ T V++ L + + L+ +
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
AK +V ++ ++D C +R DA +F +M+ +G PNVV+Y++LI+ CS G
Sbjct: 177 EAAK--IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
DA ++ +M+E + PN +T++ LI ++E +L + +R S++ +
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPD---- 289
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ + +L++ C ++ ++ E + + + Y +I CK R +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM RG V V Y +I GL DGDC + TY +L++ LC+
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++KA EV M + S+ + D+
Sbjct: 410 KLEKALEVFDYMQK-----------------------------------SEIKLDIYIYT 434
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+I G CK G VD+ + + + K P+VV++ T+ISGL + EA+ L + M
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MK 492
Query: 457 ENGLRPCVVTYNALIRG 473
E+G P TYN LIR
Sbjct: 493 EDGPLPDSGTYNTLIRA 509
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 168/416 (40%), Gaps = 50/416 (12%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F L+ ++ + F+ V + E++ G Y +I+ C+ + A ++ +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
K G+ PS V T L+ CH +
Sbjct: 73 KLGYEPSIV-----------------------------------TLSSLLNGYCHGKRIS 97
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A ++ M+ T + + M++ C+ +++T V+
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
NG CK G +D A +L M K A DVV F T+I L VD+A +LF + M G
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEA-DVVIFNTIIDSLCKYRHVDDALNLF-KEMETKG 215
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+RP VVTY++LI L R +DA + S M+ I + T+ +++ + EA+
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
D+I S D F Y +++ G C ++A +V P++ +YN LI
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQG-----------KVRKQTLSE 624
C + ++ REM GL D VT+ L IQG KV KQ +S+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTL--IQGLFHDGDCDNAQKVFKQMVSD 389
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 198/471 (42%), Gaps = 42/471 (8%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P++ + L++ + + ++M G+ N TY++LI + + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+ K+ M + E + ++L++ C ++ + +++ G + + + +I
Sbjct: 68 LGKM---MKLGYEPSI--VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
L + A +V M +RG P+ V Y +++GL K GD +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXX 379
+ ++++LC VD A + K M K G+
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GI------------------------- 216
Query: 380 XXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL 439
R +V+T +++I+ C G +A ++L DM+ K P++V+F +I +
Sbjct: 217 ---------RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI-NPNLVTFNALIDAFV 266
Query: 440 DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
+ EA L H M + + P + TYN+LI G R + A ++ MVS D
Sbjct: 267 KEGKFVEAEKL-HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 500 TTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYE 559
TY +++G C ++E+ + ++ + D Y +++GL G+ + A +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+V GV P+I +Y+IL++ C+ +A ++ M+K+ + D + +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 18/286 (6%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDS----NRFSEAHQCFSISLASGSVPDHRTCNVLL 77
S I +P+L T +AL D+ +F EA + + PD T N L+
Sbjct: 243 LSDMIEKKINPNL-----VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 78 ARL-LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+ R L + +V+K F P L Y+ L+ FC +R D +F +M +R
Sbjct: 298 NGFCMHDR--LDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G + V+YTTLI G G +A+KVF +M+ GV P+ +TYS+L+ G+ LE
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
E +++ M + E + + + +++ +C+ G ++ + + L +G V Y
Sbjct: 415 LE----VFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
MI LC A ++ +MK+ G +P YN +I +DGD
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 256/558 (45%), Gaps = 65/558 (11%)
Query: 83 SRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCD-AHRIFFDMKNRGHCPN 141
SR L AL + GF+P +++Y+ ++D +R A +F +M PN
Sbjct: 145 SRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPN 204
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
V +Y LI G+C G I A +FD+M G PN +TY+ LI G + R ++ G
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG----F 260
Query: 202 KLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
KL M+++ G++ + ++ +++ LCREG EV + E+ +G +EV Y +I
Sbjct: 261 KLLRSMALK---GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
CK G +H A + EM + G PS + Y +IH + K G+ R +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXX 379
+ TY LV+ +++A VL+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLR--------------------------------- 404
Query: 380 XXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL 439
M ++ V+T N +ING C TG +++A+ VL+DM K +PDVVS++TV+SG
Sbjct: 405 --EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFC 461
Query: 440 DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
+ VDEA + R M E G++P +TY++LI+G + +R +A +Y M+ G+ D
Sbjct: 462 RSYDVDEALRV-KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 500 TTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYE 559
TYT ++ C +E+A ++++ + D Y+ ++ GL + EA L +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 560 LVDSGVSPNIFSYNILI-NCA--------------CHLDLKSEAYQIVREMKKNGLNPDC 604
L P+ +Y+ LI NC+ C + +EA Q+ M PD
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 605 VTWRIL---HKIQGKVRK 619
+ I+ H G +RK
Sbjct: 641 TAYNIMIHGHCRAGDIRK 658
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/580 (26%), Positives = 249/580 (42%), Gaps = 65/580 (11%)
Query: 60 ISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCV 119
++ A G +P + N +L +RS+ + V ++ + P++ Y+ L+ FC
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML-ESQVSPNVFTYNILIRGFC- 216
Query: 120 FRRPCDAHRIFFD-MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSL 178
F D FD M+ +G PNVV+Y TLI+GYC + I D K+ M G+EPN +
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 179 TYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFR 238
+Y+V+I G LCREG EV
Sbjct: 277 SYNVVING----------------------------------------LCREGRMKEVSF 296
Query: 239 IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLT 298
+ E+ +G +EV Y +I CK G +H A + EM + G PS + Y +IH +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 299 KDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTR 358
K G+ R + + TY LV+ +++A VL+ M
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 359 IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM 418
YN + M E DV++ +TV++GFC++ VDEAL+V ++M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 419 LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
+ K PD ++++++I G + R EA DL+ M GL P TY ALI
Sbjct: 477 V-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE-MLRVGLPPDEFTYTALINAYCMEG 534
Query: 479 RPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY- 537
A +++ MV G+ D TY++++ GL + EAK + + + + Y
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 538 --------------AAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLD 583
+++KG C G EA ++ P+ +YNI+I+ C
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 584 LKSEAYQIVREMKKNGLNPDCVT----WRILHKIQGKVRK 619
+AY + +EM K+G VT + LHK +GKV +
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK-EGKVNE 693
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 22/324 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H++C + + A + G P+ RT L+ + + + ++R +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM--NDN 409
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF PS+V Y+ L++ CV + DA + DMK +G P+VVSY+T+++G+C + +A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+V EM+E G++P+++TYS LI+G ++R + C L+E M + V +
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA----CDLYEEM-LRVGLPPDEFTYT 524
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+++ C EG + ++ E+ +G L + V Y +I+ L K R A R++ ++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 282 GFVPSDVLYNYIIHGLTK----------DGDCMRGYQXXXXXXXXXXXXCDH-----TYK 326
VPSDV Y+ +I + G CM+G +H Y
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 327 VLVEALCHVFDVDKAREVLKLMLR 350
+++ C D+ KA + K M++
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 151/355 (42%), Gaps = 38/355 (10%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
V+ ++ S ++ A IV+ + GF+P + YN ++ +
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR----------- 184
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
++ A V K ML + YNI +R
Sbjct: 185 -----------------------NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 221
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
M C +V+T NT+I+G+CK +D+ K+L+ M + K P+++S+
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL-KGLEPNLISYNV 280
Query: 434 VISGLLDATRVDE-AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
VI+GL R+ E +F L M G VTYN LI+G K + A +++ M+
Sbjct: 281 VINGLCREGRMKEVSFVLTE--MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNE 552
G+ TYT ++ +C + A F + + Y ++ G + G NE
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
A L E+ D+G SP++ +YN LIN C +A ++ +MK+ GL+PD V++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 46 CDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVP 105
C + + +A G PD + + +L+ RS + + R ++ + G P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV--EKGIKP 483
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
+ Y L+ FC RR +A ++ +M G P+ +YT LIN YC G + A ++
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE----------SGV 215
+EM+E GV P+ +TYSVLI G+ ++ + L+ KL+ SV + S +
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ + +L+ C +G E ++ E + + + Y MI C+ G A +
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDG 301
EM K GF+ V ++ L K+G
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
P + + ++A C +A Q + + G +PD T +VL+ L + +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQ---------------FCVFRRPCDAHRIFFDMKNR 136
L+ L + VPS V YH L++ FC+ +A ++F M +
Sbjct: 577 LLLKLFYEES--VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
H P+ +Y +I+G+C G I A ++ EM++SG +++T L++ + +E +
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
++ + + KV LV+ REG + V + E+ G L
Sbjct: 695 NSVIVHVLRSCELSEAEQAKV-----LVEINHREGNMDVVLDVLAEMAKDGFL 742
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 26/267 (9%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
++ + C+ R EA + L G PD T L+ + L ++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV- 547
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTT----------- 147
+ G +P +V Y L++ R +A R+ + P+ V+Y T
Sbjct: 548 -EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 148 ----LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
LI G+C G + +A +VF+ ML +P+ Y+++I G + D+ L
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY----TL 662
Query: 204 WERMSVEVESG--VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
++ M V+SG + LV +L +EG NE+ + + L+E +++
Sbjct: 663 YKEM---VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDV 288
+ G ++ EM K GF+P+ +
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNGI 746
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 259/537 (48%), Gaps = 50/537 (9%)
Query: 79 RLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+LL + ++ + +V SL + + V L Y+ L++ FC + A + M
Sbjct: 90 KLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ P++V+ ++L+NGYC I DA + D+M+E G P+++T++ LI G+ L
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF----LHNK 205
Query: 197 RELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
L +RM V+ G + + + +V+ LC+ G + + ++ A+ V+
Sbjct: 206 ASEAVALVDRM---VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
+ +IDSLCK A + EM+ +G P+ V
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV-------------------------- 296
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
TY L+ LC A ++L M+ K+ +N + A
Sbjct: 297 ---------TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M++ D+ T N+++NGFC +D+A K + + ++ K C PDVV++ T+
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA-KQMFEFMVSKDCFPDVVTYNTL 406
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I G + RV++ +LF R M GL VTY LI+GL+ ++A V+ MVSDG
Sbjct: 407 IKGFCKSKRVEDGTELF-REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEA 553
+ D TY+I+++GLC+ ++E+A + D + S I D ++Y +++G+C++G ++
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L GV PN+ +YN +I+ C L EAY ++++MK++G P+ T+ L
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 243/526 (46%), Gaps = 46/526 (8%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T N+L+ R AL+ ++ K G+ PS+V L++ +C +R DA +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMM--KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M G+ P+ +++TTLI+G +A + D M++ G +PN +TY V++ G+ +
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
D + L+ K+ E +E + V F ++DSLC+ ++ + +E+ +G
Sbjct: 240 DTDLALNLLNKM-EAAKIEAD----VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y +I LC GR+ A++++ +M ++ P+ V +N +I K+G + +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY LV C +DKA+++ + M+ K+
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------------------- 395
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
C DV+T NT+I GFCK+ V++ ++ ++M + D V++
Sbjct: 396 ----------------CFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTY 438
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
TT+I GL D A +F + M +G+ P ++TY+ L+ GL + A V+ M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNF 550
I D YT ++EG+C ++++ + + G+ N V Y ++ GLC
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLL 556
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
EA L ++ + G PN +YN LI K+ + +++REM+
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 191/437 (43%), Gaps = 44/437 (10%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T +H L N+ SEA + G P+ T V++ L + L+ +
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
AK +V ++ ++D C +R DA +F +M+ +G PNVV+Y++LI+ CS G
Sbjct: 252 EAAK--IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
DA ++ +M+E + PN +T++ LI ++E +L + +R S++ +
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPD---- 364
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ + +LV+ C ++ ++ E + + + V Y +I CK R +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM RG V V Y +I GL DGDC + TY +L++ LC+
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++KA EV M + S+ + D+
Sbjct: 485 KLEKALEVFDYMQK-----------------------------------SEIKLDIYIYT 509
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+I G CK G VD+ + + + K P+VV++ T+ISGL + EA+ L + M
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MK 567
Query: 457 ENGLRPCVVTYNALIRG 473
E+G P TYN LIR
Sbjct: 568 EDGPLPNSGTYNTLIRA 584
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 190/454 (41%), Gaps = 44/454 (9%)
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS-VEVESGVK 216
+ DA +F M++S P+ + ++ L+ + + + + ++ L E+M +E+ G+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD----VVISLGEKMQRLEIVHGL- 120
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L++ CR + + ++ G V +++ C R A +V
Sbjct: 121 -YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M + G+ P + + +IHGL TY V+V LC
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D D A +L M ++ ADV+ N
Sbjct: 240 DTDLALNLLN-----------------------------------KMEAAKIEADVVIFN 264
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+I+ CK VD+AL + ++M K P+VV+++++IS L R +A L M
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-MI 322
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
E + P +VT+NALI K + +A +Y M+ I D TY +V G C D+++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+AK + ++ D Y ++KG C+S + E+ G+ + +Y LI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
H A ++ ++M +G+ PD +T+ IL
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 18/286 (6%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDS----NRFSEAHQCFSISLASGSVPDHRTCNVLL 77
S I +P+L T +AL D+ +F EA + + + PD T N L+
Sbjct: 318 LSDMIEKKINPNL-----VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 78 ARL-LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+ R L + +V+K F P +V Y+ L+ FC +R D +F +M +R
Sbjct: 373 NGFCMHDR--LDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G + V+YTTLI G G +A+KVF +M+ GV P+ +TYS+L+ G+ LE
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
E +++ M + E + + + +++ +C+ G ++ + + L +G V Y
Sbjct: 490 LE----VFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
MI LC A ++ +MK+ G +P+ YN +I +DGD
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 254/541 (46%), Gaps = 50/541 (9%)
Query: 75 VLLARLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD 132
V ++LL + + + LV SL + G +L Y L++ FC + A +
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
M G+ P++V+ +L+NG+C I DA + +M+E G +P+S T++ LI G+ +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
L+ +RM V+ + + +V+ LC+ G + + +++ QG +
Sbjct: 202 ASEAVALV----DRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME-QGKIEPG 255
Query: 253 VV-YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
VV Y +ID+LC + A + EM +G P+ V YN +I L G +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG--VDKTRIYNIYLRAXXX 369
T+ L++A KEG V+ ++Y+
Sbjct: 316 DMIERKINPNVVTFSALIDAFV-----------------KEGKLVEAEKLYD-------- 350
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
M++ D+ T +++INGFC +DEA K + ++++ K C P+VV
Sbjct: 351 ------------EMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVV 397
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ T+I G A RVDE +LF R M + GL VTY LI G ++ + ++A V+
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELF-REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGN 549
MVSDG+ D TY+I+++GLC+ ++E A + + D + Y +++G+C++G
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+ L GV PN+ +Y +++ C LK EA + REMK+ G PD T+
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 610 L 610
L
Sbjct: 577 L 577
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 236/516 (45%), Gaps = 47/516 (9%)
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
RS+ L L + + K G+ P +V + L++ FC R DA + M G+ P+
Sbjct: 129 RSQLSLALAVLAKMM---KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
++ TLI+G +A + D M+ G +P+ +TY +++ G+ + D++ L+
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K+ + ++E GV + + ++D+LC N+ + E+ +G V Y +I
Sbjct: 246 KMEQG---KIEPGVVI--YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LC GR+ A+R++ +M +R P+ V ++ +I K+G + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
TY L+ C +D+A+ + +LM+ K+
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKD----------------------------- 391
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
C +V+T NT+I GFCK VDE +++ ++M + V++TT+I G A
Sbjct: 392 ------CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFFQA 444
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
D A +F + M +G+ P ++TY+ L+ GL + A V+ + + D T
Sbjct: 445 RECDNAQIVFKQ-MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYEL 560
Y I++EG+C ++E+ + + G+ N V Y ++ G CR G EA E+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
+ G P+ +YN LI K+ + +++REM+
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 195/470 (41%), Gaps = 75/470 (15%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ + L+ C NR S+A + G PD T N L+ L R + ALV +
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 97 IVA--KPGFV-------------------------------PSLVNYHRLMDQFCVFRRP 123
+V +P V P +V Y+ ++D C ++
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 124 CDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
DA +F +M N+G PNVV+Y +LI C+ G DA ++ +M+E + PN +T+S L
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
I ++E L +L ++ +R S++ + + +++L++ C +E + E +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKR-SIDPD----IFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+ V Y +I CK R + EM +RG V + V Y +IHG + +C
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
TY +L++ LC+ V+ A V + + R
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR------------- 494
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
S+ D+ T N +I G CK G V++ + + + K
Sbjct: 495 ----------------------SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KG 531
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
P+VV++TT++SG +EA LF R M E G P TYN LIR
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALF-REMKEEGPLPDSGTYNTLIRA 580
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T +H + A F ++ G +PD T ++LL L + ++T ALV +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN-GKVET-ALVVFEYL 492
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ P + Y+ +++ C + D +F + +G PNVV+YTT+++G+C G
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
+A +F EM E G P+S TY+ LIR L++ D EL+
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 250/532 (46%), Gaps = 48/532 (9%)
Query: 79 RLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+LL + ++ + LV SL + + G +L Y+ L++ FC + A + M
Sbjct: 90 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ P++V+ ++L+NGYC I DA + D+M+E G P+++T++ LI G+ L
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF----LHNK 205
Query: 197 RELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
L +RM V+ G + + + +V+ LC+ G + F + ++ A V+
Sbjct: 206 ASEAVALVDRM---VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y +IDSLCK A + EM+ +G P+ +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI-------------------------- 296
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
TY L+ LC+ A +L M+ ++ +N + A
Sbjct: 297 ---------TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M++ D+ T +++INGFC +DEA K + ++++ K C P+VV++ T+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTL 406
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I+G A R+DE +LF R M + GL VTY LI G ++ + ++A V+ MVSDG
Sbjct: 407 INGFCKAKRIDEGVELF-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEAC 554
+ + TY +++GLC ++E+A + + + Y +++G+C++G +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 555 HFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
L GV P++ YN +I+ C LK EA + R+M+++G PD T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 229/497 (46%), Gaps = 44/497 (8%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T N+L+ R AL+ ++ K G+ PS+V L++ +C +R DA +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMM--KLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M G+ P+ +++TTLI+G +A + D M++ G +PN +TY V++ G+ +
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
D++ L+ K+ + ++E+ V + ++ ++DSLC+ ++ + E+ +G
Sbjct: 240 DIDLAFNLLNKME---AAKIEANVVI--YSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
+ Y +I LC R+ A+R++ +M +R P+ V +N +I K+G + +
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY L+ C +D+A+ + +LM+ K+
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------------------- 395
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
C +V+T NT+INGFCK +DE +++ ++M + V++
Sbjct: 396 ----------------CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTY 438
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
TT+I G A D A +F + M +G+ P ++TYN L+ GL K + A V+ +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
+ TY I++EG+C ++E+ + + D +Y ++ G CR G
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 552 EACHFLYELVDSGVSPN 568
EA ++ + G P+
Sbjct: 558 EADALFRKMREDGPLPD 574
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/569 (22%), Positives = 237/569 (41%), Gaps = 52/569 (9%)
Query: 61 SLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVF 120
+ +SGS D+R +L L S L ++ ++P +PS+ +++L+
Sbjct: 45 AFSSGS-GDYRE---ILRNGLHSMKLDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKM 98
Query: 121 RRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTY 180
++ + M+ G N+ +Y LIN +C I A + +M++ G EP+ +T
Sbjct: 99 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 181 SVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIA 240
S L+ G G +++ LVD + G+
Sbjct: 159 SSLLNGYCH------------------------GKRISDAVALVDQMVEMGY-------- 186
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
+ + + +I L + A +V M +RG P+ V Y +++GL K
Sbjct: 187 --------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
GD + Y ++++LC D A + M K Y
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
+ + M+E + +V+T N +I+ F K G + EA K L D ++
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK-LYDEMI 357
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
+ PD+ +++++I+G R+DEA +F ++ ++ P VVTYN LI G K KR
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFCKAKRI 416
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAA 539
++ ++ M G+ ++ TYT ++ G + A+ + ++ G+H N + Y
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNT 475
Query: 540 ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
+L GLC++G +A L S + P I++YNI+I C + + + + G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 600 LNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+ PD + + + I G RK E +L
Sbjct: 536 VKPDVIIYNTM--ISGFCRKGLKEEADAL 562
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 7/382 (1%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T +H L N+ SEA + G P+ T V++ L + + L+ +
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
AK ++V Y ++D C +R DA +F +M+N+G PNV++Y++LI+ C+
Sbjct: 252 EAAK--IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
DA ++ +M+E + PN +T++ LI ++E L +L ++ +R S++ +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD---- 364
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ +++L++ C +E + E + + V Y +I+ CK R +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +RG V + V Y +IHG + DC TY L++ LC
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++KA V + + R + YNI + S+ + DVI N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 397 TVINGFCKTGSVDEALKVLQDM 418
T+I+GFC+ G +EA + + M
Sbjct: 545 TMISGFCRKGLKEEADALFRKM 566
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 243/527 (46%), Gaps = 44/527 (8%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K G+ P V + L++ C+ R +A + M GH P +++ L+NG C G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ DA + D M+E+G +PN +TY +++ + + EL+ K+ ER + +
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-----KIKLDA 247
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
++ ++D LC++G + F + E+ +G A+ ++Y +I C GR+ A+++ +
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M KR P V ++ +I K+G + TY L++ C
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+DKA +L LM+ K C ++ T N
Sbjct: 368 LDKANHMLDLMVSK-----------------------------------GCGPNIRTFNI 392
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+ING+CK +D+ L++ + M + A D V++ T+I G + +++ A +LF M
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAKELFQE-MVS 450
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+RP +V+Y L+ GL P A ++ + + D Y II+ G+C+ ++++
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
A + + D Y ++ GLC+ G+ +EA ++ + G SPN +YNILI
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKI--QGKVRKQTL 622
+++ +++ E+K+ G + D T +++ + G+++K L
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFL 617
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 240/510 (47%), Gaps = 15/510 (2%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFD----MKNRGHCPNVVSYTTLINGYCSVGGIGD 160
P L+++ RL F V R + + D M+ +G N+ + + +IN C +
Sbjct: 70 PRLIDFSRL---FSVVART-KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A ++++ G EP+++T+S LI G+ LEG +L +RM VE+ +
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLC----LEGRVSEALELVDRM-VEMGHKPTLITL 180
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
LV+ LC G ++ + + + G EV YG ++ +CK G+ A ++ +M++
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
R V Y+ II GL KDG + Y L+ C+ D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
++L+ M++++ ++ + M++ D +T ++I+
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
GFCK +D+A +L D+++ K C P++ +F +I+G A +D+ +LF R M G+
Sbjct: 361 GFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF-RKMSLRGV 418
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
VTYN LI+G +L + A ++ MVS + D +Y I+++GLCD + E+A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 521 FWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
+ + D +Y I+ G+C + ++A L GV P++ +YNI+I C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 581 HLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
SEA + R+M+++G +P+ T+ IL
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 211/503 (41%), Gaps = 42/503 (8%)
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
V+Y + V + DA +F +M P ++ ++ L + + +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M G+ N T S++I + R L M K+ ++ E ++ F+ L++ L
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDT----VTFSTLINGL 152
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
C EG +E + + + G + +++ LC G+ A ++ M + GF P++
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
V Y ++ + K G + Y ++++ LC +D A
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA------ 266
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
+N++ M +AD+I T+I GFC G
Sbjct: 267 ------------FNLF-----------------NEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
D+ K+L+DM+ K PDVV+F+ +I + ++ EA +L H+ M + G+ P VTY
Sbjct: 298 WDDGAKLLRDMIKRKI-TPDVVAFSALIDCFVKEGKLREAEEL-HKEMIQRGISPDTVTY 355
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
+LI G K + + A + MVS G G + T+ I++ G C + I++ + +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 528 PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSE 587
+ D Y +++G C G A E+V V P+I SY IL++ C +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 588 AYQIVREMKKNGLNPDCVTWRIL 610
A +I +++K+ + D + I+
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNII 498
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 211/484 (43%), Gaps = 45/484 (9%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ +T ++ LC R SEA + + G P T N L+ L + L+ +
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ + GF P+ V Y ++ C + A + M+ R + V Y+ +I+G C G
Sbjct: 204 V--ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ +A +F+EM G + + + Y+ LIRG + G +L+ + +R
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP-----D 316
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V AF+ L+D +EG E + +E+ +G + V Y +ID CK + A ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M +G P+ +N +I+G K G + TY L++ C +
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ A+E+ + M+ + R D+++
Sbjct: 437 KLEVAKELFQ-----------------------------------EMVSRRVRPDIVSYK 461
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+++G C G ++AL++ + + K D+ + +I G+ +A++VD+A+DLF +P
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKM-ELDIGIYNIIIHGMCNASKVDDAWDLFCS-LP 519
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG-LCDCDQI 515
G++P V TYN +I GL K ++A ++ M DG + TY I++ L + D
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 516 EEAK 519
+ AK
Sbjct: 580 KSAK 583
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 246/516 (47%), Gaps = 52/516 (10%)
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
L +Y+ L++ FC + A + M G+ P++V+ ++L+NGYC I +A + D
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLV 224
+M +PN++T++ LI G+ L L +RM V G + + + +V
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLF----LHNKASEAVALIDRM---VARGCQPDLFTYGTVV 227
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+ LC+ G + + +++ A+ V+Y +ID+LC + A + EM +G
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
P+ V YN +I L G + T+ L++A
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV----------- 336
Query: 345 LKLMLRKEG--VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
KEG V+ ++Y+ M++ D+ T +++INGF
Sbjct: 337 ------KEGKLVEAEKLYD--------------------EMIKRSIDPDIFTYSSLINGF 370
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
C +DEA K + ++++ K C P+VV++ T+I G A RV+E +LF R M + GL
Sbjct: 371 CMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF-REMSQRGLVG 428
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFW 522
VTYN LI+GL++ + A ++ MVSDG+ D TY+I+++GLC ++E+A +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 523 HDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL 582
+ D + Y +++G+C++G + L GV PN+ Y +I+ C
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 583 DLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
LK EA + REMK++G P+ T+ L I+ ++R
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTL--IRARLR 582
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 227/496 (45%), Gaps = 10/496 (2%)
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
RS+ PL L + + K G+ P +V L++ +C +R +A + M + PN
Sbjct: 128 RSQLPLALAVLGKMM---KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
V++ TLI+G +A + D M+ G +P+ TY ++ G+ + D++ L+
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K+ E+ +E + V + ++D+LC N+ + E+ +G V Y +I
Sbjct: 245 KM-EKGKIEAD----VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LC GR+ A+R++ +M +R P+ V ++ +I K+G + +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
TY L+ C +D+A+ + +LM+ K+ YN ++
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M + + +T NT+I G + G D A K+ + M+ PD+++++ ++ GL
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKY 478
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
++++A +F + ++ + P + TYN +I G+ K + D + ++ S+ G+ +
Sbjct: 479 GKLEKALVVFE-YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT ++ G C EEA + + ++ + ++ Y +++ R G+ + + E+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 562 DSGVSPNIFSYNILIN 577
G + + +++IN
Sbjct: 598 SCGFVGDASTISMVIN 613
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 208/472 (44%), Gaps = 44/472 (9%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T +H L N+ SEA +A G PD T ++ L + +L++ +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM--E 247
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K +V Y ++D C ++ DA +F +M N+G PNVV+Y +LI C+ G
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA ++ +M+E + PN +T+S LI ++E L +L ++ +R S++ + +
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD----IFT 362
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+++L++ C +E + E + + V Y +I CK R + EM
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+RG V + V YN +I GL + GDC + TY +L++ LC ++
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
KA V + YL+ +S+ D+ T N +I
Sbjct: 483 KALVVFE----------------YLQ-------------------KSKMEPDIYTYNIMI 507
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G CK G V++ + + + K P+V+ +TT+ISG +EA LF R M E+G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALF-REMKEDG 565
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
P TYN LIR + + + M S G D++T ++++ L D
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 250/519 (48%), Gaps = 9/519 (1%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L R +I ++P +P+++++ RL ++ + M+ +G N+ + + +IN
Sbjct: 75 LFRDMIHSRP--LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+C + A ++++ G EPN++T+S LI G+ LEG +L +RM VE+
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC----LEGRVSEALELVDRM-VEM 187
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+ LV+ LC G E + +++ G V YG +++ +CK G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
++ +M++R V Y+ II GL K G + TY +L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
C+ D ++L+ M++++ +++ + + M+ D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
IT ++I+GFCK +D+A +++ D+++ K C P++ +F +I+G A R+D+ +LF
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M G+ VTYN LI+G +L + N A ++ MVS + + TY I+++GLCD
Sbjct: 427 -RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ E+A + + D +Y I+ G+C + ++A L GV P + +
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
YNI+I C SEA + R+M+++G PD T+ IL
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 229/480 (47%), Gaps = 7/480 (1%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K G+ P+ + + L++ C+ R +A + M GH P++++ TL+NG C G
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+A + D+M+E G +PN++TY ++ + + EL+ K+ ER ++++++
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDA---- 263
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
++ ++D LC+ G + F + E+ +G + Y +I C GR+ A+++ +
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M KR P+ V ++ +I K+G + TY L++ C
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+DKA +++ LM+ K R +NI + M AD +T NT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I GFC+ G ++ A ++ Q+M+ K P++V++ ++ GL D ++A ++F ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKV-PPNIVTYKILLDGLCDNGESEKALEIFEKI-EK 501
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+ + + YN +I G+ + +DA+ ++ S+ G+ TY I++ GLC + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
A+ + + D + Y +++ G+ ++ + EL G S + + ++I+
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 213/484 (44%), Gaps = 45/484 (9%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ +T ++ LC R SEA + + G PD T N L+ L S + L+ +
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ + G P+ V Y +++ C + A + M+ R + V Y+ +I+G C G
Sbjct: 220 V--EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ +A +F+EM G+ N +TY++LI G + G +L+ + +R +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-----KINPN 332
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V F+ L+DS +EG E + +E+ +G + + Y +ID CK A ++V
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M +G P+ +N +I+G K G + TY L++ C +
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ A+E+ + M+ + +++T
Sbjct: 453 KLNVAKELFQ-----------------------------------EMVSRKVPPNIVTYK 477
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+++G C G ++AL++ + + K D+ + +I G+ +A++VD+A+DLF +P
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKM-ELDIGIYNIIIHGMCNASKVDDAWDLFCS-LP 535
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG-LCDCDQI 515
G++P V TYN +I GL K ++A ++ M DG D TY I++ L D D
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 516 EEAK 519
+ K
Sbjct: 596 KSVK 599
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 251/542 (46%), Gaps = 46/542 (8%)
Query: 79 RLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+LL + + + LV SL + G L Y ++ FC + A + M
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ P++V+ ++L+NGYC I DA + D+M+E G +P++ T++ LI G+
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
L+ ++ +R + + +V+ LC+ G + + +++ A+ V+Y
Sbjct: 208 VALVDQMVQR-----GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
+ID LCK A + EM +G P DV
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRP-DVF--------------------------- 294
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
TY L+ LC+ A +L M+ ++ ++ + A
Sbjct: 295 -------TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
M++ D+ T +++INGFC +DEA K + ++++ K C P+VV+++T+I
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIK 406
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG 496
G A RV+E +LF R M + GL VTY LI G ++ + ++A V+ MVS G+
Sbjct: 407 GFCKAKRVEEGMELF-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
+ TY I+++GLC ++ +A + + + D + Y +++G+C++G +
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
L GVSPN+ +YN +I+ C K EA ++++MK++G P+ T+ L I+ +
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL--IRAR 583
Query: 617 VR 618
+R
Sbjct: 584 LR 585
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 242/526 (46%), Gaps = 47/526 (8%)
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
RS+ L L + + K G+ P +V L++ +C +R DA + M G+ P+
Sbjct: 131 RSQLSLALAVLAKMM---KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
++TTLI+G +A + D+M++ G +P+ +TY ++ G+ + D++ L+
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K+ E+ +E + V + ++D LC+ ++ + E+ +G + Y +I
Sbjct: 248 KM-EKGKIEAD----VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LC GR+ A+R++ +M +R P+ V ++ +I K+G + +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
TY L+ C +D+A+ + +LM+ K+
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKD----------------------------- 393
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
C +V+T +T+I GFCK V+E +++ ++M + V++TT+I G A
Sbjct: 394 ------CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQA 446
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
D A +F + M G+ P ++TYN L+ GL K + A V+ + + D T
Sbjct: 447 RDCDNAQMVFKQ-MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYEL 560
Y I++EG+C ++E+ + ++ G+ N + Y ++ G CR G+ EA L ++
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ G PN +YN LI + + ++++EM+ G D T
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 203/475 (42%), Gaps = 44/475 (9%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T +H L N+ SEA + G PD T ++ L + +L++ +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
K +V Y+ ++D C ++ DA +F +M N+G P+V +Y++LI+ C+ G
Sbjct: 250 --EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
DA ++ +M+E + PN +T+S LI ++E L +L ++ +R S++ +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD---- 362
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ +++L++ C +E + E + + V Y +I CK R +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +RG V + V Y +IHG + DC TY +L++ LC
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+ KA V + + R S D+ T N
Sbjct: 483 KLAKAMVVFEYLQR-----------------------------------STMEPDIYTYN 507
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I G CK G V++ ++ ++ + K +P+V+++ T+ISG +EA L + M
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCRKGSKEEADSLLKK-MK 565
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
E+G P TYN LIR + + + M S G D++T ++ L D
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 215/508 (42%), Gaps = 30/508 (5%)
Query: 126 AHRIF--FDMKNRGHCPNVVSYTTLINGYC------SVGG---------------IGDAR 162
A R+F ++++ G+ P V S+ L C S G + DA
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 163 KVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFAN 222
+F +M++S P+ + ++ L+ V + E L+ L E+M + + ++
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE----LVISLGEQMQT-LGISHDLYTYSI 123
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
++ CR + + ++ G + V +++ C R A +V +M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
+ P + +IHGL TY +V LC D+D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 343 EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
+LK M + + IYN + M R DV T +++I+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
C G +A ++L DM+ K P+VV+F+ +I + ++ EA L+ M + + P
Sbjct: 304 CNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDP 361
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFW 522
+ TY++LI G R ++A ++ M+S + TY+ +++G C ++EE +
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 523 HDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL 582
++ + + Y ++ G ++ + + A ++V GV PNI +YNIL++ C
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 583 DLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++A + ++++ + PD T+ I+
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 243/519 (46%), Gaps = 9/519 (1%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L S+I ++P +P+ ++++RL ++ M+ G ++ + T +IN
Sbjct: 57 LFESMIQSRP--LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
YC + A V + G EP+++T+S L+ G LEG L +RM VE+
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC----LEGRVSEAVALVDRM-VEM 169
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+ + + L++ LC +G +E + + + G +EV YG +++ LCK G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
+ +M++R S V Y+ +I L KDG TY L+
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
LC+ D ++L+ M+ + + ++ + M+ D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
IT N++I+GFCK + EA ++ D+++ K C PD+V+++ +I+ A RVD+ LF
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R + GL P +TYN L+ G + + N A ++ MVS G+ TY I+++GLCD
Sbjct: 409 -REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++ +A + + +Y I+ G+C + ++A L D GV P++ +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
YN++I C SEA + R+MK++G PD T+ IL
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 233/511 (45%), Gaps = 42/511 (8%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G+ P + + L++ FC+ R +A + M P++V+ +TLING C G +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A + D M+E G +P+ +TY ++ + + G L L+ +M E V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKS----GNSALALDLFRKME-ERNIKASVVQ 247
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
++ ++DSLC++G F++ + E+ +G A+ V Y +I LC G++ A+++ EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
R +P V ++ +I K+G + + TY L++ C +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A ++ LM+ K Y+I + + + + IT NT++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
GFC++G ++ A ++ Q+M+ + P VV++ ++ GL D +++A ++F + M ++
Sbjct: 428 LGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEK-MQKSR 485
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+ + YN +I G+ + +DA+ ++ S+ G+ D TY +++ GLC
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC--------- 536
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+ G+ +EA ++ + G +P+ F+YNILI
Sbjct: 537 --------------------------KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ +++ EMK G + D T +++
Sbjct: 571 LGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 199/477 (41%), Gaps = 48/477 (10%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+++T ++ LC R SEA + G PD T +L RL +S L R +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ S+V Y ++D C DA +F +M+ +G +VV+Y++LI G C+ G
Sbjct: 237 --EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV- 215
D K+ EM+ + P+ +T+S LI ++E L +EL ++ R G+
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-------GIA 347
Query: 216 -KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ +L+D C+E +E ++ + + +G + V Y +I+S CK R R+
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
E+ +G +P+ + YN ++ G + G + TY +L++ LC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+++KA E+ + M + IYNI + S+ + + DV+T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N +I G CK GS+ EA D+ R
Sbjct: 528 YNVMIGGLCKKGSLSEA-------------------------------------DMLFRK 550
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
M E+G P TYN LIR + + M G ADS+T ++++ L D
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 9/333 (2%)
Query: 34 LQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALV 93
+Q+SI + +LC F +A F+ G D T + L+ L ++
Sbjct: 246 VQYSIV--IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
R +I +P +V + L+D F + +A ++ +M RG P+ ++Y +LI+G+C
Sbjct: 304 REMI--GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
+ +A ++FD M+ G EP+ +TYS+LI + + ++ G L ++ + +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP--- 418
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ LV C+ G N + +E+ +G V YG ++D LC G + A
Sbjct: 419 --NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
I +M+K +YN IIHG+ + TY V++ LC
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
+ +A + + M YNI +RA
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 239/513 (46%), Gaps = 42/513 (8%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K G+ P V ++ L++ C+ R +A + M GH P +++ TL+NG C G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ DA + D M+E+G +PN +TY ++ + + EL+ K+ ER ++++++
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDA---- 263
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
++ ++D LC++G + F + E+ +G A+ + Y +I C GR+ A+++ +
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M KR P+ V ++ +I K+G Q TY L++ C
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+++A +++ LM+ K C D++T N
Sbjct: 384 LEEAIQMVDLMISK-----------------------------------GCDPDIMTFNI 408
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+ING+CK +D+ L++ ++M + A + V++ T++ G + +++ A LF M
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQE-MVS 466
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+RP +V+Y L+ GL A ++ + + D Y II+ G+C+ ++++
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
A + + D Y ++ LCR + ++A ++ + G +P+ +YNILI
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
D + A +++ EMK +G D T +++
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 255/519 (49%), Gaps = 9/519 (1%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L R +I ++P +P++++++RL ++ + M+++G ++ + + +IN
Sbjct: 75 LFRDMIQSRP--LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+C + A ++++ G EP+++ ++ L+ G+ E + EL+ +RM VE+
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV----DRM-VEM 187
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+ LV+ LC G ++ + + + G EV YG +++ +CK G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
++ +M++R V Y+ II GL KDG + TY L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
C+ D ++L+ M++++ +++ + + M++ +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
IT N++I+GFCK ++EA++++ D+++ K C PD+++F +I+G A R+D+ +LF
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M G+ VTYN L++G + + A ++ MVS + D +Y I+++GLCD
Sbjct: 427 -REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++E+A + + D +Y I+ G+C + ++A L GV + +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
YNI+I+ C D S+A + R+M + G PD +T+ IL
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 211/495 (42%), Gaps = 53/495 (10%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T L+ LC R SEA + + G P T N L+ L + L+ ++
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV-- 220
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ GF P+ V Y +++ C + A + M+ R + V Y+ +I+G C G +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A +F+EM G + + +TY+ LI G + G +L+ + +R + V
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-----KISPNVVT 335
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F+ L+DS +EG E ++ +E+ +G + Y +ID CK R A ++V M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+G P + +N +I+G K G + TY LV+ C ++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A+++ + M+ + R D+++ ++
Sbjct: 456 VAKKLFQ-----------------------------------EMVSRRVRPDIVSYKILL 480
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G C G +++AL++ + K D+ + +I G+ +A++VD+A+DLF +P G
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKM-ELDIGIYMIIIHGMCNASKVDDAWDLFCS-LPLKG 538
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG-LCDCDQ---- 514
++ YN +I L + + A ++ M +G D TY I++ L D D
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 515 --IEEAKS--FWHDV 525
IEE KS F DV
Sbjct: 599 ELIEEMKSSGFPADV 613
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 247/538 (45%), Gaps = 44/538 (8%)
Query: 75 VLLARLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD 132
V ++LL + ++ + LV S + G +L Y+ +++ C + A I
Sbjct: 66 VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
M G+ P++V+ +L+NG+C I +A + D+M+E G +P+++T++ L+ G+ Q
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
L+ ERM V+ + + +++ LC+ G + + ++ A+
Sbjct: 186 ASEAVALV----ERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
V+Y +IDSLCK A + EM +G P DV
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVF----------------------- 276
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
TY L+ LC+ A +L ML ++ +N + A
Sbjct: 277 -----------TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
M++ +++T N++INGFC +DEA ++ +++ K C PDVV++
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDCLPDVVTYN 384
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
T+I+G A +V + +LF R M GL VTY LI G ++ ++A V+ MVS
Sbjct: 385 TLINGFCKAKKVVDGMELF-RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNE 552
DG+ + TY +++GLC ++E+A + + D + Y + +G+C++G +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L GV P++ +YN +I+ C LK EAY + +MK++G PD T+ L
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/539 (24%), Positives = 250/539 (46%), Gaps = 44/539 (8%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T N+++ L R R+ L ++AL + K G+ PS+V + L++ FC R +A +
Sbjct: 102 TYNIMINCLCR-RSQL-SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M G+ P+ V++TTL++G +A + + M+ G +P+ +TY +I G+ +
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+ + L+ K+ E+ +E + V ++ ++DSLC+ ++ + E+ +G +
Sbjct: 220 EPDLALNLLNKM-EKGKIEAD----VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
Y +I LC GR+ A+R++ +M +R P+ V +N +I K+G + +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY L+ C +D+A+++ LM+ K+
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------------------- 375
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
C DV+T NT+INGFCK V + +++ +DM + + V++
Sbjct: 376 ----------------CLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTY 418
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
TT+I G A+ D A +F + M +G+ P ++TYN L+ GL K + A V+ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
+ D TY I+ EG+C ++E+ + + D Y ++ G C+ G
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 552 EACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
EA ++ + G P+ +YN LI K+ + ++++EM+ D T+ ++
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 195/475 (41%), Gaps = 9/475 (1%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ + L+ C NR SEA + G PD T L+ L + + ALV +
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V G P LV Y +++ C P A + M+ +VV Y+T+I+ C
Sbjct: 197 VV--KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ DA +F EM G+ P+ TYS LI + L+ + ER +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-----KINPN 309
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V F +L+D+ +EG E ++ +E+ + V Y +I+ C R A +I
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M + +P V YN +I+G K + G + TY L+
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D D A+ V K M+ YN L + +S+ D+ T N
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+ G CK G V++ + + + K PDV+++ T+ISG +EA+ LF + M
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK-MK 547
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
E+G P TYN LIR + + + M S D++TY ++ + L D
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 198/462 (42%), Gaps = 7/462 (1%)
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ +A +F EM++S P+ + +S L+ + + + + L+ E+M + + +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD----LVISFGEKMEI-LGVSHNL 100
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ +++ LCR + I ++ G V +++ C R A +V +
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M + G+ P V + ++HGL + TY ++ LC +
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
D A +L M + + IY+ + + M R DV T ++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+ C G +A ++L DML K P+VV+F ++I ++ EA LF M +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDE-MIQ 338
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+ P +VTYN+LI G R ++A +++ MVS D TY ++ G C ++ +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ D+ + + Y ++ G ++ + + A ++V GV PNI +YN L++
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
C +A + ++K+ + PD T+ I+ + K K
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 220/486 (45%), Gaps = 47/486 (9%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A +F+DM +R P + ++ ++ +C+V I A + +M + G PNS+ Y LI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
+ + + +L+ +++ V F +++ LC+ NE ++ +
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVP-----DAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
+G +++ YG +++ LCK+GR A + Y + K P V++N +IHG G
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGR--- 368
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG-VDKTRIYNIYL 364
+D A+ VL M+ G V YN +
Sbjct: 369 --------------------------------LDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M C+ +V + +++GFCK G +DEA VL +M
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL- 455
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
P+ V F +IS R+ EA ++F R MP G +P V T+N+LI GL ++ A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIF-REMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
+ M+S+G+ A++ TY ++ +I+EA+ +++++ D Y +++KGL
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDC 604
CR+G ++A +++ G +P+ S NILIN C + EA + +EM G PD
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 605 VTWRIL 610
VT+ L
Sbjct: 635 VTFNSL 640
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 221/485 (45%), Gaps = 18/485 (3%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T +H+L NR +EA Q G VPD T N ++ L + + +V +++
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
GF P + Y LM+ C R A +F+ + P +V + TLI+G+ + G +
Sbjct: 317 --GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLD 370
Query: 160 DARKVFDEMLES-GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK-- 216
DA+ V +M+ S G+ P+ TY+ LI G +E + E++ + + G K
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-------GCKPN 423
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V ++ LVD C+ G +E + + E+ G V + +I + CK R A I
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM ++G P +N +I GL + + TY L+ A
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ +AR+++ M+ + YN ++ ML I+ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+ING C++G V+EA++ ++M++ + PD+V+F ++I+GL A R+++ +F ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
E G+ P VT+N L+ L K DA + + DG + T++I+++ + + ++
Sbjct: 663 E-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Query: 517 EAKSF 521
+ +
Sbjct: 722 RRRFY 726
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 221/541 (40%), Gaps = 14/541 (2%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S L L N A F L+ P T V++ +L+R +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
K G VP+ V Y L+ R +A ++ +M G P+ ++ +I G C
Sbjct: 244 --TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
I +A K+ + ML G P+ +TY L+ G+ + ++ ++L ++ +
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---------PKPE 352
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHGAARIV 275
+ F L+ G ++ + ++ + +V Y +I K G A ++
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
++M+ +G P+ Y ++ G K G Y + L+ A C
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+ +A E+ + M RK +N + M+ A+ +T
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
NT+IN F + G + EA K++ +M+ + D +++ ++I GL A VD+A LF +++
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVF-QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
+G P ++ N LI GL + +A MV G D T+ ++ GLC +I
Sbjct: 592 -RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
E+ + + + D + ++ LC+ G +AC L E ++ G PN +++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 576 I 576
+
Sbjct: 711 L 711
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 175/391 (44%), Gaps = 10/391 (2%)
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK-R 281
L+ L G F + R+ ++ +G + +E ++ ++ K G R++ EM+
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMR-GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
P+ YN ++ L G+C + T+ V+++A C V ++D
Sbjct: 177 SCEPTFKSYNVVLEILVS-GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
A +L+ M + V + IY + + M C D T N VI
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
G CK ++EA K++ ML+ F APD +++ +++GL RVD A DLF+R+
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGF-APDDITYGYLMNGLCKIGRVDAAKDLFYRIP----- 349
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEAK 519
+P +V +N LI G R +DA V S MV+ GI D TY ++ G + A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
HD+ + + Y ++ G C+ G +EA + L E+ G+ PN +N LI+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C EA +I REM + G PD T+ L
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 24/279 (8%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+ V ++ L+ FC R +A IF +M +G P+V ++ +LI+G C V I A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ +M+ GV N++TY+ LI L+ +++ R+L+ ++ V S + +
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-----VFQGSPLDEITYN 568
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+L+ LCR G ++ + E++ G + +I+ LC+ G A EM R
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH---VFD- 337
G P V +N +I+GL + G G T+ L+ LC V+D
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 338 ---VDKARE------------VLKLMLRKEGVDKTRIYN 361
+D+ E +L+ ++ +E +D+ R YN
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYN 727
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 31 SPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTW 90
SP + + + + LC + +A F L G P + +CN+L+ L RS +
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
+ +++ G P +V ++ L++ C R D +F ++ G P+ V++ TL++
Sbjct: 620 EFQKEMVLR--GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGR 197
C G + DA + DE +E G PN T+S+L++ ++ + L+ R
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/601 (23%), Positives = 255/601 (42%), Gaps = 35/601 (5%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S + L DS F +AH+ + G PD + + + ++ P L+ ++
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ G ++V Y ++ F + + +F M G + ++ L+ C G
Sbjct: 173 --SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL----------------- 199
+ + K+ D++++ GV PN TY++ I+G+ Q +L+G +
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 200 -----MCKLWERMSVEVESGVKVA--------AFANLVDSLCREGFFNEVFRIAEELPCQ 246
+CK + EV G V + L+ C+ G RI +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G + ++ Y +ID LC G + A + E +G P+ +LYN +I GL+ G +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
Q T+ +LV LC + V A ++K+M+ K +NI +
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
ML++ DV T N+++NG CKT ++ ++ + M+ K CAP
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV-EKGCAP 529
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
++ +F ++ L ++DEA L M + P VT+ LI G K + A+ +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEE-MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 487 YSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
+ M + + + TY II+ + + A+ + +++ D + Y ++ G C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
++GN N FL E++++G P++ + +INC C D EA I+ M + GL P+ V
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Query: 606 T 606
Sbjct: 709 N 709
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 229/509 (44%), Gaps = 48/509 (9%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P++ +Y+ +M AH+++ M++RG P+V S+T + +C A ++
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV--AAFAN 222
+ M G E N + Y ++ G +E G EL K+ + SGV + + F
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-------LASGVSLCLSTFNK 221
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
L+ LC++G E ++ +++ +G L Y I LC+ G GA R+V + ++G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
P + YN +I+GL K+ +TY L+ C V A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 343 EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
++ ++N ++ D T ++I+G
Sbjct: 342 RIVG----------DAVFNGFV-------------------------PDQFTYRSLIDGL 366
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
C G + AL + + L GK P+V+ + T+I GL + + EA L + M E GL P
Sbjct: 367 CHEGETNRALALFNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANE-MSEKGLIP 424
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFW 522
V T+N L+ GL K+ +DA G+ M+S G D T+ I++ G ++E A
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 523 HDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
DV+ +G+ D + Y ++L GLC++ F + +V+ G +PN+F++NIL+ C
Sbjct: 485 -DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
EA ++ EMK +NPD VT+ L
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/586 (23%), Positives = 257/586 (43%), Gaps = 47/586 (8%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL 81
F + + PS+ + L A+ N+F G +H T ++L+
Sbjct: 69 FGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 82 R-SRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP 140
R S+ PL L + + K G+ P++V L++ +C +R +A + M G+ P
Sbjct: 128 RRSQLPLALAVLGKMM---KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
N V++ TLI+G +A + D M+ G +P+ +TY V++ G+ + D + L+
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 201 CKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMID 260
K+ + ++E GV + + ++D LC+ ++ + +E+ +G V Y +I
Sbjct: 245 NKMEQG---KLEPGVLI--YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 261 SLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX 320
LC GR+ A+R++ +M +R P ++ +I K+G + +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 321 CDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXX 380
TY L+ C +D+A+++ + M+ K
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK----------------------------- 390
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
C DV+T NT+I GFCK V+E ++V ++M + V++ +I GL
Sbjct: 391 ------HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQ 443
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
A D A ++F + M +G+ P ++TYN L+ GL K + A V+ + +
Sbjct: 444 AGDCDMAQEIF-KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
TY I++EG+C ++E+ + ++ D Y ++ G CR G+ EA E+
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ G PN YN LI + + ++++EM+ G D T
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 238/512 (46%), Gaps = 50/512 (9%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y L++ FC + A + M G+ PN+V+ ++L+NGYC I +A + D+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSL 227
+G +PN++T++ LI G+ E M L +RM V G + + + +V+ L
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNK---ASEAMA-LIDRM---VAKGCQPDLVTYGVVVNGL 231
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
C+ G + F + ++ QG L V +Y +ID LCK A + EM+ +G P+
Sbjct: 232 CKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
V TY L+ LC+ A +L
Sbjct: 291 VV-----------------------------------TYSSLISCLCNYGRWSDASRLLS 315
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
M+ ++ ++ + A M++ ++T +++INGFC
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
+DEA K + + ++ K C PDVV++ T+I G RV+E ++F R M + GL VT
Sbjct: 376 RLDEA-KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF-REMSQRGLVGNTVT 433
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
YN LI+GL++ + A ++ MVSDG+ + TY +++GLC ++E+A + +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
+ Y +++G+C++G + L GV P++ +YN +I+ C K
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 587 EAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
EA + +EMK++G P+ + L I+ ++R
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTL--IRARLR 583
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 234/544 (43%), Gaps = 58/544 (10%)
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
AL ++ ++P PS++ + +L+ + + M+N G N +Y+ LIN
Sbjct: 67 ALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
+C + A V +M++ G EPN +T S L+ G + + L+ +++
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV----- 179
Query: 211 VESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRY 268
+G + F L+ L +E + + + +G + V YG +++ LCK G
Sbjct: 180 --TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 269 HGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVL 328
A ++ +M++ P ++YN II GL K TY L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 329 VEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQC 388
+ LC+ A +L M+E +
Sbjct: 298 ISCLCNYGRWSDASRLLS-----------------------------------DMIERKI 322
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
DV T + +I+ F K G + EA K L D ++ + P +V+++++I+G R+DEA
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEK-LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+F ++ ++ P VVTYN LI+G K KR + V+ M G+ ++ TY I+++G
Sbjct: 382 QMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 509 L---CDCDQIEEA-KSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
L DCD +E K D + P+ + Y +L GLC++G +A L S
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIM----TYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
+ P I++YNI+I C + + + + G+ PD V + + I G RK + E
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM--ISGFCRKGSKEE 554
Query: 625 YQSL 628
+L
Sbjct: 555 ADAL 558
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 200/508 (39%), Gaps = 75/508 (14%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++++ L+ C S R SEA +G P+ T N L+ L + AL+ +
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 97 IVA--KPGFV-------------------------------PSLVNYHRLMDQFCVFRRP 123
+ +P V P ++ Y+ ++D C ++
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 124 CDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
DA +F +M+ +G PNVV+Y++LI+ C+ G DA ++ +M+E + P+ T+S L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
I ++E L KL++ M V+ + +++L++ C +E ++ E +
Sbjct: 333 IDAFVKEGKLVEAE----KLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+ + V Y +I CK R + EM +RG V + V YN +I GL + GDC
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
+ TY L++ LC ++KA V + + R + YNI
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+ ++ + DV+ NT+I+GFC+ GS +EA
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA------------ 555
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
D + M E+G P YN LIR + +
Sbjct: 556 -------------------------DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+ M S G D++T ++ L D
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHD 618
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 240/534 (44%), Gaps = 47/534 (8%)
Query: 79 RLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR 136
+LL + + + LV SL + G L Y ++ FC + A + M
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ P++V+ ++L+NGYC I DA + D+M+E G +P++ T++ LI G+
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
L+ ++ +R + + +V+ LC+ G + + ++ A V++
Sbjct: 208 VALVDQMVQR-----GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
+IDSLCK A + EM+ +G P+ V YN +I+
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN--------------------- 301
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
LC+ A +L ML K+ +N + A
Sbjct: 302 --------------CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
M++ D IT N +INGFC +DEA ++ + M+ K C P++ ++ T+I+
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV-SKDCLPNIQTYNTLIN 406
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG 496
G RV++ +LF R M + GL VTY +I+G ++ + A V+ MVS+ +
Sbjct: 407 GFCKCKRVEDGVELF-REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
D TY+I++ GLC +++ A + + + F+Y +++G+C++G EA
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L + P++ +YN +I+ C L EA + R+MK++G P+ T+ L
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/544 (22%), Positives = 241/544 (44%), Gaps = 50/544 (9%)
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
RS+ L L + + K G+ P +V L++ +C +R DA + M G+ P+
Sbjct: 131 RSQLSLALAVLAKMM---KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
++TTLI+G +A + D+M++ G +P+ +TY ++ G+ + D++ L+
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K+ E ++ V F ++DSLC+ + E+ +G V Y +I+
Sbjct: 248 KM-EAARIKAN----VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LC GR+ A+R++ M ++ P+ V +N +I K+G + +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
TY +L+ C +D+A+++ K M+ K+
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKD----------------------------- 393
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
C ++ T NT+INGFCK V++ +++ ++M + V++TT+I G A
Sbjct: 394 ------CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG-NTVTYTTIIQGFFQA 446
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
D A +F + M N + ++TY+ L+ GL + + A ++ + + +
Sbjct: 447 GDCDSAQMVFKQ-MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y ++EG+C ++ EA W S D Y ++ GLC EA ++
Sbjct: 506 YNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKI--QGKVRK 619
+ G PN +YN LI ++ + ++++EM+ +G D T ++ + G++ K
Sbjct: 563 EDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDK 622
Query: 620 QTLS 623
L+
Sbjct: 623 SFLN 626
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 206/511 (40%), Gaps = 84/511 (16%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++++ L+ C S R S+A + G PD T L+ L + ALV +
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 97 IVAKPGFVPSLVNY-----------------------------------HRLMDQFCVFR 121
+ + G P LV Y + ++D C +R
Sbjct: 215 V--QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
A +F +M+ +G PNVV+Y +LIN C+ G DA ++ MLE + PN +T++
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
LI +E L +L ++ +R S++ ++ + L++ C +E ++ +
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDT----ITYNLLINGFCMHNRLDEAKQMFK 387
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ + L Y +I+ CK R + EM +RG V + V Y II G + G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
DC TY +L+ LC +D A + K
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK--------------- 492
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
YL+ +S+ ++ NT+I G CK G V EA D+
Sbjct: 493 -YLQ-------------------KSEMELNIFIYNTMIEGMCKAGKVGEAW----DLFCS 528
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG-LYKLKRP 480
PDVV++ T+ISGL + EA DLF R M E+G P TYN LIR L R
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLF-RKMKEDGTLPNSGTYNTLIRANLRDCDRA 587
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
A + M S G D++T +++ L D
Sbjct: 588 ASA-ELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 213/504 (42%), Gaps = 12/504 (2%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
DA +F DM P++V + L++ + + ++M G+ + TYS+ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
+ L ++ K+ ++ E + + ++L++ C ++ + +++
Sbjct: 126 NCFCRRSQLSLALAVLAKMM-KLGYEPD----IVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
G + + +I L + A +V +M +RG P V Y +++GL K GD
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ ++++LC V+ A ++ M K YN +
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
+MLE + +V+T N +I+ F K G + EA K+ ++M+ +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSI 359
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
PD +++ +I+G R+DEA +F ++ ++ L P + TYN LI G K KR D
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGV 418
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
++ M G+ ++ TYT I++G + A+ + ++ D Y+ +L GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDC 604
C G + A L S + NIF YN +I C EA+ + + + PD
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535
Query: 605 VTWRILHKIQGKVRKQTLSEYQSL 628
VT+ + I G K+ L E L
Sbjct: 536 VTYNTM--ISGLCSKRLLQEADDL 557
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 257/577 (44%), Gaps = 18/577 (3%)
Query: 40 TTLHALC-DSN-RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI 97
T L +LC DSN + A F ++ SGS N L+A+L+RSR ++ R ++
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AGNNLMAKLVRSRNHELAFSFYRKML 99
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
F+ + V+ L++ + R+ A + M RG NV ++ L+ G C
Sbjct: 100 ETDT-FI-NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV-- 215
G A + EM + + P+ +Y+ +IRG + ++LE EL ++ SG
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-------KGSGCSW 210
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ + L+D+ C+ G +E +E+ G A+ VVY +I C G +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
E+ +RG P + YN +I G K G + +TY L++ LC V
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+A ++L LM+ K+ YNI + M + + R D IT
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 396 NTVINGFCKTGSVDEALKVLQDMLM-GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N ++ G C G +DEA K+L ML + PDV+S+ +I GL R+ +A D++ +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
+ + G V T N L+ K N A ++ + I +S TYT +++G C
Sbjct: 451 VEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
+ AK + F Y +L LC+ G+ ++A E+ P++ S+NI
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 575 LINCACHL-DLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+I+ + D+KS A ++ M + GL+PD T+ L
Sbjct: 570 MIDGSLKAGDIKS-AESLLVGMSRAGLSPDLFTYSKL 605
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 207/464 (44%), Gaps = 13/464 (2%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
SLV + L+D FC + +A +MK G ++V YT+LI G+C G + + +F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANL 223
DE+LE G P ++TY+ LIRG + L+ E ++E M +E GV+ V + L
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASE----IFEFM---IERGVRPNVYTYTGL 323
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+D LC G E ++ + + V Y +I+ LCK G A IV MKKR
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH--TYKVLVEALCHVFDVDKA 341
P ++ YN ++ GL GD + +Y L+ LC + +A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
++ L++ K G NI L + + +S+ + T +I+G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
FCKTG ++ A +L M + + P V + ++S L +D+A+ LF + +N
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSEL-QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF- 561
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P VV++N +I G K A + M G+ D TY+ ++ ++EA SF
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ ++ D + ++LK G ++ + +LVD +
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 169/404 (41%), Gaps = 44/404 (10%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
V + G P + Y+ L+ FC + +A IF M RG PNV +YT LI+G C VG
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+A ++ + M+E EPN++TY+++I
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIII--------------------------------- 359
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ LC++G + I E + + + + + Y ++ LC G A++++Y
Sbjct: 360 -------NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 278 M-KKRGFVPSDVL-YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
M K + DV+ YN +IHGL K+ + T +L+ +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
DV+KA E+ K + + V + Y + M S+ + V
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
N +++ CK GS+D+A ++ ++M PDVVSF +I G L A + A L M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIMIDGSLKAGDIKSAESLLVG-M 590
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
GL P + TY+ LI KL ++A + MV G D+
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 246/566 (43%), Gaps = 49/566 (8%)
Query: 54 AHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRL 113
A F + G P TCN+LL L+R+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANE---------------------------- 241
Query: 114 MDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV 173
F++ C+A FD+ +G P+V +TT IN +C G + +A K+F +M E+GV
Sbjct: 242 ------FQKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 291
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREG 231
PN +T++ +I G+ + G + E+M VE G++ + ++ LV L R
Sbjct: 292 APNVVTFNTVIDGL----GMCGRYDEAFMFKEKM---VERGMEPTLITYSILVKGLTRAK 344
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+ + + +E+ +G +VY +IDS + G + A I M +G + YN
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G K+G + ++ ++ LC D A + ML +
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
+ + L D T N +++G C+ G +DEA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++ Q ++G+ C D VS+ T+ISG ++DEAF +F M + GL+P TY+ LI
Sbjct: 525 FRI-QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILI 582
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
GL+ + + +A + +G+ D TY+++++G C ++ EE + F+ +++ +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ VY +++ CRSG + A ++ G+SPN +Y LI + EA +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 592 VREMKKNGLNPDCVTWRILHKIQGKV 617
EM+ GL P+ + L GK+
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKL 728
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/553 (22%), Positives = 226/553 (40%), Gaps = 50/553 (9%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T ++A C + EA + FS +G P+ T N ++ L + + ++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV- 322
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G P+L+ Y L+ +R DA+ + +M +G PNV+ Y LI+ + G +
Sbjct: 323 -ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
A ++ D M+ G+ S TY+ LI+G + + L L E +S+ V
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL---LKEMLSIGF--NVNQG 436
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+F +++ LC F+ R E+ + + +I LCK G++ A + ++
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDC-----------MRGYQXXXXXXXXXXXXC------ 321
+GFV N ++HGL + G RG C
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 322 ------------------DHTYKVLVEALCHVFDVDKAREVLKLM---LRKEGVDKTRIY 360
++TY +L+ C +F+++K E ++ R + Y
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
++ + M+ + + + N +I +C++G + AL++ +DM
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-K 672
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
K +P+ ++T++I G+ +RV+EA LF + E GL P V Y ALI G KL +
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM 731
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+ M S + + TYT+++ G + EA +++ + D+ Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 541 LKGLCRSGNFNEA 553
+ G + G EA
Sbjct: 792 IYGYLKQGGVLEA 804
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 196/533 (36%), Gaps = 77/533 (14%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T + L R+ EA + G P T ++L+ L R++ + +++ +
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM--T 357
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K GF P+++ Y+ L+D F A I M ++G +Y TLI GYC G
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 160 DARKVFDEMLESGVEPNSLTYSVLI---------------RGVLQERDLEGGRELMCKLW 204
+A ++ EML G N +++ +I G + R++ G L+ L
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 205 E------RMSVEVESGVKVAAFANLVDS---------LCREGFFNEVFRIAEELPCQGSL 249
+ S +E + +VD+ LC G +E FRI +E+ +G +
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ V Y +I C + A + EM KRG P + Y+ +I GL Q
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
+TY V+++ C ++ +E M+ K T +YN +RA
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM--------- 420
M + T ++I G V+EA + ++M M
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 421 -------------------------GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
K P+ +++T +I G V EA L + M
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE-M 776
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
E G+ P +TY I G K +AF G+D Y I+EG
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEG 819
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 17/277 (6%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---RSRTPLQTWALV 93
S T + C + EA + G PD+ T ++L+ L + +Q W
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
+ + G +P + Y ++D C R + F +M ++ PN V Y LI YC
Sbjct: 602 K-----RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G + A ++ ++M G+ PNS TY+ LI+G+ +E + L+E M +E
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK----LLFEEMRME--- 709
Query: 214 GVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
G++ V + L+D + G +V + E+ + ++ Y MI + G A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+R++ EM+++G VP + Y I+G K G + ++
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 6/173 (3%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRS--RTPLQTWALV 93
++ + + C + R E + F ++ P+ V+ L+R+ R+ + AL
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN----TVVYNHLIRAYCRSGRLSMALE 666
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
+ G P+ Y L+ + R +A +F +M+ G PNV YT LI+GY
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+G + + EM V PN +TY+V+I G ++ ++ L+ ++ E+
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 246/566 (43%), Gaps = 49/566 (8%)
Query: 54 AHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRL 113
A F + G P TCN+LL L+R+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANE---------------------------- 241
Query: 114 MDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV 173
F++ C+A FD+ +G P+V +TT IN +C G + +A K+F +M E+GV
Sbjct: 242 ------FQKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 291
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREG 231
PN +T++ +I G+ + G + E+M VE G++ + ++ LV L R
Sbjct: 292 APNVVTFNTVIDGL----GMCGRYDEAFMFKEKM---VERGMEPTLITYSILVKGLTRAK 344
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+ + + +E+ +G +VY +IDS + G + A I M +G + YN
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G K+G + ++ ++ LC D A + ML +
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
+ + L D T N +++G C+ G +DEA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++ Q ++G+ C D VS+ T+ISG ++DEAF +F M + GL+P TY+ LI
Sbjct: 525 FRI-QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILI 582
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
GL+ + + +A + +G+ D TY+++++G C ++ EE + F+ +++ +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ VY +++ CRSG + A ++ G+SPN +Y LI + EA +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 592 VREMKKNGLNPDCVTWRILHKIQGKV 617
EM+ GL P+ + L GK+
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKL 728
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/553 (22%), Positives = 226/553 (40%), Gaps = 50/553 (9%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T ++A C + EA + FS +G P+ T N ++ L + + ++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV- 322
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G P+L+ Y L+ +R DA+ + +M +G PNV+ Y LI+ + G +
Sbjct: 323 -ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
A ++ D M+ G+ S TY+ LI+G + + L L E +S+ V
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL---LKEMLSIGF--NVNQG 436
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+F +++ LC F+ R E+ + + +I LCK G++ A + ++
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDC-----------MRGYQXXXXXXXXXXXXC------ 321
+GFV N ++HGL + G RG C
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 322 ------------------DHTYKVLVEALCHVFDVDKAREVLKLM---LRKEGVDKTRIY 360
++TY +L+ C +F+++K E ++ R + Y
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
++ + M+ + + + N +I +C++G + AL++ +DM
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-K 672
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
K +P+ ++T++I G+ +RV+EA LF + E GL P V Y ALI G KL +
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQM 731
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+ M S + + TYT+++ G + EA +++ + D+ Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 541 LKGLCRSGNFNEA 553
+ G + G EA
Sbjct: 792 IYGYLKQGGVLEA 804
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 196/533 (36%), Gaps = 77/533 (14%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T + L R+ EA + G P T ++L+ L R++ + +++ +
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM--T 357
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K GF P+++ Y+ L+D F A I M ++G +Y TLI GYC G
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 160 DARKVFDEMLESGVEPNSLTYSVLI---------------RGVLQERDLEGGRELMCKLW 204
+A ++ EML G N +++ +I G + R++ G L+ L
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 205 E------RMSVEVESGVKVAAFANLVDS---------LCREGFFNEVFRIAEELPCQGSL 249
+ S +E + +VD+ LC G +E FRI +E+ +G +
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ V Y +I C + A + EM KRG P + Y+ +I GL Q
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
+TY V+++ C ++ +E M+ K T +YN +RA
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM--------- 420
M + T ++I G V+EA + ++M M
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 421 -------------------------GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
K P+ +++T +I G V EA L + M
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE-M 776
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
E G+ P +TY I G K +AF G+D Y I+EG
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEG 819
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 17/277 (6%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---RSRTPLQTWALV 93
S T + C + EA + G PD+ T ++L+ L + +Q W
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
+ + G +P + Y ++D C R + F +M ++ PN V Y LI YC
Sbjct: 602 K-----RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G + A ++ ++M G+ PNS TY+ LI+G+ +E + L+E M +E
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK----LLFEEMRME--- 709
Query: 214 GVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
G++ V + L+D + G +V + E+ + ++ Y MI + G A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+R++ EM+++G VP + Y I+G K G + ++
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 6/173 (3%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRS--RTPLQTWALV 93
++ + + C + R E + F ++ P+ V+ L+R+ R+ + AL
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN----TVVYNHLIRAYCRSGRLSMALE 666
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
+ G P+ Y L+ + R +A +F +M+ G PNV YT LI+GY
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+G + + EM V PN +TY+V+I G ++ ++ L+ ++ E+
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 233/477 (48%), Gaps = 12/477 (2%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+ + +M G+ P+++ TTLI G+C +G A K+ + + SG P+ +TY+V+I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
G + ++ ++ +RMSV + V + ++ SLC G + + + +
Sbjct: 180 SGYCKAGEINNALSVL----DRMSVSPD----VVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+ + + Y +I++ C+ A +++ EM+ RG P V YN +++G+ K+G
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ T+ +++ ++C A ++L MLRK +NI +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M + C+ + ++ N +++GFCK +D A++ L+ M+ + C
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGC 410
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
PD+V++ T+++ L +V++A ++ ++ + G P ++TYN +I GL K + A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKG 543
+ M + + D+ TY+ +V GL +++EA F+H+ GI N V + +I+ G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLG 528
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
LC+S + A FL +++ G PN SY ILI + + EA +++ E+ GL
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 214/487 (43%), Gaps = 47/487 (9%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T + C + +A + I SG+VPD T NV+++ ++ +++ + V
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ P +V Y+ ++ C + A + M R P+V++YT LI C G+
Sbjct: 201 S-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
G A K+ DEM + G P+ +TY+VL+ G+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGI------------------------------- 284
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
C+EG +E + ++P G + + ++ S+C GR+ A +++ +M
Sbjct: 285 ---------CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
++GF PS V +N +I+ L + G R +Y L+ C +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
D+A E L+ M+ + YN L A + C +IT NTV
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
I+G K G +A+K+L +M K PD +++++++ GL +VDEA FH
Sbjct: 456 IDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERM 513
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
G+RP VT+N+++ GL K ++ + A M++ G + T+YTI++EGL +EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 519 KSFWHDV 525
+++
Sbjct: 574 LELLNEL 580
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 5/389 (1%)
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
N + + R G E F+ E + G++ + + +I C++G+ AA+I+ ++
Sbjct: 107 NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G VP + YN +I G K G+ TY ++ +LC + +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQA 223
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
EVL ML+++ Y I + A M + C DV+T N ++NG
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
CK G +DEA+K L DM C P+V++ ++ + R +A L ++ G
Sbjct: 284 ICKEGRLDEAIKFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML-RKGFS 341
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P VVT+N LI L + A + M G +S +Y ++ G C +++ A +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
++ D Y +L LC+ G +A L +L G SP + +YN +I+
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+A +++ EM+ L PD +T+ L
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 465 VTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHD 524
V N +R + + + F +MV G D T ++ G C + +A
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 525 VIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDL 584
+ + D Y ++ G C++G N A L + VSP++ +YN ++ C
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 585 KSEAYQIVREMKKNGLNPDCVTWRIL 610
+A +++ M + PD +T+ IL
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTIL 245
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 240/507 (47%), Gaps = 10/507 (1%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y+ L++ F + +++ +M CPN+ +Y ++NGYC +G + +A + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
E+G++P+ TY+ LI G Q +DL+ K++ M ++ +V A+ +L+ LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSA----FKVFNEMPLKGCRRNEV-AYTHLIHGLCV 300
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
+E + ++ Y +I SLC R A +V EM++ G P+
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
Y +I L + + TY L+ C ++ A +V++LM
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
++ TR YN ++ MLE + DV+T N++I+G C++G+ D
Sbjct: 421 SRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
A ++L ++ + PD ++T++I L + RV+EA DLF + + G+ P VV Y A
Sbjct: 480 SAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS-LEQKGVNPNVVMYTA 537
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
LI G K + ++A + M+S +S T+ ++ GLC +++EA + + +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKI 596
Query: 530 GIHDNFVYAAIL-KGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
G+ IL L + G+F+ A +++ SG P+ +Y I C +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 589 YQIVREMKKNGLNPDCVTWRILHKIQG 615
++ +M++NG++PD T+ L K G
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYG 683
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/588 (25%), Positives = 244/588 (41%), Gaps = 64/588 (10%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H LC + R EA F P RT VL+ L S + LV+ + +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM--EET 352
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P++ Y L+D C + A + M +G PNV++Y LINGYC G I DA
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
V + M + PN+ TY+ LI+G + ++ ++ K+ ER + V +
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLP-----DVVTYN 466
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+L+D CR G F+ +R+ + +G + ++ Y MIDSLCK R A + ++++
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G P+ V+Y +I G K G VD+A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGK-----------------------------------VDEA 551
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+L+ ML K + + +N + M++ + V T +I+
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
K G D A Q ML PD ++TT I R+ +A D+ + M ENG+
Sbjct: 612 LLKDGDFDHAYSRFQQML-SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK-MRENGVS 669
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD-------- 513
P + TY++LI+G L + N AF V M G T+ +++ L +
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 514 ----------QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH-FLYELVD 562
+ + ++ S + Y ++ G+C GN A F + +
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G+SP+ +N L++C C L +EA ++V +M G P + ++L
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 225/532 (42%), Gaps = 51/532 (9%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ + G P Y L+ +C + A ++F +M +G N V+YT LI+G C
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVL-QERDLEGGRELMCKLWERMSVEVESGVK 216
I +A +F +M + P TY+VLI+ + ER E L + M E+G+K
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA-----LNLVKEME---ETGIK 355
Query: 217 --VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ + L+DSLC + F + + ++ +G + + Y +I+ CK G A +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
V M+ R P+ YN +I G K + + TY L++ C
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+ D A +L LM + V Y + + S+ + +V+
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
+I+G+CK G VDEA +L+ ML K C P+ ++F +I GL ++ EA L
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEK 592
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M + GL+P V T LI L K + A+ + M+S G D+ TYT ++ C
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC---- 648
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
R G +A + ++ ++GVSP++F+Y+
Sbjct: 649 -------------------------------REGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTW--RILHKIQGKVRKQTLSE 624
LI L + A+ +++ M+ G P T+ I H ++ K KQ SE
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 193/468 (41%), Gaps = 26/468 (5%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ C SN +A + L +PD T N L+ RS + L+ ++
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS--LMNDR 491
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G VP Y ++D C +R +A +F ++ +G PNVV YT LI+GYC G + +A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ ++ML PNSLT++ LI G+ + L+ L E V++ V+
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-----TLLEEKMVKIGLQPTVSTDT 606
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ L ++G F+ + +++ G+ + Y I + C+ GR A ++ +M++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G P Y+ +I G G + HT+ L++ H+ ++
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK---HLLEMKYG 723
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
++ +G + L A M+E + + +I G
Sbjct: 724 KQ--------KGSEPE------LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
C+ G++ A KV M + +P + F ++S + +EA + ++ L
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL- 828
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
P + + LI GLYK V+ +++ G D + II++G+
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
C+ + DE ++ +++G + T+++ L VDE ++ ++ E+ +
Sbjct: 165 LCRKMNKDERFELKYKLIIG--------CYNTLLNSLARFGLVDEMKQVYMEML-EDKVC 215
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P + TYN ++ G KL +A S +V G+ D TYT ++ G C ++ A
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
++++ + Y ++ GLC + +EA ++ D P + +Y +LI C
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ KSEA +V+EM++ G+ P+ T+ +L
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVL 364
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 240/526 (45%), Gaps = 20/526 (3%)
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
++ ++P + V+ ++++ F RP A ++ M+ R N+ S+ LI +C
Sbjct: 97 MVRSRPFYTA--VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE----- 210
+ + F ++ + G +P+ +T++ L+ G+ E + L + E +E
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 211 ---VESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV 265
VE G+ V F L++ LC EG E + ++ +G + V YG +++ +CK+
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 266 GRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTY 325
G A ++ +M++ P V+Y+ II L KDG TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
+++ C A+ +L+ M+ +E +N + A ML
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
D +T N++I GFCK D+A K + D++ +PDVV+F T+I A RVD
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA-KHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 449
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
E L R + GL TYN LI G ++ N A ++ M+S G+ D+ T I+
Sbjct: 450 EGMQLL-REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
+ G C+ +++EEA + +VI S I D Y I+ G+C+ +EA L G
Sbjct: 509 LYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
V P++ +YN++I+ C S+A + +MK NG PD T+ L
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 225/536 (41%), Gaps = 68/536 (12%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T LH LC +R SEA F + +G L+ AL ++
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGF--------------------LEAVALFDQMV-- 218
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ G P ++ ++ L++ C+ R +A + M +G +VV+Y T++NG C +G
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
A + +M E+ ++P+ + YS +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAII----------------------------------- 303
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
D LC++G ++ + E+ +G Y MID C GR+ A R++ +M
Sbjct: 304 -----DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+R P + +N +I K+G + TY ++ C D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A+ + LM + V I ++Y RA L A+ T NT+I
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL----VANTTTYNTLI 474
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+GFC+ +++ A + Q+M+ C PD ++ ++ G + +++EA +LF V+ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELF-EVIQMSK 532
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+ V YN +I G+ K + ++A+ ++ S+ G+ D TY +++ G C I +A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+H + DN Y +++G ++G +++ + E+ +G S + F+ ++
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 174/412 (42%), Gaps = 17/412 (4%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T ++ +C A S + PD + ++ RL + L ++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML- 323
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G P++ Y+ ++D FC F R DA R+ DM R P+V+++ LI+ G +
Sbjct: 324 -EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
+A K+ DEML + P+++TY+ +I G + + + + ++ + V
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF---------DLMASPDVV 433
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
F ++D CR +E ++ E+ +G +A Y +I C+V + A + EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
G P + N +++G ++ + Y +++ +C V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 339 DKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
D+A ++ L GV+ + YN+ + M ++ D T NT
Sbjct: 554 DEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT-TVISGLLDATRVDEAF 448
+I G K G +D++++++ +M F +FT +++ L+ R+D++F
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGFSGD---AFTIKMVADLITDGRLDKSF 661
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 238/526 (45%), Gaps = 20/526 (3%)
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
++ ++P + + V+ ++++ F RP A ++ M+ R N+ S+ LI +C
Sbjct: 97 MVRSRPFY--TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE----- 210
+ + F ++ + G +P+ +T++ L+ G+ E + L + E +E
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 211 ---VESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV 265
VE G+ V F L++ LC EG E + ++ +G + V YG +++ +CK+
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 266 GRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTY 325
G A ++ +M++ P V+Y+ II L KDG TY
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
+++ C A+ +L+ M+ +E +N + A ML
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
D +T N++I GFCK D+A + M +PDVV+F T+I A RVD
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVD 449
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
E L R + GL TYN LI G ++ N A ++ M+S G+ D+ T I+
Sbjct: 450 EGMQLL-REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
+ G C+ +++EEA + +VI S I D Y I+ G+C+ +EA L G
Sbjct: 509 LYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
V P++ +YN++I+ C S+A + +MK NG PD T+ L
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 227/546 (41%), Gaps = 68/546 (12%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T LH LC +R SEA F + +G L+ AL +
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGF--------------------LEAVALFDQM 217
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ + G P ++ ++ L++ C+ R +A + M +G +VV+Y T++NG C +G
Sbjct: 218 V--EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A + +M E+ ++P+ + YS +I
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAII-------------------------------- 303
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
D LC++G ++ + E+ +G Y MID C GR+ A R++
Sbjct: 304 --------DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M +R P + +N +I K+G + TY ++ C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D A+ + LM + V I ++Y RA L A+ T N
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL----VANTTTYN 471
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+I+GFC+ +++ A + Q+M+ C PD ++ ++ G + +++EA +LF V+
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFE-VIQ 529
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ + V YN +I G+ K + ++A+ ++ S+ G+ D TY +++ G C I
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+A +H + DN Y +++G ++G +++ + E+ +G S + F+ +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAE 649
Query: 577 NCACHL 582
C +
Sbjct: 650 EIICRV 655
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 209/471 (44%), Gaps = 19/471 (4%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S +H +C R EAH + G PD + + ++ R + W L+
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE-- 305
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ + G P+ Y ++ C + +A F +M +G P+ V YTTLI+G+C G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL-EGGR---ELMCKLWERMSVEVE 212
I A K F EM + P+ LTY+ +I G Q D+ E G+ E+ CK E SV
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV--- 422
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
F L++ C+ G + FR+ + G V Y +ID LCK G A
Sbjct: 423 ------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+++EM K G P+ YN I++GL K G+ + TY L++A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
C ++DKA+E+LK ML K G+ T + +N+ + ML +
Sbjct: 537 CKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
T N+++ +C ++ A + +DM + PD ++ ++ G A + EA+ LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMC-SRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
M G V TY+ LI+G K K+ +A V+ M +G+ AD +
Sbjct: 655 QE-MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/569 (23%), Positives = 241/569 (42%), Gaps = 35/569 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L D EA + F L G V +CNV L RL + T A++ +
Sbjct: 182 FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT-AIIVFREFPEV 240
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G ++ +Y+ ++ C R +AH + M+ +G+ P+V+SY+T++NGYC G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW---ERMSVEVESGV--K 216
K+ + M G++PNS Y +I G+L +CKL E S + G+
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSII-GLLCR---------ICKLAEAEEAFSEMIRQGILPD 350
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L+D C+ G + E+ + + + Y +I C++G A ++ +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +G P V + +I+G K G ++ TY L++ LC
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D+D A E+L M + YN + + AD +T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+++ +CK+G +D+A ++L++ML GK P +V+F +++G +++ L + ++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ G+ P T+N+L++ A +Y M S G+G D TY +V+G C ++
Sbjct: 590 K-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
EA + ++ Y+ ++KG + F EA ++ G++ +
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-------- 700
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCV 605
E + + K G PD +
Sbjct: 701 ---------KEIFDFFSDTKYKGKRPDTI 720
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 214/493 (43%), Gaps = 83/493 (16%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F + G C NV SY +I+ C +G I +A + M G P+ ++YS ++ G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQ 246
+ +L+ K+W+ + V G+K ++ +++ LCR E E+ Q
Sbjct: 293 RFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G L + VVY +ID CK G A++ YEM R P DVL
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP-DVL----------------- 387
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
TY ++ C + D+ +A ++ M K G++
Sbjct: 388 -----------------TYTAIISGFCQIGDMVEAGKLFHEMFCK-GLE----------- 418
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
D +T +ING+CK G + +A +V M+ C+P
Sbjct: 419 -----------------------PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSP 454
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
+VV++TT+I GL +D A +L H M + GL+P + TYN+++ GL K +A +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLC 545
+ G+ AD+ TYT +++ C ++++A+ +++ G+ V + ++ G C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFC 572
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
G + L ++ G++PN ++N L+ C + A I ++M G+ PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 606 TWRILHKIQGKVR 618
T+ L K K R
Sbjct: 633 TYENLVKGHCKAR 645
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DVI+ +TV+NG+C+ G +D+ K+++ ++ K P+ + ++I L ++ EA +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F M G+ P V Y LI G K A + M S I D TYT I+ G C
Sbjct: 339 FSE-MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ EA +H++ D+ + ++ G C++G+ +A ++ +G SPN+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSI 630
+Y LI+ C A +++ EM K GL P+ T+ + + G + + E L
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI--VNGLCKSGNIEEAVKLVG 515
Query: 631 NYEGQDMD 638
+E ++
Sbjct: 516 EFEAAGLN 523
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 209/471 (44%), Gaps = 19/471 (4%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S +H +C R EAH + G PD + + ++ R + W L+
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE-- 305
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ + G P+ Y ++ C + +A F +M +G P+ V YTTLI+G+C G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL-EGGR---ELMCKLWERMSVEVE 212
I A K F EM + P+ LTY+ +I G Q D+ E G+ E+ CK E SV
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV--- 422
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
F L++ C+ G + FR+ + G V Y +ID LCK G A
Sbjct: 423 ------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+++EM K G P+ YN I++GL K G+ + TY L++A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
C ++DKA+E+LK ML K G+ T + +N+ + ML +
Sbjct: 537 CKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
T N+++ +C ++ A + +DM + PD ++ ++ G A + EA+ LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMC-SRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
M G V TY+ LI+G K K+ +A V+ M +G+ AD +
Sbjct: 655 QE-MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/569 (23%), Positives = 241/569 (42%), Gaps = 35/569 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L D EA + F L G V +CNV L RL + T A++ +
Sbjct: 182 FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT-AIIVFREFPEV 240
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G ++ +Y+ ++ C R +AH + M+ +G+ P+V+SY+T++NGYC G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW---ERMSVEVESGV--K 216
K+ + M G++PNS Y +I G+L +CKL E S + G+
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSII-GLLCR---------ICKLAEAEEAFSEMIRQGILPD 350
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L+D C+ G + E+ + + + Y +I C++G A ++ +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +G P V + +I+G K G ++ TY L++ LC
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D+D A E+L M + YN + + AD +T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+++ +CK+G +D+A ++L++ML GK P +V+F +++G +++ L + ++
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ G+ P T+N+L++ A +Y M S G+G D TY +V+G C ++
Sbjct: 590 K-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
EA + ++ Y+ ++KG + F EA ++ G++ +
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-------- 700
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCV 605
E + + K G PD +
Sbjct: 701 ---------KEIFDFFSDTKYKGKRPDTI 720
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 214/493 (43%), Gaps = 83/493 (16%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F + G C NV SY +I+ C +G I +A + M G P+ ++YS ++ G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQ 246
+ +L+ K+W+ + V G+K ++ +++ LCR E E+ Q
Sbjct: 293 RFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G L + VVY +ID CK G A++ YEM R P DVL
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP-DVL----------------- 387
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
TY ++ C + D+ +A ++ M K G++
Sbjct: 388 -----------------TYTAIISGFCQIGDMVEAGKLFHEMFCK-GLE----------- 418
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
D +T +ING+CK G + +A +V M+ C+P
Sbjct: 419 -----------------------PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSP 454
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
+VV++TT+I GL +D A +L H M + GL+P + TYN+++ GL K +A +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLC 545
+ G+ AD+ TYT +++ C ++++A+ +++ G+ V + ++ G C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFC 572
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
G + L ++ G++PN ++N L+ C + A I ++M G+ PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 606 TWRILHKIQGKVR 618
T+ L K K R
Sbjct: 633 TYENLVKGHCKAR 645
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DVI+ +TV+NG+C+ G +D+ K+++ ++ K P+ + ++I L ++ EA +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F M G+ P V Y LI G K A + M S I D TYT I+ G C
Sbjct: 339 FSE-MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ EA +H++ D+ + ++ G C++G+ +A ++ +G SPN+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSI 630
+Y LI+ C A +++ EM K GL P+ T+ + + G + + E L
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI--VNGLCKSGNIEEAVKLVG 515
Query: 631 NYEGQDMD 638
+E ++
Sbjct: 516 EFEAAGLN 523
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 239/557 (42%), Gaps = 27/557 (4%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV--AKPGFVPSLVNYHRLMDQFCVFRR 122
G P R+ N LL + ++ W V SL G P+L Y+ L+ C ++
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQ----WVKVESLFAYFETAGVAPNLQTYNVLIKMSCK-KK 163
Query: 123 PCDAHRIFFD-MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
+ R F D M G P+V SY+T+IN G + DA ++FDEM E GV P+ Y+
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+LI G L+E+D + EL W+R+ + V ++ L + G ++ +I E
Sbjct: 224 ILIDGFLKEKDHKTAMEL----WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ + Y +I LC G A + E+ +R V YN ++ G + G
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
+ +Y +L++ L +D+A + +LM K Y
Sbjct: 340 KIKESLELWRIMEHKNSVNI-VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM--- 418
I++ + S DV ++I+ CK ++EA ++++M
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 419 ---LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
L C +I GL+ +R+ EA F R M +NG RP VV+YN LI GL
Sbjct: 459 GVELNSHVC-------NALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF 535
K + +A M+ +G D TY+I++ GLC +I+ A WH + D
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
++ ++ GLC G ++A + + + N+ +YN L+ + + A I M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 596 KKNGLNPDCVTWRILHK 612
K GL PD +++ + K
Sbjct: 631 YKMGLQPDIISYNTIMK 647
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 176/441 (39%), Gaps = 49/441 (11%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
++ ++ +H LCD+ +A F + D R ++
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVF-------NELDERKASI-------------------- 323
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+V Y+ ++ FC + ++ ++ M+++ + N+VSY LI G
Sbjct: 324 ----------DVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYNILIKGLLEN 372
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG- 214
G I +A ++ M G + TY + I G+ + +M VE G
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM------QEVESSGGH 426
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ V A+A+++D LC++ E + +E+ G V +I L + R A+
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ EM K G P+ V YN +I GL K G TY +L+ LC
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+D A E+ L+ ++NI + +M C A+++T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 395 LNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
NT++ GF K G + A + M MG PD++S+ T++ GL V A + F
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMG--LQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Query: 454 VMPENGLRPCVVTYNALIRGL 474
+G+ P V T+N L+R +
Sbjct: 665 A-RNHGIFPTVYTWNILVRAV 684
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C DV +VI + D+A D+F R+ G P + +YN L+ + K+
Sbjct: 76 CDEDVA--LSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILK 542
+++ + G+ + TY ++++ C + E+A+ F D +W G D F Y+ ++
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL-DWMWKEGFKPDVFSYSTVIN 192
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
L ++G ++A E+ + GV+P++ YNILI+
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 76/310 (24%)
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA---TR 443
+C+ D +VI + K D+AL V + M C P + S+ T+++ ++A +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 444 VDEAFDLFHRV-------------------------------MPENGLRPCVVTYNALIR 472
V+ F F M + G +P V +Y+ +I
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 473 GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH 532
L K + +DA ++ M G+ D T Y I+++G + A W ++ S ++
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 533 DN------------------------------------FVYAAILKGLCRSGNFNEACHF 556
N + Y++++ GLC +GN ++A
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK-KNGLNPDCVTWRILHK--- 612
EL + S ++ +YN ++ C E+ ++ R M+ KN +N V++ IL K
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN--IVSYNILIKGLL 370
Query: 613 IQGKVRKQTL 622
GK+ + T+
Sbjct: 371 ENGKIDEATM 380
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 234/539 (43%), Gaps = 18/539 (3%)
Query: 74 NVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDM 133
++L+ +RSR L LV +++ K +P + L+ FR A +F DM
Sbjct: 160 DLLIQHYVRSRRVLDG-VLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
+ G P+V YT +I C + + A+++ M +G + N + Y+VLI G+ +++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ-- 276
Query: 194 EGGRELMCKLWERMSVEVESGVK-----VAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
K+WE + ++ + K V + LV LC+ F + +E+ C
Sbjct: 277 --------KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
E +++ L K G+ A +V + G P+ +YN +I L K
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
D TY +L++ C +D A L M+ YN +
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
M+ + V+T +++ G+C G +++AL++ +M GK AP +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM-TGKGIAPSI 507
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
+FTT++SGL A + +A LF+ M E ++P VTYN +I G + + AF
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNE-MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
M GI D+ +Y ++ GLC Q EAK F + + + Y +L G CR G
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
EA E+V GV ++ Y +LI+ + + + +++EM GL PD V +
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/581 (24%), Positives = 244/581 (41%), Gaps = 16/581 (2%)
Query: 31 SPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTW 90
SPS + ++++ + L + EA + G P+ N L+ L + R +
Sbjct: 329 SPS-EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
L + K G P+ V Y L+D FC + A +M + G +V Y +LIN
Sbjct: 388 LLFDRM--GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
G+C G I A EM+ +EP +TY+ L+ G + G +L+ M+
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK----GKINKALRLYHEMT-- 499
Query: 211 VESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRY 268
G+ + F L+ L R G + ++ E+ V Y MI+ C+ G
Sbjct: 500 -GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 269 HGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVL 328
A + EM ++G VP Y +IHGL G + Y L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 329 VEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
+ C +++A V + M+++ GVD + Y + + M +
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
+ D + ++I+ KTG EA + D+++ + C P+ V++T VI+GL A V+EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGI-WDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
L ++ P + + P VTY + L K + + + G+ A++ TY +++
Sbjct: 737 EVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
G C +IEEA +I D Y ++ LCR + +A + + G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ +YN LI+ C +A ++ EM + GL P+ T R
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 213/511 (41%), Gaps = 46/511 (9%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G PN+ Y LI+ C +A +FD M + G+ PN +TYS+LI + L+
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 197 RELMCKLWERMSVEVESGVKVAAFA--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
+ ++ V++G+K++ + +L++ C+ G + E+ + V
Sbjct: 422 LSFLGEM-------VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y ++ C G+ + A R+ +EM +G PS + ++ GL + G +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
TY V++E C D+ KA E LK M K V T Y +
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
+ + C + I +++GFC+ G ++EAL V Q+M+ + D+V + +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ-RGVDLDLVCYGVL 653
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I G L F L + M + GL+P V Y ++I K +AFG++ M+++G
Sbjct: 654 IDGSLKHKDRKLFFGLL-KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSF--------------------------------- 521
+ TYT ++ GLC + EA+
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 522 --WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
H+ I + + Y +++G CR G EA + ++ GVSP+ +Y +IN
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C + +A ++ M + G+ PD V + L
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 183/407 (44%), Gaps = 16/407 (3%)
Query: 31 SPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTW 90
+PS+ ++ T L L + +A + F+ P+ T NV++ + +
Sbjct: 504 APSI-YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP-NVVSYTTLI 149
++ + + G VP +Y L+ C+ + +A ++F D ++G+C N + YT L+
Sbjct: 563 EFLKEM--TEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLL 619
Query: 150 NGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV 209
+G+C G + +A V EM++ GV+ + + Y VLI G L+ +D R+L L + M
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD----RKLFFGLLKEMH- 674
Query: 210 EVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+ G+K + +++D+ + G F E F I + + +G + EV Y +I+ LCK G
Sbjct: 675 --DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
+ A + +M+ VP+ V Y + LTK M+ TY +
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLES 386
L+ C +++A E++ M+ +GV I Y + SM E
Sbjct: 793 LIRGFCRQGRIEEASELITRMI-GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
R D + NT+I+G C G + +A ++ +ML + S TT
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTT 898
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 193/490 (39%), Gaps = 43/490 (8%)
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML-ESGVEPNSLTY 180
+P D + F + + S+ LI Y + D VF M+ + + P T
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 181 SVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIA 240
S L+ G+++ R EL + +SV + V + + ++ SLC + +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDM---VSVGIRPDVYI--YTGVIRSLCELKDLSRAKEMI 250
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
+ G V Y +ID LCK + A I ++ + P V Y +++GL K
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
+ G + + LVE L +++A ++K ++ +Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
N + + M + R + +T + +I+ FC+ G +D AL L +M+
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV- 429
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
+ GL+ V YN+LI G K
Sbjct: 430 ------------------------------------DTGLKLSVYPYNSLINGHCKFGDI 453
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+ A G + M++ + TYT ++ G C +I +A +H++ + + +
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
L GL R+G +A E+ + V PN +YN++I C S+A++ ++EM + G+
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 601 NPDCVTWRIL 610
PD ++R L
Sbjct: 574 VPDTYSYRPL 583
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 230/546 (42%), Gaps = 80/546 (14%)
Query: 75 VLLARLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD 132
V ++LL + + + LV SL + G +L Y ++ FC + A I
Sbjct: 76 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGK 135
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
M G+ P++V+ +L+NG+C I +A + D+M+E G +P+++T
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT------------- 182
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
F LV L + +E + E + +G +
Sbjct: 183 ---------------------------FTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
V YG +I+ LCK G A ++ +M+K V+YN II GL K +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
TY L+ LC+ A +L
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLS-------------------------- 309
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
MLE D++ N +I+ F K G + EA K+ +M+ K C PDVV++
Sbjct: 310 ---------DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
T+I G RV+E ++F R M + GL VTY LI G ++ + ++A V+ MVS
Sbjct: 361 TLIKGFCKYKRVEEGMEVF-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNE 552
DG+ D TY I+++GLC+ +E A + + D Y +++ LC++G +
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
L GV PN+ +Y +++ C LK EA + EMK++G P+ T+ L
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL-- 537
Query: 613 IQGKVR 618
I+ ++R
Sbjct: 538 IRARLR 543
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 196/476 (41%), Gaps = 45/476 (9%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ + L+ C NR SEA + G PD T L+ L + + ALV +
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V G P LV Y +++ C P A + M+ +VV Y T+I+G C
Sbjct: 207 VV--KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ DA +F++M G++P+ TY+ LI + L+ + E+
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-----NINPD 319
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEEL-PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ F L+D+ +EG E ++ +E+ + + V Y +I CK R +
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM +RG V + V Y +IHG + DC TY +L++ LC+
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+V+ A V + M +++ + D++T
Sbjct: 440 GNVETALVVFEYMQKRD-----------------------------------MKLDIVTY 464
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
T+I CK G V++ + + + K P+VV++TT++SG +EA LF M
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKGLKEEADALFVE-M 522
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
E+G P TYN LIR + + + M S G D++T+ ++ L D
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 249/534 (46%), Gaps = 55/534 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G ++ + +++ FC + C A+ + + G+ P+ ++ TLI G G + +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ D M+E+G +P+ +TY+ ++ G+ + D +L+ K+ ER +V+ + V ++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKAD----VFTYS 232
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++DSLCR+G + + +E+ +G + V Y ++ LCK G+++ A ++ +M R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
VP+ + +N ++ K+G + TY L++ C + +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+L LM+R ++C D++T ++I G
Sbjct: 353 NNMLDLMVR-----------------------------------NKCSPDIVTFTSLIKG 377
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+C VD+ +KV +++ A + V+++ ++ G + ++ A +LF M +G+
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQE-MVSHGVL 435
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P V+TY L+ GL + A ++ + + YT I+EG+C ++E+A +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
+ + + Y ++ GLC+ G+ +EA L ++ + G +PN +YN LI H
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR--AH 553
Query: 582 L---DLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSINY 632
L DL + A +++ EMK G + D + ++ V LS + L++ Y
Sbjct: 554 LRDGDLTASA-KLIEEMKSCGFSADASSIKM-------VIDMLLSAMKRLTLRY 599
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 206/469 (43%), Gaps = 9/469 (1%)
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA +F EM+ S P+ + +S + + + + CK E + +
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDF-CKQLELNGI----AHNIYT 125
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+++ CR + + ++ G + + +I L G+ A +V M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ G P V YN I++G+ + GD TY ++++LC +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A + K M K YN +R M+ + +VIT N ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+ F K G + EA ++ ++M+ + +P+++++ T++ G R+ EA ++ +M N
Sbjct: 306 DVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNK 363
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
P +VT+ +LI+G +KR +D V+ ++ G+ A++ TY+I+V+G C +I+ A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+ +++ + D Y +L GLC +G +A +L S + I Y +I
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
C +A+ + + G+ P+ +T+ ++ I G +K +LSE L
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM--ISGLCKKGSLSEANIL 530
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC + ++++ ++ VP+ T NVLL ++ + L + +I
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-- 327
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGD 160
G P+++ Y+ LMD +C+ R +A+ + D+ R C P++V++T+LI GYC V + D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL--------------------- 199
KVF + + G+ N++TYS+L++G Q ++ EL
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 200 -MC---KLWERMSV-----EVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLA 250
+C KL + + + + + + + + +++ +C+ G + + + LPC+G
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ Y MI LCK G A ++ +M++ G P+D YN +I +DGD
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ C S + A + F ++ G +PD T +LL L + + + L +K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
+V Y +++ C + DA +F + +G PNV++YT +I+G C G + +A
Sbjct: 470 DL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
+ +M E G PN TY+ LIR L++ DL +L+
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/591 (22%), Positives = 247/591 (41%), Gaps = 77/591 (13%)
Query: 48 SNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI---------- 97
+ + EAH+ F++ + G CN L+ L+R W + + +
Sbjct: 178 ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 98 -----------------------VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMK 134
V + G P +V Y+ L+ + +A + M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 135 NRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLE 194
+G P V +Y T+ING C G A++VF EML SG+ P+S TY L+ ++ D+
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 195 GGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
++ + R V + F++++ R G ++ + G + + V+
Sbjct: 358 ETEKVFSDMRSRDVVP-----DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y +I C+ G A + EM ++G V YN I+HGL K +
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
+T +L++ C + ++ A E+ +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQ---------------------------- 504
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M E + R DV+T NT+++GF K G +D A ++ DM+ K P +S++ +
Sbjct: 505 -------KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV-SKEILPTPISYSIL 556
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
++ L + EAF ++ ++ +N ++P V+ N++I+G + +D M+S+G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG--IHDNFVYAAILKGLCRSGNFNE 552
D +Y ++ G + + +A + G + D F Y +IL G CR E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
A L ++++ GV+P+ +Y +IN D +EA++I EM + G +PD
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/635 (22%), Positives = 263/635 (41%), Gaps = 73/635 (11%)
Query: 32 PSLQH---SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQ 88
P+ +H S++ +H L S R S+A C L R++R R+ +
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSC-------------------LLRMIR-RSGVS 146
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
+V SL + + L+ + R+ +AH F ++++G ++ + L
Sbjct: 147 RLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNAL 206
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
I +G + A V+ E+ SGV N T ++++ + ++ +E K+ +S
Sbjct: 207 IGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKME-------KVGTFLS 259
Query: 209 VEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
E GV + + L+ + +G E F + +P +G Y +I+ LCK G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
+Y A + EM + G P Y ++ K GD + + +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
++ ++DKA + + IY I ++ ML+
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
C DV+T NT+++G CK + EA K+ +M + PD + T +I G +
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A +LF + M E +R VVTYN L+ G K+ + A +++ MVS I +Y+I+V
Sbjct: 499 AMELFQK-MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV----- 561
LC + EA W ++I + + +++KG CRSGN ++ FL +++
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 562 --------------------------------DSGVSPNIFSYNILINCACHLDLKSEAY 589
G+ P++F+YN +++ C + EA
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
++R+M + G+NPD T+ + I G V + L+E
Sbjct: 678 VVLRKMIERGVNPDRSTYTCM--INGFVSQDNLTE 710
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 6/239 (2%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+V TLN ++N CK G + E + + K PD+V++ T+IS ++EAF+L
Sbjct: 234 NVYTLNIMVNALCKDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+ MP G P V TYN +I GL K + A V++ M+ G+ DSTTY ++ C
Sbjct: 293 MN-AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ E + + D+ + D +++++ RSGN ++A + + ++G+ P+
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR-ILHKIQGKVRKQTLSEYQSL 628
Y ILI C + S A + EM + G D VT+ ILH G +++ L E L
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH---GLCKRKMLGEADKL 467
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 187/477 (39%), Gaps = 60/477 (12%)
Query: 5 TFLISLKPKPFIPFSLRFSTTIATPSSPSLQ-------------------HSIATTLHAL 45
TFL ++ K P + ++T I+ SS L ++ T ++ L
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 46 CDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARL---------------LRSRTPLQTW 90
C ++ A + F+ L SG PD T LL +RSR +
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 91 ALVRSLI------------------VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD 132
S++ V + G +P V Y L+ +C A + +
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
M +G +VV+Y T+++G C +G+A K+F+EM E + P+S T ++LI G + +
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
L+ EL K+ E+ + V + L+D + G + I ++ + L
Sbjct: 496 LQNAMELFQKMKEK-----RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
+ Y ++++LC G A R+ EM + P+ ++ N +I G + G+ G
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG--VDKTRIYNIYLRAXXXX 370
+Y L+ ++ KA ++K M ++G V YN L
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPD 427
M+E D T +INGF ++ EA ++ +ML F +PD
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF-SPD 726
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 111/281 (39%), Gaps = 36/281 (12%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLL----------------ARLLRS 83
T LH LC EA + F+ PD T +L+ ++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 84 R---------TPLQTWALVRSLIVAK--------PGFVPSLVNYHRLMDQFCVFRRPCDA 126
R T L + V + AK +P+ ++Y L++ C +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 127 HRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
R++ +M ++ P V+ ++I GYC G D ++M+ G P+ ++Y+ LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
++E ++ L+ K+ E V V + +++ CR+ E + ++ +
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPD---VFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
G + Y MI+ A RI EM +RGF P D
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/646 (23%), Positives = 271/646 (41%), Gaps = 68/646 (10%)
Query: 38 IATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR--- 94
+ L +L SN EA + ++ + G D+ T +L+ LR R P + + R
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 95 -----------SLIVAKPGFVPSLV--------------------NYHRLMDQFCVFRRP 123
SL V P LV Y ++ F
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 124 CDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
+A R+ +M G +V++ T+L+NGYC +G A +F+ M E G+ P+ + +SV+
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 184 IRGVLQERDLEGGRELMCKLWE----RMSVEVESGVK--------VAAFANLVDSL---- 227
+ + ++E E ++ SV V + ++ AA DS
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 228 -------------CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
C++G + + + +G V Y M+ + C++ A I
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
EM ++G P++ Y+ +I G K+ D + + Y ++ LC
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 335 VFDVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
V KA+E+L+ +++++ + YN + M E+ +V+
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T ++INGFCK+ +D AL++ +M + D+ ++ +I G + A+ LF
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKL-DLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+PE GL P V YN+LI G L + + A +Y MV+DGI D TYT +++GL
Sbjct: 686 -LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
I A + +++ + D ++ ++ GL + G F +A L E+ V+PN+ Y+
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
+I +EA+++ EM + G+ D + +L + G+V K
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL--VSGRVEK 848
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 217/495 (43%), Gaps = 57/495 (11%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G P+V ++ LI C + A + ++M G+ P+ T++ +++G ++E DL+G
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 197 ---RELMCKL---WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ-GSL 249
RE M + W +SV V +V C+EG + +E+ Q G
Sbjct: 244 LRIREQMVEFGCSWSNVSVNV-----------IVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
++ + +++ LCK G A I+ M + G+ P YN +I GL K G+ +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
TY L+ LC V++A E+ +++ K G+
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GI--------------- 396
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
DV T N++I G C T + A+++ ++M K C PD
Sbjct: 397 -------------------LPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEF 436
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ +I L ++DEA ++ + M +G V+TYN LI G K + +A ++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQ-MELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGN 549
M G+ +S TY +++GLC ++E+A +I D + Y ++L CR G+
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+A + + +G P+I +Y LI+ C A +++R ++ G+N +
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 610 LHKIQGKVRKQTLSE 624
+ IQG RK+ +E
Sbjct: 616 V--IQGLFRKRKTTE 628
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 212/513 (41%), Gaps = 44/513 (8%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + ++ L+ C + A + DM + G P+ ++TT++ GY G + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++ ++M+E G W +SV V
Sbjct: 244 LRIREQMVEFGCS-----------------------------WSNVSVNV---------- 264
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQ-GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
+V C+EG + +E+ Q G ++ + +++ LCK G A I+ M +
Sbjct: 265 -IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
G+ P YN +I GL K G+ + TY L+ LC V++
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
A E+ +++ K + +N ++ M C D T N +I+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
C G +DEAL +L+ M + CA V+++ T+I G A + EA ++F M +G+
Sbjct: 444 SLCSKGKLDEALNMLKQMELSG-CARSVITYNTLIDGFCKANKTREAEEIFDE-MEVHGV 501
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
VTYN LI GL K +R DA + M+ +G D TY ++ C I++A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 521 FWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
+ D Y ++ GLC++G A L + G++ +YN +I
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 581 HLDLKSEAYQIVREM-KKNGLNPDCVTWRILHK 612
+EA + REM ++N PD V++RI+ +
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 201/466 (43%), Gaps = 15/466 (3%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF P ++ L++ C A I M G+ P+V +Y ++I+G C +G + +A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAA 219
+V D+M+ PN++TY+ LI + +E +E EL V G+ V
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-------ARVLTSKGILPDVCT 402
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F +L+ LC + EE+ +G +E Y +IDSLC G+ A ++ +M+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
G S + YN +I G K + TY L++ LC V+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A +++ M+ + YN L +M + C D++T T+I
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 400 NGFCKTGSVDEALKVLQDMLM-GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+G CK G V+ A K+L+ + M G P ++ VI GL + EA +LF ++ +N
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 459 GLRPCVVTYNALIRGLYKLKRP-NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
P V+Y + RGL P +A ++ G + ++ ++ EGL E
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+ V+ + + V +++KGL + F +A L ++DS
Sbjct: 701 LVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQDALATLGGVLDS 744
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T + LC N+ EA + + + G +PD T N L+ L +R L +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM--R 427
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
G P Y+ L+D C + +A + M+ G +V++Y TLI+G+C
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A ++FDEM GV NS+TY+ LI G+ + R +E +LM ++M +E + K
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM----DQMIMEGQKPDKY-T 542
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +L+ CR G + I + + G + V YG +I LCK GR A++++ ++
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 280 KRGFVPSDVLYNYIIHGL 297
+G + YN +I GL
Sbjct: 603 MKGINLTPHAYNPVIQGL 620
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M S+C T +I + + DE L V+ M+ PD + +++ L+D
Sbjct: 109 MKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN 168
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ + ++ H M G++P V T+N LI+ L + + A + M S G+ D T+
Sbjct: 169 SL-KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 503 T-----------------------------------IIVEGLCDCDQIEEAKSFWHDVIW 527
T +IV G C ++E+A +F ++
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 528 PSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
G D + + ++ GLC++G+ A + ++ G P++++YN +I+ C L
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 587 EAYQIVREMKKNGLNPDCVTWRIL 610
EA +++ +M +P+ VT+ L
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTL 371
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/645 (24%), Positives = 270/645 (41%), Gaps = 70/645 (10%)
Query: 38 IATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTW------- 90
+ TL AL N +EA + +S +A G D+ T +L+ LR P +
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 91 -------ALVRSLIVA--------------------KPGFVPSLVNYHRLMDQFCVFRRP 123
+L+ SL V K VPS Y ++
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 124 CDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
DA R+ +M + G NVV+ T+LI G+C + A +FD+M + G PNS+T+SVL
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 184 IRGVLQERDLEGGRELMCKL------------------WER----------MSVEVESGV 215
I + ++E E K+ W + E+G+
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 216 KVAAFANLVDS-LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
N + S LC++G +E + ++ +G V Y ++ C+ + ARI
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR-QKNMDLARI 499
Query: 275 VY-EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
V+ + ++G P++ Y+ +I G ++ D + Y+ ++ LC
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
V KARE+L M+ ++ + + + YN + M + +V
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
IT +++NG CK +D+AL+ ++D + K D+ ++ +I G + ++ A LF
Sbjct: 620 ITYTSLMNGLCKNNRMDQALE-MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
++ E GL P YN+LI G L A +Y M+ DG+ D TYT +++GL
Sbjct: 679 ELL-EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+ A + ++ + D +Y I+ GL + G F + E+ + V+PN+ Y
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKV 617
N +I EA+++ EM G+ PD T+ IL + G+V
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL--VSGQV 840
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 146/374 (39%), Gaps = 37/374 (9%)
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
+++V K GF + +NY+++ +KD + A
Sbjct: 148 SKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSA 207
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRA 390
L + +A+E+ M+ GVD + + +RA +E
Sbjct: 208 LVQRNSLTEAKELYSRMVAI-GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D + + + CKT + A +L++M K C P ++T+VI + +D+A L
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
++ + G+ VV +LI G K A ++ M +G +S T+++++E
Sbjct: 327 KDEMLSD-GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 511 DCDQIEEAKSFW---------------HDVI-------------------WPSGIHDNFV 536
++E+A F+ H +I + +G+ + FV
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV 445
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
IL LC+ G +EA L ++ G+ PN+ SYN ++ C A + +
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 597 KNGLNPDCVTWRIL 610
+ GL P+ T+ IL
Sbjct: 506 EKGLKPNNYTYSIL 519
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 253/550 (46%), Gaps = 22/550 (4%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
+CN +L L S ++ + + SL++ G P++V + L++ FC A +F
Sbjct: 254 SCNKVLKGL--SVDQIEVASRLLSLVL-DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M+ RG P++++Y+TLI+GY G +G K+F + L GV+ + + +S I ++
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
DL +++RM + S V + L+ LC++G E F + ++ +G
Sbjct: 371 DLATAS----VVYKRMLCQGISP-NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y +ID CK G + +M K G+ P V+Y ++ GL+K G + +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM----LRKEGVDKTRIYNIYLR-- 365
+ L++ C + D+A +V +LM ++ + T + + +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA 425
A M ++ AD+ N VI+ K +++A K +++ GK
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-E 604
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFH--RVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
PD+V++ T+I G R+DEA +F +V P P VT LI L K + A
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTP---FGPNTVTLTILIHVLCKNNDMDGA 661
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILK 542
++S M G ++ TY +++ IE + + + + GI + V Y+ I+
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE-MQEKGISPSIVSYSIIID 720
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
GLC+ G +EA + ++ +D+ + P++ +Y ILI C + EA + M +NG+ P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 603 DCVTWRILHK 612
D + R L +
Sbjct: 781 DDLLQRALSE 790
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+V+T T+INGFCK G +D A + + M + PD+++++T+I G A + L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQ-RGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 451 FHRVMPE----------------------------------NGLRPCVVTYNALIRGLYK 476
F + + + G+ P VVTY LI+GL +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV 536
R +AFG+Y ++ G+ TY+ +++G C C + + + D+I D +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
Y ++ GL + G A F +++ + N+ +N LI+ C L+ EA ++ R M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 597 KNGLNPDCVTWRILHKIQ 614
G+ PD T+ + ++
Sbjct: 524 IYGIKPDVATFTTVMRVS 541
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 126/314 (40%), Gaps = 52/314 (16%)
Query: 19 SLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRT------ 72
++RFS + S + + C NRF EA + F + G PD T
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 73 -----------------------------------CNVLLARLLRSRTPLQTWALVRSLI 97
CNV++ L + +LI
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
K P +V Y+ ++ +C RR +A RIF +K PN V+ T LI+ C
Sbjct: 600 EGK--MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV-- 215
+ A ++F M E G +PN++TY L+ + D+EG KL+E M E G+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS----FKLFEEMQ---EKGISP 710
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ +++ ++D LC+ G +E I + L + V Y +I CKVGR AA +
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 276 YEMKKRGFVPSDVL 289
M + G P D+L
Sbjct: 771 EHMLRNGVKPDDLL 784
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL 81
F TP P+ ++ +H LC +N A + FSI GS P+ T L+
Sbjct: 630 FELLKVTPFGPN-TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
+S ++ L + + G PS+V+Y ++D C R +A IF + P+
Sbjct: 689 KSVDIEGSFKLFEEM--QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
VV+Y LI GYC VG + +A +++ ML +GV+P+ L L
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 35/211 (16%)
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLR-------------------------------- 461
V+ L V +A D FHR++ E G R
Sbjct: 223 VLDALFCKGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 462 --PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
P VVT+ LI G K + AF ++ M GI D Y+ +++G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+ + D V+++ + +SG+ A ++ G+SPN+ +Y ILI
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C EA+ + ++ K G+ P VT+ L
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 234/528 (44%), Gaps = 10/528 (1%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G V + + N L+ LL+SR + + R +I+ GF PSL Y LM R
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE--GFRPSLQTYSSLMVGLGKRRDID 240
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+ +M+ G PNV ++T I G I +A ++ M + G P+ +TY+VLI
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
+ R L+ +E ++E+M +V + L+D + V + E+
Sbjct: 301 DALCTARKLDCAKE----VFEKMKTGRHKPDRV-TYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
G + + V + ++D+LCK G + A + M+ +G +P+ YN +I GL +
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ +TY V ++ D A E + M K N L
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
+ + + D +T N ++ + K G +DEA+K+L +M M C
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGC 534
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
PDV+ ++I+ L A RVDEA+ +F R M E L+P VVTYN L+ GL K + +A
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
++ MV G ++ T+ + + LC D++ A ++ + D F Y I+ GL
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
++G EA F +++ V P+ + L+ L +AY+I+
Sbjct: 654 VKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 161/613 (26%), Positives = 254/613 (41%), Gaps = 65/613 (10%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
++ + L + + +EA++ G PD T VL+ L +R +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+ + P V Y L+D+F R + + +M+ GH P+VV++T L++ C
Sbjct: 319 MKTGR--HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES-G 214
G G+A D M + G+ PN TY+ LI G+L+ L+ EL + ES G
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM--------ESLG 428
Query: 215 VKVAAFANLV--DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
VK A+ +V D + G E++ +G V + SL K GR A
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+I Y +K G VP V YN ++ +K G+ + C+ V+ +
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK---LLSEMMENGCEPDVIVVNSLI 545
Query: 333 CHVFDVDKAREVLKLMLR-KEGVDKTRI--YNIYLRAXXXXXXXXXXXXXXXSMLESQCR 389
++ D+ E K+ +R KE K + YN L M++ C
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ IT NT+ + CK V ALK+L M+ MG C PDV ++ T+I GL+ +V EA
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG--CVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
FH++ + + P VT L+ G+ K +S++ D Y II
Sbjct: 664 CFFHQM--KKLVYPDFVTLCTLLPGVVK-----------ASLIEDA-------YKIITNF 703
Query: 509 LCDCDQIEEAKSFWHDVIWP----SGIHD--NFVYAAILKGLCRSG-------------- 548
L +C + A FW D+I +GI + +F + G+CR G
Sbjct: 704 LYNCAD-QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 549 NFNEACHFLYELV--DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
N L+E D GV P + +YN+LI D+ A + ++K G PD T
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 607 WRILHKIQGKVRK 619
+ L GK K
Sbjct: 823 YNFLLDAYGKSGK 835
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/600 (24%), Positives = 263/600 (43%), Gaps = 56/600 (9%)
Query: 38 IATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI 97
+ + ++ L ++R EA + F P T N LLA L ++ + L ++
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ G P+ + ++ L D C A ++ F M + G P+V +Y T+I G G
Sbjct: 601 --QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ +A F +M + V P+ +T L+ GV++ +E +++ + + +
Sbjct: 659 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN---- 713
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE-EVVYGQMIDSLCKVGRYHGAARIVY 276
+ +L+ S+ E + +E L G + + + +I CK GA R ++
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGA-RTLF 772
Query: 277 E--MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTYKVLVEALC 333
E K G P YN +I GL + D + Q D TY L++A
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLL-EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+D+ E+ K M +C A+ I
Sbjct: 832 KSGKIDELFELYK-----------------------------------EMSTHECEANTI 856
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N VI+G K G+VD+AL + D++ + +P ++ +I GL + R+ EA LF
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M + G RP YN LI G K + A ++ MV +G+ D TY+++V+ LC
Sbjct: 917 -MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 514 QIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDS-GVSPNIFS 571
+++E ++ + + SG++ + V Y I+ GL +S EA E+ S G++P++++
Sbjct: 976 RVDEGLHYFKE-LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL---HKIQGKVRKQTLSEYQSL 628
YN LI + EA +I E+++ GL P+ T+ L + + GK + + YQ++
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK-PEHAYAVYQTM 1093
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 16/356 (4%)
Query: 153 CSVGGIGDARKVFDEMLES-GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
C + AR +F++ + GV+P TY++LI G+L+ +E +++ ++ +
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP- 818
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
VA + L+D+ + G +E+F + +E+ A + + +I L K G A
Sbjct: 819 ----DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 272 ARIVYE-MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHT---YKV 327
+ Y+ M R F P+ Y +I GL+K G R Y+ C Y +
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSG---RLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGV-DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
L+ + D A + K M+ KEGV + Y++ + + ES
Sbjct: 932 LINGFGKAGEADAACALFKRMV-KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
DV+ N +ING K+ ++EAL + +M + PD+ ++ ++I L A V+E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
A +++ + GL P V T+NALIRG +P A+ VY +MV+ G ++ TY
Sbjct: 1051 AGKIYNEIQ-RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLDA 441
M+ R + T ++++ G K +D + +L++M +G P+V +FT I L A
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG--LKPNVYTFTICIRVLGRA 271
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
+++EA+++ R M + G P VVTY LI L ++ + A V+ M + D T
Sbjct: 272 GKINEAYEILKR-MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y +++ D ++ K FW ++ + D + ++ LC++GNF EA L +
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
D G+ PN+ +YN LI + +A ++ M+ G+ P T+ + GK
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N ++ G ++E V D++ + D ++ T+ L + +A R
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVF-DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA-PYALR 177
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M E G +YN LI L K + +A VY M+ +G TY+ ++ GL
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 514 QIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
I+ + + G+ N + + ++ L R+G NEA L + D G P++ +Y
Sbjct: 238 DIDSVMGLLKE-METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+LI+ C A ++ +MK PD VT+ L
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL 81
F + P L+ + + + LC R E F SG PD N+++ L
Sbjct: 949 FKRMVKEGVRPDLK-TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
+S + L + ++ G P L Y+ L+ + +A +I+ +++ G PN
Sbjct: 1008 KSHRLEEALVLFNEMKTSR-GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
V ++ LI GY G A V+ M+ G PN+ TY L
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/576 (26%), Positives = 250/576 (43%), Gaps = 50/576 (8%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
Q S+ L++L S+R F G P + + + L + + T AL
Sbjct: 181 QDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV-TKALDF 239
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+V + GF +V+ ++++ V + A R+ + + G PNVV++ TLING+C
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEV-ASRLLSLVLDCGPAPNVVTFCTLINGFCK 298
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
G + A +F M + G+EP+ + YS LI G + L G +L S + G
Sbjct: 299 RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF-------SQALHKG 351
Query: 215 VK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
VK V F++ +D + G + + + CQG V Y +I LC+ GR + A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+ ++ KRG PS V Y+ +I G K G+ G+ Y VLV+ L
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
+++ L L + V ML R +V
Sbjct: 472 --------SKQGLMLHAMRFSV---------------------------KMLGQSIRLNV 496
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDEAFDLF 451
+ N++I+G+C+ DEALKV + LMG + PDV +FTTV+ + R++EA LF
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFR--LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M + GL P + Y LI K +P ++ M + I AD +++ L
Sbjct: 555 FR-MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
C +IE+A F++++I D Y ++ G C +EA L + PN +
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
ILI+ C + A ++ M + G P+ VT+
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/576 (23%), Positives = 249/576 (43%), Gaps = 45/576 (7%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
+CN +L L S ++ + + SL++ G P++V + L++ FC A +F
Sbjct: 254 SCNKVLKGL--SVDQIEVASRLLSLVL-DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M+ RG P++++Y+TLI+GY G +G K+F + L GV+ + + +S I ++
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
DL +++RM + S V + L+ LC++G E F + ++ +G
Sbjct: 371 DLATAS----VVYKRMLCQGISP-NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y +ID CK G + +M K G+ P V+Y ++ GL+K G + +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
+ L++ C + D+A +V +LM + +R
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M + D + T+I+ FCK L++ M K A D+
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA-DIAVC 604
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
VI L R+++A F+ ++ E + P +VTYN +I G L+R ++A ++ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI----------------WPS------ 529
G ++ T TI++ LC + ++ A + + W S
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 530 ------------GIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
GI + V Y+ I+ GLC+ G +EA + ++ +D+ + P++ +Y ILI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
C + EA + M +NG+ PD + R L +
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 228/537 (42%), Gaps = 19/537 (3%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLL-----ARLLRSRTPLQTWA 91
+ T ++ C A F + G PD + L+ A +L L + A
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L + G +V + +D + A ++ M +G PNVV+YT LI G
Sbjct: 348 LHK-------GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
C G I +A ++ ++L+ G+EP+ +TYS LI G + +L G L+E M +++
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG----FALYEDM-IKM 455
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
V + LVD L ++G R + ++ Q VV+ +ID C++ R+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
++ M G P + ++ +G Y L++A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
C ++ LM R + + N+ + +++E + D
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
++T NT+I G+C +DEA ++ + + + F P+ V+ T +I L +D A +F
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPF-GPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+M E G +P VTY L+ K +F ++ M GI +Y+II++GLC
Sbjct: 695 S-IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
+++EA + +H I + D YA +++G C+ G EA ++ +GV P+
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+V+T T+INGFCK G +D A + + M + PD+++++T+I G A + L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQ-RGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 451 FHRVMPE----------------------------------NGLRPCVVTYNALIRGLYK 476
F + + + G+ P VVTY LI+GL +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV 536
R +AFG+Y ++ G+ TY+ +++G C C + + + D+I D +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
Y ++ GL + G A F +++ + N+ +N LI+ C L+ EA ++ R M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 597 KNGLNPDCVTWRILHKI---QGKVRKQTLSEYQSLSINYE 633
G+ PD T+ + ++ +G++ + ++ + E
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T + A C + + Q F + + D CNV++ L + +LI
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K P +V Y+ ++ +C RR +A RIF +K PN V+ T LI+ C +
Sbjct: 631 K--MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--V 217
A ++F M E G +PN++TY L+ + D+EG KL+E M E G+ +
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS----FKLFEEMQ---EKGISPSI 741
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+++ ++D LC+ G +E I + L + V Y +I CKVGR AA +
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Query: 278 MKKRGFVPSDVL 289
M + G P D+L
Sbjct: 802 MLRNGVKPDDLL 813
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL 81
F TP P+ ++ +H LC +N A + FSI GS P+ T L+
Sbjct: 659 FELLKVTPFGPN-TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
+S ++ L + + G PS+V+Y ++D C R +A IF + P+
Sbjct: 718 KSVDIEGSFKLFEEM--QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
VV+Y LI GYC VG + +A +++ ML +GV+P+ L L
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 152/623 (24%), Positives = 266/623 (42%), Gaps = 39/623 (6%)
Query: 11 KPKPFIPFSLRFSTTI--ATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVP 68
KP+ + F T+I A PS L + + + +L ++F++A +S S
Sbjct: 54 KPETLVSFFQWAQTSIPEAFPSDSPL--PLISVVRSLLSHHKFADAKSLL-VSYIRTSDA 110
Query: 69 DHRTCNVLLARLLRSRTP----LQTWALVRSLIVAKP-------------GFVPSLVNYH 111
CN LL L P L AL L KP P+L+ +
Sbjct: 111 SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 112 RLMDQFCVFRRPCD-----AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
L+ + R P A +F DM G NV ++ L+NGYC G + DA + +
Sbjct: 171 TLL--IGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE 228
Query: 167 EML-ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
M+ E V P+++TY+ +++ + ++ L +EL+ + + V + NLV
Sbjct: 229 RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP-----NRVTYNNLVY 283
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
C+ G E F+I E + L + Y +I+ LC G ++ MK P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
V YN +I G + G + + T+ + ++ LC + +
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 346 KLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCK 404
K ++ G + Y+ ++A M + + + ITLNT+++ CK
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 405 TGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCV 464
+DEA +L F D V++ T+I G +V++A +++ M + + P V
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIV-DEVTYGTLIMGFFREEKVEKALEMWDE-MKKVKITPTV 521
Query: 465 VTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHD 524
T+N+LI GL + A + + G+ D +T+ I+ G C ++E+A F+++
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 525 VIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDL 584
I S DN+ +L GLC+ G +A +F L++ + +YN +I+ C
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKK 640
Query: 585 KSEAYQIVREMKKNGLNPDCVTW 607
EAY ++ EM++ GL PD T+
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTY 663
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 211/491 (42%), Gaps = 44/491 (8%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P V Y+ ++ R D + DMK G PN V+Y L+ GYC +G + +A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
+ M ++ V P+ TY++LI G+ + G ELM + S++++ V + L+
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM---KSLKLQPD--VVTYNTLI 352
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM-KKRGF 283
D G E ++ E++ G A +V + + LCK + R V E+ GF
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
P V Y+ +I K GD + T +++ALC +D+A
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
+L ++ + D +T T+I GF
Sbjct: 473 LLNSAHKRGFI-----------------------------------VDEVTYGTLIMGFF 497
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
+ V++AL++ +M K P V +F ++I GL + + A + F + E+GL P
Sbjct: 498 REEKVEKALEMWDEMKKVKI-TPTVSTFNSLIGGLCHHGKTELAMEKFDE-LAESGLLPD 555
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
T+N++I G K R AF Y+ + D+ T I++ GLC E+A +F++
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 524 DVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLD 583
+I + D Y ++ C+ EA L E+ + G+ P+ F+YN I+
Sbjct: 616 TLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Query: 584 LKSEAYQIVRE 594
SE +++++
Sbjct: 675 KLSETDELLKK 685
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 226/540 (41%), Gaps = 29/540 (5%)
Query: 83 SRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQ---FCVFRRPCDA-----HRIFFDMK 134
S +PL ++VRSL+ ++H+ D + R DA + +
Sbjct: 75 SDSPLPLISVVRSLL-----------SHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNL 123
Query: 135 NRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ---ER 191
+ P+ + ++ Y G A ++F +M+ ++PN LT + L+ G+++
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL-A 250
+ RE+ + V++ + V F LV+ C EG + + E + + +
Sbjct: 184 SISSAREVFDDM-----VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
+ V Y ++ ++ K GR ++ +MKK G VP+ V YN +++G K G +Q
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
TY +L+ LC+ + + E++ M + YN +
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
M +A+ +T N + CK + + +++++ +PD+V+
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ T+I L + A ++ R M + G++ +T N ++ L K ++ ++A + +S
Sbjct: 419 YHTLIKAYLKVGDLSGALEMM-REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
G D TY ++ G +++E+A W ++ + +++ GLC G
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
A EL +SG+ P+ ++N +I C +A++ E K+ PD T IL
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 193/455 (42%), Gaps = 17/455 (3%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
PD+ T N +L + + L+ L + K G VP+ V Y+ L+ +C +A
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELL--LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+I MK P++ +Y LING C+ G + + ++ D M ++P+ +TY+ LI G
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 188 LQERDLEGGRELMC-KLWERMSVEVESGVKVAAFANLVDS--LCREGFFNEVFRIAEEL- 243
E G L KL E+M GVK + + LC+E V R +EL
Sbjct: 356 -----FELGLSLEARKLMEQME---NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
G + V Y +I + KVG GA ++ EM ++G + + N I+ L K+
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
+ + TY L+ V+KA E+ M + + +N
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+ + ES D T N++I G+CK G V++A + + + F
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
PD + +++GL ++A + F+ ++ E + VTYN +I K K+ +A
Sbjct: 588 -KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD--TVTYNTMISAFCKDKKLKEA 644
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
+ + S M G+ D TY + L + ++ E
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 199/502 (39%), Gaps = 73/502 (14%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
++ C EA Q + + +PD T N+L+ L + + + L+ ++ K
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK- 340
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P +V Y+ L+D +A ++ M+N G N V++ + C
Sbjct: 341 -LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 162 RKVFDEMLE-SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
+ E+++ G P+ +TY LI+ L+ DL G E+M ++ ++ G+K+
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK-------GIKMNTI 452
Query: 221 A--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
++D+LC+E +E + +G + +EV YG +I + + A + EM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
KK P+ +N +I GL G + D T+ ++ C V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
+KA E YN ++ + D T N +
Sbjct: 573 EKAFE---------------FYN--------------------ESIKHSFKPDNYTCNIL 597
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+NG CK G ++AL ++ + D V++ T+IS ++ EA+DL M E
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSE-MEEK 654
Query: 459 GLRPCVVTYNALIRGLYK----------LKRPNDAFGVY-------------SSMVSDGI 495
GL P TYN+ I L + LK+ + FG +S + +
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEEL 714
Query: 496 GADSTTYTIIVEGLCDCDQIEE 517
++ Y+ +++ LC +++E
Sbjct: 715 NTEAIAYSDVIDELCSRGRLKE 736
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 109/274 (39%), Gaps = 61/274 (22%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ T L ALC + EAH LL S
Sbjct: 453 TLNTILDALCKERKLDEAHN-----------------------LLNS------------- 476
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
K GF+ V Y L+ F + A ++ +MK P V ++ +LI G C G
Sbjct: 477 -AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A + FDE+ ESG+ P+ T++ +I G +E +E K +E + ++ K
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE-------KAFEFYNESIKHSFK 588
Query: 217 VAAFA--NLVDSLCREG-------FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+ L++ LC+EG FFN + E + V Y MI + CK +
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE--------VDTVTYNTMISAFCKDKK 640
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
A ++ EM+++G P YN I L +DG
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 231/548 (42%), Gaps = 72/548 (13%)
Query: 90 WALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLI 149
+ LVRS P PS+ Y+ L++ RR ++ DM G P ++ LI
Sbjct: 98 FQLVRSRF---PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLI 154
Query: 150 NGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV 209
C + AR++FDEM E G +PN T+ +L+RG
Sbjct: 155 RALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY---------------------- 192
Query: 210 EVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYH 269
C+ G ++ + + G L +V+Y ++ S C+ GR
Sbjct: 193 ------------------CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 270 GAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH----TY 325
+ ++V +M++ G VP V +N I L K+G + + TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
++++ C V ++ A+ + + + + + + YNI+L+ M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
+ + N +++G CK G + +A ++ M C PD V++ ++ G +VD
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVD 413
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
A L +M N L P T N L+ L+K+ R ++A + M G G D+ T II
Sbjct: 414 AAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 506 VEGLCDCDQIEEAKSF------------------WHDVIWPSGIHDN-----FVYAAILK 542
V+GLC ++++A + ++ S I +N Y+ +L
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
GLC++G F EA + E++ + P+ +YNI I+ C S A++++++M+K G +
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 603 DCVTWRIL 610
T+ L
Sbjct: 593 SLETYNSL 600
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/574 (22%), Positives = 248/574 (43%), Gaps = 62/574 (10%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ ALCDS+ A + F G P+ T +L+ ++ + L+ ++
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM--ESF 211
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P+ V Y+ ++ FC R D+ ++ M+ G P++V++ + I+ C G + DA
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 162 RKVFDEM-LESGV---EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
++F +M L+ + PNS+TY+++++G + LE + L + E + +
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL-----ASL 326
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
++ + L R G F E + +++ +G Y ++D LCK+G A IV
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
MK+ G P V Y ++HG C V
Sbjct: 387 MKRNGVCPDAVTYGCLLHGY-----------------------------------CSVGK 411
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
VD A+ +L+ M+R + NI L + M E D +T N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+++G C +G +D+A+++++ M + A + + + GL+D + + E
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI--GLVDDSLI------------E 517
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
N P ++TY+ L+ GL K R +A +++ M+ + + DS Y I + C +I
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 518 AKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
A D + G H + Y +++ GL E + E+ + G+SPNI +YN I
Sbjct: 578 AFRVLKD-MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C + +A ++ EM + + P+ +++ L
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/568 (22%), Positives = 227/568 (39%), Gaps = 74/568 (13%)
Query: 20 LRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLAR 79
+ + P S+ +++ L C +A F + + ++ N+ L
Sbjct: 278 MELDEYLGLPRPNSITYNL--MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 80 LLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC 139
L+R ++ +++ + G PS+ +Y+ LMD C DA I MK G C
Sbjct: 336 LVRHGKFIEAETVLKQM--TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+ V+Y L++GYCSVG + A+ + EM+ + PN+ T ++L+ + + + EL
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS----------- 248
+ K+ E+ G+ +VD LC G ++ I + + GS
Sbjct: 454 LRKMNEK-----GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 249 ------------LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHG 296
L + + Y +++ LCK GR+ A + EM P V YN IH
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 297 LTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK 356
K G ++ K + + CH K+ E ++ G+ K
Sbjct: 569 FCKQGKISSAFR---------------VLKDMEKKGCH-----KSLETYNSLILGLGI-K 607
Query: 357 TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQ 416
+I+ I+ M E ++ T NT I C+ V++A +L
Sbjct: 608 NQIFEIH--------------GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 417 DMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCV--VTYNALIRGL 474
+M M K AP+V SF +I D A ++F + G + + + +N L+
Sbjct: 654 EM-MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAG 712
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
LK A + +++ G + Y +VE LC D++E A H +I D
Sbjct: 713 QLLK----ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768
Query: 535 FVYAAILKGLCRSGNFNEACHFLYELVD 562
++ GL + GN EA F ++++
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMME 796
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 243/564 (43%), Gaps = 8/564 (1%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T ++ + + A Q + L+ G P+H T N L+ + + AL ++
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE--ALKMFYMME 400
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
G PS V+Y L+D C A + MK G C ++YT +I+G C G +
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A + +EM + G++P+ +TYS LI G + + +E++C+++ R+ + +
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGII---- 515
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
++ L+ + CR G E RI E + +G + + ++ SLCK G+ A + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
G +P+ V ++ +I+G G+ ++ + TY L++ LC +
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A + LK + T +YN L A M++ D T ++I
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G C+ G A+ ++ P+ V +T + G+ A + +A F M G
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLG 754
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
P +VT NA+I G ++ + + M + G + TTY I++ G + +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+ +I + D +++ G+C S L + GV + +++N+LI+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 580 CHLDLKSEAYQIVREMKKNGLNPD 603
C + A+ +V+ M G++ D
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLD 898
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 140/603 (23%), Positives = 248/603 (41%), Gaps = 49/603 (8%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLL---ARLLRSRTPLQTWALVRSLIV 98
++ LC F ++ SG P T N +L + R + ++ ++S
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--- 296
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
G + Y+ L+ C R + + DM+ R PN V+Y TLING+ + G +
Sbjct: 297 --KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL------------------- 199
A ++ +EML G+ PN +T++ LI G + E + + ++
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 200 ---MCK---------LWERMSVEVESGVKVA--AFANLVDSLCREGFFNEVFRIAEELPC 245
+CK + RM +GV V + ++D LC+ GF +E + E+
Sbjct: 415 LDGLCKNAEFDLARGFYMRMK---RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
G + V Y +I+ CKVGR+ A IV + + G P+ ++Y+ +I+ + G C++
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG-CLK 530
Query: 306 GYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
DH T+ VLV +LC V +A E ++ M + T ++ +
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M + T +++ G CK G + EA K L+ L
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPA 649
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
A D V + T+++ + + + +A LF M + + P TY +LI GL + + A
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGE-MVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 485 GVYSSMVSDG-IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG 543
+ G + + YT V+G+ Q + F + D A++ G
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
R G + L E+ + PN+ +YNIL++ S ++ + R + NG+ PD
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 604 CVT 606
+T
Sbjct: 829 KLT 831
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/633 (22%), Positives = 252/633 (39%), Gaps = 97/633 (15%)
Query: 38 IATTLHALCDSNRFSEA-HQCFSISLASGS--------VPDHRTCN-------VLLARLL 81
+ T H L + + A H +SL SG + +R CN +L+ L
Sbjct: 115 VCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYL 174
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
R + + R ++ GF PS+ + ++ +M R CP+
Sbjct: 175 REGMIQDSLEIFR--LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 232
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
V ++ LIN C+ G + + +M +SG P +TY+ ++ ++ + EL+
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 292
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
+ + V+ + V + L+ LCR + + + ++ + EV Y +I+
Sbjct: 293 HMKSK-GVDAD----VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
G+ A++++ EM G P+ V +N +I G +G+ +
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
+ +Y VL++ LC + D AR + +++ GV R
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARG-FYMRMKRNGVCVGR----------------------- 443
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
IT +I+G CK G +DEA+ +L +M PD+V+++ +I+G
Sbjct: 444 -----------ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKV 491
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R A ++ R+ GL P + Y+ LI ++ +A +Y +M+ +G D T
Sbjct: 492 GRFKTAKEIVCRIY-RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 502 YTIIVEGLCDCDQIEEAKSFWH----DVIWPS---------------------------- 529
+ ++V LC ++ EA+ F D I P+
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 530 --GIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
G H F Y ++LKGLC+ G+ EA FL L + + YN L+ C +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 587 EAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
+A + EM + + PD T+ L I G RK
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSL--ISGLCRK 701
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/614 (21%), Positives = 243/614 (39%), Gaps = 43/614 (7%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
++ C RF A + G P+ + L+ R + + ++I+
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL--E 542
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G ++ L+ C + +A M + G PN VS+ LINGY + G A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
VFDEM + G P TY L++G+ + L + + L V + V +
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA-----VPAAVDTVMYN 657
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ ++C+ G + + E+ + L + Y +I LC+ G+ A E + R
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 282 GFV-PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
G V P+ V+Y + G+ K G G T +++ + ++K
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
++L M + G YNI L S++ + D +T ++++
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 401 GFCKTGSVDEALKVLQ--------------DMLMGKFCAP-------DVVSFTTVISGLL 439
G C++ ++ LK+L+ +ML+ K CA D+V T + L
Sbjct: 838 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 440 DATRVDEAFDLFHR------------VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVY 487
D D + +R M + G+ P Y LI GL ++ AF V
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 488 SSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRS 547
M++ I + + +V L C + +EA ++ + + ++ C++
Sbjct: 958 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
GN EA + + G+ ++ SYN+LI C + A+++ EMK +G + T+
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Query: 608 RILHKIQGKVRKQT 621
+ L I+G + ++T
Sbjct: 1078 KAL--IRGLLARET 1089
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K VP++ ++ LM C +A + M N G ++VSY LI G C+ G +
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK 202
A ++++EM G N+ TY LIRG+L G +++ K
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 214/522 (40%), Gaps = 26/522 (4%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G P + N +L LL + + R + + GF P++ Y+ L+ C +
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM--KRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A ++ +M N+G CP+ VSYTT+I+ C VG + + R++ + EP Y+ LI
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALI 253
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEE 242
G+ +E D +G ELM ++ VE G+ V +++ L++ LC G F +
Sbjct: 254 NGLCKEHDYKGAFELMREM-------VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM-KKRGFVPSDVLYNYIIHGLTKDG 301
+ +G ++ G A + +M + G P+ V YN ++ G G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
+ ++ TY L+ +D A + ML +Y
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
+ A M + C V T N I G C G +D A KV + M
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
C P++V++ ++ GL A R++EA+ L + G+ TYN L+ G P
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-GVEWSSSTYNTLLHGSCNAGLPG 545
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI-----WPSGIHDNFV 536
A + M+ DG D T +I+ C + E A V W D
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRP---DVIS 602
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
Y ++ GLCRS + L ++ +G+ P+I ++++LINC
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINC 644
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 215/519 (41%), Gaps = 34/519 (6%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
PS+ Y+ ++D R + ++ DMK G PNV +Y L+ C + A+K+
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
EM G P++++Y+ +I + + ++ GREL + +SV + L+
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV----------YNALI 253
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+ LC+E + F + E+ +G + Y +I+ LC G+ A + +M KRG
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 285 P-----SDVLYNYIIHGLTKDG-----DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
P S ++ + G T D +RG+ Y LV+ C
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV---------AYNTLVQGFCS 364
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
++ KA V M R Y + ML S C +V+
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
++ C+ EA + L +++ + CAP V +F I GL DA R+D A +F ++
Sbjct: 425 YTNMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
++ P +VTYN L+ GL K R +A+G+ + G+ S+TY ++ G C+
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG---VSPNIFS 571
A ++ D I+ C+ G A L +LV G P++ S
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVIS 602
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
Y +I C + + + ++ M G+ P TW +L
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 171/396 (43%), Gaps = 12/396 (3%)
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
E+F +E C S+ +Y ++D+L R + +MK+ GF P+ YN ++
Sbjct: 132 EMFYRIKEFGCDPSVK---IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
L K+ + +Y ++ ++C V V + RE+ + R E V
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE---RFEPV 245
Query: 355 DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+YN + M+E +VI+ +T+IN C +G ++ A
Sbjct: 246 --VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
L ML + C P++ + ++++ G +A DL+++++ GL+P VV YN L++G
Sbjct: 304 LTQML-KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
A V+S M G + TY ++ G ++ A W+ ++ +
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 535 FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
VY +++ LCR F EA + + +P++ ++N I C A ++ R+
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 595 M-KKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLS 629
M +++ P+ VT+ L + G + + E L+
Sbjct: 483 MEQQHRCPPNIVTYNEL--LDGLAKANRIEEAYGLT 516
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 212/494 (42%), Gaps = 14/494 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
H C S + E+ + G PD C L+ R + VR + + +
Sbjct: 96 FHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA---VRVMEILEK 152
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P + Y+ L++ FC R DA R+ M+++ P+ V+Y +I CS G + A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
KV +++L +P +TY++LI + LEGG + KL + M + G+K F
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATM----LEGGVDEALKLMDEM---LSRGLKPDMFT 265
Query: 222 --NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
++ +C+EG + F + L +G + + Y ++ +L G++ +++ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
P+ V Y+ +I L +DG ++Y L+ A C +D
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A E L+ M+ + YN L + E C + + NT+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+ +G AL ++ +M M PD +++ ++IS L VDEAF+L M
Sbjct: 446 SALWSSGDKIRALHMILEM-MSNGIDPDEITYNSMISCLCREGMVDEAFELLVD-MRSCE 503
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
P VVTYN ++ G K R DA V SMV +G + TTYT+++EG+ EA
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 520 SFWHDVIWPSGIHD 533
+D++ I +
Sbjct: 564 ELANDLVRIDAISE 577
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 236/527 (44%), Gaps = 55/527 (10%)
Query: 70 HRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRI 129
HR+C RS +++ L+ +++ + G+ P ++ +L+ F R A R+
Sbjct: 97 HRSC--------RSGNYIESLHLLETMV--RKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 130 FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ 189
++ G P+V +Y LING+C + I DA +V D M P+++TY+++I G L
Sbjct: 147 MEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI-GSLC 204
Query: 190 ERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
R G +L K+ ++ + V + L+++ EG +E ++ +E+ +G
Sbjct: 205 SR---GKLDLALKVLNQL-LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ Y +I +CK G A +V ++ +G P + YN ++ L G G +
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
TY +L+ LC +++A +LKLM +++G+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM-KEKGLT-------------- 365
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
D + + +I FC+ G +D A++ L+ M+ C PD+V
Sbjct: 366 --------------------PDAYSYDPLIAAFCREGRLDVAIEFLETMI-SDGCLPDIV 404
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ TV++ L + D+A ++F + + E G P +YN + L+ A +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSG 548
M+S+GI D TY ++ LC ++EA D + H + V Y +L G C++
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD-MRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
+A + L +V +G PN +Y +LI ++EA ++ ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 8/386 (2%)
Query: 230 EGFFN-----EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+GFF + R+ E L G + Y +I+ CK+ R A R++ M+ + F
Sbjct: 132 KGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS 190
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
P V YN +I L G + TY +L+EA VD+A ++
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 345 LKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCK 404
+ ML + YN +R ++ C DVI+ N ++
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 405 TGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCV 464
G +E K++ M K C P+VV+++ +I+ L +++EA +L ++M E GL P
Sbjct: 311 QGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLL-KLMKEKGLTPDA 368
Query: 465 VTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHD 524
+Y+ LI + R + A +M+SDG D Y ++ LC + ++A +
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 525 VIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDL 584
+ ++ Y + L SG+ A H + E++ +G+ P+ +YN +I+C C +
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 585 KSEAYQIVREMKKNGLNPDCVTWRIL 610
EA++++ +M+ +P VT+ I+
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIV 514
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 196/460 (42%), Gaps = 12/460 (2%)
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE 212
C G ++ + + M+ G P+ + + LI+G R++ +M ++ E+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQP-- 156
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
V A+ L++ C+ ++ R+ + + + + V Y MI SLC G+ A
Sbjct: 157 ---DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+++ ++ P+ + Y +I +G + TY ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
C VD+A E+++ + K YNI LRA M +C +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
+T + +I C+ G ++EA+ +L+ ++ K PD S+ +I+ R+D A + F
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLK-LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FL 391
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
M +G P +V YN ++ L K + + A ++ + G +S++Y + L
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 513 -DQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
D+I + +GI D Y +++ LCR G +EA L ++ P++
Sbjct: 452 GDKIRALHMILE--MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+YNI++ C +A ++ M NG P+ T+ +L
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 248/559 (44%), Gaps = 32/559 (5%)
Query: 63 ASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRR 122
A+G PD T ++ L ++ + + L K VP Y+ ++ + +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL--EKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 123 PCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
+A+ + + +G P+V++Y ++ +G + +A KVF+EM + PN TY++
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNI 382
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFAN------LVDSLCREGFFNEV 236
LI + + L+ EL +S K F N +VD LC+ +E
Sbjct: 383 LIDMLCRAGKLDTAFELR-----------DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 237 FRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM-----KKRGFVPSDVLYN 291
+ EE+ + +E+ + +ID L KVGR A ++ +M + V + ++ N
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+ HG +DG + Y+ +TY ++ + + +K R + + + +
Sbjct: 492 FFNHGRKEDGH--KIYKDMINQNCSPDLQLLNTY---MDCMFKAGEPEKGRAMFEEIKAR 546
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
V R Y+I + SM E C D N VI+GFCK G V++A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++L++M F P VV++ +VI GL R+DEA+ LF + + VV Y++LI
Sbjct: 607 YQLLEEMKTKGF-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLI 664
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G K+ R ++A+ + ++ G+ + T+ +++ L ++I EA + +
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ Y ++ GLC+ FN+A F E+ G+ P+ SY +I+ +EA +
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 592 VREMKKNGLNPDCVTWRIL 610
K NG PD + +
Sbjct: 785 FDRFKANGGVPDSACYNAM 803
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/580 (22%), Positives = 252/580 (43%), Gaps = 14/580 (2%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ + + LC +NR EA + F + VP N ++ + + ++L+
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER- 333
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
G +PS++ Y+ ++ + +A ++F +MK + PN+ +Y LI+ C G
Sbjct: 334 -QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAG 391
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A ++ D M ++G+ PN T ++++ + + + L+ C ++E M +V + +
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA----CAMFEEMDYKVCTPDE 447
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ F +L+D L + G ++ +++ E++ +VY +I + GR +I
Sbjct: 448 IT-FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M + P L N + + K G+ +G +Y +L+ L
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ E+ M + V TR YNI + M V+T
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+VI+G K +DEA + ++ K +VV ++++I G R+DEA+ + +M
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM- 684
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ GL P + T+N+L+ L K + N+A + SM + TY I++ GLC +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+A FW ++ Y ++ GL ++GN EA +G P+ YN +I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 577 NCACHLDLKSEAYQIVREMKKNGL---NPDCVT-WRILHK 612
+ + +A+ + E ++ GL N CV LHK
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 222/499 (44%), Gaps = 35/499 (7%)
Query: 50 RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVN 109
+ EA + F + + P+ T N+L+ L R+ + L S+ K G P++
Sbjct: 358 KVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM--QKAGLFPNVRT 414
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
+ ++D+ C ++ +A +F +M + P+ +++ +LI+G VG + DA KV+++ML
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGREL----------------------MCKLWE-- 205
+S NS+ Y+ LI+ E G ++ M K E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 206 ---RMSVEVESGVKVA---AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
M E+++ V +++ L+ L + GF NE + + + QG + + Y +I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
D CK G+ + A +++ EMK +GF P+ V Y +I GL K Y
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXX 379
Y L++ V +D+A +L+ +++K +N L A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 380 XXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL 439
SM E +C + +T +ING CK ++A Q+M + P +S+TT+ISGL
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLA 773
Query: 440 DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
A + EA LF R NG P YNA+I GL R DAF ++ G+ +
Sbjct: 774 KAGNIAEAGALFDR-FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 500 TTYTIIVEGLCDCDQIEEA 518
T ++++ L D +E+A
Sbjct: 833 KTCVVLLDTLHKNDCLEQA 851
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/576 (22%), Positives = 232/576 (40%), Gaps = 45/576 (7%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
P S + L + F Q +G P TC ++ +++ + +
Sbjct: 95 PHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
+V+ ++ K F P+ Y L+ F +F M+ G+ P V +TTLI G
Sbjct: 155 VVQ--MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+ G + A + DEM S ++ + + Y+V I
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI--------------------------- 245
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
DS + G + ++ E+ G +EV Y MI LCK R A
Sbjct: 246 -------------DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
+ ++K VP YN +I G G Y Y ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
L + VD+A +V + M +K+ YNI + SM ++ +
Sbjct: 353 LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V T+N +++ CK+ +DEA + ++M K C PD ++F ++I GL RVD+A+ ++
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDY-KVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+ M ++ R + Y +LI+ + R D +Y M++ D ++ +
Sbjct: 471 EK-MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ E+ ++ + ++ + D Y+ ++ GL ++G NE Y + + G + +
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
YNI+I+ C ++AYQ++ EMK G P VT+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 223/527 (42%), Gaps = 10/527 (1%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P V Y ++ C R +A +F ++ P +Y T+I GY S G +A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ + G P+ + Y+ ++ + + G + K++E M + ++ ++ +
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKM----GKVDEALKVFEEM--KKDAAPNLSTYN 381
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+D LCR G + F + + + G M+D LCK + A + EM +
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
P ++ + +I GL K G Y+ Y L++ + +
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
++ K M+ + ++ N Y+ + + D + + +I+G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
K G +E ++ M + C D ++ VI G +V++A+ L M G
Sbjct: 562 LIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE-MKTKGFE 619
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P VVTY ++I GL K+ R ++A+ ++ S I + Y+ +++G +I+EA
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
+++ + + + ++L L ++ NEA + + +PN +Y ILIN C
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+ ++A+ +EM+K G+ P +++ + I G + ++E +L
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTM--ISGLAKAGNIAEAGAL 784
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T+I F D L + Q M + P V FTT+I G RVD A L M
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGFAKEGRVDSALSLLDE-MK 230
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ L +V YN I K+ + + A+ + + ++G+ D TYT ++ LC ++++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
EA + + + + Y ++ G +G F+EA L G P++ +YN ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C + EA ++ EMKK+ P+ T+ IL
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNIL 383
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 234/528 (44%), Gaps = 16/528 (3%)
Query: 45 LCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFV 104
L D EA QCFS P R+CN LL R + + +I A G
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA--GAR 259
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P++ Y+ ++D C A +F +MK RG P+ V+Y ++I+G+ VG + D
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFAN 222
F+EM + EP+ +TY+ LI + L G E + M +G+K V +++
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE----FYREMK---GNGLKPNVVSYST 372
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
LVD+ C+EG + + ++ G + E Y +ID+ CK+G A R+ EM + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTYKVLVEALCHVFDVDKA 341
+ V Y +I GL D + M+ + + +Y L+ ++D+A
Sbjct: 433 VEWNVVTYTALIDGLC-DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
E+L + + +Y ++ M E +A+ + T+++
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+ K+G+ E L +L +M VV+F +I GL V +A D F+R+ + GL+
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDI-EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
+ A+I GL K + A ++ MV G+ D T YT +++G + EA +
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 522 WHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
D + G+ D Y +++ GL +A FL E++ G+ P+
Sbjct: 671 -RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 220/515 (42%), Gaps = 43/515 (8%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+A + F MK P S L++ + +G D ++ F +M+ +G P TY+++I
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
+ +E D+E R L ++ R V + +++D + G ++ EE+
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVP-----DTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+ + Y +I+ CK G+ EMK G P+ V Y+ ++ K+G
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIY 363
+ + ++TY L++A C + ++ A + ML+ GV+ + Y
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEWNVVTYTAL 443
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+ M + ++ + N +I+GF K ++D AL++L + L G+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE-LKGRG 502
Query: 424 CAPDVVSFTTVISGLLDATRVDEA----------------------FDLFHRV------- 454
PD++ + T I GL +++ A D + +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 455 -----MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEG 508
M E + VVT+ LI GL K K + A ++ + +D G+ A++ +T +++G
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
LC +Q+E A + + ++ + D Y +++ G + GN EA ++ + G+ +
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
+ +Y L+ H + +A + EM G++PD
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 179/419 (42%), Gaps = 45/419 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P++V+Y L+D FC A + + DM+ G PN +YT+LI+ C +G + DA
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAA 219
++ +EML+ GVE N +TY+ LI G+ ++ EL K+ +GV +A+
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-------DTAGVIPNLAS 474
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ L+ + + + EL +G + ++YG I LC + + A ++ EMK
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ G + ++Y ++ K G+ G T+ VL++ LC V
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
KA + RI N + +A+ +I
Sbjct: 595 KAVDYF-----------NRISNDF-----------------------GLQANAAIFTAMI 620
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G CK V+ A + + M+ K PD ++T+++ G V EA L + M E G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQ-KGLVPDRTAYTSLMDGNFKQGNVLEALALRDK-MAEIG 678
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
++ ++ Y +L+ GL + A M+ +GI D +++ + I+EA
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 8/314 (2%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
+ L L + +++A + M R KTR N L M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF--CAPDVVSFTTVISGLLDA 441
+ + R V T N +I+ CK G V+ A + ++M KF PD V++ ++I G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMIDGFGKV 310
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R+D+ F M + P V+TYNALI K + Y M +G+ + +
Sbjct: 311 GRLDDTVCFFEE-MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y+ +V+ C +++A F+ D+ + + + Y +++ C+ GN ++A E++
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
GV N+ +Y LI+ C + EA ++ +M G+ P+ ++ L I G V+ +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL--IHGFVKAKN 487
Query: 622 LSEYQSLSINYEGQ 635
+ L +G+
Sbjct: 488 MDRALELLNELKGR 501
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 151/358 (42%), Gaps = 45/358 (12%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG---DCMRGYQXX 310
V+ + L +G A + +MK+ P N ++H K G D R ++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
TY ++++ +C DV+ AR + + M + V
Sbjct: 254 IGAGARPTV---FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV---------------- 294
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
D +T N++I+GF K G +D+ + ++M C PDV++
Sbjct: 295 -------------------PDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVIT 334
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ +I+ ++ + F+R M NGL+P VV+Y+ L+ K A Y M
Sbjct: 335 YNALINCFCKFGKLPIGLE-FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGN 549
G+ + TYT +++ C + +A ++++ G+ N V Y A++ GLC +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML-QVGVEWNVVTYTALIDGLCDAER 452
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
EA ++ +GV PN+ SYN LI+ A +++ E+K G+ PD + +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C P F + S L+D ++EA F + M + P + N L+ KL + +D
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSK-MKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG 543
+ M+ G TY I+++ +C +E A+ + ++ + + D Y +++ G
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
+ G ++ F E+ D P++ +YN LINC C + REMK NGL P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 604 CVTWRIL 610
V++ L
Sbjct: 367 VVSYSTL 373
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 237/547 (43%), Gaps = 17/547 (3%)
Query: 74 NVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDM 133
NVL+ L + + L ++ + +PSL+ Y+ L+D +C P + ++ M
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARR--LLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
K P+++++ TL+ G G + DA V EM + G P++ T+S+L G
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 194 EGGRELMCKLWERMSVEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
E ++E V+SGVK+ A+ + L+++LC+EG + I +G +
Sbjct: 336 EAA----LGVYE---TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
EV+Y MID C+ G GA + M+K+G P + YN +I + G+ +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY +L+ ++ DK ++LK M + Y +
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M + V N +I+G C G +++A + ++ML K ++V++
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNLVTY 567
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
T+I GL ++ EA DL + GL+P V TYN+LI G +Y M
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
GI TY +++ LC + IE + + ++ S D VY +L G+
Sbjct: 627 RSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDME 682
Query: 552 EACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILH 611
+A + ++++ + + +YN LI + E ++ EM + P+ T+ I+
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 612 KIQGKVR 618
K +V+
Sbjct: 743 KGHCEVK 749
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 137/603 (22%), Positives = 244/603 (40%), Gaps = 28/603 (4%)
Query: 27 ATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVP------------------ 68
A P++P L L NR A S L S S P
Sbjct: 47 APPTNPVTGDEKLRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSL 106
Query: 69 DHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
H +LL+ LL + + + + A + G PS + L+D ++
Sbjct: 107 KHDFSYLLLSVLL-NESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTIN 165
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F ++ P+ Y I + +G ++F+ M + P+ Y+VLI G+
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
+ + + +L ++ R + + + L+D C+ G + F++ E +
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLP-----SLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+ + ++ L K G A ++ EMK GFVP ++ + G + +
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
+T +L+ ALC ++KA E+L + K V IYN +
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
+M + + D + N +I FC+ G ++ A K + M + K +P V
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL-KGVSPSV 459
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
++ +I G D+ FD+ + M +NG P VV+Y LI L K + +A V
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDIL-KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRS 547
M G+ Y ++++G C +IE+A F +++ GI N V Y ++ GL +
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNLVTYNTLIDGLSMT 577
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
G +EA L E+ G+ P++F+YN LI+ + EMK++G+ P T+
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 608 RIL 610
+L
Sbjct: 638 HLL 640
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 155/705 (21%), Positives = 281/705 (39%), Gaps = 110/705 (15%)
Query: 23 STTIATP---------SSPSLQHSIATTLHA--LCDSNRFSEAHQCFSISLASGSVPDHR 71
ST A+P SSPSL+H + L + L +S SEA F G P
Sbjct: 86 STPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSD 145
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVA--KPG--------------------------- 102
+ +LL L++++ T + +++ + +P
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 103 ----FVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
PS+ Y+ L+D C +R DA ++F +M R P++++Y TLI+GYC G
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER------------ 206
+ KV + M +EP+ +T++ L++G+ + +E ++ ++ +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 207 ----------------MSVEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGS 248
V+SGVK+ A+ + L+++LC+EG + I +G
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+ EV+Y MID C+ G GA + M+K+G P + YN +I + G+ +
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
TY +L+ ++ DK ++LK M + Y +
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
M + V N +I+G C G +++A + ++ML K ++
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNL 564
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
V++ T+I GL ++ EA DL + GL+P V TYN+LI G +Y
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHD-------VIWPSGIH--------- 532
M GI TY +++ LC + IE + + + +++ +H
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 533 ----------------DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
D Y +++ G + G E + E+ + P +YNI++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPD-CVTWRILHKIQGKVRKQ 620
C + AY REM++ G D C+ ++ ++ + R +
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSK 787
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 197/485 (40%), Gaps = 50/485 (10%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
++ + L+ALC + +A + +A G VP+ N ++ R + + +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+ K G P + Y+ L+ +FC +A + MK +G P+V +Y LI GY
Sbjct: 415 M--EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
+ EM ++G PN ++Y LI + + G + L ++ +R +
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK-----GSKLLEAQIVKRDMEDRGVSP 527
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
KV + L+D C +G + FR ++E+ +G V Y +ID L G+ A ++
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
E+ ++G P YN +I G G+ R TY +L+ +LC
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCT- 645
Query: 336 FDVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
KEG++ T R++ E + D++
Sbjct: 646 ---------------KEGIELTERLFG-----------------------EMSLKPDLLV 667
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N V++ + G +++A LQ ++ K D ++ ++I G L ++ E L
Sbjct: 668 YNGVLHCYAVHGDMEKAFN-LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE- 725
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M + P TYN +++G ++K A+ Y M G D +V GL + +
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 515 IEEAK 519
+EA+
Sbjct: 786 SKEAE 790
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 151/379 (39%), Gaps = 15/379 (3%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ C+ A + + G P T N+L+ R + + +++ +
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM--EDN 488
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P++V+Y L++ C + +A + DM++RG P V Y LI+G CS G I DA
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
+ EML+ G+E N +TY+ LI G+ L +L+ ++ + G+K V
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK-------GLKPDVFT 601
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +L+ G + EE+ G Y +I SLC R+ EM
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS 660
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ P ++YN ++H GD + + TY L+ V +
Sbjct: 661 LK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+ R ++ M +E + YNI ++ M E DV N ++
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 400 NGFCKTGSVDEALKVLQDM 418
+G + EA V+ +M
Sbjct: 778 SGLKEEWRSKEAEIVISEM 796
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/565 (23%), Positives = 240/565 (42%), Gaps = 90/565 (15%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI--VA 99
LH+L +F+EA F+ + S +P + +LL ++ + +V +L +
Sbjct: 48 LHSL----QFNEALDLFTHMVESRPLPSI----IDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
G L + LM+ FC +P A M G P++V++T+LING+C +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A + ++M+E G++P+ + Y+ +I
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTII----------------------------------- 184
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
DSLC+ G N + +++ G + V+Y +++ LC GR+ A ++ M
Sbjct: 185 -----DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
KR P + +N +I K+G + + TY L+ C VD
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+AR++ LM K C DV+ ++I
Sbjct: 300 EARQMFYLMETK-----------------------------------GCFPDVVAYTSLI 324
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
NGFCK VD+A+K+ +M K + +++TT+I G + + A ++F M G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQ-KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH-MVSRG 382
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS---DGIGADSTTYTIIVEGLCDCDQIE 516
+ P + TYN L+ L + A ++ M DG+ + TY +++ GLC ++E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+A + D+ Y I++G+C++G A + L GV PN+ +Y +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 577 NCACHLDLKSEAYQIVREMKKNGLN 601
+ LK EA+ + R+MK++G++
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 210/509 (41%), Gaps = 78/509 (15%)
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
AL S ++ +V + NY ++ + +A +F M P+++ +T L+N
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
+ + D + GV + T ++L+ Q + K+ ++ E
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM-KLGFE 139
Query: 211 VESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG 270
+ + F +L++ C E + ++ G + V+Y +IDSLCK G +
Sbjct: 140 PD----IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 271 AARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
A + +M+ G P V+Y +++GL G T+ L++
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 331 ALCHVFDVDKAREVLKLMLRKEG--VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQC 388
A KEG +D +YN M+
Sbjct: 256 AFV-----------------KEGKFLDAEELYN--------------------EMIRMSI 278
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
++ T ++INGFC G VDEA ++ ++ K C PDVV++T++I+G +VD+A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+F+ M + GL +TY LI+G ++ +PN A V+S MVS G+ + TY +++
Sbjct: 338 KIFYE-MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
LC ++++A + D + + GV+PN
Sbjct: 397 LCYNGKVKKALMIFED--------------------------------MQKREMDGVAPN 424
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKK 597
I++YN+L++ C+ +A + +M+K
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDA 441
M++ D++T ++INGFC ++EA+ ++ M+ MG PDVV +TT+I L
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG--IKPDVVMYTTIIDSLCKN 190
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
V+ A LF + M G+RP VV Y +L+ GL R DA + M I D T
Sbjct: 191 GHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
+ +++ + +A+ ++++I S + F Y +++ G C G +EA Y +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
G P++ +Y LIN C +A +I EM + GL + +T+ L + G+V K
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 622 LSE 624
+++
Sbjct: 370 VAQ 372
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M+E + DV+ T+I+ CK G V+ AL + D + PDVV +T++++GL ++
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF-DQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R +A D R M + ++P V+T+NALI K + DA +Y+ M+ I + T
Sbjct: 226 GRWRDA-DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT ++ G C ++EA+ ++ + D Y +++ G C+ ++A YE+
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK---IQGKVR 618
G++ N +Y LI + + A ++ M G+ P+ T+ +L GKV+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 619 KQTL 622
K +
Sbjct: 405 KALM 408
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 178/421 (42%), Gaps = 45/421 (10%)
Query: 209 VEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRY 268
VE + F L++ + + F+ V + + L G + +++ C+ +
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123
Query: 269 HGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHT-YKV 327
+ A+ + +M K GF P V + +I+G G+ M D Y
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCL-GNRMEEAMSMVNQMVEMGIKPDVVMYTT 182
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
++++LC V+ A + D+ Y I
Sbjct: 183 IIDSLCKNGHVNYALSLF---------DQMENYGI------------------------- 208
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
R DV+ +++NG C +G +A +L+ M K PDV++F +I + + +A
Sbjct: 209 -RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI-KPDVITFNALIDAFVKEGKFLDA 266
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
+L++ M + P + TY +LI G ++A ++ M + G D YT ++
Sbjct: 267 EELYNE-MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
G C C ++++A ++++ + Y +++G + G N A +V GV P
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKK---NGLNPDCVTWRI-LHKI--QGKVRKQT 621
NI +YN+L++C C+ +A I +M+K +G+ P+ T+ + LH + GK+ K
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 622 L 622
+
Sbjct: 446 M 446
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
+EAL + M+ + P ++ FT +++ + + D +L + G+ + T N
Sbjct: 54 NEALDLFTHMVESR-PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM-GVSHDLYTCN 111
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
L+ + +P A M+ G D T+T ++ G C +++EEA S + ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
D +Y I+ LC++G+ N A ++ + G+ P++ Y L+N C+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 589 YQIVREMKKNGLNPDCVTWRIL 610
++R M K + PD +T+ L
Sbjct: 232 DSLLRGMTKRKIKPDVITFNAL 253
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 42/411 (10%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G+ P +V + L++ FC R DA + M G+ P+ V++TTLI+G
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A + D M++ G +P+ +TY ++ G+ + D + L+ K+ + ++E+ V +
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME---AAKIEANVVI-- 255
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
++ ++DSLC+ ++ + E+ +G + Y +I LC GR+ A+R++ +M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+R P+ V ++ +I K G ++ + TY L+ C + +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A+++L+LM+RK+ C +V+T NT+I
Sbjct: 376 EAKQMLELMIRKD-----------------------------------CLPNVVTYNTLI 400
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
NGFCK VD+ +++ ++M + V++TT+I G A D A +F + M G
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQ-MVSVG 458
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+ P ++TYN L+ GL K + A V+ + + D TY I++EG+C
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 168/394 (42%), Gaps = 37/394 (9%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ F+ L+ ++ + F+ V E++ G Y +I+ C+ R A ++
Sbjct: 78 IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLG 137
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M K G+ P V N +++G T+ L+ L F
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL---F 194
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+KA E + L+ R M++ C+ D++T
Sbjct: 195 LHNKASEAVALIDR--------------------------------MVQRGCQPDLVTYG 222
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
V+NG CK G D AL +L M K A +VV ++TVI L D+A +LF M
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTE-ME 280
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
G+RP V+TY++LI L R +DA + S M+ I + T++ +++ ++
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+A+ + ++I S + F Y++++ G C EA L ++ PN+ +YN LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
N C + ++ REM + GL + VT+ L
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 7/330 (2%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T +H L N+ SEA + G PD T ++ L + L+ +
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
AK ++V Y ++D C +R DA +F +M+N+G PNV++Y++LI+ C+ G
Sbjct: 245 EAAK--IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
DA ++ +M+E + PN +T+S LI +++ L KL+E M ++
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE----KLYEEM-IKRSIDPN 357
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ +++L++ C E ++ E + + L V Y +I+ CK R +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +RG V + V Y +IHG + DC TY +L++ LC
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
+ KA V + + R YNI +
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 200/485 (41%), Gaps = 44/485 (9%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++A+ PS++ + +L+ + M+ G N+ +Y LIN +C
Sbjct: 68 VMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCS 127
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A + +M++ G EP+ +T + L+ G G +
Sbjct: 128 RLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH------------------------GNR 163
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
++ LVD + G+ + V + +I L + A ++
Sbjct: 164 ISDAVALVDQMVEMGY----------------KPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M +RG P V Y +++GL K GD Y ++++LC
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D A + M K Y+ + M+E + +++T +
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I+ F K G + +A K+ ++M+ + P++ +++++I+G R+ EA + ++
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMI-KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
++ L P VVTYN LI G K KR + ++ M G+ ++ TYT ++ G +
Sbjct: 387 KDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 517 EAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
A+ + ++ G+H N + Y +L GLC++G +A L S + P+I++YNI+
Sbjct: 446 NAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 576 INCAC 580
I C
Sbjct: 505 IEGMC 509
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 191/453 (42%), Gaps = 7/453 (1%)
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ DA +F M +S P+ + +S L+ + + + L+ E+M + + +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVISFGEKMEI-LGISHNL 113
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ L++ CR + + ++ G + V +++ C R A +V +
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M + G+ P V + +IHGL TY +V LC D
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
D A +L M + IY+ + + M R +VIT ++
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+ C G +A ++L DM+ K P++V+F+ +I + ++ +A L+ M +
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKI-NPNLVTFSALIDAFVKKGKLVKAEKLYEE-MIK 351
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+ P + TY++LI G L R +A + M+ + TY ++ G C ++++
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ ++ + + Y ++ G ++ + + A ++V GV PNI +YNIL++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
C ++A + ++++ + PD T+ I+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 9/269 (3%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+T + +LC +A F+ G P+ T + L++ L L+ +I
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
K P+LV + L+D F + A +++ +M R PN+ +Y++LING+C + +
Sbjct: 317 RKIN--PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
G+A+++ + M+ PN +TY+ LI G + + ++ G EL ++ +R V
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG-----NTV 429
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+ L+ + + + +++ G + Y ++D LCK G+ A +V+E
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL-AKAMVVFEY 488
Query: 279 KKRGFVPSDVL-YNYIIHGLTKDGDCMRG 306
+R + D+ YN +I G+ K G G
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/619 (22%), Positives = 255/619 (41%), Gaps = 31/619 (5%)
Query: 10 LKPKPFIPFSLRFSTTIATPSS-PSLQHSIATTLHALCDSNRFSEAHQCF--SISLASGS 66
++ KP I F RF I S + + A L L +++ SEA+ SI L
Sbjct: 95 IRVKPEIAF--RFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHE 152
Query: 67 VPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAK----------PGFVPSLVNYHRLMDQ 116
+ D + L W + + K GF+PS+ N + ++
Sbjct: 153 IDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKV 212
Query: 117 FCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPN 176
R A ++ M G P V+++ T+++ G + K++ EM +E +
Sbjct: 213 LRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFS 272
Query: 177 SLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA--AFANLVDSLCREGFFN 234
+TY++LI G + +E R + SG V +F L++ C++G F+
Sbjct: 273 EVTYNILINGFSKNGKMEEARRFHGDM-------RRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
+ + + +E+ G Y I +LC GR A ++ M P V YN ++
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLM 381
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
HG K G + TY L++ LC +++ A+ + + M +
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 355 DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
Y ++ ML + D T G + G D+A ++
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
++M+ APD+ + I GL + +A + F R + GL P VTY +IRG
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
+ + A +Y M+ + TY +++ G ++E+A + + + G+ N
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE-MKKRGVRPN 619
Query: 535 -FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
+ A+L G+C++GN +EA +L ++ + G+ PN +SY +LI+ C + E ++ +
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 594 EMKKNGLNPDCVTWRILHK 612
EM + PD T R L K
Sbjct: 680 EMLDKEIEPDGYTHRALFK 698
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 224/532 (42%), Gaps = 23/532 (4%)
Query: 18 FSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLL 77
F L F I PS+++ L L DS ++A + + G +P T N +L
Sbjct: 187 FLLSFEKMIRKGFLPSVRNC-NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 245
Query: 78 ARLLRS---RTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMK 134
++ + W L + + S V Y+ L++ F + +A R DM+
Sbjct: 246 DSCFKAGDLERVDKIW-----LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 135 NRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLE 194
G S+ LI GYC G DA V DEML +G+ P + TY++ I + ++
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 195 GGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
REL+ + + V ++ L+ + G F E + ++L V
Sbjct: 361 DARELLSSM---------AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y +ID LC+ G GA R+ EM + P + Y ++ G K+G+ +
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKE--GVDKTRIYNIYLRAXXXXXX 372
+ Y + D DKA + + M+ + D T IYN+ +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT-IYNVRIDGLCKVGN 530
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
+ D +T TVI G+ + G A + L D ++ K P V+++
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA-RNLYDEMLRKRLYPSVITYF 589
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
+I G A R+++AF + M + G+RP V+T+NAL+ G+ K ++A+ M
Sbjct: 590 VLIYGHAKAGRLEQAFQ-YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
+GI + +YT+++ CD ++ EE + +++ D + + A+ K L
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 183/391 (46%), Gaps = 5/391 (1%)
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+F ++ +LC+ F + + +P + L + Y ++D LCK R A ++ EM
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
+ G PS V+YN +I GL K GD R + + TY L+ LC +
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
DKA +L+ M+ + + Y + SM E + + +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
I+G K G +EA+ + + M K C P++V ++ ++ GL + +EA ++ +R M +
Sbjct: 369 ISGLFKEGKAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR-MIAS 426
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
G P TY++L++G +K +A V+ M G + Y+++++GLC +++EA
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 519 KSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV---DSGVSPNIFSYNIL 575
W ++ D Y++I+KGLC G+ + A +E++ + P++ +YNIL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
++ C S A ++ M G +PD +T
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 15/463 (3%)
Query: 123 PCDAHRIFFDMKNRGHCP-NVVSYTTLINGYCSVGGIGDARKVFDEMLESG----VEPNS 177
P A +F M + C +V S+ +++N + G + +D ++ S + PN
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 178 LTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVF 237
L+++++I+ + + R ++ E+ + ER + + L+D LC+E +E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP-----DGYTYCTLMDGLCKEERIDEAV 242
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGL 297
+ +E+ +G V+Y +ID LCK G ++V M +G VP++V YN +IHGL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 298 TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
G + D TY L+ L A +L M +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
IY++ + M E C+ +++ + +++G C+ G +EA ++L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
M+ C P+ ++++++ G +EA ++ M + G Y+ LI GL +
Sbjct: 423 MI-ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE-MDKTGCSRNKFCYSVLIDGLCGV 480
Query: 478 KRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW---PSGIHDN 534
R +A V+S M++ GI D+ Y+ I++GLC ++ A +H+++ P D
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 535 FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
Y +L GLC + + A L ++D G P++ + N +N
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 9/425 (2%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P+ ++++ ++ C R A +F M R P+ +Y TL++G C I +A +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
DEM G P+ + Y+VLI G+ ++ DL +L+ ++ + V E + L+
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE-----VTYNTLI 299
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
LC +G ++ + E + + +V YG +I+ L K R A R++ M++RG+
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
+ +Y+ +I GL K+G Y VLV+ LC ++A+E+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 345 LKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCK 404
L M+ + Y+ ++ M ++ C + + +I+G C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 405 TGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM--PENGLRP 462
G V EA+ V ML PD V+++++I GL +D A L+H ++ E +P
Sbjct: 480 VGRVKEAMMVWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD-CDQIEEAKSF 521
VVTYN L+ GL K + A + +SM+ G D T + L + + ++ +SF
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 522 WHDVI 526
+++
Sbjct: 599 LEELV 603
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 170/379 (44%), Gaps = 9/379 (2%)
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR----IVYEMKKRGFVPSDVLYNYI 293
R+ +E C+ S+ + +++ + G YH +V P+ + +N +
Sbjct: 137 RMVDEFRCKRSVKS---FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
I L K R + +TY L++ LC +D+A +L M +
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 354 VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
IYN+ + +M C + +T NT+I+G C G +D+A+
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
+L+ M+ K C P+ V++ T+I+GL+ R +A L M E G Y+ LI G
Sbjct: 314 LLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYHLNQHIYSVLISG 371
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
L+K + +A ++ M G + Y+++V+GLC + EAK + +I + +
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
+ Y++++KG ++G EA E+ +G S N F Y++LI+ C + EA +
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 594 EMKKNGLNPDCVTWRILHK 612
+M G+ PD V + + K
Sbjct: 492 KMLTIGIKPDTVAYSSIIK 510
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 175/433 (40%), Gaps = 69/433 (15%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC + + G VP+ T N L+ L + +L+ ++ +K
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK- 322
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
+P+ V Y L++ RR DA R+ M+ RG+ N Y+ LI+G G +A
Sbjct: 323 -CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA-- 219
++ +M E G +PN + YSVL+ G+ +E +E++ ++ + SG A
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-------IASGCLPNAYT 434
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+++L+ + G E ++ +E+ G + Y +ID LC VGR A + +M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 280 KRGFVPSDVLYNYIIHGLTKDGD---CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
G P V Y+ II GL G ++ Y TY +L++ LC
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D+ +A ++L SML+ C DVIT N
Sbjct: 555 DISRAVDLLN-----------------------------------SMLDRGCDPDVITCN 579
Query: 397 TVINGFC-KTGSVDEALKVLQDM-------------------LMGKFCAPDVVSFTTVIS 436
T +N K+ S D+ L+++ ++GK+ AP ++ ++
Sbjct: 580 TFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639
Query: 437 GLLDATRVDEAFD 449
+ +++ A D
Sbjct: 640 EICKPKKINAAID 652
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
V + K D+A+ + M+ C V SF +V++ +++ + + V+
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 457 EN---GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
N + P +++N +I+ L KL+ + A V+ M D TY +++GLC +
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE 236
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+I+EA ++ +Y ++ GLC+ G+ + + G PN +YN
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
LI+ C +A ++ M + P+ VT+ L I G V+++ ++
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL--INGLVKQRRATD 345
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 230/559 (41%), Gaps = 49/559 (8%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHR 112
EA Q S S ++PD TCN + +L+ S + + + L+ G+ P +++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLV--SRGYTPHRSSFNS 61
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
++ C + A I M G P+V+SY +LI+G+C G I A V LES
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV----LES- 116
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
L +CK + +F +L + +
Sbjct: 117 --------------------LRASHGFICK------------PDIVSFNSLFNGFSKMKM 144
Query: 233 FNEVF-RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+EVF + L C V Y ID+ CK G A + + MK+ P+ V +
Sbjct: 145 LDEVFVYMGVMLKCCS--PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G K GD TY L++ C ++ +A E+ M+
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
+ +Y + ML R D+ +I+G C G + EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++++DM PD+V FTT+++ + R+ A +++H+++ E G P VV + +I
Sbjct: 323 TEIVEDMEKSDL-VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPDVVALSTMI 380
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G+ K + ++A VY + A+ YT++++ LC E + + + +
Sbjct: 381 DGIAKNGQLHEAI-VYFCIEK----ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
D F+Y + + GLC+ GN +A +V G+ ++ +Y LI L EA Q+
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 592 VREMKKNGLNPDCVTWRIL 610
EM +G++PD + +L
Sbjct: 496 FDEMLNSGISPDSAVFDLL 514
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+++ G VP Y + C DA ++ M G ++++YTTLI G S G
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGL 488
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+ +AR+VFDEML SG+ P+S + +LIR +E ++ +L+ + R
Sbjct: 489 MVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/626 (23%), Positives = 249/626 (39%), Gaps = 55/626 (8%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLA-SGSVPDHRTCNVLLARLLRSRTPLQTWALV 93
+++ LHA +S S+A + + + SVPD CN LL+ L++SR
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR----LGDA 189
Query: 94 RSLIVAKPGFVPSLVNYHR--LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
R + S+ NY L+ C + ++ +G PN+V Y T+I G
Sbjct: 190 RKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGG 249
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER----- 206
YC +G I +A VF E+ G P T+ +I G +E D L+ ++ ER
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS 309
Query: 207 -------MSVEVESGVK------------------VAAFANLVDSLCREGFFNEVFRIAE 241
+ + G K VA + L++ LC+EG +
Sbjct: 310 VWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
E +G + + Y +I + CK Y A++++ +M +RG P V Y +IHGL G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
Y +L+ LC A+ + ML + + +Y
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
+ +E + DV+ N +I GFC++G +DEAL + M
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM-NE 548
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
+ PD +++T+I G + + A +F R M +N +P VVTY +LI G
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIF-RYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLC-DCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
A + M + + TYT ++ L + +E+A +W ++ + + + +
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 541 LKGLCRS--------------GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
L+G + G + F + + G S + +YN + C C +
Sbjct: 668 LQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVK 727
Query: 587 EAYQIVREMKKNGLNPDCVTW-RILH 611
A +M K G +PD V++ ILH
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILH 753
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 199/485 (41%), Gaps = 81/485 (16%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+V++ +L++ +GDARKV+DEM + G ++ + +L++G
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKG------------- 214
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+C EG ++ E +G + V Y +I
Sbjct: 215 ---------------------------MCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
CK+G A + E+K +GF+P+ + +I+G K+GD + +
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307
Query: 320 XCDHTYKVLVEA-LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXX 378
+++A H + VD A +
Sbjct: 308 VSVWFLNNIIDAKYRHGYKVDPAESI---------------------------------- 333
Query: 379 XXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
++ + C+ DV T N +IN CK G + A+ L D K P+ +S+ +I
Sbjct: 334 --GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFL-DEASKKGLIPNNLSYAPLIQAY 390
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
+ D A L + M E G +P +VTY LI GL +DA + ++ G+ D
Sbjct: 391 CKSKEYDIASKLLLQ-MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
+ Y +++ GLC + AK + +++ + + D +VYA ++ G RSG+F+EA
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
V+ GV ++ +N +I C + EA + M + L PD T+ + I G V+
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI--IDGYVK 567
Query: 619 KQTLS 623
+Q ++
Sbjct: 568 QQDMA 572
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/566 (20%), Positives = 219/566 (38%), Gaps = 61/566 (10%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
+S + +C+ + + G +P+ N ++ + + + +
Sbjct: 205 NYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFK 264
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRG----------------- 137
L + GF+P+L + +++ FC + R+ ++K RG
Sbjct: 265 ELKLK--GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 138 -----------------HC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLT 179
C P+V +Y LIN C G A DE + G+ PN+L+
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 180 YSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVF 237
Y+ LI+ + ++ + +L+ ++ ER G K + + L+ L G ++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAER-------GCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGL 297
+ +L +G + +Y ++ LCK GR+ A + EM R +P +Y +I G
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 298 TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
+ GD + + +++ C +D+A + M + V
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
Y+ + M +++C+ +V+T ++INGFC G A + ++
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYK- 476
M + P+VV++TT+I L + E + +M N P VT+N L++G K
Sbjct: 616 MQLRDL-VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 477 -----LKRPNDAFGVYSS--------MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
L P+ + SS M SDG + Y + LC ++ A F
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 524 DVIWPSGIHDNFVYAAILKGLCRSGN 549
++ D +AAIL G C GN
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 116/303 (38%), Gaps = 25/303 (8%)
Query: 11 KPKPFIPFSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDH 70
K F+P L FS + P + AT + S F EA + FS+S+ G D
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPD-AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520
Query: 71 RTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIF 130
N ++ RS + A + + + VP Y ++D + + A +IF
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRM--NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 131 FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQE 190
M+ PNVV+YT+LING+C G A + F EM + PN +TY+ LIR + +E
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 191 RDLEGGRELMCKLWERMSV------EVESGVKVAAFANLVDSLC----------REGFFN 234
E WE M EV + F + F+
Sbjct: 639 ---SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS 695
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
E F + G Y + LC G A +M K+GF P V + I+
Sbjct: 696 EFFH---RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 295 HGL 297
HG
Sbjct: 753 HGF 755
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
+ + V+ ++ + +A +++ V+ P V+ N+L+ L K +R DA VY
Sbjct: 136 ALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDE 195
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSG 548
M G D+ + I+V+G+C+ ++E + W G N V Y I+ G C+ G
Sbjct: 196 MCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGR-WGKGCIPNIVFYNTIIGGYCKLG 254
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ A EL G P + ++ +IN C + +++ E+K+ GL W
Sbjct: 255 DIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR--VSVWF 312
Query: 609 ILHKIQGKVR 618
+ + I K R
Sbjct: 313 LNNIIDAKYR 322
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 36/564 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC+++ F EA + A+ +P+ T + LL L + + ++ +++
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMM--E 366
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC------SV 155
G PS ++ L+ +C A+++ M GH P V Y LI C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
+ A K + EML +GV N + S R + E ++ ++ + +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP----- 481
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ ++ +++ LC F + EE+ G +A+ Y M+DS CK G A +
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM++ G P+ V Y +IH K + TY L++ C
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
V+KA ++ + M + V +Y ++ R +V+T
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMY-------------------FKQYDDNSERPNVVTY 642
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+++GFCK+ V+EA K+L M M + C P+ + + +I GL ++DEA ++ M
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSM-EGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEM 700
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
E+G + TY++LI +K+KR + A V S M+ + + YT +++GLC +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 516 EEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
+EA ++ G N V Y A++ G G L + GV+PN +Y +
Sbjct: 761 DEAYKLMQ-MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 575 LINCACHLDLKSEAYQIVREMKKN 598
LI+ C A+ ++ EMK+
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQT 843
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/599 (24%), Positives = 243/599 (40%), Gaps = 86/599 (14%)
Query: 54 AHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRL 113
A + +S LA+G V + + L + + ++++R +I GF+P Y ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI--GQGFIPDTSTYSKV 489
Query: 114 MDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV 173
++ C + A +F +MK G +V +YT +++ +C G I ARK F+EM E G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFF 233
PN +TY+ LI L+ + + E L+E M E + ++ L+D C+ G
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANE----LFETMLSE-GCLPNIVTYSALIDGHCKAGQV 604
Query: 234 NEVFRIAEELPCQGSLAE----------------EVVYGQMIDSLCKVGRYHGAARIVYE 277
+ +I E + + + V YG ++D CK R A +++
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M G P+ ++Y+ +I GL K G + +TY L++ V
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
D A +VL MLE+ C +V+
Sbjct: 725 QDLASKVLS-----------------------------------KMLENSCAPNVVIYTE 749
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+G CK G DEA K++Q M+ K C P+VV++T +I G +++ +L R M
Sbjct: 750 MIDGLCKVGKTDEAYKLMQ-MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER-MGS 807
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
G+ P VTY LI K + A + M + Y ++EG
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG--------- 858
Query: 518 AKSFWHDVIWPSGIHDNF----------VYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
F + I G+ D VY ++ L ++ A L E+ +
Sbjct: 859 ---FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 568 NIFS--YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
+S YN LI C + A+Q+ EM K G+ P+ ++ L I+G R +SE
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL--IKGLFRNSKISE 972
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/527 (22%), Positives = 212/527 (40%), Gaps = 62/527 (11%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+ V YT LI+G C +A + M + PN +TYS L+ G L ++ L GR
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL--GR-- 355
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
CK M + F +LV + C G + +++ +++ G + VVY +I
Sbjct: 356 -CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 260 DS-----------------------------------------LCKVGRYHGAARIVYEM 278
S LC G+Y A ++ EM
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
+GF+P Y+ +++ L + +TY ++V++ C +
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
++AR+ M Y + A +ML C +++T + +
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCA---------------PDVVSFTTVISGLLDATR 443
I+G CK G V++A ++ + M K P+VV++ ++ G + R
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
V+EA L M G P + Y+ALI GL K+ + ++A V + M G A TY+
Sbjct: 655 VEEARKLLD-AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+++ + + A ++ S + +Y ++ GLC+ G +EA + + +
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G PN+ +Y +I+ + +++ M G+ P+ VT+R+L
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 200/525 (38%), Gaps = 51/525 (9%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG----REL---- 199
L+ +C G A + + + P+ TY+ LI+ L+ L+ RE+
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 200 --------------MCKL--WER--MSVEVESGVKVAAF-ANLVDSLCREGFFNEVFRIA 240
+CK+ W VE E+ V F L+ LC F E
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
+ L V Y ++ + R++ M G PS ++N ++H
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD------VDKAREVLKLMLRKEGV 354
GD Y+ Y +L+ ++C D +D A + ML V
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 355 DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+ + R M+ D T + V+N C ++ A +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
++M G A DV ++T ++ A +++A F+ M E G P VVTY ALI
Sbjct: 506 FEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQARKWFNE-MREVGCTPNVVTYTALIHAY 563
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD- 533
K K+ + A ++ +M+S+G + TY+ +++G C Q+E+A + + + D
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 534 --------------NFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
N V Y A+L G C+S EA L + G PN Y+ LI+
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 579 ACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLS 623
C + EA ++ EM ++G T+ L KV++Q L+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
LN ++ C+ GS AL+ L + +F P ++ +I L A R+D A L HR
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRF-RPSRSTYNCLIQAFLKADRLDSA-SLIHRE 260
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M LR T L K+ + +A + + + D+ YT ++ GLC+
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASL 317
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
EEA F + + S + + Y+ +L G L ++ G P+ +N
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L++ C S AY+++++M K G P V + IL
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 202/443 (45%), Gaps = 7/443 (1%)
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA +F EML+S P+ + ++ ++ + + + ++ L+ +M + + +
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD----IVIYLYHKME-NLGISHDLYS 116
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F L+ CR + + ++ G V G +++ C+ R+ A +V M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
GFVP+ V+YN +I+GL K+ D + TY L+ L +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A +L+ M++++ + + M+ +V T N++I
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
NGFC G + +A K + D+++ K C PDVV++ T+I+G + RV++ LF M G
Sbjct: 297 NGFCIHGCLGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE-MTYQG 354
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
L TYN LI G + + N A V++ MV G+ D TY I+++ LC+ +IE+A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
D+ D Y I++GLCR+ EA L GV P+ +Y +I+
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 580 CHLDLKSEAYQIVREMKKNGLNP 602
C L+ EA ++ R MK++G P
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMP 497
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 204/484 (42%), Gaps = 52/484 (10%)
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
++L ++ ++P +PS+V++ R++ + ++ M+N G ++ S+T L
Sbjct: 63 AFSLFCEMLQSRP--IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
I+ +C + A + +M++ G P+ +T L+ G Q + L
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL--------- 171
Query: 209 VEVESGV----KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
V+ G V + +++ LC+ N + + +G A+ V Y +I L
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231
Query: 265 VGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHT 324
GR+ AAR++ +M KR P+ + + +I K+G+ +
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL-------------------- 271
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
+AR + K M+R+ V YN + M+
Sbjct: 272 ---------------EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
C DV+T NT+I GFCK+ V++ +K+ +M D ++ T+I G A ++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-DAFTYNTLIHGYCQAGKL 375
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
+ A +F+R M + G+ P +VTYN L+ L + A + + + D TY I
Sbjct: 376 NVAQKVFNR-MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
I++GLC D+++EA + + D Y ++ GLCR G EA + + G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 565 VSPN 568
P+
Sbjct: 495 FMPS 498
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 157/378 (41%), Gaps = 7/378 (1%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K GF PS+V L++ FC R +A + M G PNVV Y T+ING C
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ +A +VF M + G+ +++TY+ LI G+ GR R V+ + V
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNS-----GRWTDAARLLRDMVKRKIDPNV 254
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
F L+D+ +EG E + +E+ + + Y +I+ C G A +
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M +G P V YN +I G K G + TY L+ C
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
++ A++V M+ YNI L + +S+ D+IT N
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I G C+T + EA + + L K PD +++ T+ISGL EA D R M E
Sbjct: 435 IIQGLCRTDKLKEAWCLFRS-LTRKGVKPDAIAYITMISGLCRKGLQREA-DKLCRRMKE 492
Query: 458 NGLRPCVVTYNALIRGLY 475
+G P Y+ +R Y
Sbjct: 493 DGFMPSERIYDETLRDHY 510
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 11/328 (3%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T ++ LC + + A + F G D T N L++ L S L+R ++
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV-- 246
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K P+++ + L+D F +A ++ +M R PNV +Y +LING+C G +G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA+ +FD M+ G P+ +TY+ LI G + + +E G +L C++ G+ A
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-------TYQGLVGDA 359
Query: 220 FA--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
F L+ C+ G N ++ + G + V Y ++D LC G+ A +V +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
++K + YN II GL + + Y ++ LC
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLR 365
+A ++ + M + RIY+ LR
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYDETLR 507
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 199/475 (41%), Gaps = 48/475 (10%)
Query: 50 RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI--VAKPGFVPSL 107
+F++A F+ + S +P + RLL + + +V SL + G P L
Sbjct: 63 QFNDALDLFTRMVHSRPLPSI----IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ +M C+ +PC A M G P++V++T+L+NGYC I DA +FD+
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
+L G +PN +TY+ LIR L
Sbjct: 179 ILGMGFKPNVVTYTTLIR----------------------------------------CL 198
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
C+ N + ++ GS V Y ++ LC++GR+ AA ++ +M KR P+
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
+ + +I K G M + TY L+ LC +D+AR++ L
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M R IY + M + A+ IT +I G+C G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
D A +V M + PD+ ++ ++ GL +V++A +F M + + +VTY
Sbjct: 379 PDVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE-YMRKREMDINIVTY 436
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFW 522
+I+G+ KL + DAF ++ S+ S G+ + TYT ++ G C I EA S +
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 207/481 (43%), Gaps = 46/481 (9%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
DA +F M + P+++ +T L++ + +F++M G+ P T ++++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 185 RGV-LQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
V L + C L + M + E + F +L++ C + + +++
Sbjct: 126 HCVCLSSQPCRAS----CFLGKMMKLGFEP--DLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
G V Y +I LCK + A + +M G P+ V YN ++ GL + G
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
T+ L++A V + +A+E +YN+
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE---------------LYNV- 283
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
M++ DV T ++ING C G +DEA ++ M
Sbjct: 284 -------------------MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG- 323
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C P+ V +TT+I G + RV++ +F+ M + G+ +TY LI+G + RP+ A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYE-MSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILK 542
V++ M S D TY ++++GLC ++E+A + + + + N V Y I++
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF-EYMRKREMDINIVTYTIIIQ 441
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G+C+ G +A L G+ PN+ +Y +I+ C L EA + ++MK++G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 603 D 603
+
Sbjct: 502 N 502
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 4/233 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M++ D++T +++NG+C +++A+ L D ++G P+VV++TT+I L
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAI-ALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
++ A +LF++ M NG RP VVTYNAL+ GL ++ R DA + M+ I + T+
Sbjct: 203 HLNHAVELFNQ-MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
T +++ ++ EAK ++ +I S D F Y +++ GLC G +EA Y +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQG 615
+G PN Y LI+ C + +I EM + G+ + +T+ +L IQG
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL--IQG 372
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 4/305 (1%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY L+ LC ++ A E+ M YN + M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
++ + +VIT +I+ F K G + EA K L ++++ PDV ++ ++I+GL
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEA-KELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+DEA +F+ +M NG P V Y LI G K KR D ++ M G+ A++ TYT
Sbjct: 309 LDEARQMFY-LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
++++G C + + A+ ++ + D Y +L GLC +G +A +
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLS 623
+ NI +Y I+I C L +A+ + + G+ P+ +T+ + I G R+ +
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM--ISGFCRRGLIH 485
Query: 624 EYQSL 628
E SL
Sbjct: 486 EADSL 490
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 145/382 (37%), Gaps = 77/382 (20%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ T + LC + + A + F+ +GS P+
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN--------------------------- 222
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V Y+ L+ C R DA + DM R PNV+++T LI+ + VG
Sbjct: 223 ----------VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ +A+++++ M++ V P+ TY LI G+ L+ R+ M L ER +
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ-MFYLMERNGCYPNEVI- 330
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L+ C+ + +I E+ +G +A + Y +I C VGR A +
Sbjct: 331 ---YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M R P YN ++ GL +G + TY ++++ +C +
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
V+ A ++ S+ + +VIT
Sbjct: 448 KVEDAFDLF-----------------------------------CSLFSKGMKPNVITYT 472
Query: 397 TVINGFCKTGSVDEALKVLQDM 418
T+I+GFC+ G + EA + + M
Sbjct: 473 TMISGFCRRGLIHEADSLFKKM 494
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 236/555 (42%), Gaps = 23/555 (4%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHR 112
EA FS S+ VP C VLL LLR W + + ++ + V + YH
Sbjct: 169 EAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV--ERNVVFDVKTYHM 226
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
L+ C + F + T +N + A K+ + M+ G
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFR-------TATLN-------VDGALKLKESMICKG 272
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
+ P TY VLI G+ + + LE + L+ ++ + + V +++ ++ L+D L +
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDN----HTYSLLIDGLLKGRN 327
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
+ + E+ G + +Y I + K G A + M G +P Y
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKE 352
+I G ++ + +GY+ +TY +V+ +C D+D A ++K M+
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 353 GVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEAL 412
IY ++ M E D+ N++I G K +DEA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 413 KVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIR 472
L +M+ P+ ++ ISG ++A+ A D + + M E G+ P V LI
Sbjct: 508 SFLVEMVENGL-KPNAFTYGAFISGYIEASEFASA-DKYVKEMRECGVLPNKVLCTGLIN 565
Query: 473 GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH 532
K + +A Y SMV GI D+ TYT+++ GL D++++A+ + ++
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 533 DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
D F Y ++ G + GN +A E+V+ G++PN+ YN+L+ C +A +++
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 593 REMKKNGLNPDCVTW 607
EM GL+P+ VT+
Sbjct: 686 DEMSVKGLHPNAVTY 700
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/631 (20%), Positives = 248/631 (39%), Gaps = 49/631 (7%)
Query: 19 SLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLA 78
+L+ ++ L+++ + LC R +A + G D+ T ++L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 79 RLLRSRTPLQTWALVRSL----IVAKP-----------------------------GFVP 105
LL+ R LV + I KP G +P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
Y L++ +C + + + +MK R + +Y T++ G CS G + A +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANL 223
EM+ SG PN + Y+ LI+ LQ ++ ++ E+ G+ + + +L
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-------GIAPDIFCYNSL 493
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+ L + +E E+ G YG I + + A + V EM++ G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
+P+ VL +I+ K G + TY VL+ L VD A E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
+ + M K Y + + M+E +VI N ++ GFC
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
++G +++A ++L +M + K P+ V++ T+I G + + EAF LF M GL P
Sbjct: 674 RSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE-MKLKGLVPD 731
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
Y L+ G +L A ++ + G + + + ++ + + E +
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 524 DVIWPS----GIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
++ S G ++ Y ++ LC+ GN A +++ ++ + P + +Y L+N
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ ++E + + E G+ PD + + ++
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/559 (23%), Positives = 232/559 (41%), Gaps = 19/559 (3%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHR 112
+A F +ASG +P + L+ R + Q + L+ + K V S Y
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM--KKRNIVISPYTYGT 422
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
++ C A+ I +M G PNVV YTTLI + GDA +V EM E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF--ANLVDSLCRE 230
+ P+ Y+ LI G+ + + ++ R + ++ VE+G+K AF +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-------VENGLKPNAFTYGAFISGYIEA 535
Query: 231 GFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
F + +E+ G L +V+ +I+ CK G+ A M +G + Y
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 291 NYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLR 350
+++GL K+ + +Y VL+ + ++ KA + M+
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 351 KEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDE 410
+ IYN+ L M + +T T+I+G+CK+G + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
A ++ +M + K PD +TT++ G V+ A +F + G +NAL
Sbjct: 716 AFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAPFNAL 772
Query: 471 IRGLYKLKRPNDAFGVYSSMVS---DGIGA-DSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
I ++K + V + ++ D G + TY I+++ LC +E AK +H +
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
+ + Y ++L G + G E E + +G+ P+ Y+++IN + +
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 587 EAYQIVREM-KKNGLNPDC 604
+A +V +M KN ++ C
Sbjct: 893 KALVLVDQMFAKNAVDDGC 911
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/508 (20%), Positives = 189/508 (37%), Gaps = 81/508 (15%)
Query: 47 DSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPS 106
+++ F+ A + G +P+ C L+ + ++ + RS++ G +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV--DQGILGD 591
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
Y LM+ + DA IF +M+ +G P+V SY LING+ +G + A +FD
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
EM+E G+ PN + Y++L+ G
Sbjct: 652 EMVEEGLTPNVIIYNMLLGG---------------------------------------- 671
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
CR G + + +E+ +G V Y +ID CK G A R+ EMK +G VP
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
+Y ++ G + D R C + + VF K
Sbjct: 732 SFVYTTLVDGCCRLNDVERA----ITIFGTNKKGCASSTAPFNALINWVFKFGKTEL--- 784
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
KT + N + + + + +T N +I+ CK G
Sbjct: 785 ---------KTEVLNRLMDGS----------------FDRFGKPNDVTYNIMIDYLCKEG 819
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
+++ A ++ M P V+++T++++G R E F +F + G+ P +
Sbjct: 820 NLEAAKELFHQMQNANL-MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIM 877
Query: 467 YNALIRGLYKLKRPNDAFGVYSSM-----VSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
Y+ +I K A + M V DG +T ++ G ++E A+
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGN 549
+++ I D+ ++ C S N
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSN 965
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 216/514 (42%), Gaps = 80/514 (15%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L ++ ++P PS+V+++RL+ ++ + M+ G ++ ++ +IN
Sbjct: 72 LFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+C + A + +ML+ G EP+ +T
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVT-------------------------------- 157
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+LV+ CR ++ + +++ G + V Y +IDSLCK R + A
Sbjct: 158 --------IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
E++++G P+ V TY LV
Sbjct: 210 FDFFKEIERKGIRPNVV-----------------------------------TYTALVNG 234
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
LC+ A +L M++K+ Y+ L A M+ D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
++T +++ING C +DEA ++ D+++ K C DVVS+ T+I+G A RV++ LF
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M + GL VTYN LI+G ++ + A +S M GI D TY I++ GLCD
Sbjct: 354 -REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++E+A + D+ D Y +++G+C++G EA L G+ P+I +
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGL-NPDC 604
Y +++ C L E + +MK+ GL DC
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 192/413 (46%), Gaps = 53/413 (12%)
Query: 57 CFSISLAS---------GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSL 107
CF +SLA G PD T L+ R +LV ++ + G+ P +
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV--EIGYKPDI 190
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
V Y+ ++D C +R DA F +++ +G PNVV+YT L+NG C+ DA ++ +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M++ + PN +TYS L+ ++ + +EL ++ RMS++ + + +++L++ L
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPD----IVTYSSLINGL 305
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
C +E ++ + + +G LA+ V Y +I+ CK R ++ EM +RG V +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
V YN +I G + GD + + TY +L+ LC +++KA + +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M ++E D++T TVI G CKTG
Sbjct: 426 MQKRE-----------------------------------MDLDIVTYTTVIRGMCKTGK 450
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
V+EA + + + K PD+V++TT++SGL + E L+ + M + GL
Sbjct: 451 VEEAWSLFCSLSL-KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK-MKQEGL 501
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 131/576 (22%), Positives = 236/576 (40%), Gaps = 96/576 (16%)
Query: 50 RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL--IVAKPGFVPSL 107
+ ++A FS + S P N RLL + L+ + +V SL + G L
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFN----RLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
++ +++ FC + A I M G+ P+ V+ +L+NG+C + DA + D+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M+E G +P+ + A+ ++DSL
Sbjct: 181 MVEIGYKPD----------------------------------------IVAYNAIIDSL 200
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
C+ N+ F +E+ +G V Y +++ LC R+ AAR++ +M K+ P+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
+ Y+ ++ K+G + + TY L+ LC +D+A ++ L
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M+ K C ADV++ NT+INGFCK
Sbjct: 321 MVSK-----------------------------------GCLADVVSYNTLINGFCKAKR 345
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
V++ +K+ ++M + + V++ T+I G A VD+A + F + M G+ P + TY
Sbjct: 346 VEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ-MDFFGISPDIWTY 403
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
N L+ GL A ++ M + D TYT ++ G+C ++EEA S + +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 528 PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSE 587
D Y ++ GLC G +E ++ G+ N +C +
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITL 515
Query: 588 AYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLS 623
+ +++++M G P +L I+ V K+ LS
Sbjct: 516 SAELIKKMLSCGYAPS-----LLKDIKSGVCKKALS 546
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 205/473 (43%), Gaps = 48/473 (10%)
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK- 216
+ DA +F +M++S P+ + ++ L+ +++ + + ++ L ++M V G++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD----VVISLGKKMEV---LGIRN 118
Query: 217 -VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ F +++ C + I ++ G + V G +++ C+ R A +V
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
+M + G+ P V YN II L K + TY LV LC+
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
A +L M++K + +VIT
Sbjct: 239 SRWSDAARLLSDMIKK-----------------------------------KITPNVITY 263
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+ +++ F K G V EA ++ ++M+ PD+V+++++I+GL R+DEA +F +M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFD-LM 321
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
G VV+YN LI G K KR D ++ M G+ +++ TY +++G +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
++A+ F+ + + D + Y +L GLC +G +A ++ + +I +Y +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
I C EA+ + + GL PD VT+ + + G K L E ++L
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM--MSGLCTKGLLHEVEAL 492
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 7/260 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
++ LC+S+R+S+A + S + P+ T + LL +++ L+ L ++ +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV--RM 289
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P +V Y L++ C+ R +A+++F M ++G +VVSY TLING+C + D
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K+F EM + G+ N++TY+ LI+G Q D++ +E ++ + + + + +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPD----IWTYN 404
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ LC G + I E++ + + V Y +I +CK G+ A + + +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 282 GFVPSDVLYNYIIHGLTKDG 301
G P V Y ++ GL G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/607 (22%), Positives = 245/607 (40%), Gaps = 47/607 (7%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ ++ ++ LC + E P+H T L+ L ++ AL +
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V G LV Y LMD +A + F + PNVV+YT L++G C G
Sbjct: 321 VVR--GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A + +MLE V PN +TYS +I G +++ LE L+ K+ E +V V +G
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNV-VPNGF- 435
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ ++D L + G +++E+ G + +++ L ++GR +V
Sbjct: 436 --TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M +G + Y +I K GD +Y VL+ +
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553
Query: 337 DVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
V A K M R++G++ +NI + + M + +++
Sbjct: 554 KVG-ADWAYKGM-REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSC 611
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV- 454
N V+ C+ G ++EA+ +L M++ + P++ ++ + R D F +
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEI-HPNLTTYRIFLDTSSKHKRADAIFKTHETLL 670
Query: 455 ---------------------------------MPENGLRPCVVTYNALIRGLYKLKRPN 481
M G P VT+N+L+ G +
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAI 540
A YS M+ GI + TY I+ GL D I+E W + G+ D+F Y A+
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK-WLSEMKSRGMRPDDFTYNAL 789
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ G + GN + E++ G+ P +YN+LI+ ++ +A ++++EM K G+
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 601 NPDCVTW 607
+P+ T+
Sbjct: 850 SPNTSTY 856
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/643 (20%), Positives = 252/643 (39%), Gaps = 77/643 (11%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALV------ 93
T + LC+ EA+Q S + G +PD + N L+ + ++ ALV
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Query: 94 ----------------------RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
R ++++ GF P +V + ++++ C + + +
Sbjct: 226 NLITHTILLSSYYNLHAIEEAYRDMVMS--GFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
+M+ PN V+YTTL++ A ++ +M+ G+ + + Y+VL+ G+ +
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
DL + L E V V + LVD LC+ G + I ++ + +
Sbjct: 344 DLREAEKTFKMLLEDNQVP-----NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y MI+ K G A ++ +M+ + VP+ Y +I GL K G +
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK----EGVDKTRIYNIYLRAX 367
++ LV L + + + + ++K M+ K + ++ T + +++ +
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG- 517
Query: 368 XXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV------------------- 408
M E DV++ N +I+G K G V
Sbjct: 518 ---GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIA 574
Query: 409 --------------DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
E + L D + P ++S V+ L + +++EA + +++
Sbjct: 575 TFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M + P + TY + K KR + F + +++S GI Y ++ LC
Sbjct: 635 MLME-IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
++A D+ I D + +++ G + +A ++++G+SPN+ +YN
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKV 617
+I L E + + EMK G+ PD T+ L Q K+
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 152/650 (23%), Positives = 247/650 (38%), Gaps = 106/650 (16%)
Query: 58 FSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQF 117
+S +A G PD NVL+ + +L+R+ +++ V Y+ ++
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS-----IDTVTYNTVISGL 171
Query: 118 CVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNS 177
C +A++ +M G P+ VSY TLI+G+C VG A+ + DE+ E N
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNL 227
Query: 178 LTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNE 235
+T+++L+ +E M V SG V F+++++ LC+ G E
Sbjct: 228 ITHTILLSSYYNLHAIEEAYRDM----------VMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD-VLYNYII 294
+ E+ V Y ++DSL K Y A + +M RG +P D V+Y ++
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG-IPVDLVVYTVLM 336
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
GL K GD + TY LV+ LC D+ A ++ ML K +
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 355 DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
Y+ + M + + T TVI+G K G + A+++
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 415 LQDM-LMG------------------------KFCAPDVVSFTTVISGLLDATRVDEAFD 449
++M L+G K D+VS LD D
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT----LDQINYTSLID 512
Query: 450 LFHR------------VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGA 497
+F + M E G+ VV+YN LI G+ K + + Y M GI
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEP 571
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG-LCRSGNFNEACHF 556
D T+ I++ E W D + GI + + I+ G LC +G EA H
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLW-DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 557 LYELVDSGVSPNIFS-----------------------------------YNILINCACH 581
L +++ + PN+ + YN LI C
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL---HKIQGKVRKQTLSEYQSL 628
L + +A ++ +M+ G PD VT+ L + + VRK LS Y +
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK-ALSTYSVM 739
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 34/370 (9%)
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTY 325
R +GAAR + M G VP L+N +IH +G D
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
VL+ + C V + A +L+ R +D T YN + M++
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRN--RVISID-TVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 386 SQCRADVITLNTVINGFCKTGS-------VDEALKV---------------------LQD 417
D ++ NT+I+GFCK G+ VDE ++ +D
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
M+M F PDVV+F+++I+ L +V E L R M E + P VTY L+ L+K
Sbjct: 250 MVMSGF-DPDVVTFSSIINRLCKGGKVLEG-GLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 478 KRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY 537
A +YS MV GI D YT++++GL + EA+ + ++ + + + Y
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 538 AAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
A++ GLC++G+ + A + ++++ V PN+ +Y+ +IN + EA ++R+M+
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 598 NGLNPDCVTW 607
+ P+ T+
Sbjct: 428 QNVVPNGFTY 437
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF+P V ++ LM + V A + M G PNV +Y T+I G G I +
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAA 219
K EM G+ P+ TY+ LI G + +++G + C++ + G+ K +
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM-------IADGLVPKTST 820
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV-----------GRY 268
+ L+ G + + +E+ +G Y MI LCK+ Y
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMY 880
Query: 269 HGAAR-IVYEM-KKRGFVPSDVLYNYIIHGLTKDG 301
A+ ++ EM +++G++P + +I +K G
Sbjct: 881 LAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPG 915
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 120/303 (39%), Gaps = 23/303 (7%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G P +CN+++ L + + ++ +++ + P+L Y +D +R
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME--IHPNLTTYRIFLDTSSKHKRAD 660
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+ + + G + Y TLI C +G A V +M G P+++T++ L+
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEE 242
G + K SV +E+G+ VA + ++ L G EV + E
Sbjct: 721 HGYFVGSHVR-------KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ +G ++ Y +I K+G G+ I EM G VP YN +I G
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF---DVD---------KAREVLKLMLR 350
++ + TY ++ LC + DV+ +A+ +LK M+
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE 893
Query: 351 KEG 353
++G
Sbjct: 894 EKG 896
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 24/512 (4%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
PS+V+++ +M +C A F + G P+V S+ LING C VG I +A ++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFAN 222
+M + GVEP+S+TY++L +G + G WE + ++ G+ V +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGA-------WEVIRDMLDKGLSPDVITYTI 332
Query: 223 LVDSLCREGFFNEVFRIAEELPCQG-SLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ C+ G + + +++ +G L + M+ LCK GR A + +MK
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G P V Y+ +IHGL K G T+ L+ LC + +A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
R +L ++ +YNI + ++E+ V T N++I G
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+CKT ++ EA K+L D++ AP VVS+TT++ + ++ D R M G+
Sbjct: 513 YCKTQNIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNT-KSIDELRREMKAEGIP 570
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSS------------MVSDGIGADSTTYTIIVEGL 509
P VTY+ + +GL + + + V M S+GI D TY I++ L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
C + A F + + + Y ++ LC G +A F+Y L + VS +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLN 601
F+Y LI C A ++ ++ G N
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 168/360 (46%), Gaps = 3/360 (0%)
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
E Y ++D LC+ + A + + + PS V +N I+ G K G
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXX 370
+++ +L+ LC V + +A E+ M K GV+ + YNI +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGFHLL 305
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
ML+ DVIT ++ G C+ G++D L +L+DML F ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ ++SGL R+DEA LF++ M +GL P +V Y+ +I GL KL + + A +Y M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQ-MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
I +S T+ ++ GLC + EA+S +I D +Y ++ G +SG
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
EA ++++G++P++ ++N LI C +EA +I+ +K GL P V++ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 221/512 (43%), Gaps = 24/512 (4%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
PS+V+++ +M +C A F + G P+V S+ LING C VG I +A ++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFAN 222
+M + GVEP+S+TY++L +G + G WE + ++ G+ V +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGA-------WEVIRDMLDKGLSPDVITYTI 332
Query: 223 LVDSLCREGFFNEVFRIAEELPCQG-SLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ C+ G + + +++ +G L + M+ LCK GR A + +MK
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G P V Y+ +IHGL K G T+ L+ LC + +A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
R +L ++ +YNI + ++E+ V T N++I G
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+CKT ++ EA K+L D++ AP VVS+TT++ + ++ D R M G+
Sbjct: 513 YCKTQNIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNT-KSIDELRREMKAEGIP 570
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSS------------MVSDGIGADSTTYTIIVEGL 509
P VTY+ + +GL + + + V M S+GI D TY I++ L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
C + A F + + + Y ++ LC G +A F+Y L + VS +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLN 601
F+Y LI C A ++ ++ G N
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 168/360 (46%), Gaps = 3/360 (0%)
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
E Y ++D LC+ + A + + + PS V +N I+ G K G
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXX 370
+++ +L+ LC V + +A E+ M K GV+ + YNI +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGFHLL 305
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
ML+ DVIT ++ G C+ G++D L +L+DML F ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ ++SGL R+DEA LF++ M +GL P +V Y+ +I GL KL + + A +Y M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQ-MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
I +S T+ ++ GLC + EA+S +I D +Y ++ G +SG
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
EA ++++G++P++ ++N LI C +EA +I+ +K GL P V++ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 221/512 (43%), Gaps = 43/512 (8%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GFV +++Y +++ C A + G + T+L+ G+C + DA
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 162 RKVFDEM-LESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
KVFD M E PNS++YS+LI G+ + LE L ++ E+ +
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-----GCQPSTRTY 304
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
L+ +LC G ++ F + +E+ +G Y +ID LC+ G+ A + +M K
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
PS + YN +I+G KDG + ++ T+ L+E LC V K
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
A +LK ML++ D+++ N +I+
Sbjct: 425 AVHLLK-----------------------------------RMLDNGLSPDIVSYNVLID 449
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
G C+ G ++ A K+L M PD ++FT +I+ + D A F +M G+
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDI-EPDCLTFTAIINAFCKQGKADVA-SAFLGLMLRKGI 507
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
VT LI G+ K+ + DA + ++V I + +I++ L +++E +
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 521 FWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
+ + Y ++ GL RSG+ + L + SG PN++ Y I+IN C
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 581 HLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
EA +++ M+ +G++P+ VT+ ++ K
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 232/544 (42%), Gaps = 55/544 (10%)
Query: 40 TTLHALCDSNRFSEAHQCF-SISLASGSVPD-HRTCNVLLA--RLLRSRTPLQTWALVRS 95
T ++ALC N ++EA + F S L G V D H ++LL R L R L+ + ++
Sbjct: 200 TIVNALC-KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSK 258
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+ P+ V+Y L+ C R +A + M +G P+ +YT LI C
Sbjct: 259 EVTC----APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G I A +FDEM+ G +PN TY+VLI G+ ++ +E + R V+
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC-----RKMVKDRIFP 369
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
V + L++ C++G F + + + + ++++ LC+VG+ + A ++
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
M G P V YN +I GL ++G Y+ T+ ++ A C
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
D A L LMLRK G+ D +T
Sbjct: 490 GKADVASAFLGLMLRK-GIS----------------------------------LDEVTG 514
Query: 396 NTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
T+I+G CK G +AL +L+ ++ M P S ++ L +V E + ++
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPH--SLNVILDMLSKGCKVKEELAMLGKI 572
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
+ GL P VVTY L+ GL + +F + M G + YTII+ GLC +
Sbjct: 573 -NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 515 IEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+EEA+ + SG+ N V Y ++KG +G + A + +V+ G N Y+
Sbjct: 632 VEEAEKLL-SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 574 ILIN 577
L+
Sbjct: 691 SLLQ 694
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 221/540 (40%), Gaps = 28/540 (5%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ ALCD +A F + G P+ T VL+ L R + + R ++ K
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV--KD 365
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
PS++ Y+ L++ +C R A + M+ R PNV ++ L+ G C VG A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ ML++G+ P+ ++Y+VLI G+ +E + +L+ + ++E F
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN---CFDIEP--DCLTFT 480
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++++ C++G + + +G +EV +ID +CKVG+ A I+ + K
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
+ + N I+ L+K TY LV+ L D+ +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+L+LM + Y I + +M +S + +T ++ G
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL------LDATRVDEAFDLFHRVM 455
+ G +D AL+ ++ M+ + D + +++++ G +D + D+ R
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRI-YSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Query: 456 -PE--NGLRPCVVTYNALIRG--------LYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
PE N L V I G L K R +++ + +++ G+ + I
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DI 778
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDS 563
I+E C + + ++ SG +F + +++GL + G+ A + EL+ S
Sbjct: 779 IMESYCSKKKHTKCMELI-TLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTS 837
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
PC Y++L+ L KL A+ Y M +DG Y IV LC E A+ F
Sbjct: 161 PC---YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS--PNIFSYNILINCA 579
++ + D+ + ++L G CR N +A +++++ V+ PN SY+ILI+
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALK-VFDVMSKEVTCAPNSVSYSILIHGL 276
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
C + EA+ + +M + G P T+ +L K
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 203/455 (44%), Gaps = 18/455 (3%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLES--GVEPNSLTYSVLIRGVLQERDLEGGR 197
P+V + + ++N YC G + D VF + ES G+E N +TY+ LI G D+EG
Sbjct: 223 PDVFTCSIVVNAYCRSGNV-DKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEG-- 279
Query: 198 ELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVY 255
M ++ MS E GV V + +L+ C++G E + E L + +A++ +Y
Sbjct: 280 --MTRVLRLMS---ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 256 GQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXX 315
G ++D C+ G+ A R+ M + G + + N +I+G K G + Q
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 316 XXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXX 375
HTY LV+ C VD+A ++ M +KE V YNI L+
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI 435
ML+ AD I+ +T++ K G +EA+K+ +++L + D ++ +I
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL-ARGLLTDTITLNVMI 513
Query: 436 SGLLDATRVDEAFDLFHRVMPENGLR--PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
SGL +V+EA ++ V N R P V TY AL G YK+ +AF V M
Sbjct: 514 SGLCKMEKVNEAKEILDNV---NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
GI Y ++ G + + ++ Y A++ G C G ++A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+E+++ G++ N+ + + N LD EA
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/570 (22%), Positives = 239/570 (41%), Gaps = 21/570 (3%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+ + C EA F + V D VL+ R+ + ++I
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI- 358
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G + + L++ +C + +A +IF M + P+ +Y TL++GYC G +
Sbjct: 359 -EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
+A K+ D+M + V P +TY++L++G + G + LW+ M ++ GV
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRI----GAFHDVLSLWKMM---LKRGVNAD 470
Query: 219 AFA--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L+++L + G FNE ++ E + +G L + + MI LCK+ + + A I+
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+ P+ Y + HG K G+ + Y L+
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 337 DVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
++K +++ + LR G+ T Y + M+E +V
Sbjct: 591 HLNKVADLV-IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG----LLDATRVDEAFDLF 451
+ + N + +DEA +LQ ++ P S + L ++ E+ +
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE-- 707
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS-DGIGADSTTYTIIVEGLC 510
P+ L P + YN I GL K + DA ++S ++S D D TYTI++ G
Sbjct: 708 -NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
I +A + ++ I + Y A++KGLC+ GN + A L++L G++PN
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGL 600
+YN LI+ +EA ++ +M + GL
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 225/522 (43%), Gaps = 11/522 (2%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y LMD +C + DA R+ +M G N +LINGYC G + +A ++F M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
+ ++P+ TY+ L+ G + ++ +L ++ ++ V V + L+ R
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT-----VMTYNILLKGYSR 448
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
G F++V + + + +G A+E+ ++++L K+G ++ A ++ + RG + +
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
N +I GL K + TY+ L V ++ +A V + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
RK +YN + + V T +I G+C G +D
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
+A +M+ K +V + + + L ++DEA L +++ + L P +
Sbjct: 629 KAYATCFEMI-EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKE 687
Query: 470 LIRGLYK--LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
+ LK A V +S + ++ Y + + GLC ++E+A+ + D++
Sbjct: 688 FLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLS 747
Query: 528 PSG-IHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
I D + Y ++ G +G+ N+A E+ G+ PNI +YN LI C L
Sbjct: 748 SDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 587 EAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
A +++ ++ + G+ P+ +T+ L I G V+ ++E L
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTL--IDGLVKSGNVAEAMRL 847
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 203/494 (41%), Gaps = 45/494 (9%)
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
+ ++ Y G + +A VFD M G P+ L+ + L+ ++++ G + ++
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK----GENFVALHVY 213
Query: 205 ERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV-YGQMIDSLC 263
++M + E V + +V++ CR G ++ A+E L VV Y +I+
Sbjct: 214 DQM-ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
+G G R++ M +RG + V Y +I G K G H
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
Y VL++ C + D R+++ +M
Sbjct: 333 MYGVLMDGYCRTGQIR---------------DAVRVHD--------------------NM 357
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+E R + N++ING+CK+G + EA ++ M PD ++ T++ G A
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL-KPDHHTYNTLVDGYCRAGY 416
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
VDEA L + M + + P V+TYN L++G ++ +D ++ M+ G+ AD + +
Sbjct: 417 VDEALKLCDQ-MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
++E L EA W +V+ + D ++ GLC+ NEA L +
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIF 535
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLS 623
P + +Y L + + EA+ + M++ G+ P + L I G + + L+
Sbjct: 536 RCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL--ISGAFKYRHLN 593
Query: 624 EYQSLSINYEGQDM 637
+ L I + +
Sbjct: 594 KVADLVIELRARGL 607
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESG-VEPNSLTYSVLIRGVLQERDLEGGRE 198
PN + Y I G C G + DARK+F ++L S P+ TY++LI G D+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA-- 774
Query: 199 LMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
L + M+++ G+ + + L+ LC+ G + R+ +LP +G + Y
Sbjct: 775 --FTLRDEMALK---GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+ID L K G A R+ +M ++G V
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 203/473 (42%), Gaps = 14/473 (2%)
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
Y +IN Y + + F+EM+++G P S ++ L+ V+ W
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQ--------W 148
Query: 205 ERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL 262
E +S V V +F L+ C G + F + EL G V+Y +ID
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 263 CKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD 322
CK G A + +EM K G V ++ Y +I+GL K+G +G++
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXX 381
+TY ++ LC A +V M R+ GV YN +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M ++IT NT+I+GFC G + +AL + +D L + +P +V++ ++SG
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD-LKSRGLSPSLVTYNILVSGFCRK 386
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
A + + M E G++P VTY LI + A + SM G+ D T
Sbjct: 387 GDTSGAAKMV-KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y++++ G C Q+ EA + ++ + + +Y ++ G C+ G+ A L E+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQ 614
+ ++PN+ SY +I C EA ++V +M +G++P ++ + +
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAK 558
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 16/451 (3%)
Query: 58 FSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQF 117
F+ + +G VP N LL ++ S + Q W+ K V + ++ L+
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE---NKSKVVLDVYSFGILIKGC 173
Query: 118 CVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNS 177
C + + ++ G PNVV YTTLI+G C G I A+ +F EM + G+ N
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 178 LTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNE 235
TY+VLI G+ + + G E ++E+M E GV + + +++ LC++G +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFE----MYEKMQ---EDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
F++ +E+ +G V Y +I LC+ + + A ++V +MK G P+ + YN +I
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
G G + TY +LV C D A +++K M + G+
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIK 405
Query: 356 KTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+++ Y I + SM E DV T + +I+GFC G ++EA ++
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
+ M+ K C P+ V + T+I G A L + M E L P V +Y +I L
Sbjct: 466 FKSMV-EKNCEPNEVIYNTMILGYCKEGSSYRALKLL-KEMEEKELAPNVASYRYMIEVL 523
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
K ++ +A + M+ GI ++ ++I
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 169/424 (39%), Gaps = 79/424 (18%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
T + C +A F G V + RT VL+ L ++ Q + + +
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM-- 259
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G P+L Y+ +M+Q C R DA ++F +M+ RG N+V+Y TLI G C +
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
+A KV D+M G+ PN +TY+ LI
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLI---------------------------------- 345
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
D C G + + +L +G V Y ++ C+ G GAA++V EM
Sbjct: 346 ------DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
++RG PS V Y +I + + + Q HTY VL+ C +
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
++A + K SM+E C + + NT+
Sbjct: 460 NEASRLFK-----------------------------------SMVEKNCEPNEVIYNTM 484
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
I G+CK GS ALK+L++M K AP+V S+ +I L + EA L + M ++
Sbjct: 485 ILGYCKEGSSYRALKLLKEM-EEKELAPNVASYRYMIEVLCKERKSKEAERLVEK-MIDS 542
Query: 459 GLRP 462
G+ P
Sbjct: 543 GIDP 546
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 123/236 (52%), Gaps = 6/236 (2%)
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
+S+ DV + +I G C+ G ++++ +L ++ F +P+VV +TT+I G +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF-SPNVVIYTTLIDGCCKKGEI 214
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
++A DLF M + GL TY LI GL+K F +Y M DG+ + TY
Sbjct: 215 EKAKDLFFE-MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDS 563
++ LC + ++A + D + G+ N V Y ++ GLCR NEA + ++
Sbjct: 274 VMNQLCKDGRTKDAFQVF-DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
G++PN+ +YN LI+ C + +A + R++K GL+P VT+ IL + G RK
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL--VSGFCRK 386
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 6/367 (1%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
Y + SLCK G + A ++ MK G P++ L +++ + G +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH--FATALLL 162
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
C L+ L + V+ A ++ LR + + T+ +NI +R
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
M C D++T NT+I GFCK+ +++A ++ +D+ G C+PDVV++T+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+ISG A ++ EA L M G+ P VT+N L+ G K A + M+S
Sbjct: 283 MISGYCKAGKMREASSLLDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
G D T+T +++G C Q+ + W ++ + F Y+ ++ LC +A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL--- 610
L +L + P F YN +I+ C +EA IV EM+K PD +T+ IL
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 611 HKIQGKV 617
H ++G++
Sbjct: 462 HCMKGRM 468
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 179/426 (42%), Gaps = 22/426 (5%)
Query: 33 SLQHSIAT---TLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL-RSRTPLQ 88
+++HS T +LC + A Q F + G P++R L++ + +
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
T L++S V V + L++ R DA ++F + C + ++ L
Sbjct: 158 TALLLQSFEVEGCCMV-----VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
I G C VG A ++ M G EP+ +TY+ LI+G + +L E M
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE--------MF 264
Query: 209 VEVESGV----KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
+V+SG V + +++ C+ G E + +++ G V + ++D K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 265 VGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHT 324
G A I +M G P V + +I G + G +G++ T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
Y +L+ ALC+ + KARE+L + K+ + + +YN + M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
+ +C+ D IT +I G C G + EA+ + M+ C+PD ++ ++++S LL A
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAGMA 503
Query: 445 DEAFDL 450
EA+ L
Sbjct: 504 KEAYHL 509
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 185/429 (43%), Gaps = 15/429 (3%)
Query: 144 SYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
+Y L C G A ++F+ M GV PN+ L+ ++ L L+ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ- 163
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
S EVE V +L+++L + + ++ +E S + + +I LC
Sbjct: 164 ----SFEVEGCCMVVN--SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
VG+ A ++ M G P V YN +I G K + + + D
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 324 -TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXX 381
TY ++ C + +A +L MLR G+ T + +N+ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRL-GIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLD 440
M+ C DV+T ++I+G+C+ G V + ++ ++M G F P+ +++ +I+ L +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF--PNAFTYSILINALCN 394
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
R+ +A +L ++ ++ + P YN +I G K + N+A + M D
Sbjct: 395 ENRLLKARELLGQLASKD-IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
T+TI++ G C ++ EA S +H ++ D +++L L ++G EA H L ++
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQI 512
Query: 561 VDSGVSPNI 569
G S N+
Sbjct: 513 ARKGQSNNV 521
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 6/367 (1%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
Y + SLCK G + A ++ MK G P++ L +++ + G +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH--FATALLL 162
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
C L+ L + V+ A ++ LR + + T+ +NI +R
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
M C D++T NT+I GFCK+ +++A ++ +D+ G C+PDVV++T+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+ISG A ++ EA L M G+ P VT+N L+ G K A + M+S
Sbjct: 283 MISGYCKAGKMREASSLLDD-MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
G D T+T +++G C Q+ + W ++ + F Y+ ++ LC +A
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL--- 610
L +L + P F YN +I+ C +EA IV EM+K PD +T+ IL
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 611 HKIQGKV 617
H ++G++
Sbjct: 462 HCMKGRM 468
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 179/426 (42%), Gaps = 22/426 (5%)
Query: 33 SLQHSIAT---TLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL-RSRTPLQ 88
+++HS T +LC + A Q F + G P++R L++ + +
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
T L++S V V + L++ R DA ++F + C + ++ L
Sbjct: 158 TALLLQSFEVEGCCMV-----VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
I G C VG A ++ M G EP+ +TY+ LI+G + +L E M
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE--------MF 264
Query: 209 VEVESGV----KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
+V+SG V + +++ C+ G E + +++ G V + ++D K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 265 VGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHT 324
G A I +M G P V + +I G + G +G++ T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
Y +L+ ALC+ + KARE+L + K+ + + +YN + M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
+ +C+ D IT +I G C G + EA+ + M+ C+PD ++ ++++S LL A
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAGMA 503
Query: 445 DEAFDL 450
EA+ L
Sbjct: 504 KEAYHL 509
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 185/429 (43%), Gaps = 15/429 (3%)
Query: 144 SYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
+Y L C G A ++F+ M GV PN+ L+ ++ L L+ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ- 163
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
S EVE V +L+++L + + ++ +E S + + +I LC
Sbjct: 164 ----SFEVEGCCMVVN--SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
VG+ A ++ M G P V YN +I G K + + + D
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 324 -TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXX 381
TY ++ C + +A +L MLR G+ T + +N+ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRL-GIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLD 440
M+ C DV+T ++I+G+C+ G V + ++ ++M G F P+ +++ +I+ L +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF--PNAFTYSILINALCN 394
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
R+ +A +L ++ ++ + P YN +I G K + N+A + M D
Sbjct: 395 ENRLLKARELLGQLASKD-IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
T+TI++ G C ++ EA S +H ++ D +++L L ++G EA H L ++
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQI 512
Query: 561 VDSGVSPNI 569
G S N+
Sbjct: 513 ARKGQSNNV 521
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 206/475 (43%), Gaps = 21/475 (4%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+ + ++ Y G + AR+ F+ M G+ P S Y+ LI RD++
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 200 MCKLWE---RMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
+ K+ E MS+ V V V F+ + + +F+E RI + L +YG
Sbjct: 367 VRKMKEEGIEMSL-VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNAS-------IYG 418
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
++I + C+ A +V EM++ G +Y+ ++ G T D +G
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXX 375
TY L+ V + KA EV ++M ++EGV + Y++ +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI 435
M++ + DVI N +I+ FC G++D A++ +++M + P +F +I
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPII 596
Query: 436 SGLL---DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
G D R E FD+ R G P V T+N LI GL + ++ A + M
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRC----GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNE 552
G+ A+ TYT I++G +A ++ + D F Y A+LK C+SG
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
A E+ + N F YNILI+ EA ++++MKK G+ PD T+
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/524 (22%), Positives = 228/524 (43%), Gaps = 20/524 (3%)
Query: 113 LMDQFCVFRRPCDAHR---IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
LM +F + R D HR F M+ RG P YT+LI+ Y + +A +M
Sbjct: 314 LMVKF--YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
E G+E + +TYSV++ G + G W + + + + + ++ + C+
Sbjct: 372 EEGIEMSLVTYSVIVGGFSK-----AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
+ E+ +G A +Y M+D V + +K+ GF P+ V
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
Y +I+ TK G + + TY +++ + D A V + M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 350 RKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV 408
KEG+ I YN + A M + + R T +I+G+ K+G +
Sbjct: 547 -KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
+L+V DM+ C P V +F +I+GL++ ++++A ++ M G+ TY
Sbjct: 606 RRSLEVF-DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE-MTLAGVSANEHTYT 663
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
+++G + AF ++ + ++G+ D TY +++ C +++ A + ++
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+ ++FVY ++ G R G+ EA + ++ GV P+I +Y I+ + A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 589 YQIVREMKKNGLNPDCVTWRILHKIQGKVR----KQTLSEYQSL 628
Q + EM+ G+ P+ T+ L I+G R ++ LS Y+ +
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTL--IKGWARASLPEKALSCYEEM 825
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 197/483 (40%), Gaps = 30/483 (6%)
Query: 43 HALCDSNRFSEA---HQCFSISLASGSVPDH-RTCNVLLARLLRSRTPLQTWALVRSLIV 98
HA F EA H+ + S+ + H +TCN+ A ALVR +
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE-----------ALVREM-- 440
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+ G + YH +MD + + +F +K G P VV+Y LIN Y VG I
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK-- 216
A +V M E GV+ N TYS++I G ++ +D ++E M V+ G+K
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA----FAVFEDM---VKEGMKPD 553
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V + N++ + C G + + +E+ + +I K G + +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M++ G VP+ +N +I+GL + + + +HTY +++ V
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 337 DVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
D KA E L+ EG+D Y L+A M +
Sbjct: 674 DTGKAFEYF-TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVY 732
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
N +I+G+ + G V EA ++Q M + PD+ ++T+ IS A ++ A M
Sbjct: 733 NILIDGWARRGDVWEAADLIQQM-KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE-M 790
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
G++P + TY LI+G + P A Y M + GI D Y ++ L I
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 516 EEA 518
EA
Sbjct: 851 AEA 853
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 11/268 (4%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H S + + F + G VP T N L+ L+ R + ++ + +A
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-- 653
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G + Y ++M + A F ++N G ++ +Y L+ C G + A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
V EM + NS Y++LI G + D+ +L+ ++ + GVK +
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-------KKEGVKPDIHT 766
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ + + + + G N + EE+ G Y +I + A EMK
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
G P +Y+ ++ L Y
Sbjct: 827 AMGIKPDKAVYHCLLTSLLSRASIAEAY 854
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 206/439 (46%), Gaps = 10/439 (2%)
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANL 223
+F +M++S P+ + +S ++ + + ++ + L+ L+ M V G + ++ +
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD----LVISLFHHMEV-CGIGHDLYSYNIV 110
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
++ LCR F + ++ G + V +I+ C+ R A +V +M++ GF
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
P V+YN II G K G + TY LV LC A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
+++ M+ ++ V + + M DV T N++ING C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
G VDEA ++L D+++ K C PDVV++ T+I+G + RVDE LF R M + GL
Sbjct: 291 MHGRVDEAKQML-DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF-REMAQRGLVGD 348
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
+TYN +I+G ++ RP+ A ++S M S + TY+I++ GLC ++E+A +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 524 DVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLD 583
++ D Y ++ G+C+ GN +A L G+ P++ SY +I+ C
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 584 LKSEAYQIVREMKKNGLNP 602
++ + R+M+++GL P
Sbjct: 466 QWDKSDLLYRKMQEDGLLP 484
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 170/363 (46%), Gaps = 10/363 (2%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G+ P +V L++ FC R DA + M+ G P+VV Y T+I+G C +G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA ++FD M GV +++TY+ L+ G+ LM + R V V
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-----NVIT 246
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F ++D +EG F+E ++ EE+ + + Y +I+ LC GR A +++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+G +P V YN +I+G K G + TY +++ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A+E+ M + + R Y+I L +M +S+ D+ T N VI
Sbjct: 367 AAQEIFSRMDSRPNI---RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G CK G+V++A + + L K PDVVS+TT+ISG + D++ DL +R M E+G
Sbjct: 424 HGMCKIGNVEDAWDLFRS-LSCKGLKPDVVSYTTMISGFCRKRQWDKS-DLLYRKMQEDG 481
Query: 460 LRP 462
L P
Sbjct: 482 LLP 484
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 214/536 (39%), Gaps = 82/536 (15%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
P + T S E F + S +P + +L+++ +S+ +
Sbjct: 31 PFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVIS 90
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L + V G L +Y+ +++ C R A + M G+ P+VV+ ++LING
Sbjct: 91 LFHHMEVCGIGH--DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+C + DA + +M E G P+ + Y+ +I
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII--------------------------- 181
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
D C+ G N+ + + + G A+ V Y ++ LC GR+ A
Sbjct: 182 -------------DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
AR++ +M R VP+ + + +I K+G + TY L+
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
LC VD+A+++L LM+ K C D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTK-----------------------------------GCLPD 313
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V+T NT+INGFCK+ VDE K+ ++M D +++ T+I G A R D A ++F
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG-DTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R+ RP + TY+ L+ GL R A ++ +M I D TTY I++ G+C
Sbjct: 373 SRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
+E+A + + D Y ++ G CR ++++ ++ + G+ P
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 4/238 (1%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ + N VIN C+ AL V+ M+ + PDVV+ +++I+G RV +A DL
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY-EPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+ M E G RP VV YN +I G K+ NDA ++ M DG+ AD+ TY +V GLC
Sbjct: 162 VSK-MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ +A D++ + + + A++ + G F+EA E+ V P++F
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+YN LIN C EA Q++ M G PD VT+ L I G + + + E L
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL--INGFCKSKRVDEGTKL 336
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 4/233 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M++ DV+T++++INGFC+ V +A+ ++ M F PDVV + T+I G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGSCKIG 188
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
V++A +LF R M +G+R VTYN+L+ GL R +DA + MV I + T+
Sbjct: 189 LVNDAVELFDR-MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
T +++ + EA + ++ D F Y +++ GLC G +EA L +V
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQG 615
G P++ +YN LIN C E ++ REM + GL D +T+ + IQG
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI--IQG 358
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 231/535 (43%), Gaps = 70/535 (13%)
Query: 68 PDHRTCNVLLARLLRSRTPLQ-TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDA 126
PD T NV+L ++R +A+ ++ K P+L + LMD R DA
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEML--KCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 127 HRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
++F DM RG PN V+YT LI+G C G DARK+F EM SG P+S+ ++ L+ G
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+ + EL+ +L+E+ + G++ +++L+D L R + + F + + +
Sbjct: 278 FCKLGRMVEAFELL-RLFEKDGFVL--GLR--GYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG--DCM 304
+ ++Y +I L K G+ A +++ M +G P YN +I L G +
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 305 RGYQXXXXXXXXXXXXCDHT---------------------------------YKVLVEA 331
R Q C HT + L++
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML------- 384
LC ++ +AR L+L K V R +++LR S+L
Sbjct: 453 LCKSGELKEAR----LLLHKMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA 506
Query: 385 ---ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
++ D+++ N +INGFC+ G +D ALK+L ++L K +PD V++ T+I+GL
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL-NVLQLKGLSPDSVTYNTLINGLHRV 565
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R +EAF LF+ ++ R Y +L+ + ++ AF ++ + D T
Sbjct: 566 GREEEAFKLFY---AKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDET 622
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV---YAAILKGLCRSGNFNEA 553
I + C + E + +I D Y L GLC+SG F+EA
Sbjct: 623 ANEIEQ----CFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA 673
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 208/492 (42%), Gaps = 46/492 (9%)
Query: 124 CDAH-RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
CD + + ++K+ G + + LI+ Y +G A + F M E P+ TY+V
Sbjct: 108 CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNV 167
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEE 242
++R +++E E L ++ M ++ + F L+D L ++G ++ ++ ++
Sbjct: 168 ILRVMMRE---EVFFMLAFAVYNEM-LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ +G V Y +I LC+ G A ++ YEM+ G P V +N
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN----------- 272
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
L++ C + + +A E+L+L + V R Y+
Sbjct: 273 ------------------------ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
+ +ML+ + D+I +I G K G +++ALK+L M K
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM-PSK 367
Query: 423 FCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
+PD + VI L ++E L M E P T+ LI + + +
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSL-QLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH--DVIWPSGIHDNFVYAA- 539
A +++ + G T+ +++GLC +++EA+ H +V P+ + ++
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 540 -ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
+ SG+ +A L D+G SP+I SYN+LIN C A +++ ++
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 599 GLNPDCVTWRIL 610
GL+PD VT+ L
Sbjct: 547 GLSPDSVTYNTL 558
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 192/511 (37%), Gaps = 76/511 (14%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC +A + F SG+ PD N LL + ++ + L+R + K
Sbjct: 240 ISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR--LFEKD 297
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GFV L Y L+D RR A ++ +M + P+++ YT LI G G I DA
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K+ M G+ P++ Y+ +I+ + LE GR L ++ E ES
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM-----SETESFPDACTHT 412
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK-- 279
L+ S+CR G E I E+ G + +ID LCK G A ++++M+
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Query: 280 --KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
F+ N + + G ++ Y+ +Y VL+ C D
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+D A ++L + L+ +G+ D +T NT
Sbjct: 533 IDGALKLLNV-LQLKGLS----------------------------------PDSVTYNT 557
Query: 398 VINGFCKTGSVDEALKVLQDM------------LMGKFCAPD--VVSFTTVISGL----- 438
+ING + G +EA K+ LM C +V+F + L
Sbjct: 558 LINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISC 617
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVV-----------TYNALIRGLYKLKRPNDAFGVY 487
LD +E F E LR + Y + GL + R ++A V+
Sbjct: 618 LDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVF 677
Query: 488 SSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
S + I + ++ GLC +Q++ A
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 3/322 (0%)
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
+ +I L++D C +Q + + VL+ A + +KA E M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS-MLESQCRADVITLNTVINGFCKTGSV 408
+ YN+ LR + ML+ C ++ T +++G K G
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
+A K+ DM G+ +P+ V++T +ISGL D+A LF+ M +G P V +N
Sbjct: 215 SDAQKMFDDM-TGRGISPNRVTYTILISGLCQRGSADDARKLFYE-MQTSGNYPDSVAHN 272
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
AL+ G KL R +AF + DG Y+ +++GL + +A + +++
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+ D +Y +++GL ++G +A L + G+SP+ + YN +I C L E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 589 YQIVREMKKNGLNPDCVTWRIL 610
+ EM + PD T IL
Sbjct: 393 RSLQLEMSETESFPDACTHTIL 414
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 7/220 (3%)
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLL-DATRVDEAFDLFHRVM 455
+I+ + K G ++A++ M +F C PDV ++ ++ ++ + AF +++ ++
Sbjct: 133 LISAYAKMGMAEKAVESFGRM--KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEML 190
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
N P + T+ L+ GLYK R +DA ++ M GI + TYTI++ GLC
Sbjct: 191 KCN-CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
++A+ ++++ D+ + A+L G C+ G EA L G + Y+ L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQG 615
I+ ++A+++ M K + PD + + IL IQG
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL--IQG 347
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDE-ALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M E CR DV T N ++ + A V +ML C+P++ +F ++ GL
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN-CSPNLYTFGILMDGLYKK 211
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R +A +F M G+ P VTY LI GL + +DA ++ M + G DS
Sbjct: 212 GRTSDAQKMFDD-MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-----YAAILKGLCRSGNFNEACHF 556
+ +++G C ++ EA D FV Y++++ GL R+ + +A
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFE-----KDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
++ + P+I Y ILI +A +++ M G++PD + + I+
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV--IKAL 383
Query: 617 VRKQTLSEYQSLSI 630
+ L E +SL +
Sbjct: 384 CGRGLLEEGRSLQL 397
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 202/476 (42%), Gaps = 42/476 (8%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
DA +FF+M + P++V +T L+ ++ +M G+ + ++++LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
+ L ++ K+ M + E + F +L+ C + F + +
Sbjct: 114 HCFCRCSRLSFALSVLGKM---MKLGYEP--SIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
G VVY +ID LCK G + A ++ EM+K+G V YN ++ GL G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ T+ L++ ++D+A+E+ K
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK------------------ 270
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M++S + +T N++ING C G + +A K D++ K C
Sbjct: 271 -----------------EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGC 312
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
P+VV++ T+ISG VDE LF R+ E G + TYN LI G ++ + A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
++ MVS + D T+ I++ GLC +IE A + D+ Y ++ GL
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
C++ +A L GV P+ +Y I+I C + EA +++R MK+ G+
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 189/432 (43%), Gaps = 13/432 (3%)
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
+AL ++ ++P +PS+V++ RL+ RR M+ G ++ S+T L
Sbjct: 55 AFALFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
I+ +C + A V +M++ G EP+ +T+ L+ G + L+ +
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM----- 167
Query: 209 VEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
V+SG + V + L+D LC+ G N + E+ +G A+ V Y ++ LC G
Sbjct: 168 --VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
R+ AAR++ +M KR P V + +I K G+ + + TY
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
++ LC + A++ LM K YN + M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
AD+ T NT+I+G+C+ G + AL + M+ + PD+++ ++ GL ++
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV-SRRVTPDIITHCILLHGLCVNGEIES 404
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A F M E+ +V YN +I GL K + A+ ++ + +G+ D+ TYTI++
Sbjct: 405 ALVKFDD-MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 507 EGLCDCDQIEEA 518
GLC EA
Sbjct: 464 LGLCKNGPRREA 475
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 170/397 (42%), Gaps = 44/397 (11%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G+ PS+V + L+ FC+ R DA + M G+ PNVV Y TLI+G C G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
A ++ +EM + G+ + +TY+ L+ G+ ++ + +R S+ + V
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPD----VVT 248
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F L+D ++G +E + +E+ V Y +I+ LC GR + A + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+G P+ V YN +I G K G + TY L+ C V +
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A ++ M+ + + D+IT ++
Sbjct: 369 VALDIFCWMVSR-----------------------------------RVTPDIITHCILL 393
Query: 400 NGFCKTGSVDEALKVLQDMLMG-KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+G C G ++ AL DM K+ +V++ +I GL A +V++A++LF R +P
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIG--IVAYNIMIHGLCKADKVEKAWELFCR-LPVE 450
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGI 495
G++P TY +I GL K +A + M +GI
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 168/394 (42%), Gaps = 2/394 (0%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ F L+ + + V ++++ G + + +I C+ R A ++
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M K G+ PS V + ++HG + Y L++ LC
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+++ A E+L M +K YN L M++ DV+T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I+ F K G++DEA ++ ++M+ P+ V++ ++I+GL R+ +A F +M
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSS-VDPNNVTYNSIINGLCMHGRLYDAKKTFD-LMA 308
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
G P VVTYN LI G K + ++ ++ M +G AD TY ++ G C ++
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
A + ++ D + +L GLC +G A ++ +S I +YNI+I
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ C D +A+++ + G+ PD T+ I+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 9/329 (2%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ + LH C NR +A + + SG P+ N L+ L ++ L+ +
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
K G +V Y+ L+ C R DA R+ DM R P+VV++T LI+ + G
Sbjct: 203 --EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ +A++++ EM++S V+PN++TY+ +I G+ L + K ++ M+ +
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK----KTFDLMASK-GCFPN 315
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V + L+ C+ +E ++ + + C+G A+ Y +I C+VG+ A I
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
M R P + + ++HGL +G+ Y +++ LC
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 337 DVDKAREVLKLMLRKEGVD-KTRIYNIYL 364
V+KA E+ L EGV R Y I +
Sbjct: 436 KVEKAWELF-CRLPVEGVKPDARTYTIMI 463
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T L LC S R+S+A + + PD T L+ ++ + L + +I
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI-- 273
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ P+ V Y+ +++ C+ R DA + F M ++G PNVV+Y TLI+G+C +
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER------------- 206
+ K+F M G + TY+ LI G Q L ++ C + R
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 207 ----MSVEVESG-------------VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
++ E+ES + + A+ ++ LC+ + + + LP +G
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+ Y MI LCK G A ++ MK+ G +
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 148/594 (24%), Positives = 245/594 (41%), Gaps = 104/594 (17%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLA-------SGSVPDHRTCNVLLARLLRSRTPLQ 88
+S+A + D+ S + S+SLA +GS PD R + L + + +
Sbjct: 91 YSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNIPL 150
Query: 89 TWALVRSLI--VAKPGFV-PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSY 145
T + LI + G V S++ Y RL D+ +MKN NVV
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERL-----------DS-----NMKN-SQVRNVVVD 193
Query: 146 TTLINGYCSVGGIGDARKVFDEML--ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
L NG + DA KV DEML ES PN +T +++ V +ER L E + L
Sbjct: 194 VLLRNGL-----VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL--TEEKIIAL 246
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
R S G V + I SLC
Sbjct: 247 ISRFS------------------------------------SHGVSPNSVWLTRFISSLC 270
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
K R + A I+ ++ K +N ++ L ++ D R
Sbjct: 271 KNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
T +L+ LC VD+A EV + M K D I
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI------------------------ 366
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+AD I NT+I+G CK G + EA ++L M + + C P+ V++ +I G A +
Sbjct: 367 -----KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
++ A ++ R M E+ ++P VVT N ++ G+ + N A + M +G+ + TY
Sbjct: 422 LETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVD 562
++ C +E+A +W++ + +G D +Y A++ GLC+ ++A + +L +
Sbjct: 481 TLIHACCSVSNVEKA-MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
G S ++ +YN+LI C + + Y+++ +M+K G PD +T+ L GK
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 204/483 (42%), Gaps = 17/483 (3%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G PN V T I+ C A + +++++ + ++ L+ + + D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS------LA 250
+L+ K+ EV+ V L+++LC+ +E + E++ + + A
Sbjct: 314 NDLVLKM-----DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMK-KRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ + + +ID LCKVGR A ++ MK + VP+ V YN +I G + G +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXX 368
T +V +C ++ A V + + KEGV + Y + A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
MLE+ C D +I+G C+ +A++V++ + G F + D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDL 546
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
+++ +I D ++ +++ M + G +P +TYN LI K K +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRS 547
M DG+ TTY +++ C +++EA + D+ S ++ N +Y ++ +
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
GNF +A E+ V PN+ +YN L C +++ EM + P+ +T
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 608 RIL 610
IL
Sbjct: 726 EIL 728
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 188/463 (40%), Gaps = 50/463 (10%)
Query: 68 PDHRTCNVLLARLLRSR---TPLQTWALVRSLIVAKPGFVPS-LVNYHRLMDQFCVFRRP 123
PD T +L+ L +SR L+ + +R + + ++++ L+D C R
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 124 CDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
+A + MK C PN V+Y LI+GYC G + A++V M E ++PN +T +
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIA 240
++ G+ + L M +E E GVK V + L+ + C +
Sbjct: 447 IVGGMCRHHGLNMAVVFF------MDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
E++ G + +Y +I LC+V R H A R+V ++K+ GF + YN +I
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
+ + Y+ TY L+ D + +++ M R++G+D T
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPT--- 615
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
V T VI+ +C G +DEALK+ +DM +
Sbjct: 616 -------------------------------VTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
P+ V + +I+ +A L M +RP V TYNAL + L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEE-MKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
+ MV + T I++E L D++ + + F
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 45 LCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFV 104
CD N + ++ + G PD T N L++ + + ++ + + G
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM--REDGLD 613
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARK 163
P++ Y ++D +C +A ++F DM PN V Y LIN + +G G A
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+ +EM V PN TY+ L + + ++ E +LM ++ E+
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 148/594 (24%), Positives = 245/594 (41%), Gaps = 104/594 (17%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLA-------SGSVPDHRTCNVLLARLLRSRTPLQ 88
+S+A + D+ S + S+SLA +GS PD R + L + + +
Sbjct: 91 YSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNIPL 150
Query: 89 TWALVRSLI--VAKPGFV-PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSY 145
T + LI + G V S++ Y RL D+ +MKN NVV
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERL-----------DS-----NMKN-SQVRNVVVD 193
Query: 146 TTLINGYCSVGGIGDARKVFDEML--ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
L NG + DA KV DEML ES PN +T +++ V +ER L E + L
Sbjct: 194 VLLRNGL-----VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL--TEEKIIAL 246
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
R S G V + I SLC
Sbjct: 247 ISRFS------------------------------------SHGVSPNSVWLTRFISSLC 270
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
K R + A I+ ++ K +N ++ L ++ D R
Sbjct: 271 KNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
T +L+ LC VD+A EV + M K D I
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI------------------------ 366
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+AD I NT+I+G CK G + EA ++L M + + C P+ V++ +I G A +
Sbjct: 367 -----KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
++ A ++ R M E+ ++P VVT N ++ G+ + N A + M +G+ + TY
Sbjct: 422 LETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVD 562
++ C +E+A +W++ + +G D +Y A++ GLC+ ++A + +L +
Sbjct: 481 TLIHACCSVSNVEKA-MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
G S ++ +YN+LI C + + Y+++ +M+K G PD +T+ L GK
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 203/481 (42%), Gaps = 17/481 (3%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G PN V T I+ C A + +++++ + ++ L+ + + D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS------LA 250
+L+ K+ EV+ V L+++LC+ +E + E++ + + A
Sbjct: 314 NDLVLKM-----DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMK-KRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ + + +ID LCKVGR A ++ MK + VP+ V YN +I G + G +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXX 368
T +V +C ++ A V + + KEGV + Y + A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
MLE+ C D +I+G C+ +A++V++ + G F + D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDL 546
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
+++ +I D ++ +++ M + G +P +TYN LI K K +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRS 547
M DG+ TTY +++ C +++EA + D+ S ++ N +Y ++ +
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
GNF +A E+ V PN+ +YN L C +++ EM ++ +N W
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIRSQW 725
Query: 608 R 608
R
Sbjct: 726 R 726
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 175/431 (40%), Gaps = 50/431 (11%)
Query: 68 PDHRTCNVLLARLLRSR---TPLQTWALVRSLIVAKPGFVPS-LVNYHRLMDQFCVFRRP 123
PD T +L+ L +SR L+ + +R + + ++++ L+D C R
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 124 CDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
+A + MK C PN V+Y LI+GYC G + A++V M E ++PN +T +
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIA 240
++ G+ + L M +E E GVK V + L+ + C +
Sbjct: 447 IVGGMCRHHGLNMAVVFF------MDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
E++ G + +Y +I LC+V R H A R+V ++K+ GF + YN +I
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
+ + Y+ TY L+ D + +++ M R++G+D T
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPT--- 615
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
V T VI+ +C G +DEALK+ +DM +
Sbjct: 616 -------------------------------VTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
P+ V + +I+ +A L M +RP V TYNAL + L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEE-MKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 481 NDAFGVYSSMV 491
+ MV
Sbjct: 704 ETLLKLMDEMV 714
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
Query: 45 LCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFV 104
CD N + ++ + G PD T N L++ + + ++ + + G
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM--REDGLD 613
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARK 163
P++ Y ++D +C +A ++F DM PN V Y LIN + +G G A
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
+ +EM V PN TY+ L + + ++ E +LM ++ E + ++ S
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIRS 723
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 214/486 (44%), Gaps = 40/486 (8%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ + G P+L+ + +D F R A R M+ G PNVV+Y +I GYC +
Sbjct: 267 LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLH 326
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK-------------- 202
+ +A ++ ++M G P+ ++Y ++ + +E+ + R+LM K
Sbjct: 327 RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTY 386
Query: 203 ----------------LWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELP 244
LW + E G ++ ++ +V +LC+EG +E + E+
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQ-EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 245 CQGSLAEEVV-YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+G +VV Y +++ C++G A +++ M G P+ V Y +++G+ + G
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
+ + TY V++ L + +A +V++ M+ K N+
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGK 422
L++ L C +V+ TVI+GFC+ +D AL VL DM L+ K
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 423 FCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
DV ++TT++ L R+ EA +L +++ G+ P VTY +I ++ + +D
Sbjct: 626 HA--DVFTYTTLVDTLGKKGRIAEATELMKKML-HKGIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
+ M+S T Y ++E LC ++EEA + V+ + D A+++
Sbjct: 683 LVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
Query: 543 GLCRSG 548
G + G
Sbjct: 741 GYLKKG 746
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/587 (22%), Positives = 228/587 (38%), Gaps = 98/587 (16%)
Query: 60 ISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPG------------FVPSL 107
I L S P H + LLRS P Q A++RS + +
Sbjct: 151 IGLRSSWNPKHEG---QMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDP 207
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ Y+ +++ + + R+ MK RG +++ ++ Y G + DA KV
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 168 MLESGVEPNSL----TYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANL 223
M +GVEPN L T V +R E+ L + ERM V V V + +
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKAL--------RFLERMQV-VGIVPNVVTYNCM 318
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM-KKRG 282
+ C E + E++ +G L ++V Y ++ LCK R ++ +M K+ G
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
VP V YN +IH LTK Y +V ALC + +A+
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 343 EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
+++ ML K C DV+T V+NGF
Sbjct: 439 DLINEMLSK----------------------------------GHCPPDVVTYTAVVNGF 464
Query: 403 CKTGSVDEALKVLQDM--------------LMGKFC--------------------APDV 428
C+ G VD+A K+LQ M L+ C +P+
Sbjct: 465 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
++++ ++ GL ++ EA D+ R M G P V N L++ L + R ++A
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVV-REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 583
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
++ G + +T ++ G C D+++ A S D+ + D F Y ++ L + G
Sbjct: 584 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG 643
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
EA + +++ G+ P +Y +I+ C + + I+ +M
Sbjct: 644 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+V+T N +I G+C V+EA+++L+DM K C PD VS+ T++ L R+ E DL
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDM-HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
++ E+GL P VTYN LI L K ++A G D Y+ IV LC
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 511 DCDQIEEAKSFWHDVIWPSGIH---DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
++ EAK ++++ S H D Y A++ G CR G ++A L + G P
Sbjct: 430 KEGRMSEAKDLINEML--SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
N SY L+N C EA +++ +++ +P+ +T+ ++ + G R+ LSE
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI--MHGLRREGKLSE 542
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 206/513 (40%), Gaps = 81/513 (15%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ CD +R EA + + G +PD + ++ L + + ++ L++ + +
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM-AKEH 377
Query: 102 GFVPSLVNYHRLMDQ-----------------------------------FCVFRRPCDA 126
G VP V Y+ L+ C R +A
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 127 HRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
+ +M ++GHC P+VV+YT ++NG+C +G + A+K+ M G +PN+++Y+ L+
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
G+ + RE+M MS E ++ ++ L REG +E + E+
Sbjct: 498 GMCRTGKSLEAREMM-----NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
+G V ++ SLC+ GR H A + + E +G + V + +IHG ++ +
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLR 365
TY LV+ L + +A E++K ML K G+D T
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK-GIDPT-------- 663
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA 425
+T TVI+ +C+ G VD+ + +L+ M+ + C
Sbjct: 664 --------------------------PVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR 697
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
+ VI L +++EA L +V+ R T AL+ G K P A+
Sbjct: 698 ---TIYNQVIEKLCVLGKLEEADTLLGKVL-RTASRSDAKTCYALMEGYLKKGVPLSAYK 753
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
V M + + D + + L +++EA
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEA 786
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 192/450 (42%), Gaps = 12/450 (2%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ G +P Y L++Q C A ++ M++ G+ N V+Y L+ G C +G
Sbjct: 131 LMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLG 190
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ + + + +++ G+ PN+ TYS L+ +ER G + KL + + V+
Sbjct: 191 SLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER----GTDEAVKLLDEIIVK-GGEPN 245
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ ++ L+ C+EG ++ + ELP +G A V Y ++ LC GR+ A ++
Sbjct: 246 LVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLA 305
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX--XCDHTYKVLVEALCH 334
EM PS V YN +I+ L G + Q +Y ++ LC
Sbjct: 306 EMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ--CRADV 392
VD + L M+ + YN S+ Q C D
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF 425
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
+VI C+ G+ A ++L +M F PD +++ +I GL A ++
Sbjct: 426 --YKSVITSLCRKGNTFAAFQLLYEMTRCGF-DPDAHTYSALIRGLCLEGMFTGAMEVLS 482
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
+ +P V +NA+I GL K++R + A V+ MV + TTY I+VEG+
Sbjct: 483 IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
D++E AK ++ I N V +++
Sbjct: 543 DELELAKEVLDELRLRKVIGQNAVDRIVMQ 572
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 212/514 (41%), Gaps = 53/514 (10%)
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
+++ + SL+ G P++ + +L+ C R A R+ M + G P+ +YT L
Sbjct: 90 SFSHLESLVTG--GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS 208
+N C G +G A ++ ++M + G N++TY+ L+RG+ L + + +L ++
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK-- 205
Query: 209 VEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
G+ AF + L+++ +E +E ++ +E+ +G V Y ++ CK G
Sbjct: 206 -----GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
R A + E+ +GF + V YN ++ L DG TY
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
+L+ +L ++A +VLK M S
Sbjct: 321 ILINSLAFHGRTEQALQVLKEM---------------------------------SKGNH 347
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
Q R + N VI CK G VD +K L +M+ + C P+ ++ + S ++V E
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR-CKPNEGTYNAIGSLCEHNSKVQE 406
Query: 447 AFDLFHRVMPENGLRPCVVT-YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
AF + + N + C Y ++I L + AF + M G D+ TY+ +
Sbjct: 407 AFYIIQSL--SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL 464
Query: 506 VEGLCDCDQIE---EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+ GLC E S + DNF A++ GLC+ + A +V+
Sbjct: 465 IRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF--NAMILGLCKIRRTDLAMEVFEMMVE 522
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
PN +Y IL+ H D A +++ E++
Sbjct: 523 KKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 160/384 (41%), Gaps = 4/384 (1%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
VA L+ LC+ + R+ E + G + + Y +++ LCK G A ++V
Sbjct: 106 VAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M+ G+ + V YN ++ GL G + Q TY L+EA
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER 225
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D+A ++L ++ K G YN+ L + +A+V++ N
Sbjct: 226 GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
++ C G +EA +L +M G AP VV++ +I+ L R ++A + +
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGGDR-APSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Query: 457 EN-GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD-Q 514
N R +YN +I L K + + M+ + TY I LC+ + +
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSK 403
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
++EA + + Y +++ LCR GN A LYE+ G P+ +Y+
Sbjct: 404 VQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 575 LINCACHLDLKSEAYQIVREMKKN 598
LI C + + A +++ M+++
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEES 487
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 148/358 (41%), Gaps = 8/358 (2%)
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
Q++ LCK R A R++ M G +P Y Y+++ L K G+ Q
Sbjct: 111 QLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
TY LV LC + ++++ + ++ +++K Y+ L A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
++ ++++ N ++ GFCK G D+A+ + +++ F A +VVS+ ++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA-NVVSYNILLR 289
Query: 437 GLLDATRVDEAFDLFHRVMPENGLR-PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG- 494
L R +EA L + + G R P VVTYN LI L R A V M
Sbjct: 290 CLCCDGRWEEANSLLAEM--DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNH 347
Query: 495 -IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR-SGNFNE 552
+T+Y ++ LC +++ ++I+ + Y AI LC + E
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQE 406
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
A + + L + Y +I C A+Q++ EM + G +PD T+ L
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL 464
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 153/393 (38%), Gaps = 79/393 (20%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
PS + + LC +++ Q + G P+ T + LL + R +
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L+ +IV G P+LV+Y+ L+ FC R DA +F ++ +G NVVSY L+
Sbjct: 233 LLDEIIVK--GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV-E 210
C G +A + EM P+ +TY++LI + G E ++ + MS
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA----FHGRTEQALQVLKEMSKGN 346
Query: 211 VESGVKVAAFANLVDSLCREGFFNEVFRIAEEL---PCQ---------GSLAEEV----- 253
+ V ++ ++ LC+EG + V + +E+ C+ GSL E
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 254 ------------------VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
Y +I SLC+ G A +++YEM + GF P Y+ +I
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 296 GLTKDG----------------DCMR--------------------GYQXXXXXXXXXXX 319
GL +G +C +
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVL-KLMLRK 351
+ TY +LVE + H +++ A+EVL +L LRK
Sbjct: 527 PNETTYAILVEGIAHEDELELAKEVLDELRLRK 559
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 479 RPN--DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV 536
PN D+F S+V+ G + T ++ LC +++++A ++ I D
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
Y ++ LC+ GN A + ++ D G N +YN L+ C L +++ Q V +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 597 KNGLNPDCVTWRILHKIQGKVR 618
+ GL P+ T+ L + K R
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKER 225
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 149/596 (25%), Positives = 247/596 (41%), Gaps = 108/596 (18%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLA-------SGSVPDHRTCNVLLARLLRSR---- 84
+S+A + D+ S + S+SLA +GS PD R + L + + +
Sbjct: 91 YSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNIPL 150
Query: 85 TPLQTWALVRSLIVAKPGFV-PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVV 143
T + T L+R + G V S++ Y RL D+ +MKN NVV
Sbjct: 151 TVVATNLLIRWF--GRMGMVNQSVLVYERL-----------DS-----NMKN-SQVRNVV 191
Query: 144 SYTTLINGYCSVGGIGDARKVFDEML--ESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
L NG + DA KV DEML ES PN +T +++ V + R L E +
Sbjct: 192 VDVLLRNGL-----VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLL--TEEKII 244
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
L R S G V + I S
Sbjct: 245 ALISRFS------------------------------------SHGVSPNSVWLTRFISS 268
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LCK R + A I+ ++ K +N ++ L ++ D R
Sbjct: 269 LCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPD 328
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
T +L+ LC VD+A EV + M K D I
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVI---------------------- 366
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
+AD I NT+I+G CK G + EA ++L M + + CAP+ V++ +I G A
Sbjct: 367 -------KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
+++ A ++ R M E+ ++P VVT N ++ G+ + N A + M +G+ + T
Sbjct: 420 GKLETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYEL 560
Y ++ C +E+A +W++ + +G D +Y A++ GLC+ ++A + +L
Sbjct: 479 YMTLIHACCSVSNVEKA-MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
+ G S ++ +YN+LI C + + Y+++ +M+K G PD +T+ L GK
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 203/483 (42%), Gaps = 17/483 (3%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G PN V T I+ C A + +++++ + ++ L+ + + D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS------LA 250
+L+ K+ EV+ V L+++LC+ +E + E++ + + A
Sbjct: 314 NDLVLKM-----DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMK-KRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ + + +ID LCKVGR A ++ MK + P+ V YN +I G + G +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXX 368
T +V +C ++ A V + + KEGV + Y + A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV-VFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
MLE+ C D +I+G C+ +A++V++ + G F + D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDL 546
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
+++ +I D ++ +++ M + G +P +TYN LI K K +
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRS 547
M DG+ TTY +++ C +++EA + D+ S ++ N +Y ++ +
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
GNF +A E+ V PN+ +YN L C +++ EM + P+ +T
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 608 RIL 610
IL
Sbjct: 726 EIL 728
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 188/463 (40%), Gaps = 50/463 (10%)
Query: 68 PDHRTCNVLLARLLRSR---TPLQTWALVRSLIVAKPGFVPS-LVNYHRLMDQFCVFRRP 123
PD T +L+ L +SR L+ + +R + + ++++ L+D C R
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 124 CDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
+A + MK C PN V+Y LI+GYC G + A++V M E ++PN +T +
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIA 240
++ G+ + L M +E E GVK V + L+ + C +
Sbjct: 447 IVGGMCRHHGLNMAVVFF------MDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
E++ G + +Y +I LC+V R H A R+V ++K+ GF + YN +I
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
+ + Y+ TY L+ D + +++ M R++G+D T
Sbjct: 560 NNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPT--- 615
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
V T VI+ +C G +DEALK+ +DM +
Sbjct: 616 -------------------------------VTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
P+ V + +I+ +A L M +RP V TYNAL + L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEE-MKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
+ MV + T I++E L D++ + + F
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 168/447 (37%), Gaps = 54/447 (12%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ ++ LC S R EA + F G D NV+ A + T + V L
Sbjct: 331 TLGILINTLCKSRRVDEALEVFE--KMRGKRTDD--GNVIKADSIHFNTLIDGLCKVGRL 386
Query: 97 IVAKPGFV---------PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTT 147
A+ V P+ V Y+ L+D +C + A + MK PNVV+ T
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
++ G C G+ A F +M + GV+ N +TY LI ++E W
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM-----YWYEK 501
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+E + L+ LC+ ++ R+ E+L G + + Y +I C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
++ +M+K G P + YN +I K D + TY
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
+++A C V ++D+A ++ K M L S+
Sbjct: 622 VIDAYCSVGELDEALKLFKDM----------------------------------GLHSK 647
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
+ + N +IN F K G+ +AL + ++M M K P+V ++ + L + T+ +
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKM-KMVRPNVETYNALFKCLNEKTQGETL 706
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGL 474
L M E P +T L+ L
Sbjct: 707 LKLMDE-MVEQSCEPNQITMEILMERL 732
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 233/555 (41%), Gaps = 18/555 (3%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC + EA F+ L+ G D L+ + R + ++++ + +
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM--EQR 376
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G PS++ Y+ +++ C+ R +A + ++G +V++Y+TL++ Y V I
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAV 431
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++ LE+ + + + ++L++ L L G L+ M E++ A +A
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFL----LMGAYGEADALYRAMP-EMDLTPDTATYA 486
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++ C+ G E + EL + S++ V Y ++ID+LCK G A ++ E+ ++
Sbjct: 487 TMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEK 545
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G ++H + +G C + LC + A
Sbjct: 546 GLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAA 605
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
EV +M R++G+ T I + + DVI +ING
Sbjct: 606 IEVYMIM-RRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIING 664
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN-GL 460
CK G + +AL L + + +++ ++I+GL + EA LF + EN GL
Sbjct: 665 LCKEGFLVKALN-LCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL--ENIGL 721
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
P VTY LI L K DA + SMVS G+ + Y IV+G C Q E+A
Sbjct: 722 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR 781
Query: 521 FWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
+ D F ++++KG C+ G+ EA E D +S + F + LI C
Sbjct: 782 VVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC 841
Query: 581 HLDLKSEAYQIVREM 595
EA ++REM
Sbjct: 842 TKGRMEEARGLLREM 856
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/580 (23%), Positives = 234/580 (40%), Gaps = 56/580 (9%)
Query: 69 DHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
D+ C+ +++ + P S V VP+LV Y L+ C + +
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFES-AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+ +++ G + V Y+ I+GY G + DA EM+E G+ + ++YS+LI G+
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 288
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+E ++E L+ K+ ++ GV+ + + ++ LC+ G E F + +
Sbjct: 289 KEGNVEEALGLLGKM-------IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV 341
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G +E +Y +ID +C+ G + A ++ +M++RG PS + YN +I+GL CM G
Sbjct: 342 GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL-----CMAG 396
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
TY L+++ V ++D E+ + L + + NI L+A
Sbjct: 397 RVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKA 456
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
+M E D T T+I G+CKTG ++EAL++ ++ A
Sbjct: 457 FLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA 516
Query: 427 DVVSFTTVISGLLDATRVDEAFD-------------------LFHRVMPENGLRP----- 462
V + +I L +D A + L H + G +
Sbjct: 517 --VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
Query: 463 ----------CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD--STTYTIIVEGLC 510
C+ N I L K A VY M G+ ST +V+ L
Sbjct: 575 YGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
D + + + D Y I+ GLC+ G +A + GV+ N
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVID---YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+YN LIN C EA ++ ++ GL P VT+ IL
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGIL 731
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 233/551 (42%), Gaps = 55/551 (9%)
Query: 33 SLQHSIATTLH-ALCDSNRFSEAHQCFSISLASGSV-PDHRTCNVLLARLLRSRTPLQTW 90
++ H I + + A + NR+ +A + +I ++ S+ P + L+ +R
Sbjct: 58 NINHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKG 117
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRG-HCP--NVVSYTT 147
L+ + G PS + + L+ +F +A + M N+ + P N V +
Sbjct: 118 LLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC-SA 176
Query: 148 LINGYCSVGGIGDARKVFDEMLESGV-EPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+I+G+C +G A F+ ++SGV PN +TY+ L+ + Q ++ R+L+ +L E
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL-ED 235
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
E + ++N + + G + E+ +G + V Y +ID L K G
Sbjct: 236 EGFEFD----CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG 291
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
A ++ +M K G P+ + Y II GL K G + + Y
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
L++ +C ++++A +L M + G+
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDM-EQRGI-------------------------------- 378
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
+ ++T NTVING C G V EA +V K DV++++T++ + +D
Sbjct: 379 --QPSILTYNTVINGLCMAGRVSEADEV------SKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
++ R + E + +V N L++ + +A +Y +M + D+ TY ++
Sbjct: 431 VLEIRRRFL-EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMI 489
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+G C QIEEA +++ + S + Y I+ LC+ G + A L EL + G+
Sbjct: 490 KGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLY 548
Query: 567 PNIFSYNILIN 577
+I + L++
Sbjct: 549 LDIHTSRTLLH 559
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 124/602 (20%), Positives = 237/602 (39%), Gaps = 102/602 (16%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T ++ LC + R SEA + ++ G V D T + LL ++ + + R + A
Sbjct: 387 TVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 100 KPGFVP-SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
K +P LV + L+ F + +A ++ M P+ +Y T+I GYC G I
Sbjct: 442 K---IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER---MSVEVESGV 215
+A ++F+E+ +S V ++ Y+ +I + ++ L+ E++ +LWE+ + + +
Sbjct: 499 EEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS---LCKVGRYHGAA 272
+ AN D +G V+ + + L +V G + D+ LCK G + A
Sbjct: 558 LHSIHANGGD----KGILGLVYGLEQ-------LNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 273 RIVYEMKKRGFV---PSDVL-------------------------------YNYIIHGLT 298
+ M+++G PS +L Y II+GL
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 299 KDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTR 358
K+G ++ TY L+ LC + +A + + V
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 359 IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM 418
Y I + SM+ ++I N++++G+CK G ++A++V+
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRK 786
Query: 419 LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
+MG+ PD + +++I G ++EA +F +N + + LI+G
Sbjct: 787 MMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN-ISADFFGFLFLIKGFCTKG 844
Query: 479 RPNDAFGVYSSMVS-----------DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDV-- 525
R +A G+ M+ D A+S + + LC+ ++ +A ++
Sbjct: 845 RMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISS 904
Query: 526 -IWPSG-------------------------IHDNFVYAAILKGLCRSGNFNEACHFLYE 559
I+PSG +HD + + LC SG +A F+
Sbjct: 905 TIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMS 964
Query: 560 LV 561
++
Sbjct: 965 VL 966
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 9/290 (3%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXS 382
TY LV ALC + VD+ R++++ L EG + Y+ ++
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVR-RLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRE 267
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M+E DV++ + +I+G K G+V+EAL +L M+ + P+++++T +I GL
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI-KEGVEPNLITYTAIIRGLCKMG 326
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+++EAF LF+R++ G+ Y LI G+ + N AF + M GI TY
Sbjct: 327 KLEEAFVLFNRILSV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
++ GLC ++ EA D + + D Y+ +L + N + ++
Sbjct: 386 NTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
+ + ++ NIL+ + EA + R M + L PD T+ + K
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIK 490
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 214/535 (40%), Gaps = 83/535 (15%)
Query: 21 RFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARL 80
+F + P + + + + LH LC + + ++A + + VP +C+ L+ L
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 81 LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP 140
R +L C+ R M G P
Sbjct: 150 AR---------------------------IDQLDKAMCILRV----------MVMSGGVP 172
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
+ ++Y +I C G I A + ++M SG P+ +TY+ +IR + G E
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD----YGNAEQA 228
Query: 201 CKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
+ W+ ++++G + + LV+ +CR + E++ +G + V Y +
Sbjct: 229 IRFWKD---QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
++ C+ G A ++ + G + V YN ++H L
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL--------------------- 324
Query: 319 XXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXX 378
C H Y D+ E+L +M + YNI +
Sbjct: 325 --CSHEYW------------DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAID 370
Query: 379 XXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
MLE +C D++T NTV+ K G VD+A+++L +L C P ++++ +VI GL
Sbjct: 371 FFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL-GLLKNTCCPPGLITYNSVIDGL 429
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
+ +A +L+H+ M + G+ P +T +LI G + +A V + G G
Sbjct: 430 AKKGLMKKALELYHQ-MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
+TY ++++GLC +IE A ++ D +Y AI+KG+ G +EA
Sbjct: 489 GSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 179/441 (40%), Gaps = 7/441 (1%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
+++ CS G + DA K+ + M P+ + S L+RG+ + L+ + MC L R+
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLD---KAMCIL--RV 164
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
V + ++ +LC++G + E++ GS + + Y +I + G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
A R + + G P + Y ++ + + R + TY
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
LV C ++++ V++ +L T YN L + M ++
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
VIT N +ING CK + A+ ML K C PD+V++ TV+ + VD+A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK-CLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
+L ++ P ++TYN++I GL K A +Y M+ GI D T ++
Sbjct: 404 IELLG-LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
G C + +EEA + Y +++GLC+ A + ++ G P
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 568 NIFSYNILINCACHLDLKSEA 588
+ Y ++ + + SEA
Sbjct: 523 DETIYTAIVKGVEEMGMGSEA 543
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 15/430 (3%)
Query: 186 GVLQERDLEGGRELM------------CKLWERMSVEVESGVKVAAFANLVDSLCREGFF 233
G + E D E E++ CKL E M+ + + +NLV L R
Sbjct: 97 GPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVP-HFPSCSNLVRGLARIDQL 155
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
++ I + G + + + Y +I +LCK G A ++ +M G P + YN +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
I + G+ + + TY VLVE +C +A EVL+ M +
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC 275
Query: 354 VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
YN + +L + +T NT+++ C DE +
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
+L M +C P V+++ +I+GL A + A D F++++ + L P +VTYN ++
Sbjct: 336 ILNIMYQTSYC-PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL-PDIVTYNTVLGA 393
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
+ K +DA + + + TY +++GL +++A +H ++ D
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
+ +++ G CR+ EA L E + G +Y ++I C A ++V
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 594 EMKKNGLNPD 603
M G PD
Sbjct: 514 IMLTGGCKPD 523
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
LV L + +DKA +L++M+ GV T YN+ + M S
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
DVIT NTVI G+ ++A++ +D L C P ++++T ++ + A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG-CPPFMITYTVLVELVCRYCGSARA 263
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN--DAFGVYSSMVSDGIGADSTTYTII 505
++ + E G P +VTYN+L+ Y +R N + V ++S G+ ++ TY +
Sbjct: 264 IEVLEDMAVE-GCYPDIVTYNSLVN--YNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ LC + +E + + + S Y ++ GLC++ + A F Y++++
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
P+I +YN ++ + +A +++ +K P +T+
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 4/374 (1%)
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
+E +++ +LC G+ A ++V M + VP + ++ GL + +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
TY +++ LC + A +L+ M YN +R
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
L++ C +IT ++ C+ A++VL+DM + + C PD+V+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV-EGCYPDIVT 281
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ ++++ ++E + ++ +GL VTYN L+ L + ++ + + M
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHIL-SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
TY I++ GLC + A F++ ++ + D Y +L + + G
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++A L L ++ P + +YN +I+ L +A ++ +M G+ PD +T R L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 611 HKIQGKVRKQTLSE 624
I G R + E
Sbjct: 461 --IYGFCRANLVEE 472
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
G D + ++ L ++ +A L VM + P + + L+RGL ++ +
Sbjct: 97 GPITENDEETNNEILHNLCSNGKLTDACKLV-EVMARHNQVPHFPSCSNLVRGLARIDQL 155
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+ A + MV G D+ TY +I+ LC I A D+ D Y +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
++ + GN +A F + + +G P + +Y +L+ C + A +++ +M G
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC 275
Query: 601 NPDCVTWRILHKIQGKVRKQTLSEYQSL 628
PD VT+ L + R+ L E S+
Sbjct: 276 YPDIVTYNSL--VNYNCRRGNLEEVASV 301
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 7/408 (1%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P L+ ++ L++ C A + +M+ G PN VSY TLI G CSV + A
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM--SVEVESGVKVAA 219
+F+ M + G+ PN +T ++++ + Q+ + + KL E + S + + + +
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK---KLLEEILDSSQANAPLDIVI 267
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
L+DS + G + + +E+ + A+ VVY +I LC G A + +M
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
KRG P YN +I L K+G +YKV+++ LC DV+
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A E L ML+ + + ++N+ + ML + +V T N +I
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G+ K G + +A V +M K PD ++ ++ + AF L+ M G
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKI-HPDTTTYNLLLGAACTLGHLRLAFQLYDE-MLRRG 505
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
+P ++TY L+RGL R A + S + + GI D + I+ +
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 178/444 (40%), Gaps = 42/444 (9%)
Query: 191 RDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
RDL +L LW R + + SGV + +L++ LC+ G+ + + E+ G
Sbjct: 129 RDLCLQGKLDAALWLRKKM-IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGP 187
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG---DCMR 305
V Y +I LC V A + M K G P+ V N I+H L + G + +
Sbjct: 188 SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247
Query: 306 GYQXXXXXXXXXXXXCDHTY-KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
D +L+++ +V +A EV K M +K + +YN+ +
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
R M++ DV T NT+I+ CK G DEA + M G
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV- 366
Query: 425 APDVVSFTTVISGLL---DATRVDE-------------------AFDLFHR--------- 453
APD +S+ +I GL D R +E D + R
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 454 ---VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+M G++P V T NALI G K R DA+ V + M S I D+TTY +++ C
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ A + +++ D Y +++GLC G +A L + +G++ +
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 571 SYNILINCACHLDLKSEAYQIVRE 594
+ IL L EAY + ++
Sbjct: 547 PFLILAKKYTRLQRPGEAYLVYKK 570
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 167/362 (46%), Gaps = 8/362 (2%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
++ ++ LC G+ A + +M G +P + +N++++GL K G +
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY-NIYLRAXXXXXX 372
+Y L++ LC V +VDKA + M K G+ R+ NI + A
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM-NKYGIRPNRVTCNIIVHALCQKGV 241
Query: 373 XXXXXXXXXSML--ESQCRA--DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
+ SQ A D++ +++ K G+V +AL+V ++M K D
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQ-KNVPADS 300
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
V + +I GL + + A+ F M + G+ P V TYN LI L K + ++A ++
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYG-FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
+M + G+ D +Y +I++GLC + A F ++ S + + ++ ++ G R G
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ + A L ++ GV PN+++ N LI+ +A+ + EM+ ++PD T+
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479
Query: 609 IL 610
+L
Sbjct: 480 LL 481
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 173/458 (37%), Gaps = 79/458 (17%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S T + LC N +A F+ G P+ TCN+++ AL +
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH------------ALCQKG 240
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ N +L+++ D ++V T L++ G
Sbjct: 241 VIGN--------NNKKLLEE-------------ILDSSQANAPLDIVICTILMDSCFKNG 279
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A +V+ EM + V +S+ Y+V+IRG+ ++ MC + V+ GV
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM-------VKRGVN 332
Query: 217 --VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
V + L+ +LC+EG F+E + + G +++ Y +I LC G + A
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ M K +P +L+N +I G + G
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYG--------------------------------- 419
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
D A VL LML N + M ++ D T
Sbjct: 420 --DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N ++ C G + A ++ +ML + C PD++++T ++ GL R+ +A L R+
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLR-RGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
G+ V + L + +L+RP +A+ VY ++
Sbjct: 537 QA-TGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA 573
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
++++I++ LC G + A +++ SGV P + ++N L+N C +A +VREM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 596 KKNGLNPDCVTWRILHK 612
++ G +P+CV++ L K
Sbjct: 183 REMGPSPNCVSYNTLIK 199
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 198/510 (38%), Gaps = 48/510 (9%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRP--CD 125
PD + C +L L+R R W + +I G VP + Y L C F++
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMI--SRGLVPDVHIYFVLFQ--CCFKQGLYSK 217
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
++ +M + G PNV YT I C + +A K+F+ M + GV PN TYS +I
Sbjct: 218 KEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI- 276
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
D C+ G + + + +E+
Sbjct: 277 ---------------------------------------DGYCKTGNVRQAYGLYKEILV 297
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
L VV+G ++D CK A + M K G P+ +YN +IHG K G+ +
Sbjct: 298 AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLR 365
TY +L+ LC V +A + + M + + YN +
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA 425
M S ++IT +T+I+G+C + A+ + +M + K
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI-KGIV 476
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
PDVV++T +I + EA L+ M E G+ P T+ L+ G +K R + A
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSD-MLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
Y + +T ++EGLC I A F+ D+ D Y ++LKG
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+ + +++ +G+ PN+ +L
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 184/458 (40%), Gaps = 13/458 (2%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
+ L+ L RF + + ++ G VPD VL + + L+ +
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM--T 226
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
G P++ Y + C + +A ++F MK G PN+ +Y+ +I+GYC G +
Sbjct: 227 SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KV 217
A ++ E+L + + PN + + L+ G + R+L R L + V+ GV +
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM-------VKFGVDPNL 339
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ L+ C+ G E + E+ + Y +I+ LC + A R+ +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
MK PS YN +IHG K+ + + T+ L++ C+V D
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ A + M K V Y + A MLE+ + T
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+++GF K G + A+ Q+ + C + V FT +I GL + A F M
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSD-MRS 577
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGI 495
G+ P + +Y ++++G + KR D + M+ GI
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 212/504 (42%), Gaps = 21/504 (4%)
Query: 126 AHRIFFDMKN-RGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+HR+F +++ + ++ ++ LI + +G +A V EM P+S ++
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSIL 171
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEE 242
G+++ R + +W + + G+ V + L ++G +++ ++ +E
Sbjct: 172 NGLVRRRRFDS-------VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDE 224
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ G +Y I LC+ + A ++ MKK G +P+ Y+ +I G K G+
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT-RIYN 361
+ Y + LV+ C ++ AR + M+ K GVD +YN
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV-KFGVDPNLYVYN 343
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
+ M DV T +ING C V EA ++ Q M
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
+ P ++ ++I G +++A DL M +G+ P ++T++ LI G ++
Sbjct: 404 RI-FPSSATYNSLIHGYCKEYNMEQALDLCSE-MTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAI 540
A G+Y M GI D TYT +++ ++EA + D++ +GIH N +A +
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML-EAGIHPNDHTFACL 520
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ G + G + A F E N + LI C A + +M+ G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 601 NPDCVTWRILHKIQGKVRKQTLSE 624
PD ++ + ++G ++++ +++
Sbjct: 581 TPDICSY--VSMLKGHLQEKRITD 602
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 208/482 (43%), Gaps = 71/482 (14%)
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
DA +F +M ES P+ + +S L+ + + E L L E + + + + +
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHD----LYS 116
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEE------VVYGQMIDSLCKVGRYHGAAR 273
F L+D CR R++ L C G + + V +G +++ C V R++ A
Sbjct: 117 FTTLIDCFCRCA------RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
+V ++ G+ P+ V+YN II ++LC
Sbjct: 171 LVDQIVGLGYEPNVVIYNTII-----------------------------------DSLC 195
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
V+ A +VLK M +K G+ + YN + M+ DV
Sbjct: 196 EKGQVNTALDVLKHM-KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
IT + +I+ + K G + EA K +M+ + P++V++ ++I+GL +DEA + +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQ-RSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
V+ G P VTYN LI G K KR +D + M DG+ D+ TY + +G C
Sbjct: 314 -VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 513 DQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ A+ ++ G+H D + + +L GLC G +A L +L S I +
Sbjct: 373 GKFSAAEKVLGRMV-SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT-------------WRILHKIQGKVR 618
YNI+I C D +A+ + + G++PD +T WR H++ K++
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Query: 619 KQ 620
K+
Sbjct: 492 KE 493
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 207/524 (39%), Gaps = 68/524 (12%)
Query: 2 QGLTFLISLKPKPFI------------PFSLRFSTTIATPSSPSLQHSIATTLHALCDSN 49
+ + +I+L K F+ SLR + A + + + LH++
Sbjct: 3 RSIVIVIALTAKGFLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSI---- 58
Query: 50 RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI--VAKPGFVPSL 107
+F++A F S +P V +RLL + L + V SL + G L
Sbjct: 59 KFNDALTLFCDMAESHPLPSI----VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
++ L+D FC R A M G P++V++ +L+NG+C V +A + D+
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
++ G EPN + Y+ +I DSL
Sbjct: 175 IVGLGYEPNVVIYNTII----------------------------------------DSL 194
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
C +G N + + + G + V Y +I L G + +ARI+ +M + G P
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
+ ++ +I K+G + + TY L+ LC +D+A++VL +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
++ K YN + M D T NT+ G+C+ G
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 408 VDEALKVLQDMLMGKFCA--PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVV 465
A KVL M+ C PD+ +F ++ GL D ++ +A + + ++
Sbjct: 375 FSAAEKVLGRMVS---CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG-II 430
Query: 466 TYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
TYN +I+GL K + DA+ ++ S+ G+ D TY ++ GL
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 156/363 (42%), Gaps = 6/363 (1%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K GF PS+V + L++ FC R +A + + G+ PNVV Y T+I+ C G +
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
A V M + G+ P+ +TY+ LI + ++ + RM + + V
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM-RMGISPD----VIT 256
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F+ L+D +EG E + E+ + V Y +I+ LC G A +++ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+GF P+ V YN +I+G K G + TY L + C
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A +VL M+ +NI L + +S+ +IT N +I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G CK V++A + + + K +PDV+++ T++ GL EA +L+ ++ E+G
Sbjct: 437 KGLCKADKVEDAWYLFCSLAL-KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDG 495
Query: 460 LRP 462
L P
Sbjct: 496 LMP 498
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 190/457 (41%), Gaps = 47/457 (10%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHR 112
+A QCF +S R C LL R+++ W ++ A GF ++ ++
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA--GFPLNVYVFNI 245
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
LM++FC DA ++F ++ R P VVS+ TLINGYC VG + + ++ +M +S
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
P+ TYS LI + +E ++G L ++ +R + + F L+ R G
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND-----VIFTTLIHGHSRNGE 360
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
+ + +++ +G + V+Y +++ CK G A IV M +RG P + Y
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKE 352
+I G + GD + + LV +C V A L+ MLR
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR-- 478
Query: 353 GVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEAL 412
+ + D +T +++ FCK G
Sbjct: 479 ---------------------------------AGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 413 KVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIR 472
K+L++M P VV++ +++GL ++ A D+ M G+ P +TYN L+
Sbjct: 506 KLLKEM-QSDGHVPSVVTYNVLLNGLCKLGQMKNA-DMLLDAMLNIGVVPDDITYNTLLE 563
Query: 473 GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
G + R ++ Y GI AD +Y IV L
Sbjct: 564 GHH---RHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/554 (22%), Positives = 222/554 (40%), Gaps = 110/554 (19%)
Query: 50 RFSEAHQCFS-----ISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP--G 102
RF H+ F+ I L + +V ++ + TP+ + LV +L++ G
Sbjct: 126 RFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGF-LVDALMITYTDLG 184
Query: 103 FVPS------LVNYHR----------LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
F+P L HR L+D+ + ++ + G NV +
Sbjct: 185 FIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFN 244
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
L+N +C G I DA+KVFDE+ + ++P
Sbjct: 245 ILMNKFCKEGNISDAQKVFDEITKRSLQPT------------------------------ 274
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
V +F L++ C+ G +E FR+ ++ + + Y +I++LCK
Sbjct: 275 ----------VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG--DCMR-GYQXXXXXXXXXXXXCDH 323
+ GA + EM KRG +P+DV++ +IHG +++G D M+ YQ
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL-- 382
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
Y LV C D+ AR ++ M+R+
Sbjct: 383 -YNTLVNGFCKNGDLVAARNIVDGMIRR-------------------------------- 409
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
R D IT T+I+GFC+ G V+ AL++ ++M D V F+ ++ G+ R
Sbjct: 410 ---GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI-ELDRVGFSALVCGMCKEGR 465
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
V +A + R M G++P VTY ++ K F + M SDG TY
Sbjct: 466 VIDA-ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+++ GLC Q++ A ++ + D+ Y +L+G R N ++ + +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQKPEI 581
Query: 564 GVSPNIFSYNILIN 577
G+ ++ SY ++N
Sbjct: 582 GIVADLASYKSIVN 595
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 160/405 (39%), Gaps = 37/405 (9%)
Query: 206 RMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV 265
R+S + V + NL+D + + ++ E+ G V+ +++ CK
Sbjct: 194 RLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 266 GRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTY 325
G A ++ E+ KR P+ V +N +I+G K G+ G++ TY
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
L+ ALC +D A + M ++ + I+ + ML
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
+ D++ NT++NGFCK G D+V+ ++ G++
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNG--------------------DLVAARNIVDGMI------ 407
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
GLRP +TY LI G + A + M +GI D ++ +
Sbjct: 408 -----------RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
V G+C ++ +A+ +++ D+ Y ++ C+ G+ L E+ G
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
P++ +YN+L+N C L A ++ M G+ PD +T+ L
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 132/274 (48%), Gaps = 17/274 (6%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI- 97
+ ++ALC N+ AH F G +P+ +V+ L+ + L++
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPN----DVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 98 -VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ G P +V Y+ L++ FC A I M RG P+ ++YTTLI+G+C G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQE-RDLEGGRELMCKLWERMSVEVESGV 215
+ A ++ EM ++G+E + + +S L+ G+ +E R ++ R L L +G+
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML--------RAGI 481
Query: 216 KV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
K + ++D+ C++G F++ +E+ G + V Y +++ LCK+G+ A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
++ M G VP D+ YN ++ G + + + Y
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 194/465 (41%), Gaps = 42/465 (9%)
Query: 104 VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARK 163
+PS+ ++ RL+ ++ ++ M+ G N+ + L+N +C + A
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANL 223
+M++ G EP+ +T+ L+ G + G R V + V + +
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCR-----GDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+D LC+ + + + G + V Y +I LC GR+ A R+V M KR
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
P +N +I K+G + TY +L+ LC +D+A E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
+ M+ K C DV+T + +ING+C
Sbjct: 313 MFGFMVSK-----------------------------------GCFPDVVTYSILINGYC 337
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
K+ V+ +K+ +M + + V++T +I G A +++ A ++F R M G+ P
Sbjct: 338 KSKKVEHGMKLFCEMSQ-RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR-MVFCGVHPN 395
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
++TYN L+ GL + A + + M +G+ AD TY II+ G+C ++ +A +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 524 DVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
+ + D + Y ++ GL + G EA ++ + G+ PN
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 181/424 (42%), Gaps = 44/424 (10%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
TCN+LL R + + +I K G PS+V + L++ FC R DA +F
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMI--KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M G+ PNVV Y T+I+G C + +A + + M + G+ P+ +TY+ LI G+
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
++ + +R E V F L+D+ +EG +E EE+ + +
Sbjct: 236 RWSDATRMVSCMTKR-----EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V Y +I LC R A + M +G P V Y+ +I+G K G +
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY +L++ C ++ A E+ +
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR------------------------- 385
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M+ ++IT N +++G C G +++AL +L DM A D+V++
Sbjct: 386 ----------RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA-DIVTY 434
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+I G+ A V +A+D++ + + GL P + TY ++ GLYK +A ++ M
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQ-GLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Query: 492 SDGI 495
DGI
Sbjct: 494 EDGI 497
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 186/420 (44%), Gaps = 41/420 (9%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+A F+ L+ ++ + ++ V + E++ G +++ C+ + A +
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M K G PS V + +++G + Y +++ LC
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
VD A ++L M K+G+ DV+T N
Sbjct: 201 QVDNALDLLNRM-EKDGIG----------------------------------PDVVTYN 225
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
++I+G C +G +A +++ M + PDV +F +I + RV EA + F+ M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEA-EEFYEEMI 283
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
L P +VTY+ LI GL R ++A ++ MVS G D TY+I++ G C ++E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+ ++ + + Y +++G CR+G N A +V GV PNI +YN+L+
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL--SINYEG 634
+ C +A I+ +M+KNG++ D VT+ I+ I+G + +++ + S+N +G
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNII--IRGMCKAGEVADAWDIYCSLNCQG 461
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 208/495 (42%), Gaps = 42/495 (8%)
Query: 109 NYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEM 168
+Y ++ F + D+ +FF M P++ ++ L++ + ++++M
Sbjct: 48 DYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 169 LESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLC 228
G+ N T ++L+ + L + K+ +++ + F +L++ C
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM-----IKLGHEPSIVTFGSLLNGFC 162
Query: 229 REGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDV 288
R + + +++ G V+Y +ID LCK + A ++ M+K G P V
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 289 LYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM 348
YN +I G LC A ++ M
Sbjct: 223 TYNSLISG-----------------------------------LCSSGRWSDATRMVSCM 247
Query: 349 LRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV 408
++E +N + A M+ D++T + +I G C +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
DEA ++ M+ K C PDVV+++ +I+G + +V+ LF M + G+ VTY
Sbjct: 308 DEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE-MSQRGVVRNTVTYT 365
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
LI+G + + N A ++ MV G+ + TY +++ GLCD +IE+A D+
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
D Y I++G+C++G +A L G+ P+I++Y ++ L+ EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 589 YQIVREMKKNGLNPD 603
+ R+MK++G+ P+
Sbjct: 486 DALFRKMKEDGILPN 500
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI-- 97
T + LC S + A + G PD T N L++ L S W+ ++
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS----GRWSDATRMVSC 246
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K P + ++ L+D R +A + +M R P++V+Y+ LI G C
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ +A ++F M+ G P+ +TYS+LI G + + +E G +L C++ +R V
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-----NT 361
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ L+ CR G N I + G + Y ++ LC G+ A I+ +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGD 302
M+K G V YN II G+ K G+
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGE 446
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 41 TLHALCDS----NRFSEAHQCFSISLASGSVPDHRTCNVLLARL-LRSRTPLQTWALVRS 95
T +AL D+ R SEA + + + PD T ++L+ L + SR L +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR--LDEAEEMFG 315
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+V+K G P +V Y L++ +C ++ ++F +M RG N V+YT LI GYC
Sbjct: 316 FMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G + A ++F M+ GV PN +TY+VL+ G+ +E ++ + ++ ++ +
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM-QKNGMDAD--- 430
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ + ++ +C+ G + + I L CQG + + Y M+ L K G A +
Sbjct: 431 -IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 276 YEMKKRGFVPSD 287
+MK+ G +P++
Sbjct: 490 RKMKEDGILPNE 501
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 207/501 (41%), Gaps = 55/501 (10%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
++ F R +A + DM+N+G P+ ++ ++ +G I A VFDEM G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
V P+S +Y +++ G ++ ++ + + +R + + + ++ +LC G
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL-----ILTALCENGL 267
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
N ++ G + + +ID LCK G A ++ EM + G+ P N
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP-----NV 322
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCD------HTYKVLVEALCHVFDVDKAREVLK 346
H DG C RG+ D HTY ++ C +++A E+L
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA-EMLF 381
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
++++G+ +V T T+ING CK G
Sbjct: 382 SRMKEQGL----------------------------------FPNVNTYTTLINGHCKAG 407
Query: 407 SVDEALKVLQDMLMG-KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVV 465
S A +++ LMG + P++ ++ I L +R EA++L ++ GL V
Sbjct: 408 SFGRAYELMN--LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF-SCGLEADGV 464
Query: 466 TYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDV 525
TY LI+ K N A + M G AD I++ C +++E++ + V
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 526 IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLK 585
+ I Y +++ C+ G+ + A + + + G P+ F+Y LI+ C +
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 586 SEAYQIVREMKKNGLNPDCVT 606
EA ++ M GL+P VT
Sbjct: 585 DEACKLYEAMIDRGLSPPEVT 605
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 201/512 (39%), Gaps = 12/512 (2%)
Query: 54 AHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRL 113
A F G VPD + +++ R + + +I + GF+P +
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI--QRGFIPDNATCTLI 258
Query: 114 MDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV 173
+ C A F M + G PN++++T+LI+G C G I A ++ +EM+ +G
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFF 233
+PN T++ LI G+ + G E +L+ ++ V + +++ C+E
Sbjct: 319 KPNVYTHTALIDGLCK----RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 374
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
N + + QG Y +I+ CK G + A ++ M GF+P+ YN
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
I L K Y+ TY +L++ C D+++A M +
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 354 VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
R+ NI + A ++ T ++I+ +CK G +D ALK
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
+M C PD ++ ++ISGL + VDEA L+ M + GL P VT L
Sbjct: 555 YFHNMKRHG-CVPDSFTYGSLISGLCKKSMVDEACKLYE-AMIDRGLSPPEVTRVTLA-- 610
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
Y+ + ND+ + T +V LC ++ A F+ ++ D
Sbjct: 611 -YEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 669
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
AA SG N L E + GV
Sbjct: 670 RVTLAAFTTACSESGK-NNLVTDLTERISRGV 700
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 43/381 (11%)
Query: 240 AEELPCQGSL--AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGL 297
A+ L G+L A EV+ M+ + ++GR + A +V +M+ +G PS + N ++
Sbjct: 134 ADSLLANGNLQKAHEVMRC-MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIA 192
Query: 298 TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
+ G L+E +VFD R V V +
Sbjct: 193 VELG--------------------------LIEYAENVFDEMSVRGV---------VPDS 217
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
Y + + M++ D T ++ C+ G V+ A+ +
Sbjct: 218 SSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRK 277
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
M+ F P++++FT++I GL + +AF++ M NG +P V T+ ALI GL K
Sbjct: 278 MIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEE-MVRNGWKPNVYTHTALIDGLCKR 335
Query: 478 KRPNDAFGVYSSMV-SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF- 535
AF ++ +V SD + TYT ++ G C D++ A+ + + G+ N
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR-MKEQGLFPNVN 394
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
Y ++ G C++G+F A + + D G PNI++YN I+ C EAY+++ +
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 596 KKNGLNPDCVTWRILHKIQGK 616
GL D VT+ IL + Q K
Sbjct: 455 FSCGLEADGVTYTILIQEQCK 475
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 155/381 (40%), Gaps = 9/381 (2%)
Query: 231 GFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
G NE + ++ QG + +++ ++G A + EM RG VP Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 291 NYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA----REVLK 346
++ G +DG + + T +++ ALC V++A R+++
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
L + ++ T + + M+ + + +V T +I+G CK G
Sbjct: 281 LGFKPNLINFTSLID----GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
++A ++ ++ P+V ++T++I G +++ A LF R M E GL P V T
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR-MKEQGLFPNVNT 395
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
Y LI G K A+ + + M +G + TY ++ LC + EA +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
D Y +++ C+ + N+A F + +G ++ NILI C
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 587 EAYQIVREMKKNGLNPDCVTW 607
E+ ++ + + GL P T+
Sbjct: 516 ESERLFQLVVSLGLIPTKETY 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 47/301 (15%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
+ + + LC +A + + +G P+ T L+ L + + + L L
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ + + P++ Y ++ +C + A +F MK +G PNV +YTTLING+C G
Sbjct: 349 VRSDT-YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 157 GIGDARKVFDEMLESGVEPN-----------------------------------SLTYS 181
G A ++ + M + G PN +TY+
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVE---SGVKVAAFANLVDSLCREGFFNEVFR 238
+LI+ ++ D+ C++ + E + + + +AAF CR+ E R
Sbjct: 468 ILIQEQCKQNDINQALAFFCRM-NKTGFEADMRLNNILIAAF-------CRQKKMKESER 519
Query: 239 IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLT 298
+ + + G + + Y MI CK G A + + MK+ G VP Y +I GL
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 299 K 299
K
Sbjct: 580 K 580
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 199/507 (39%), Gaps = 80/507 (15%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ + GF P + ++ R +A + DM NV ++ +IN C G
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A+ M G++P +TY+ L++G +EG R
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR------------------- 280
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
I E+ +G + Y ++ +C GR A+ ++
Sbjct: 281 ---------------------LIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLR 316
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EMK+ G VP V YN +I G + +GD + +TY L+ L
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ A E+L +R++G+ D +T N
Sbjct: 377 KIEAA-EILIREIREKGI----------------------------------VLDSVTYN 401
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+ING+C+ G +A L D +M P ++T++I L + EA +LF +V+
Sbjct: 402 ILINGYCQHGDAKKAF-ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ G++P +V N L+ G + + AF + M I D TY ++ GLC + E
Sbjct: 461 K-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
EA+ ++ D+ Y ++ G + G+ A E++ G +P + +YN L+
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPD 603
A +++REMK G+ P+
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 194/501 (38%), Gaps = 78/501 (15%)
Query: 46 CDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL--------- 96
C EA +CF + G P TCN +L L R W +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 97 ------------------------IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD 132
I+ G P++V Y+ L+ F + R A I +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
MK++G P++ +Y +++ C+ G A +V EM E G+ P+S++Y++LIRG D
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
LE AFA +R +E+ QG +
Sbjct: 343 LE-----------------------MAFA---------------YR--DEMVKQGMVPTF 362
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
Y +I L + A ++ E++++G V V YN +I+G + GD + +
Sbjct: 363 YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
TY L+ LC +A E+ + ++ K + N +
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
M D +T N ++ G C G +EA +++ +M + PD +S+
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM-KRRGIKPDHISYN 541
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
T+ISG AF + M G P ++TYNAL++GL K + A + M S
Sbjct: 542 TLISGYSKKGDTKHAF-MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 493 DGIGADSTTYTIIVEGLCDCD 513
+GI + +++ ++E + + D
Sbjct: 601 EGIVPNDSSFCSVIEAMSNLD 621
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 199/500 (39%), Gaps = 45/500 (9%)
Query: 135 NRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLE 194
+R + + + L+ C + + +A + F M E G P + T + ++ + + +E
Sbjct: 148 DRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIE 207
Query: 195 GGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
++ +E++S V F +++ LC+EG + + G V
Sbjct: 208 NAWVFYADMYR---MEIKSNV--YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y ++ GR GA I+ EMK +GF P YN I+ + +G
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG------------- 309
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
+A EVL+ M V + YNI +R
Sbjct: 310 -------------------------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M++ T NT+I+G + EA ++L + K D V++ +
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI-EAAEILIREIREKGIVLDSVTYNIL 403
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I+G +AF L H M +G++P TY +LI L + + +A ++ +V G
Sbjct: 404 INGYCQHGDAKKAFAL-HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEAC 554
+ D +++G C ++ A S ++ S D+ Y +++GLC G F EA
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 555 HFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQ 614
+ E+ G+ P+ SYN LI+ A+ + EM G NP +T+ L K
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 615 GKVRKQTLSEYQSLSINYEG 634
K ++ L+E + EG
Sbjct: 583 SKNQEGELAEELLREMKSEG 602
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 21/318 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L +C+ R SE + G VPD + N+L+ R + L+ R +V K
Sbjct: 302 LSWMCNEGRASEVLREMK---EIGLVPDSVSYNILI-RGCSNNGDLEMAFAYRDEMV-KQ 356
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G VP+ Y+ L+ + + A + +++ +G + V+Y LINGYC G DA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG---DA 413
Query: 162 RKVF---DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK-- 216
+K F DEM+ G++P TY+ LI + ++ EL K+ V G+K
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV-------VGKGMKPD 466
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ L+D C G + F + +E+ ++V Y ++ LC G++ A ++
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EMK+RG P + YN +I G +K GD + TY L++ L
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 337 DVDKAREVLKLMLRKEGV 354
+ + A E+L+ M + EG+
Sbjct: 587 EGELAEELLREM-KSEGI 603
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
++ T +H L N+ A G V D T N+L+ + + +AL
Sbjct: 363 YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
++ G P+ Y L+ C + +A +F + +G P++V TL++G+C++
Sbjct: 423 MMT--DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G + A + EM + P+ +TY+ L+RG+ E E RELM ++ R G+
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR-------GI 533
Query: 216 KV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
K ++ L+ ++G F + +E+ G + Y ++ L K A
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLT 298
++ EMK G VP+D + +I ++
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
Q + + ++ LC N+ EA + F + G PD N L+ + ++L++
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+ + P V Y+ LM C + +A + +MK RG P+ +SY TLI+GY
Sbjct: 492 EMDMM--SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
G A V DEML G P LTY+ L++G+ + ++ E EL+
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 204/507 (40%), Gaps = 78/507 (15%)
Query: 78 ARLLRSRTPLQTWALVRSLI--VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKN 135
+R + ++ + L+ +L+ + GF+P + ++ +D C + A + FF M
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 136 RGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEG 195
RG P+VVSYT LING G + DA ++++ M+ SGV P++ + L+ G+ R ++
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 196 GRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVY 255
E+ +AEE+ VVY
Sbjct: 203 AYEM---------------------------------------VAEEIKSARVKLSTVVY 223
Query: 256 GQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXX 315
+I CK GR A + M K G P V YN +++ + R
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 316 XXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXX 375
++Y L++ C V DK YN ++
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKC------------------YNFMVKE--------- 316
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI 435
+E + DV++ +T+I FC+ + +A ++ ++M K +VV++T++I
Sbjct: 317 --------MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ-KGMVMNVVTYTSLI 367
Query: 436 SGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGI 495
L A L + M E GL P + Y ++ L K + A+GV++ M+ I
Sbjct: 368 KAFLREGNSSVAKKLLDQ-MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH 555
D+ +Y ++ GLC ++ EA + D+ D + I+ GL R + A
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 556 FLYELVDSGVSPNIFSYNILINCACHL 582
+++D G + + + LI +C +
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 185/451 (41%), Gaps = 15/451 (3%)
Query: 100 KP-GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
KP GF Y R + C ++ + DM+ G P++ ++ ++ C +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV- 217
G A + F M++ G EP+ ++Y++LI G+ + + E +W M + SGV
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE----IWNAM---IRSGVSPD 183
Query: 218 -AAFANLVDSLCREGFFNEVFR-IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
A A LV LC + + +AEE+ VVY +I CK GR A +
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
M K G P V YN +++ + R ++Y L++ C V
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
DK + + G Y+ + M + +V+T
Sbjct: 304 SHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 396 NTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
++I F + G+ A K+L M +G +PD + +TT++ L + VD+A+ +F+
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELG--LSPDRIFYTTILDHLCKSGNVDKAYGVFND- 420
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M E+ + P ++YN+LI GL + R +A ++ M D T+ I+ GL +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
+ A W ++ D V ++K C
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 199/485 (41%), Gaps = 16/485 (3%)
Query: 143 VSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK 202
++Y + I G I +A +VFDEM S S Y+ I +++E E +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAI--- 66
Query: 203 LWERMSVEVESGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMID 260
W+ + G + F + + LC+ F+ + + ++ G + + + +D
Sbjct: 67 YWDMKPM----GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLD 122
Query: 261 SLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX 320
LC+ + A + + M +RG P V Y +I+GL + G +
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP 182
Query: 321 CDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXX 379
+ LV LCH VD A E++ ++ V T +YN +
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 380 XXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL 439
M + C D++T N ++N + + A V+ +M+ D S+ ++
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI-QLDAYSYNQLLKRHC 301
Query: 440 DATRVDEAFDLFHRVMPENGLRPC-VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
+ D+ ++ + M G C VV+Y+ LI + A+ ++ M G+ +
Sbjct: 302 RVSHPDKCYNFMVKEMEPRGF--CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
TYT +++ AK + D Y IL LC+SGN ++A
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
++++ ++P+ SYN LI+ C +EA ++ +MK PD +T++ + I G +R
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI--IGGLIR 477
Query: 619 KQTLS 623
+ LS
Sbjct: 478 GKKLS 482
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 185/424 (43%), Gaps = 58/424 (13%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRS---RTPLQTW-ALVRSLI 97
L LC N+ A Q F + G PD + +L+ L R+ ++ W A++RS
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-- 178
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF-DMKNRGHCPNVVSYTTLINGYCSVG 156
G P L+ C R+ A+ + ++K+ + V Y LI+G+C G
Sbjct: 179 ----GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
I A + M + G EP+ +TY+VL+ L+ +M ++ V SG++
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM-------VRSGIQ 287
Query: 217 VAAFA--NLVDSLCREGFFNEVFR-IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ A++ L+ CR ++ + + +E+ +G + V Y +I++ C+ A R
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYR 346
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
+ EM+++G V + V Y +I ++G+ + Y +++ LC
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+VDKA V M+E + D I
Sbjct: 407 KSGNVDKAYGVFN-----------------------------------DMIEHEITPDAI 431
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
+ N++I+G C++G V EA+K+ +DM GK C PD ++F +I GL+ ++ A+ ++ +
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDM-KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 454 VMPE 457
+M +
Sbjct: 491 MMDK 494
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 8/388 (2%)
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
A + Y I +L K G A ++ EM+ + YN I L ++
Sbjct: 7 AVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAI 66
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
TY + LC V D +L M + +N+YL
Sbjct: 67 YWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
M++ DV++ +ING + G V +A+++ M+ +PD
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG-VSPDNK 185
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
+ ++ GL A +VD A+++ + ++ V YNALI G K R A + S
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSG 548
M G D TY +++ D + ++ A+ +++ SGI D + Y +LK CR
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV-RSGIQLDAYSYNQLLKRHCRVS 304
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ ++ +F+ + ++ ++ SY+ LI C +AY++ EM++ G+ + VT+
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 609 ILHKI-----QGKVRKQTLSEYQSLSIN 631
L K V K+ L + L ++
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLS 392
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S ++ L + + ++A + ++ + SG PD++ C L+ L +R + +V
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
I + + ++V Y+ L+ FC R A + M G P++V+Y L+N Y
Sbjct: 211 IKSARVKLSTVV-YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A V EM+ SG++ ++ +Y+ L++ + + M K +E
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK-----EMEPRGFCD 324
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V +++ L+++ CR + +R+ EE+ +G + V Y +I + + G A +++
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+M + G P + Y I+ L K G+ + Y +Y L+ LC
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 337 DVDKAREVLKLMLRKE 352
V +A ++ + M KE
Sbjct: 445 RVTEAIKLFEDMKGKE 460
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 40/418 (9%)
Query: 214 GVKVAAFA--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
G K++A + L+ +L +E +V + +E+ + + +I++LCK G+ + A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
++ +MK G P+ V YN +I G K G + Y
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY------------------------ 278
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
KA VLK M+ + +NI + ML+ + +
Sbjct: 279 --------KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
VI+ N++ING C G + EA+ ++D ++ P+++++ +I+G + EA D+F
Sbjct: 331 VISYNSLINGLCNGGKISEAIS-MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
V + G P YN LI KL + +D F + M +GI D TY ++ GLC
Sbjct: 390 GSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
IE AK + D + G+ D + +++G CR G +A L E+ G+ P +
Sbjct: 449 NGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 572 YNILINCACHL-DLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
YNI++ C +LK+ + K+ L + ++ +L +QG +K L + L
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL--LQGYSQKGKLEDANML 563
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 215/515 (41%), Gaps = 34/515 (6%)
Query: 20 LRFSTTIATPSSPSLQHSIA-TTLHALCDSNRFSEA-------------HQCFSISLASG 65
LR+ + + S S+ + LH+L ++ R+S+ HQ SI A
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI- 143
Query: 66 SVPDHRTCNVLLARLL------RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCV 119
S+ D+ N ++A +L SR L A RS G+ S ++ LM
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRS---GYYGYKLSALSCKPLMIALLK 200
Query: 120 FRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLT 179
R D ++ +M R PNV ++ +IN C G + AR V ++M G PN ++
Sbjct: 201 ENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVS 260
Query: 180 YSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVF 237
Y+ LI G + GG M K + VE+ V + F L+D ++
Sbjct: 261 YNTLIDGYCK----LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGL 297
++ +E+ Q + Y +I+ LC G+ A + +M G P+ + YN +I+G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 298 TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
K+ Y +L++A C + +D + + M R+ V
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
YN L A L S+ D++T + ++ G+C+ G +A +L++
Sbjct: 437 GTYNC-LIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 418 M-LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYK 476
M MG P +++ V+ G + A ++ ++ E LR V +YN L++G +
Sbjct: 496 MSKMG--LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+ DA + + M+ G+ + TY I+ E + D
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 172/421 (40%), Gaps = 47/421 (11%)
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
D V+ EM+ ++PN T++V+I + + + R++M E M V V
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM----EDMKV-YGCSPNVV 259
Query: 219 AFANLVDSLCREGFFNEVFR---IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
++ L+D C+ G ++++ + +E+ + +ID K G+ ++
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM + P+ + YN +I+GL G TY L+ C
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+ +A ++ + + V TR+YN+
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNM--------------------------------- 406
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+I+ +CK G +D+ L++ + + PDV ++ +I+GL ++ A LF ++
Sbjct: 407 --LIDAYCKLGKIDDGF-ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
+ GL P +VT++ L+ G + A + M G+ TY I+++G C +
Sbjct: 464 SK-GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 516 EEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
+ A + + + N Y +L+G + G +A L E+++ G+ PN +Y I
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 575 L 575
+
Sbjct: 582 V 582
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 13/268 (4%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S + ++ LC+ + SEA +++G P+ T N L+ ++ + + S
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS- 391
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
V G VP+ Y+ L+D +C + D + +M+ G P+V +Y LI G C G
Sbjct: 392 -VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
I A+K+FD++ G+ P+ +T+ +L+ G + +G L + MS + G+K
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR----KGESRKAAMLLKEMS---KMGLK 502
Query: 217 VA--AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV-YGQMIDSLCKVGRYHGAAR 273
+ ++ C+EG + ++ + L V Y ++ + G+ A
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
++ EM ++G VP+ + Y + + G
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLM-GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
+ + ++GF + GS + + + M C +++ V++ + +R + F+ F R
Sbjct: 120 IRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLA-YANNSRFELGFEAFKR 178
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
G + ++ L+ L K R D VY M+ I + T+ +++ LC
Sbjct: 179 S-GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 514 QIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCR---SGNFNEACHFLYELVDSGVSPNI 569
++ +A+ D + G N V Y ++ G C+ +G +A L E+V++ VSPN+
Sbjct: 238 KMNKARDVMED-MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
++NILI+ D + ++ +EM + P+ +++ L I G +SE S+
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL--INGLCNGGKISEAISM 353
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 193/464 (41%), Gaps = 17/464 (3%)
Query: 47 DSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPS 106
D+ F E + F + G D R+C V L + R + R ++ G +
Sbjct: 166 DNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV--DSGVKIT 223
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
+ + +++ C + ++ + +G P +Y T+IN Y V
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
M + GV N +TY++L+ ++ + +L ++ ER +ES V V + +L+
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER---GIESDVHV--YTSLISW 338
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
CR+G F + +EL +G YG +ID +CKVG A ++ EM+ +G +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
V++N +I G + G T + + D+A++ L
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 347 LML----RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
M+ + V T + ++Y + M + + IT N +I +
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKE----GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
CK G + EA K+ +M PD ++T++I G A VDEA LF M GL
Sbjct: 515 CKQGKIKEARKLRANMEANGM-DPDSYTYTSLIHGECIADNVDEAMRLFSE-MGLKGLDQ 572
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
VTY +I GL K + ++AFG+Y M G D+ YT ++
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 197/474 (41%), Gaps = 48/474 (10%)
Query: 4 LTFLISLKPKPFIPFSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLA 63
+ FL++ K + I L + +S+ + LC ++ +
Sbjct: 193 IVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV 252
Query: 64 SGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRP 123
G P+ T N ++ ++ R +++ ++ K G V + V Y LM+ +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLK--VMKKDGVVYNKVTYTLLMELSVKNGKM 310
Query: 124 CDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
DA ++F +M+ RG +V YT+LI+ C G + A +FDE+ E G+ P+S TY L
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA--AFANLVDSLCREGFFNEVFRIAE 241
I GV + ++ LM ++ + GV + F L+D CR+G +E I +
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSK-------GVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ +G A+ + ++ RY A + ++ M + G S V Y +I K+G
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
+ + TY V++ A C + +AR+ L+ + G+D
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-LRANMEANGMD------ 536
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
D T ++I+G C +VDEA+++ +M +
Sbjct: 537 ----------------------------PDSYTYTSLIHGECIADNVDEAMRLFSEMGL- 567
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
K + V++T +ISGL A + DEAF L+ M G Y ALI ++
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE-MKRKGYTIDNKVYTALIGSMH 620
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 195/450 (43%), Gaps = 46/450 (10%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
IF M + G V S T ++ G C G + ++K+ E G++P + TY+ +I +
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
++RD G VE +KV + G
Sbjct: 271 KQRDFSG---------------VEGVLKV-------------------------MKKDGV 290
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDV-LYNYIIHGLTKDGDCMRGY 307
+ +V Y +++ K G+ A ++ EM++RG + SDV +Y +I + G+ R +
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG-IESDVHVYTSLISWNCRKGNMKRAF 349
Query: 308 QXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRA 366
+TY L++ +C V ++ A E+L ++ +GV+ T++ +N +
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA-EILMNEMQSKGVNITQVVFNTLIDG 408
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
M + +ADV T NT+ + F + DEA + L M+ G
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG-VKL 467
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
VS+T +I V+EA LF M G++P +TYN +I K + +A +
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVE-MSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
++M ++G+ DS TYT ++ G C D ++EA + ++ ++ Y ++ GL +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+G +EA E+ G + + Y LI
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 193/462 (41%), Gaps = 48/462 (10%)
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
Y G + +VFD M++ G+ + + V + + R ++ L +++ RM V
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRID----LCLEIFRRM---V 216
Query: 212 ESGVKVAAFA--NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYH 269
+SGVK+ ++ +V+ LCR G + ++ +E +G E Y +I++ K +
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 270 GAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLV 329
G ++ MKK G V + V Y ++ K+G + H Y L+
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 330 EALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCR 389
C ++ +A +L E + E
Sbjct: 337 SWNCRKGNMKRA-----FLLFDE------------------------------LTEKGLS 361
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
T +I+G CK G + A ++L + + K V F T+I G VDEA
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAA-EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA-S 419
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
+ + VM + G + V T N + +LKR ++A M+ G+ + +YT +++
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
C +EEAK + + + G+ N + Y ++ C+ G EA + +G+ P+
Sbjct: 480 CKEGNVEEAKRLFVE-MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++Y LI+ C D EA ++ EM GL+ + VT+ ++
Sbjct: 539 SYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 224/579 (38%), Gaps = 111/579 (19%)
Query: 38 IATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTC-NVLLARLLRSRTPLQTWALVRSL 96
+++ L C FSEA+ F ++ R C NV L + + L R +
Sbjct: 364 VSSILQCYCQMGNFSEAYDLFK-EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
G P ++NY L+ C+ + DA + +M G P++V Y L G + G
Sbjct: 423 --TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG 480
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+A + M GV+P +T++++I G++ +L+ E + E S E +
Sbjct: 481 LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESLEHKSREND---- 535
Query: 217 VAAFANLVDSLCREGFFNEVFR--IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR- 273
A++V C G + F I E P S VY + SLC Y A+
Sbjct: 536 ----ASMVKGFCAAGCLDHAFERFIRLEFPLPKS-----VYFTLFTSLCAEKDYISKAQD 586
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
++ M K G P +Y L+ A C
Sbjct: 587 LLDRMWKLGVEPEKSMYGK-----------------------------------LIGAWC 611
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
V +V KARE ++++ K+ V D+
Sbjct: 612 RVNNVRKAREFFEILVTKKIV-----------------------------------PDLF 636
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG--LLDATRVDEAFDLF 451
T +IN +C+ +A + +DM + PDVV+++ +++ LD R EAFD+
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDM-KRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVI 695
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
P VV Y +I L + ++ M I D TYT++++ +
Sbjct: 696 ----------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ E K+F DV D F Y ++ C+ G+ EA ++++SGV P+
Sbjct: 746 RNLSREMKAF--DV-----KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
Y LI C C + EA I M ++G+ PD V + L
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 208/509 (40%), Gaps = 44/509 (8%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G P++ + LI+ + G F E+ G++ ++ TY ++++ + + D
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDD---- 232
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE---- 252
+E + KL R+ + E+ + N ++ LC + + + + L L ++
Sbjct: 233 KEELEKLLSRLLIS-ETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLG 291
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
+ Y +++ LC R A +V +M+K G P +Y+ II G K+ + +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXX 371
+++ C + + +A ++ K R+ + R+ YN+ A
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFK-EFRETNISLDRVCYNVAFDALGKLG 410
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M DVI T+I G C G +A ++ +M G PD+V +
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM-DGTGKTPDIVIY 469
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+ GL EAF+ ++M G++P VT+N +I GL + A Y S+
Sbjct: 470 NVLAGGLATNGLAQEAFETL-KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 492 SDGIGADST----------------------------TYTIIVEGLC-DCDQIEEAKSFW 522
D++ Y + LC + D I +A+
Sbjct: 529 HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 523 HDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
D +W G+ + +Y ++ CR N +A F LV + P++F+Y I+IN C
Sbjct: 589 -DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L+ +AY + +MK+ + PD VT+ +L
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVL 676
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 120/590 (20%), Positives = 220/590 (37%), Gaps = 92/590 (15%)
Query: 52 SEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYH 111
++AH + A D LL+RLL S T R+ V F+ L +
Sbjct: 215 ADAHTYVLVVQALWRNDDKEELEKLLSRLLISET--------RNPCVFYLNFIEGLC-LN 265
Query: 112 RLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES 171
++ D +P I D + G ++Y ++ G C I DA V +M +
Sbjct: 266 QMTDIAYFLLQPLRDANILVDKSDLG-----IAYRKVVRGLCYEMRIEDAESVVLDMEKH 320
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
G++P+ YS +I G + ++ ++ K+ ++ + ++++ C+ G
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK-----RKRINCVIVSSILQCYCQMG 375
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
F+E + + +E + V Y D+L K+G+ A + EM +G P + Y
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G G C + Y VL L +A E LK+M
Sbjct: 436 TLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM-EN 494
Query: 352 EGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDE 410
GV T + +N+ + S LE + R + ++ + GFC G +D
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYES-LEHKSRENDASM---VKGFCAAGCLDH 550
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
A + + +F P V FT S + + +A DL R
Sbjct: 551 AF---ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR----------------- 590
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG 530
++KL G+ + + Y ++ C + + +A+ F+ ++
Sbjct: 591 ---MWKL----------------GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 531 IHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSE--- 587
+ D F Y ++ CR +A ++ V P++ +Y++L+N LD+K E
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEA 691
Query: 588 -------------------------AYQIVREMKKNGLNPDCVTWRILHK 612
Y + ++MK+ + PD VT+ +L K
Sbjct: 692 FDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P + Y L+D C +A RIF M G P+ YT LI C +G + +A+ +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 165 FDEMLESGVEPNSLTYSVLIRG 186
FD M+ESGV+P+ + Y+ LI G
Sbjct: 819 FDRMIESGVKPDVVPYTALIAG 840
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
T ++ + DEA D+F R G P + N LI + R + G + +
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
G+ AD+ TY ++V+ L D EE + ++ + Y ++GLC + +
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTD 269
Query: 552 EACHFLYELVDSGV----SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
A L L D+ + S +Y ++ C+ +A +V +M+K+G++PD +
Sbjct: 270 IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 20/240 (8%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA-------PDVVSFTTVISGLLDATR 443
D+ LN +I+ +G DM++G F D ++ V+ L
Sbjct: 181 DIKALNFLISRMIASGR--------SDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDD 232
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST--- 500
+E L R++ PCV N I GL + + A+ + + I D +
Sbjct: 233 KEELEKLLSRLLISETRNPCVFYLN-FIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLG 291
Query: 501 -TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYE 559
Y +V GLC +IE+A+S D+ D +VY+AI++G ++ N +A +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
++ N + ++ C C + SEAY + +E ++ ++ D V + + GK+ K
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 46/358 (12%)
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
M G P+VV++TTL+NG C G + A + D M+E G +P Y +I G+ + D
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
E L+ K+ E V + ++D LC++G + E+ +G +
Sbjct: 57 TESALNLLSKME-----ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
+ Y MIDS C+ GR+ A +++ +M +R P V ++ +I+ L K+G
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG----------- 160
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
V +A E+ MLR+ T YN +
Sbjct: 161 ------------------------KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
SM C DV+T +T+ING+CK VD +++ +M A + V++T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA-NTVTYT 255
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
T+I G +D A DL + VM +G+ P +T+ +++ L K AF + +
Sbjct: 256 TLIHGFCQVGDLDAAQDLLN-VMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 48/366 (13%)
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC-KLWERMSVEVESGVKVAAFANLVDS 226
M+E+G P+ +T++ L+ G+ E GR L L +RM VE G + + +++
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCE-----GRVLQALALVDRM---VEEGHQ--PYGTIING 50
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
LC+ G + ++ A V+Y +ID LCK G + A + EM +G P
Sbjct: 51 LCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPD 110
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
+ Y+ +I + G Q T+ L+ AL V +A E+
Sbjct: 111 VITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
MLR+ G+ T IT N++I+GFCK
Sbjct: 171 DMLRR-GIFPT----------------------------------TITYNSMIDGFCKQD 195
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
+++A ++L D + K C+PDVV+F+T+I+G A RVD ++F M G+ VT
Sbjct: 196 RLNDAKRML-DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE-MHRRGIVANTVT 253
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
Y LI G ++ + A + + M+S G+ + T+ ++ LC ++ +A + D+
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Query: 527 WPSGIH 532
G H
Sbjct: 314 KSEGHH 319
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 146/321 (45%), Gaps = 6/321 (1%)
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M + G P V + +++GL +G ++ Y ++ LC + D
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ A +L M IYN + M + DVIT +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+ FC++G +A ++L+DM+ + PDVV+F+ +I+ L+ +V EA +++ M
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQI-NPDVVTFSALINALVKEGKVSEAEEIYGD-MLR 174
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
G+ P +TYN++I G K R NDA + SM S D T++ ++ G C +++
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ ++ + + Y ++ G C+ G+ + A L ++ SGV+PN ++ ++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 578 CACHLDLKSEAYQIVREMKKN 598
C +A+ I+ +++K+
Sbjct: 295 SLCSKKELRKAFAILEDLQKS 315
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 9/249 (3%)
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
+V Y+ ++D+ C A +F +M ++G P+V++Y+ +I+ +C G DA ++
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLV 224
+M+E + P+ +T+S LI +++E + E+ + R G+ + +++
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-------GIFPTTITYNSMI 188
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
D C++ N+ R+ + + + + V + +I+ CK R I EM +RG V
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
+ V Y +IHG + GD T++ ++ +LC ++ KA +
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 345 LKLMLRKEG 353
L+ + + EG
Sbjct: 309 LEDLQKSEG 317
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ + C S R+++A Q + PD T + L+ L++ + + ++ +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML--RR 175
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+ + Y+ ++D FC R DA R+ M ++ P+VV+++TLINGYC + +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAA 219
++F EM G+ N++TY+ LI G Q DL+ ++L ++V + SGV
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL-------LNVMISSGVAPNYIT 288
Query: 220 FANLVDSLCREGFFNEVFRIAEEL 243
F +++ SLC + + F I E+L
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDL 312
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E+ +A V+ N +I+ CK G A + +M K PDV++++ +I +
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMIDSFCRSG 125
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
R +A L R M E + P VVT++ALI L K + ++A +Y M+ GI + TY
Sbjct: 126 RWTDAEQLL-RDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+++G C D++ +AK + S D ++ ++ G C++ + E+
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
G+ N +Y LI+ C + A ++ M +G+ P+ +T++
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 41/280 (14%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M+E+ CR DV+T T++NG C G V +AL L D ++ + P + T+I+GL
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQAL-ALVDRMVEEGHQP----YGTIINGLCKMG 55
Query: 443 RVDEAFDLFHRV----------------------------------MPENGLRPCVVTYN 468
+ A +L ++ M + G+ P V+TY+
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
+I + R DA + M+ I D T++ ++ L ++ EA+ + D++
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
Y +++ G C+ N+A L + SP++ +++ LIN C
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 589 YQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+I EM + G+ + VT+ L I G + L Q L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTL--IHGFCQVGDLDAAQDL 273
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 173/419 (41%), Gaps = 46/419 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+L Y+ LM+ A R+F M++ P++V+Y T+I GYC G A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA--A 219
+ +M G E + +TY +I+ + D L++ M E G++V A
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGS----CVALYQEMD---EKGIQVPPHA 329
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F+ ++ LC+EG NE + + E + +GS +Y +ID K G A R+++ M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
GF P V Y+ +++GL K+G Y L++ L VD
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A + + M E C D N +I
Sbjct: 450 EAERLFE-----------------------------------EMSEKGCTRDSYCYNALI 474
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+ F K VDEA+ + + M + C V ++T ++SG+ R +EA L+ +M + G
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD-MMIDKG 533
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
+ P + AL GL + A + + G+ D+ +I LC +I+EA
Sbjct: 534 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEA 591
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 198/485 (40%), Gaps = 59/485 (12%)
Query: 125 DAHRIFF---DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
D RI F ++K V + LI + +G + + V+ +M E+G+EP TY+
Sbjct: 167 DVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYN 226
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
L+ G++ A VDS R VF + E
Sbjct: 227 FLMNGLVS-------------------------------AMFVDSAER------VFEVME 249
Query: 242 ELPCQGSLAEEVV-YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
G + ++V Y MI CK G+ A + +M+ RG + Y +I D
Sbjct: 250 ----SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 301 GD---CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
D C+ YQ H + +++ LC +++ V + M+RK
Sbjct: 306 SDFGSCVALYQEMDEKGIQVP---PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
IY + + M++ + DV+T + V+NG CK G V+EAL
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
A + + ++++I GL A RVDEA LF M E G YNALI K
Sbjct: 423 CRFDGL-AINSMFYSSLIDGLGKAGRVDEAERLFEE-MSEKGCTRDSYCYNALIDAFTKH 480
Query: 478 KRPNDAFGVYSSMVSDGIGADST--TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF 535
++ ++A ++ M + G D T TYTI++ G+ + EEA W D++ GI
Sbjct: 481 RKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFKEHRNEEALKLW-DMMIDKGITPTA 538
Query: 536 V-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
+ A+ GLC SG AC L EL GV + + +IN C EA ++
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADG 597
Query: 595 MKKNG 599
+ + G
Sbjct: 598 ITERG 602
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 349 LRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
+++ G++ T YN + M + + D++T NT+I G+CK G
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 408 VDEALKVLQDM-------------LMGKFCAPDVV---------------------SFTT 433
+A++ L+DM M + C D +F+
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
VI GL +++E + +F M G +P V Y LI G K DA + M+ +
Sbjct: 333 VIGGLCKEGKLNEGYTVFEN-MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
G D TY+++V GLC ++EEA ++H + ++ Y++++ GL ++G +EA
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM-KKNGLNPDCVTWRIL 610
E+ + G + + + YN LI+ EA + + M ++ G + T+ IL
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 81/224 (36%), Gaps = 35/224 (15%)
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
KF P VS + + E R M ENG+ P + TYN L+ GL +
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAIL 541
A V+ M S I D TY +++G C Q ++A D+ D Y ++
Sbjct: 240 SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 542 K-----------------------------------GLCRSGNFNEACHFLYELVDSGVS 566
+ GLC+ G NE ++ G
Sbjct: 300 QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSK 359
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
PN+ Y +LI+ +A +++ M G PD VT+ ++
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ G P++ Y L+D + DA R+ M + G P+VV+Y+ ++NG C G +
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A F G+ NS+ YS LI G+ + ++ +L+E MS E G +
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE----RLFEEMS---EKGCTRDS 467
Query: 220 FA--NLVDSLCREGFFNEVF----RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ L+D+ + +E R+ EE C ++ Y ++ + K R A +
Sbjct: 468 YCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV---YTYTILLSGMFKEHRNEEALK 524
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
+ M +G P+ + + GL G R
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 161/362 (44%), Gaps = 37/362 (10%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLAS-GSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
S+ T L+ L + RF H F S S G P+ TCN+L+ L + + ++
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+ G VP+LV Y ++ + A R+ +M +RG P+ +YT L++GYC
Sbjct: 216 E--IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM-------------- 200
+G +A V D+M ++ +EPN +TY V+IR + +E+ R +
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 201 -----------------CKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
C LW +M ++ A + L+ LC+EG E ++ +E
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKM-LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+GS+ + Y +I +C+ G A R+ +M +R P+ YN +I GL+K+G+
Sbjct: 393 E-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
G + T+ +L E L + + A +++ + + VDK + ++
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKES-WELF 510
Query: 364 LR 365
L+
Sbjct: 511 LK 512
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 196/528 (37%), Gaps = 83/528 (15%)
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVS---YTTLINGYCSV 155
+ PGF + YH ++ + R + D++N + P + L+ Y
Sbjct: 75 SHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN-SYPPIKCGENLFIDLLRNYGLA 133
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G + ++F + + GV+ + + + L+ ++Q + + L+ +++
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFD----LVHAMFKNSKESFGITP 189
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ LV +LC++ +++ +E+P G + V Y ++ G A R++
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM RG+ P TY VL++ C +
Sbjct: 250 EEMLDRGWYPDAT-----------------------------------TYTVLMDGYCKL 274
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+A V+ M + E Y + +RA MLE D
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
VI+ C+ VDEA + + ML C PD +T+I L RV EA LF
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNN-CMPDNALLSTLIHWLCKEGRVTEARKLFDEF- 392
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
E G P ++TYN LI G+C+ ++
Sbjct: 393 -EKGSIPSLLTYNTLI-----------------------------------AGMCEKGEL 416
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
EA W D+ + F Y +++GL ++GN E L E+++ G PN ++ IL
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLIL 476
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI-LHKIQGKVRKQTL 622
L + +A +IV NG D +W + L K G++ K L
Sbjct: 477 FEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFAGELDKGVL 523
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
++ T N ++ CK ++ A KVL ++ MG P++V++TT++ G + ++ A
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMG--LVPNLVTYTTILGGYVARGDMESAKR 247
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
+ ++ + G P TY L+ G KL R ++A V M + I + TY +++ L
Sbjct: 248 VLEEML-DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
C + EA++ + +++ S + D+ + ++ LC +EAC +++ + P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
+ LI+ C +EA ++ E +K + P +T+ L I G K L+E
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTL--IAGMCEKGELTE 418
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 177/396 (44%), Gaps = 39/396 (9%)
Query: 203 LWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL 262
+ + M + +E + A+ +LV+ C + +A ++ G + VV +ID+L
Sbjct: 1 MLKMMKLGIEPDIVTAS--SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 58
Query: 263 CKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD 322
CK A ++ MK RG P+ V Y+ +I GL K G +
Sbjct: 59 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
T+ L++A + K V K+M+
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMI--------------------------------- 145
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
+ +V T +++I G C VDEA+K+L D+++ K C P+VV+++T+ +G ++
Sbjct: 146 --QMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGCTPNVVTYSTLANGFFKSS 202
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
RVD+ L MP+ G+ V+ N LI+G ++ + + A GV+ M S+G+ + +Y
Sbjct: 203 RVDDGIKLLDD-MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++ GL ++E+A S + + D Y ++ G+C++ EA Y+L
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
V P+ +Y I+I +++EA + R +K+
Sbjct: 322 KRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 42/387 (10%)
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
+M++ G+EP+ +T S L+ G ++ + ++ E+M ++ + V L+D+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMGIKRDVVVDTI----LIDT 57
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
LC+ + + + +G V Y +I LCK GR A R ++EM + P+
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
+ ++ +I K G + TY L+ LC VD+A ++L
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
LM+ K C +V+T +T+ NGF K+
Sbjct: 178 LMISK-----------------------------------GCTPNVVTYSTLANGFFKSS 202
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
VD+ +K+L DM + A + VS T+I G A ++D A +F M NGL P + +
Sbjct: 203 RVDDGIKLLDDMPQ-RGVAANTVSCNTLIKGYFQAGKIDLALGVFG-YMTSNGLIPNIRS 260
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
YN ++ GL+ A + M D TYTI++ G+C ++EA ++ +
Sbjct: 261 YNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLK 320
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEA 553
+ D Y ++ L R+G EA
Sbjct: 321 FKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLDA 441
M++ D++T ++++NGFC + S+ +A+ V M MG DVV T +I L
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMG--IKRDVVVDTILIDTLCKN 61
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
V A ++ R M + G+ P VVTY++LI GL K R DA M S I + T
Sbjct: 62 RLVVPALEVLKR-MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
++ +++ ++ + S + +I S + F Y++++ GLC +EA L ++
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
G +PN+ +Y+ L N + +++ +M + G+ + V+ L K
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 151/375 (40%), Gaps = 11/375 (2%)
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
L + K G P +V L++ FC+ DA + M+ G +VV T LI+ C
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
+ A +V M + G+ PN +TYS LI G+ + L +L E S ++
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAER---RLHEMDSKKINPN- 117
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHGAARI 274
V F+ L+D+ + G ++V + + + Q S+ V Y +I LC R A ++
Sbjct: 118 -VITFSALIDAYAKRGKLSKVDSVYKMM-IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ M +G P+ V Y+ + +G K G + + L++
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+D A V M + R YNI L M +++ D+IT
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA---TRVDEAFDLF 451
+I+G CK V EA + L K PD ++T +I+ L A T D +
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYK-LKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFY 354
Query: 452 HRVMPENGLRPCVVT 466
+ + +N P V+
Sbjct: 355 QKHVRQNESAPAEVS 369
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 128/307 (41%), Gaps = 7/307 (2%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
++ ++ C SN +A G D +L+ L ++R + +++ +
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM-- 74
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
G P++V Y L+ C R DA R +M ++ PNV++++ LI+ Y G +
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
V+ M++ ++PN TYS LI G+ ++ +++ + + V
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP-----NVV 189
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
++ L + + ++ ++ +++P +G A V +I + G+ A + M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
G +P+ YN ++ GL +G+ + TY +++ +C V
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 339 DKAREVL 345
+A ++
Sbjct: 310 KEAYDLF 316
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 199/474 (41%), Gaps = 7/474 (1%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G PS Y+ ++D A+ F M++ G P+ +Y LI+G C G + +A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++ +M + G PN TY++LI G L + G + K E M V + A
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFL----IAGRVDEALKQLEMMRVR-KLNPNEATIR 289
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
V + R + F + + S + V Y ++ L + + ++ +R
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G++P +N + L K D + + + Y VLV+AL + +
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
LK M + YN + M + +++T NT ++G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+ G V + VL+ +L+ F PDV++F+ +I+ L A + +AFD F + M E G+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGF-KPDVITFSLIINCLCRAKEIKDAFDCF-KEMLEWGIE 527
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P +TYN LIR + + +++ M +G+ D Y ++ C ++++A+
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
++ DNF Y+ ++K L SG +EA + G P+ ++ ++
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 160/402 (39%), Gaps = 2/402 (0%)
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
++D+L + + + +++ G + Y +I +CK G A R+V +M++ G
Sbjct: 186 VIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEG 245
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
P+ Y +I G G + + T + V + KA
Sbjct: 246 NRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAF 305
Query: 343 EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
EVL + K+ + Y+ L + E D T N ++
Sbjct: 306 EVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCL 365
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
K + E ++ D + + P + ++ LL+A R E D + + M +GL
Sbjct: 366 LKGHDLVETCRIF-DGFVSRGVKPGFNGYLVLVQALLNAQRFSEG-DRYLKQMGVDGLLS 423
Query: 463 CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFW 522
V +YNA+I L K +R +A + M GI + T+ + G +++
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 523 HDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL 582
++ D ++ I+ LCR+ +A E+++ G+ PN +YNILI C
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 583 DLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
+ ++ +MK+NGL+PD + + K+RK +E
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 183/451 (40%), Gaps = 49/451 (10%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ AL SN A+ F + G PD T N+L+ + + + LV+ + +
Sbjct: 187 IDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM--EQE 244
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING---------- 151
G P++ Y L+D F + R +A + M+ R PN + T ++G
Sbjct: 245 GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKA 304
Query: 152 -----------------------YCSVGG--IGDARKVFDEMLESGVEPNSLTYSVLIRG 186
YC + + ++ E G P+S T++ +
Sbjct: 305 FEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSC 364
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVA--AFANLVDSLCREGFFNEVFRIAEELP 244
+L+ DL C++++ V GVK + LV +L F+E R +++
Sbjct: 365 LLKGHDLVE----TCRIFDGF---VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
G L+ Y +ID LCK R AA + EM+ RG P+ V +N + G + GD
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIY 363
+ + T+ +++ LC ++ A + K ML + G++ I YNI
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML-EWGIEPNEITYNIL 536
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+R+ M E+ D+ N I FCK V +A ++L+ ML
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
PD +++T+I L ++ R EA ++F +
Sbjct: 597 -KPDNFTYSTLIKALSESGRESEAREMFSSI 626
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/508 (17%), Positives = 194/508 (38%), Gaps = 46/508 (9%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F + G P+ Y +I+ + A F +M G +P+ TY++LI GV
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV- 225
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
C++G +E R+ +++ +G+
Sbjct: 226 ---------------------------------------CKKGVVDEAIRLVKQMEQEGN 246
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
Y +ID GR A + + M+ R P++ +HG+ + + ++
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
Y ++ L + + + L+ + + + + +N +
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
+ + ++ E + L+ M + + V
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLS-SV 425
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
S+ VI L A R++ A +F M + G+ P +VT+N + G GV
Sbjct: 426 YSYNAVIDCLCKARRIENA-AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI-WPSGIHDN-FVYAAILKGLCR 546
++ G D T+++I+ LC +I++A + +++ W GI N Y +++ C
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW--GIEPNEITYNILIRSCCS 542
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+G+ + + ++ ++G+SP++++YN I C + +A ++++ M + GL PD T
Sbjct: 543 TGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFT 602
Query: 607 WRILHKIQGKVRKQTLSEYQSLSINYEG 634
+ L K + +++ + SI G
Sbjct: 603 YSTLIKALSESGRESEAREMFSSIERHG 630
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ AL ++ RFSE + G + + N ++ L ++R ++ A+ + + +
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR-IENAAMFLTEMQDR- 454
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+LV ++ + + V H + + G P+V++++ +IN C I DA
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
F EMLE G+EPN +TY++LIR D + +L K+ E+G+ + A
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM-------KENGLSPDLYA 567
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ + S C+ + + + + G + Y +I +L + GR A + ++
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
Query: 280 KRGFVP 285
+ G VP
Sbjct: 628 RHGCVP 633
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/625 (21%), Positives = 241/625 (38%), Gaps = 60/625 (9%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
+S + + A +S R+ EA F G P T NV+L + TP W + S
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP---WNKITS 265
Query: 96 LI-------------------------------------VAKPGFVPSLVNYHRLMDQFC 118
L+ + GF V Y+ L+D +
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 119 VFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSL 178
RP +A ++ +M G P++V+Y +LI+ Y G + +A ++ ++M E G +P+
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 179 TYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEV 236
TY+ L+ G ER G E ++E M +G K + F + G F E+
Sbjct: 386 TYTTLLSGF--ER--AGKVESAMSIFEEMR---NAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 237 FRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHG 296
+I +E+ G + V + ++ + G + + EMK+ GFVP +N +I
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 297 LTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK 356
++ G + TY ++ AL +++ +VL M
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 357 TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQ 416
Y L A + + L T++ K + EA +
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 417 DMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYK 476
++ F +PD+ + +++S V +A + M E G P + TYN+L +Y
Sbjct: 619 ELKERGF-SPDITTLNSMVSIYGRRQMVAKANGVLD-YMKERGFTPSMATYNSL---MYM 673
Query: 477 LKRPNDAFG----VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIH 532
R D FG + +++ GI D +Y ++ C ++ +A + ++ +
Sbjct: 674 HSRSAD-FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 533 DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
D Y + F EA + ++ G PN +YN +++ C L+ K EA V
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 593 REMKK-NGLNPDCVTWRILHKIQGK 616
+++ + P R+L +I K
Sbjct: 793 EDLRNLDPHAPKGEDLRLLERIVKK 817
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 200/512 (39%), Gaps = 61/512 (11%)
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
R A +F ++ G +V SYT+LI+ + + G +A VF +M E G +P +TY+
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVES----GVKVAAFA-NLVDSLCREG-FFNE 235
V++ + M W +++ VE G+ A+ N + + C+ G E
Sbjct: 248 VILNVFGK----------MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
++ EE+ G ++V Y ++D K R A +++ EM GF PS V YN +I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
+DG +D+A E+ M K
Sbjct: 358 AYARDG-----------------------------------MLDEAMELKNQMAEKGTKP 382
Query: 356 KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVL 415
Y L M + C+ ++ T N I + G E +K+
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 416 QDMLMGKFC--APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
++ C +PD+V++ T+++ + +D + M G P T+N LI
Sbjct: 443 DEI---NVCGLSPDIVTWNTLLA-VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
+ A VY M+ G+ D +TY ++ L E+++ ++ +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGV-SPNIFSYNILINCACHLDLKSEAYQIV 592
Y ++L +G H L E V SGV P L+ DL EA +
Sbjct: 559 ELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 593 REMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
E+K+ G +PD T + I G R+Q +++
Sbjct: 618 SELKERGFSPDITTLNSMVSIYG--RRQMVAK 647
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 8/260 (3%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
MLE D+ T NT++NG+CK G V EA K L+ C PD ++T+ I+G
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEA-KQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
VD AF +F + M +NG V+Y LI GL++ K+ ++A + M D + TY
Sbjct: 205 EVDAAFKVF-KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELV 561
T++++ LC Q EA + + + SGI D+ +Y +++ C +EA L ++
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQ-MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
++G+ PN+ +YN LI C ++ +A ++ +M + L PD +T+ L I G+
Sbjct: 323 ENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTL--IAGQCSSGN 379
Query: 622 L-SEYQSLSINYEGQDMDNK 640
L S Y+ LS+ E + N+
Sbjct: 380 LDSAYRLLSLMEESGLVPNQ 399
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 4/225 (1%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
N +++ + G V+E ++ +ML +PD+ +F T+++G V EA + +
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEML-EDLVSPDIYTFNTLVNGYCKLGYVVEA-KQYVTWL 181
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
+ G P TY + I G + K + AF V+ M +G + +YT ++ GL + +I
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+EA S + + + Y ++ LC SG +EA + ++ +SG+ P+ Y +L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQ 620
I C D EA ++ M +NGL P+ +T+ L I+G +K
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL--IKGFCKKN 344
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 138/353 (39%), Gaps = 78/353 (22%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y+ L+ F + R++ +M P++ ++ TL+NGYC +G + +A++ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
++G +P+ TY+ I G CR
Sbjct: 183 QAGCDPDYFTYTSFITG----------------------------------------HCR 202
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
+ F++ +E+ G EV Y Q+I L + + A ++ +MK P+
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
Y +I L G D Y VL+++ C +D+A +L+
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE--- 319
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
MLE+ +VIT N +I GFCK +V
Sbjct: 320 --------------------------------HMLENGLMPNVITYNALIKGFCKK-NVH 346
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
+A+ +L ML PD++++ T+I+G + +D A+ L +M E+GL P
Sbjct: 347 KAMGLLSKMLEQNL-VPDLITYNTLIAGQCSSGNLDSAYRLL-SLMEESGLVP 397
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 31 SPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTW 90
SP + ++ T ++ C EA Q + + +G PD+ T + R + +
Sbjct: 152 SPDI-YTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAF 210
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
+ + + + G + V+Y +L+ ++ +A + MK+ CPNV +YT LI+
Sbjct: 211 KVFKEM--TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
C G +A +F +M ESG++P+ Y+VLI+ L+ L+ E M
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL----EHM--- 321
Query: 211 VESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRY 268
+E+G+ V + L+ C++ + +++ L Q + + + Y +I C G
Sbjct: 322 LENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLE-QNLVPDLITYNTLIAGQCSSGNL 380
Query: 269 HGAARIVYEMKKRGFVPS 286
A R++ M++ G VP+
Sbjct: 381 DSAYRLLSLMEESGLVPN 398
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ ++S L V+E L+ ++ E+ + P + T+N L+ G KL +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEML-EDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGN 549
+ G D TYT + G C +++ A + ++ +G H N V Y ++ GL +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ-NGCHRNEVSYTQLIYGLFEAKK 240
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+EA L ++ D PN+ +Y +LI+ C KSEA + ++M ++G+ PD + +
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 610 LHKIQGKVRKQTLSEYQSL 628
L IQ TL E L
Sbjct: 301 L--IQSFCSGDTLDEASGL 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P + ++ L++ +C +A + + G P+ +YT+ I G+C + A KV
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK---------------------- 202
F EM ++G N ++Y+ LI G+ + + ++ L+ K
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 203 ---------LWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
L+++MS ESG+K + L+ S C +E + E + G +
Sbjct: 273 SGQKSEAMNLFKQMS---ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+ Y +I CK H A ++ +M ++ VP + YN +I G G+ Y+
Sbjct: 330 VITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYR 385
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ ALC S + SEA F SG PD VL+ T + L+ ++ +
Sbjct: 267 IDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML--EN 324
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P+++ Y+ L+ FC + A + M + P++++Y TLI G CS G + A
Sbjct: 325 GLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 162 RKVFDEMLESGVEPNSLT 179
++ M ESG+ PN T
Sbjct: 384 YRLLSLMEESGLVPNQRT 401
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 161/389 (41%), Gaps = 13/389 (3%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G P + C VLL L++ R W + + ++ K G V ++ Y+ L+ P
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV--KLGVVANIHVYNVLVHACSKSGDPE 220
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A ++ +M+ +G P++ +Y TLI+ YC +A V D M SGV PN +TY+ I
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEE 242
G RE + R+ E++ V + L+D CR +E R+ E
Sbjct: 281 HGF--------SREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ +G V Y ++ LC+ GR A R++ EM + P ++ N +I+ K D
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
+ + ++YK L+ C V +++ A+E L M+ K Y+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
+ + ADV +I CK VD A KVL + + K
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA-KVLFESMEKK 511
Query: 423 FCAPDVVSFTTVISGLLDATRVDEAFDLF 451
D V FTT+ +V EA LF
Sbjct: 512 GLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 14/412 (3%)
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
++ L+ Y G I D+ VF+++ G++P+ +VL+ ++++R L +W
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQR-------LTDTVW 188
Query: 205 ERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL 262
+ V+ GV + + LV + + G + ++ E+ +G + Y +I
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 263 CKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD 322
CK + A + M++ G P+ V YN IHG +++G MR
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR-MREATRLFREIKDDVTANH 307
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
TY L++ C + D+D+A + ++M + YN LR
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M + D IT NT+IN +CK + A+KV + M+ D+ S+ +I G
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL-KLDMYSYKALIHGFCKVL 426
Query: 443 RVDEAFD-LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
++ A + LF M E G P TY+ L+ G Y + ++ + G+ AD
Sbjct: 427 ELENAKEELFS--MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
Y ++ +C +Q++ AK + + + D+ ++ + R+G EA
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 5/287 (1%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
H Y VLV A D +KA ++L M K YN +
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M S +++T N+ I+GF + G + EA ++ +++ + V++TT+I G
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMN 321
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+DEA L VM G P VVTYN+++R L + R +A + + M I D+ T
Sbjct: 322 DIDEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITC 380
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELV 561
++ C + + A +I SG+ D + Y A++ G C+ A L+ ++
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMI-ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ G SP +Y+ L++ + + + E +++ E +K GL D +R
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 5/222 (2%)
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
A++ N +++ K+G ++A K+L +M K PD+ ++ T+IS + EA
Sbjct: 201 ANIHVYNVLVHACSKSGDPEKAEKLLSEM-EEKGVFPDIFTYNTLISVYCKKSMHFEALS 259
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
+ R M +G+ P +VTYN+ I G + R +A ++ + D + A+ TYT +++G
Sbjct: 260 VQDR-MERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGY 317
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
C + I+EA +V+ G V Y +IL+ LC G EA L E+ + P+
Sbjct: 318 CRMNDIDEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ N LIN C ++ A ++ ++M ++GL D +++ L
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 172/434 (39%), Gaps = 20/434 (4%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F+ L+ + G N+ + E++ G +++SL K +I +M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
K G V + +YN ++H +K GD + + TY L+ C
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A V M R YN ++ ++ A+ +T T+I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLI 314
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G+C+ +DEAL+ L++++ + +P VV++ +++ L + R+ EA L M
Sbjct: 315 DGYCRMNDIDEALR-LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE-MSGKK 372
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+ P +T N LI K++ A V M+ G+ D +Y ++ G C ++E AK
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+I Y+ ++ G +E L E G+ ++ Y LI
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRIL---HKIQGKVRKQT--------------L 622
C L+ A + M+K GL D V + + + GKV + + L
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNL 552
Query: 623 SEYQSLSINYEGQD 636
Y+S+S +Y G +
Sbjct: 553 KLYKSISASYAGDN 566
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 12/262 (4%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H R EA + F + +H T L+ R + AL ++
Sbjct: 280 IHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDE--ALRLREVMESR 336
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF P +V Y+ ++ + C R +A+R+ +M + P+ ++ TLIN YC + + A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
KV +M+ESG++ + +Y LI G + +LE +E + + +E G A
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM-------IEKGFSPGYAT 449
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
++ LVD + +E+ ++ EE +G A+ +Y +I +CK+ + A + M+
Sbjct: 450 YSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESME 509
Query: 280 KRGFVPSDVLYNYIIHGLTKDG 301
K+G V V++ + + + G
Sbjct: 510 KKGLVGDSVIFTTMAYAYWRTG 531
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Query: 414 VLQDMLMGKFCAPDVVS--FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
VL+ ++ G P+ VS F+ ++ A ++++ +F ++ GL+P + L+
Sbjct: 117 VLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS-CGLKPHLQACTVLL 175
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
L K + + + ++ MV G+ A+ Y ++V E+A+ ++
Sbjct: 176 NSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF 235
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
D F Y ++ C+ EA + SGV+PNI +YN I+ EA ++
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 592 VREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
RE+ K+ + + VT+ L I G R + E
Sbjct: 296 FREI-KDDVTANHVTYTTL--IDGYCRMNDIDE 325
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 173/396 (43%), Gaps = 3/396 (0%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V + L++ L G E I L +G + Y ++ +L + +H ++
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+++K G P +L+N II+ ++ G+ + + T+ L++ +
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 337 DVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
++++ +L +MLR E + R NI ++A M + DV+T
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
NT+ + + GS A ++ ++ P+V + T+++G + +++EA F+R M
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR-M 557
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
E G+ P + +N+LI+G + + V M G+ D T++ ++ +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+ + + D++ D ++ + KG R+G +A L ++ GV PN+ Y +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 576 INCACHLDLKSEAYQIVREM-KKNGLNPDCVTWRIL 610
I+ C +A Q+ ++M GL+P+ T+ L
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 207/481 (43%), Gaps = 57/481 (11%)
Query: 139 CPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRE 198
C +V S T L+NG G +A +F+ ++E G +P+ +TY+
Sbjct: 316 CGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTT---------------- 359
Query: 199 LMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
LV +L R+ F+ + + ++ G + +++ +
Sbjct: 360 ------------------------LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
I++ + G A +I +MK+ G P+ +N +I G K G +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 319 XXC-DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXX-XX 375
D T +LV+A C+ +++A ++ M + GV + +N +A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTV 434
ML ++ + +V T T++NG+C+ G ++EAL+ M +G P++ F ++
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG--VHPNLFVFNSL 572
Query: 435 ISGLLDATRVD---EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
I G L+ +D E DL M E G++P VVT++ L+ + +Y+ M+
Sbjct: 573 IKGFLNINDMDGVGEVVDL----MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNF 550
GI D ++I+ +G + E+A+ + + G+ N V Y I+ G C +G
Sbjct: 629 EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ-MRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 551 NEACHFLYELVD-SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+A ++ G+SPN+ +Y LI +A +++++M+ + P T ++
Sbjct: 688 KKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQL 747
Query: 610 L 610
+
Sbjct: 748 I 748
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 190/477 (39%), Gaps = 61/477 (12%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
++ L + R EAH F+ + G P T L+ L R + +L+ V K
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISK--VEKN 383
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + ++ +++ A +IF MK G P ++ TLI GY +G + ++
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 162 RKVFDEML-ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VA 218
++ D ML + ++PN T ++L++ +R +E ++ K+ GVK V
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSY-------GVKPDVV 496
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV-----VYGQMIDSLCKVGRYHGAAR 273
F L + R G AE++ L +V G +++ C+ G+ A R
Sbjct: 497 TFNTLAKAYARIGSTC----TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEAL 332
Y MK+ G P+ ++N +I G D M G D T+ L+ A
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNIND-MDGVGEVVDLMEEFGVKPDVVTFSTLMNAW 611
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
V D+ + E+ MLE D+
Sbjct: 612 SSVGDMKRCEEIY-----------------------------------TDMLEGGIDPDI 636
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDEAFDLF 451
+ + G+ + G ++A ++L M KF P+VV +T +ISG A + +A ++
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMR--KFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
++ GL P + TY LI G + K+P A + M + T +I +G
Sbjct: 695 KKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 177/427 (41%), Gaps = 30/427 (7%)
Query: 112 RLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES 171
+LM+ RP +AH IF + GH P++++YTTL+ + ++ ++
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA--FANLVDSLCR 229
G++P+++ ++ +I + +L+ K++E+M ESG K A F L+ +
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQA----MKIFEKMK---ESGCKPTASTFNTLIKGYGK 436
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQ------MIDSLCKVGRYHGAARIVYEMKKRGF 283
G E R+ + + L +E++ ++ + C + A IVY+M+ G
Sbjct: 437 IGKLEESSRLLDMM-----LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGV 491
Query: 284 VPSDVLYNYIIHGLTKDGD-CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
P V +N + + G C T +V C + K
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYC---EEGKME 548
Query: 343 EVLKLMLRKE--GVDKTR-IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
E L+ R + GV ++N ++ M E + DV+T +T++
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
N + G + ++ DML G PD+ +F+ + G A ++A + ++ M + G
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGI-DPDIHAFSILAKGYARAGEPEKAEQILNQ-MRKFG 666
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEA 518
+RP VV Y +I G A VY M G+ + TTY ++ G + Q +A
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA 726
Query: 519 KSFWHDV 525
+ D+
Sbjct: 727 EELLKDM 733
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 135/291 (46%), Gaps = 4/291 (1%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY LV AL ++ + + T ++N + A M
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
ES C+ T NT+I G+ K G ++E+ ++L ML + P+ + ++ + +
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG-VYSSMVSDGIGADSTTY 502
++EA+++ ++ M G++P VVT+N L + ++ A + M+ + + + T
Sbjct: 476 IEEAWNIVYK-MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELV 561
IV G C+ ++EEA F++ + G+H N FV+ +++KG + + + +
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMK-ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
+ GV P++ +++ L+N + +I +M + G++PD + IL K
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
G C DV S T +++GL++ R EA +F+ ++ E G +P ++TY L+ L + K
Sbjct: 313 GTTCG-DVRSRTKLMNGLIERGRPQEAHSIFNTLI-EEGHKPSLITYTTLVTALTRQKHF 370
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+ + S + +G+ D+ + I+ + +++A + + + +
Sbjct: 371 HSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTL 430
Query: 541 LKGLCRSGNFNEACHFL-YELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
+KG + G E+ L L D + PN + NIL+ C+ EA+ IV +M+ G
Sbjct: 431 IKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Query: 600 LNPDCVTWRILHKIQGKV 617
+ PD VT+ L K ++
Sbjct: 491 VKPDVVTFNTLAKAYARI 508
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
D + T ++ GL + + +EA S ++ +I Y ++ L R +F+
Sbjct: 317 GDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
+ ++ +G+ P+ +N +IN + +A +I +MK++G P T+ L K GK
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 617 VRK 619
+ K
Sbjct: 437 IGK 439
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 204/514 (39%), Gaps = 48/514 (9%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G P + N +L L++ + R ++ + G + Y LM + R
Sbjct: 142 GIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMAS--GIHGDVYTYGILMKGLSLTNRIG 199
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
D ++ MK G PN V Y TL++ C G +G AR + EM EPN +T+++LI
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILI 255
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
E+ L L+ K + V V +++ LC EG +E + E +
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVP-----DVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+G + V ++ C +G+ A R EM+++G++P+ YN +I G G
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
T+ L+ L D ++L++M + V RI + Y
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI-DPY- 428
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
N VI GF K ++AL+ L M +
Sbjct: 429 -------------------------------NCVIYGFYKENRWEDALEFLLKM---EKL 454
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
P V + + L + +D+ + +++ E G+ P ++ + LI + + ++
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV-PSIIVSHCLIHRYSQHGKIEESL 513
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
+ + MV+ G S+T+ ++ G C D++ F D+ + D Y +L+ L
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
C G+ +A +V+ + P+ ++ L+ C
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFC 607
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/574 (21%), Positives = 221/574 (38%), Gaps = 57/574 (9%)
Query: 101 PGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR-GHCPNVVSYTTLINGYCSVGGIG 159
PGF+ S Y L + CVFRR +++ +M + G P+ + T+I G+ I
Sbjct: 70 PGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIK 129
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KV 217
V D + + G++P+ ++ ++ VL + D++ RE + +M + SG+ V
Sbjct: 130 RVISVVDLVSKFGIKPSLKVFNSIL-DVLVKEDIDIAREFFTR---KM---MASGIHGDV 182
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ L+ L + F++ + + G VVY ++ +LCK G+ A ++ E
Sbjct: 183 YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
MK+ P+DV +N +I + ++ T ++E LC+
Sbjct: 243 MKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
V +A EVL+ + K G N ++ M +V T N
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I G+C G +D AL DM + +F T+I GL R D+ + +
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAI-RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
Query: 458 NGLRPCVV-TYNALIRGLYKLKRPNDAF-------------------------------- 484
+ + + YN +I G YK R DA
Sbjct: 418 DTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDL 477
Query: 485 -GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG 543
Y M+ +G ++ +IEE+ +D++ + + + A++ G
Sbjct: 478 KTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIG 537
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
C+ F+ ++ + G P+ SYN L+ C +A+ + M + + PD
Sbjct: 538 FCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Query: 604 CVTWRILHKIQGKVRKQTLSEYQSLSINYEGQDM 637
W L LS+ ++ +N QD+
Sbjct: 598 PSMWSSLM--------FCLSQKTAIHVNSSLQDI 623
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 153/387 (39%), Gaps = 71/387 (18%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T LHALC + + A S P+ T N+L++ + +Q+ L+
Sbjct: 222 TLLHALCKNGKVGRARSLMS----EMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCF-- 275
Query: 100 KPGFVPSLVNYHRLMDQFC----------VFRR-----------PCD------------- 125
GFVP +V ++M+ C V R C+
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 126 -AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A R F +M+ +G+ PNV +Y LI GYC VG + A F++M + N T++ LI
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 185 RGV---------------LQERDLEGGREL---MCKLW-----ERMSVEVESGVKVAA-F 220
RG+ +Q+ D G + C ++ R +E +K+ F
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 221 ANLVD------SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
VD SLC +G +++ +++ +G + +V +I + G+ + +
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ +M RG++P +N +I G K M G + +Y L+E LC
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYN 361
D+ KA + M+ K V +++
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPDPSMWS 602
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 166/394 (42%), Gaps = 2/394 (0%)
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGS-LAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ + +++ L +EG +V + E+ +G + + Y +I S K+GR A R+
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EMK P++ +Y ++ K G + +TY L++ L
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
VD+A K MLR N + M +C V++ N
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
TVI ++ + + D + +P +++ +I G RV++A L M
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE-MD 436
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
E G PC Y +LI L K KR A ++ + + S Y ++++ C ++
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
EA ++++ D + Y A++ G+ ++G NEA L ++ ++G +I S+NI++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 577 NCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
N + A ++ +K +G+ PD VT+ L
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 195/479 (40%), Gaps = 9/479 (1%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P V+S L+ + A VF + +P S TY+ +I ++QE G E
Sbjct: 162 PAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE----GQHEK 215
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+ +++ M E + ++ L+ S + G + R+ +E+ E +Y ++
Sbjct: 216 VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
KVG+ A + EMK+ G P+ Y +I GL K G Y
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXX 379
L+ L V V++ V M YN ++A
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 380 XXSMLES-QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
+++ T + +I+G+CKT V++AL +L++M F P ++ ++I+ L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF-PPCPAAYCSLINAL 454
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
A R + A +LF + + EN Y +I+ K + ++A +++ M + G G D
Sbjct: 455 GKAKRYEAANELF-KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
Y ++ G+ I EA S + D + IL G R+G A
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKV 617
+ SG+ P+ +YN L+ C H + EA +++REMK G D +T+ + G V
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 164/413 (39%), Gaps = 12/413 (2%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P + Y L+ + R A R+F +MK+ P YTTL+ Y VG + A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFAN 222
F+EM +G P TY+ LI+G+ + G + ++ M + G+ V N
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGK----AGRVDEAYGFYKDM---LRDGLTPDVVFLNN 343
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE-MKKR 281
L++ L + G E+ + E+ V Y +I +L + + ++ MK
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
PS+ Y+ +I G K + C Y L+ AL + A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
E+ K + G +R+Y + ++ M DV N +++G
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
K G ++EA +L+ M C D+ S +++G A ++F + +G++
Sbjct: 524 MVKAGMINEANSLLRKMEENG-CRADINSHNIILNGFARTGVPRRAIEMFETI-KHSGIK 581
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
P VTYN L+ +A + M G D+ TY+ I++ + + D
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 5/229 (2%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
T++ + K G V++AL + ++M C+P V ++T +I GL A RVDEA+ F++ M
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRAG-CSPTVYTYTELIKGLGKAGRVDEAYG-FYKDML 330
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+GL P VV N L+ L K+ R + V+S M +Y +++ L +
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 517 EAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
S W D + + F Y+ ++ G C++ +A L E+ + G P +Y L
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
IN A ++ +E+K+N N + ++ K GK K LSE
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK--LSE 497
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 141/385 (36%), Gaps = 41/385 (10%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ + G P++ Y L+ R +A+ + DM G P+VV L+N VG
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ + VF EM P ++Y+ +I+ + ES V
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALF-----------------------ESKAHV 390
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ ++ D ++ E Y +ID CK R A ++ E
Sbjct: 391 SEVSSWFD----------------KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M ++GF P Y +I+ L K + Y V+++
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ +A ++ M + YN + M E+ CRAD+ + N
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
++NGF +TG A+++ + + PD V++ T++ A +EA + R M +
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGI-KPDGVTYNTLLGCFAHAGMFEEAARMM-REMKD 612
Query: 458 NGLRPCVVTYNALIRGLYKLKRPND 482
G +TY++++ + + D
Sbjct: 613 KGFEYDAITYSSILDAVGNVDHEKD 637
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
E + +Q+++ + + + ++ L A V +A +F++ +P TYN+
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK-CKPTSSTYNS 202
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDG-IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
+I L + + VY+ M ++G D+ TY+ ++ + + A + ++
Sbjct: 203 VILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDN 262
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+Y +L + G +A E+ +G SP +++Y LI EA
Sbjct: 263 CMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Query: 589 YQIVREMKKNGLNPDCVTWRILHKIQGKV 617
Y ++M ++GL PD V L I GKV
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 199/465 (42%), Gaps = 21/465 (4%)
Query: 118 CVFRRPCD-AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPN 176
C+ R + A ++ + + G P+ +L+ V G+ AR+ + ML G N
Sbjct: 211 CIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLN 270
Query: 177 SLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFN 234
+ S+ IR + + G WE + G++ + AF +D LC+ GF
Sbjct: 271 AAVLSLFIRKYCSDGYFDKG-------WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
E + +L G + V +ID CKVG+ A ++++ + R P+ +Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFL 380
Query: 295 HGLTKDGDCMRG---YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+ GD +R +Q C Y +++ C++ DKA + +L+
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVC---YTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
I + A +M + DV+T N +++G+ KT +++
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
+++ +M +PDV ++ +I ++ +DEA ++ ++ G P + + +I
Sbjct: 498 FELIDEMRSAGI-SPDVATYNILIHSMVVRGYIDEANEIISELI-RRGFVPSTLAFTDVI 555
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G K +AF ++ M + D T + ++ G C ++E+A ++ ++
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
D +Y ++ G C G+ +AC + +V G+ PN +++ L+
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 168/439 (38%), Gaps = 45/439 (10%)
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
G+ P+ L++ +L+ LE RE + + R + A + + C +G
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSR-----GRHLNAAVLSLFIRKYCSDG 285
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+F++ + + + G + V + ID LCK G A +++++K G V +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G K G K E +KL+
Sbjct: 346 SVIDGFCKVG--------------------------------------KPEEAIKLIHSF 367
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
+Y+ +L + E D + T+I+G+C G D+A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
+ +L P + + T +I + +A +F R M GL+ VVTYN L+
Sbjct: 428 FQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVF-RNMKTEGLKLDVVTYNNLM 485
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G K + N F + M S GI D TY I++ + I+EA ++I +
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ ++ G + G+F EA + + D + P++ + + L++ C +A +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 592 VREMKKNGLNPDCVTWRIL 610
++ GL PD V + L
Sbjct: 606 FNKLLDAGLKPDVVLYNTL 624
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 185/464 (39%), Gaps = 67/464 (14%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCV---FR 121
G P C LL +LR V L +A+ FV +++ R ++ + R
Sbjct: 231 GIFPSRGVCISLLKEILR----------VHGLELARE-FVEHMLSRGRHLNAAVLSLFIR 279
Query: 122 RPCD------AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
+ C + MK+ G P++V++T I+ C G + +A V ++ G+
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
+S++ S +I G + E +L+ R ++ V +++ + ++C G
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV--------YSSFLSNICSTGDMLR 391
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
I +E+ G L + V Y MID C +GR A + + K G PS
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS--------- 442
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
LT T +L+ A + A V + M + EG+
Sbjct: 443 -LT-------------------------TSTILIGACSRFGSISDAESVFRNM-KTEGLK 475
Query: 356 KTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+ YN + M + DV T N +I+ G +DEA ++
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
+ +++ F P ++FT VI G EAF L+ M + ++P VVT +AL+ G
Sbjct: 536 ISELIRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWF-YMADLRMKPDVVTCSALLHGY 593
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
K +R A +++ ++ G+ D Y ++ G C IE+A
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 5/237 (2%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
ML + L+ I +C G D+ ++L M PD+V+FT I L A
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI-RPDIVAFTVFIDKLCKAG 320
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ EA + + + G+ V+ +++I G K+ +P +A + S + + Y
Sbjct: 321 FLKEATSVLFK-LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVY 376
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+ + +C + A + + ++ + D Y ++ G C G ++A + L+
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
SG P++ + ILI S+A + R MK GL D VT+ L GK +
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H +++ ++ + ++G PD T N+L+ ++ + ++ LI +
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI--RR 542
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GFVPS + + ++ F +A ++F M + P+VV+ + L++GYC + A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
+F+++L++G++P+ + Y+ LI G D+E EL+ + +R + ES
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H++ EA++ S + G VP ++ + R Q A + +A
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK-RGDFQE-AFILWFYMADL 577
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P +V L+ +C +R A +F + + G P+VV Y TLI+GYCSVG I A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
++ M++ G+ PN T+ L+ G+ +R
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKR 667
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 199/465 (42%), Gaps = 21/465 (4%)
Query: 118 CVFRRPCD-AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPN 176
C+ R + A ++ + + G P+ +L+ V G+ AR+ + ML G N
Sbjct: 211 CIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLN 270
Query: 177 SLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFN 234
+ S+ IR + + G WE + G++ + AF +D LC+ GF
Sbjct: 271 AAVLSLFIRKYCSDGYFDKG-------WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
E + +L G + V +ID CKVG+ A ++++ + R P+ +Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFL 380
Query: 295 HGLTKDGDCMRG---YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+ GD +R +Q C Y +++ C++ DKA + +L+
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVC---YTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
I + A +M + DV+T N +++G+ KT +++
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
+++ +M +PDV ++ +I ++ +DEA ++ ++ G P + + +I
Sbjct: 498 FELIDEMRSAGI-SPDVATYNILIHSMVVRGYIDEANEIISELI-RRGFVPSTLAFTDVI 555
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G K +AF ++ M + D T + ++ G C ++E+A ++ ++
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
D +Y ++ G C G+ +AC + +V G+ PN +++ L+
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 168/439 (38%), Gaps = 45/439 (10%)
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
G+ P+ L++ +L+ LE RE + + R + A + + C +G
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSR-----GRHLNAAVLSLFIRKYCSDG 285
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+F++ + + + G + V + ID LCK G A +++++K G V +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+I G K G K E +KL+
Sbjct: 346 SVIDGFCKVG--------------------------------------KPEEAIKLIHSF 367
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
+Y+ +L + E D + T+I+G+C G D+A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
+ +L P + + T +I + +A +F R M GL+ VVTYN L+
Sbjct: 428 FQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVF-RNMKTEGLKLDVVTYNNLM 485
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G K + N F + M S GI D TY I++ + I+EA ++I +
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ ++ G + G+F EA + + D + P++ + + L++ C +A +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 592 VREMKKNGLNPDCVTWRIL 610
++ GL PD V + L
Sbjct: 606 FNKLLDAGLKPDVVLYNTL 624
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 185/464 (39%), Gaps = 67/464 (14%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCV---FR 121
G P C LL +LR V L +A+ FV +++ R ++ + R
Sbjct: 231 GIFPSRGVCISLLKEILR----------VHGLELARE-FVEHMLSRGRHLNAAVLSLFIR 279
Query: 122 RPCD------AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
+ C + MK+ G P++V++T I+ C G + +A V ++ G+
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
+S++ S +I G + E +L+ R ++ V +++ + ++C G
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV--------YSSFLSNICSTGDMLR 391
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
I +E+ G L + V Y MID C +GR A + + K G PS
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS--------- 442
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
LT T +L+ A + A V + M + EG+
Sbjct: 443 -LT-------------------------TSTILIGACSRFGSISDAESVFRNM-KTEGLK 475
Query: 356 KTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+ YN + M + DV T N +I+ G +DEA ++
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
+ +++ F P ++FT VI G EAF L+ M + ++P VVT +AL+ G
Sbjct: 536 ISELIRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWF-YMADLRMKPDVVTCSALLHGY 593
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
K +R A +++ ++ G+ D Y ++ G C IE+A
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 5/237 (2%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
ML + L+ I +C G D+ ++L M PD+V+FT I L A
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI-RPDIVAFTVFIDKLCKAG 320
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ EA + + + G+ V+ +++I G K+ +P +A + S + + Y
Sbjct: 321 FLKEATSVLFK-LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVY 376
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+ + +C + A + + ++ + D Y ++ G C G ++A + L+
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
SG P++ + ILI S+A + R MK GL D VT+ L GK +
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H +++ ++ + ++G PD T N+L+ ++ + ++ LI +
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI--RR 542
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GFVPS + + ++ F +A ++F M + P+VV+ + L++GYC + A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
+F+++L++G++P+ + Y+ LI G D+E EL+ + +R + ES
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H++ EA++ S + G VP ++ + R Q A + +A
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSK-RGDFQE-AFILWFYMADL 577
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P +V L+ +C +R A +F + + G P+VV Y TLI+GYCSVG I A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
++ M++ G+ PN T+ L+ G+ +R
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKR 667
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 159/386 (41%), Gaps = 38/386 (9%)
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
++ +L R G RI E G + +I + + G + A + MK+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
P+ V YN +I K G + + + FD
Sbjct: 299 LRPNLVTYNAVIDACGKGG-------------------------MEFKQVAKFFD----- 328
Query: 343 EVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+++ GV RI +N L M + DV + NT+++
Sbjct: 329 -----EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
CK G +D A ++L M + K P+VVS++TVI G A R DEA +LF M G+
Sbjct: 384 ICKGGQMDLAFEILAQMPV-KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-MRYLGIA 441
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
V+YN L+ K+ R +A + M S GI D TY ++ G + +E K
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
+ ++ + + Y+ ++ G + G + EA E +G+ ++ Y+ LI+ C
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTW 607
L A ++ EM K G++P+ VT+
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTY 587
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG-RYHGAA 272
G V AF+ L+ + R G E + + G V Y +ID+ K G + A
Sbjct: 265 GNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+ EM++ G P + +N ++ ++ G +Y L++A+
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
C +D A E+L M K + +V
Sbjct: 385 CKGGQMDLAFEILAQMPVK-----------------------------------RIMPNV 409
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
++ +TVI+GF K G DEAL + +M +G A D VS+ T++S R +EA D+
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLG--IALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M G++ VVTYNAL+ G K + ++ V++ M + + + TY+ +++G
Sbjct: 468 -REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+EA + + D +Y+A++ LC++G A + E+ G+SPN+ +
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 572 YNILINC 578
YN +I+
Sbjct: 587 YNSIIDA 593
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 159/372 (42%), Gaps = 63/372 (16%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI--GDARKVFDEMLESGVEPNSLTYSV 182
+A +F MK G PN+V+Y +I+ C GG+ K FDEM +GV+P+ +T++
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 183 LI----RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFR 238
L+ RG L E R L ++ R +E V ++ L+D++C+ G + F
Sbjct: 345 LLAVCSRGGL----WEAARNLFDEMTNR---RIEQ--DVFSYNTLLDAICKGGQMDLAFE 395
Query: 239 IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLT 298
I ++P + + V Y +ID K GR+ A + EM+ G V YN ++ T
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 299 KDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTR 358
K G EAL D RE+ + ++K+ V
Sbjct: 456 KVGRSE-------------------------EAL------DILREMASVGIKKDVV---- 480
Query: 359 IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM 418
YN L M +++T +T+I+G+ K G EA+++ ++
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 419 LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
A DVV ++ +I L V A L M + G+ P VVTYN++I
Sbjct: 541 KSAGLRA-DVVLYSALIDALCKNGLVGSAVSLIDE-MTKEGISPNVVTYNSII------- 591
Query: 479 RPNDAFGVYSSM 490
DAFG ++M
Sbjct: 592 ---DAFGRSATM 600
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 164/403 (40%), Gaps = 55/403 (13%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A RIF G+ V +++ LI+ Y G +A VF+ M E G+ PN +TY+ +I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 186 GVLQERDLEGGREL--MCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAE 241
+ GG E + K ++ M +GV+ F +L+ R G + + +
Sbjct: 312 ACGK-----GGMEFKQVAKFFDEMQ---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
E+ + + Y ++D++CK G+ A I+ +M + +P+ V Y+ +I G K G
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM--LRKEGVDKTRI 359
FD E L L +R G+ R+
Sbjct: 424 R---------------------------------FD-----EALNLFGEMRYLGIALDRV 445
Query: 360 -YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM 418
YN L M + DV+T N ++ G+ K G DE KV +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 419 LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
+ P++++++T+I G EA ++F R GLR VV Y+ALI L K
Sbjct: 506 KR-EHVLPNLLTYSTLIDGYSKGGLYKEAMEIF-REFKSAGLRADVVLYSALIDALCKNG 563
Query: 479 RPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
A + M +GI + TY I++ ++ + +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 5/202 (2%)
Query: 104 VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARK 163
+P++V+Y ++D F R +A +F +M+ G + VSY TL++ Y VG +A
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANL 223
+ EM G++ + +TY+ L+ G ++ G + + K++ M E + ++ L
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQ----GKYDEVKKVFTEMKRE-HVLPNLLTYSTL 520
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+D + G + E I E G A+ V+Y +ID+LCK G A ++ EM K G
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 284 VPSDVLYNYIIHGLTKDGDCMR 305
P+ V YN II + R
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDR 602
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI----SGLLDATRVDEA 447
V + +I+ + ++G +EA+ V M P++V++ VI G ++ +V +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 448 FDLFHRVMPENGLRPCVVTYNALIR-----GLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
FD R NG++P +T+N+L+ GL++ R ++ M + I D +Y
Sbjct: 327 FDEMQR----NGVQPDRITFNSLLAVCSRGGLWEAAR-----NLFDEMTNRRIEQDVFSY 377
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+++ +C Q++ A + + + Y+ ++ G ++G F+EA + E+
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
G++ + SYN L++ + EA I+REM G+ D VT+ L GK K
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 88/228 (38%), Gaps = 42/228 (18%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S +T + + RF EA F G D + N LL+ + + ++R +
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
A G +V Y+ L+ + + + ++F +MK PN+++Y+TLI+GY G
Sbjct: 471 --ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+A ++F E +G+ + + YS LI
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALI-------------------------------- 556
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
D+LC+ G + +E+ +G V Y +ID+ +
Sbjct: 557 --------DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 197/456 (43%), Gaps = 31/456 (6%)
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAE 241
I +L+ D+ G L L E +E V++ A F L S + VF+ AE
Sbjct: 73 ISNLLENTDVVPGSSLESALDE---TGIEPSVELVHALFDRLSSSPM---LLHSVFKWAE 126
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR----GFVPSD----VLYNYI 293
P G ++ +++SLCK + A +V++ + V +D ++ Y
Sbjct: 127 MKP--GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYA 184
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTYKVLVEALC---HVFDVDKAREVLKLML 349
G+ + +R ++ + +VL++ALC HV + E + +
Sbjct: 185 RAGMVQQA--IRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTM 242
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
V RI+NI L M + V+T T+I G+C+ V
Sbjct: 243 DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQ 302
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP-ENGLRPCVVTYN 468
A++VL++M M + + + F +I GL +A R+ EA + R E+G P +VTYN
Sbjct: 303 IAMEVLEEMKMAEMEI-NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PTIVTYN 359
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
+L++ K A + M++ G+ +TTY + ++ EE + + +I
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 529 SGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
D Y ILK LC G + A E+ + G+ P++ + +LI+ C L++ EA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 589 YQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
++ + G+ P +T+++ I +R + +S+
Sbjct: 480 FEEFDNAVRRGIIPQYITFKM---IDNGLRSKGMSD 512
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 188/479 (39%), Gaps = 27/479 (5%)
Query: 7 LISLKPKPFIPFSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGS 66
LI P +P +T P ++ + +T+ L ++ S +G
Sbjct: 43 LIQRIQSPAVP-----DSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGI 97
Query: 67 VPDHRTCNVLLARLLRSRTPLQT---WALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRP 123
P + L RL S L + WA + KPGF S + +++ C R
Sbjct: 98 EPSVELVHALFDRLSSSPMLLHSVFKWAEM------KPGFTLSPSLFDSVVNSLCKAREF 151
Query: 124 CDAHRIFFDMKNRGHCPNVVS---YTTLINGYCSVGGIGDARKVFDEMLESGVEP--NSL 178
A + FD N+VS + LI Y G + A + F+ EP S
Sbjct: 152 EIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSA 209
Query: 179 TYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG--VKVAAFANLVDSLCREGFFNEV 236
T L+ +L EG ER+ ++S V F L++ R +
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 237 FRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHG 296
++ EE+ V YG +I+ C++ R A ++ EMK + +++N II G
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 297 LTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK 356
L + G TY LV+ C D+ A ++LK+M+ + GVD
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTR-GVDP 388
Query: 357 -TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVL 415
T YN + + ++E+ D +T + ++ C+ G + A++V
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVN 448
Query: 416 QDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
++M + PD+++ T +I L ++EAF+ F + G+ P +T+ + GL
Sbjct: 449 KEM-KNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV-RRGIIPQYITFKMIDNGL 505
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 142/357 (39%), Gaps = 12/357 (3%)
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEEL----PCQGSLAEEVVYGQMIDSLCKVGRYHG 270
V F L+ R G + R E P S E + ++D+LCK G
Sbjct: 171 VSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVRE 230
Query: 271 AA----RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
A+ RI M +VPS ++N +++G + + + TY
Sbjct: 231 ASMYLERIGGTMDS-NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYG 289
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
L+E C + V A EVL+ M E ++N +
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
+ ++T N+++ FCK G + A K+L+ M+M + P ++ + +E
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILK-MMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
+L+ +++ E G P +TY+ +++ L + + + A V M + GI D T T+++
Sbjct: 409 GMNLYFKLI-EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
LC + +EEA + + + I + I GL RS ++ L L+ S
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL-RSKGMSDMAKRLSSLMSS 523
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 173/388 (44%), Gaps = 19/388 (4%)
Query: 237 FRIAEELPCQGSLAEEVVYGQMIDSLCK-VGRYH---GAARIVYEMKKRGFVPSDVLYNY 292
F+ AE+L + + VV ++ S+C+ GR H + R+ ++MK PS Y
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKE 352
++ L ++ ++ + VL++ALC A + L + K
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 353 GVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
G D + Y + M+E C V+T ++ING C + +VDEA
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++ L++M K P+V ++++++ GL R +A +LF +M G RP +VTY LI
Sbjct: 247 MRYLEEM-KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRPNMVTYTTLI 304
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
GL K ++ +A + M G+ D+ Y ++ G C + EA +F ++I GI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL-GGI 363
Query: 532 HDNFVYAAI--------LKGLCRSGNFNEACHFLY-ELVDSGVSPNIFSYNILINCACHL 582
N + I ++GLC N+ LY + G+S + + L+ C C
Sbjct: 364 TPNRLTWNIHVKTSNEVVRGLC--ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421
Query: 583 DLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+A Q+V E+ +G P TW++L
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 168/422 (39%), Gaps = 72/422 (17%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
PS Q + T L L + N+ + A + + G P + NVL+ L R+ +
Sbjct: 119 PS-QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA-G 176
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L L + K G P Y L+ C F R +A ++F +M + P VV+YT+LING
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
C + +A + +EM G+EPN TYS L+ G+ ++ GR L M +
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD-----GRSLQAMELFEMMMAR 291
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+ + L+ LC+E E + + + QG + +YG++I C + ++ A
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
A + EM G P+ + +N IH T + +V
Sbjct: 352 ANFLDEMILGGITPNRLTWN--IHVKTSNE--------------------------VVRG 383
Query: 332 LCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
LC + +R + +YL SM +
Sbjct: 384 LCANY-------------------PSRAFTLYL-----------------SMRSRGISVE 407
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V TL +++ CK G +A++ L D ++ C P ++ +I LD T V EA D
Sbjct: 408 VETLESLVKCLCKKGEFQKAVQ-LVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Query: 452 HR 453
R
Sbjct: 467 LR 468
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C P ++ TV++ L++ +++ AF F++ M E GL P V + N LI+ L + DA
Sbjct: 117 CDPSQKAYVTVLAILVEENQLNLAFK-FYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 484 -FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
++ M G DS TY ++ GLC +I+EAK + +++ Y +++
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
GLC S N +EA +L E+ G+ PN+F+Y+ L++ C +A ++ M G P
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 603 DCVTWRILHKIQGKVRKQTLSEYQSL--SINYEGQDMD 638
+ VT+ L I G ++Q + E L +N +G D
Sbjct: 296 NMVTYTTL--ITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 176/438 (40%), Gaps = 86/438 (19%)
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
++ GY V D+ +VF +M + +P+ Y ++ +++E L L K ++
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQL----NLAFKFYKN 146
Query: 207 MSVEVESGVKVAAFANLVDSLCR-EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV 265
M E+ VA+ L+ +LCR +G + +I E+P +G + YG +I LC+
Sbjct: 147 MR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF 205
Query: 266 GRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTY 325
GR A ++ EM ++ P+ V Y +I+GL + + TY
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 326 KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLE 385
L++ LC +A E+ ++M+ +
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMAR---------------------------------- 291
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
CR +++T T+I G CK + EA+++L M + PD + VISG ++
Sbjct: 292 -GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL-KPDAGLYGKVISGFCAISKFR 349
Query: 446 EAFDLFHRVMPENGLRPCVVTY-------NALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
EA + M G+ P +T+ N ++RGL P+ AF +Y SM S GI +
Sbjct: 350 EAANFLDE-MILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVE 407
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
T +E L C LC+ G F +A +
Sbjct: 408 VET----LESLVKC-------------------------------LCKKGEFQKAVQLVD 432
Query: 559 ELVDSGVSPNIFSYNILI 576
E+V G P+ ++ +LI
Sbjct: 433 EIVTDGCIPSKGTWKLLI 450
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 194/450 (43%), Gaps = 37/450 (8%)
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+++ +M + G+ NV ++ +I +C + +A VF ML+ GV PN ++++++I G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 188 LQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQG 247
+ D+ +L+ K+ MS S V + ++++ C+ G + RI ++ G
Sbjct: 264 CKTGDMRFALQLLGKMG-MMSGNFVSPNAV-TYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 248 SLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
E YG ++D+ + G A R+ EM +G V + V+YN I++ L +GD
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 308 QXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAX 367
T ++V LC V +A E + + K+ V+ +N +
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 368 XXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFC-- 424
SML D I+ T+I+G+ K G ++ AL++ M+ M K
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 425 ---------------------------APDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
D+V++ T+++ L V+EA D+ ++ +
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQ 561
Query: 458 NGLRPC-VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+G + +VT+N +I L K A V MV G+ DS TY ++ E
Sbjct: 562 DGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQE 621
Query: 517 EAKSFWHDVIWPSGI--HDNFVYAAILKGL 544
+ HD + G+ H++ +Y +I++ L
Sbjct: 622 KVVEL-HDYLILQGVTPHEH-IYLSIVRPL 649
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 191/489 (39%), Gaps = 53/489 (10%)
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
G P+ + L+R Q D +G E++ E+ E V V A N + L
Sbjct: 145 GSSPD--VFDSLVRACTQNGDAQGAYEVI----EQTRAE-GFCVSVHALNNFMGCLLNVN 197
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+ +++ +E+ G + + +I S CK + A + Y M K G P+ V +N
Sbjct: 198 EIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFN 257
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH---TYKVLVEALCHVFDVDKAREVLKLM 348
+I G K GD Q TY ++ C +D A + M
Sbjct: 258 MMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDM 317
Query: 349 LRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
+ K GVD R Y + A M + + N+++ G
Sbjct: 318 V-KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
++ A+ VL+DM K D + V+ GL V EA + F R + E L +V +
Sbjct: 377 IEGAMSVLRDM-NSKNMQIDRFTQAIVVRGLCRNGYVKEAVE-FQRQISEKKLVEDIVCH 434
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
N L+ + K+ A + SM+ G+ D+ ++ +++G ++E A + +I
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 528 PSGIHDNFVYAAILKGLCR-------------------------------SGNFNEACHF 556
+ + +Y +I+ GL + +GN EA
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 557 LYELV--DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL---- 610
L ++ D S ++ ++NI+IN C +A ++++ M + G+ PD +T+ L
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 611 --HKIQGKV 617
H+ Q KV
Sbjct: 615 SKHRSQEKV 623
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 192/476 (40%), Gaps = 82/476 (17%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+++ C ++ EA F L G P+ + N+++ ++ L+ + +
Sbjct: 225 IYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSG 284
Query: 102 GFV-PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
FV P+ V Y+ +++ FC R A RI DM G N +Y L++ Y G +
Sbjct: 285 NFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDE 344
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A ++ DEM G+ N++ Y+ ++ + E D+EG ++ + + +++++ +
Sbjct: 345 ALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK-NMQIDRFTQ---- 399
Query: 221 ANLVDSLCREGFFNEVF---------RIAEELPCQGSLAEEVV----------------- 254
A +V LCR G+ E ++ E++ C +L V
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 255 ---------YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
+G +ID K G+ A I M K + V+YN I++GL+K G M
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG--MA 517
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLR 365
G TY L+ +V++A ++L M +++G
Sbjct: 518 GAAEAVVNAMEIKDIV--TYNTLLNESLKTGNVEEADDILSKMQKQDG------------ 563
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA 425
+ ++T N +IN CK GS ++A +VL+ M+ +
Sbjct: 564 ---------------------EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMV-ERGVV 601
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
PD +++ T+I+ R E H + G+ P Y +++R L L R N
Sbjct: 602 PDSITYGTLITS-FSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL--LDREN 654
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 47/289 (16%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA--PDVVSFTTVISGLLDATRVDEAF 448
+V T N VI FCK + EAL V ML C P+VVSF +I G + A
Sbjct: 217 NVNTFNLVIYSFCKESKLFEALSVFYRMLK---CGVWPNVVSFNMMIDGACKTGDMRFAL 273
Query: 449 DLFHRV--MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
L ++ M N + P VTYN++I G K R + A + MV G+ + TY +V
Sbjct: 274 QLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALV 333
Query: 507 ----------EGLCDCDQIEEAKSFWHDVIWPSGIH------------------------ 532
E L CD++ + VI+ S ++
Sbjct: 334 DAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ 393
Query: 533 -DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
D F A +++GLCR+G EA F ++ + + +I +N L++ + A QI
Sbjct: 394 IDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQI 453
Query: 592 VREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSINYEGQDMDNK 640
+ M GL+ D +++ L I G +++ L ++L I Y+G NK
Sbjct: 454 LGSMLVQGLSLDAISFGTL--IDGYLKEGKLE--RALEI-YDGMIKMNK 497
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/567 (21%), Positives = 230/567 (40%), Gaps = 61/567 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPC-DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
G P+LV Y+ ++D F R + +M+++G + + +T+++ G + +
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A++ F E+ G EP ++TY+ L++ V + + + K E S +S +
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQ-VFGKAGVYTEALSVLKEMEENSCPADS----VTY 354
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
LV + R GF E + E + +G + + Y +ID+ K G+ A ++ Y MK+
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
G VP+ YN ++ L K + T+ ++ ALC +DK
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDK 473
Query: 341 AREVLKLMLRKEGVDKTR-IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+ ++ G + R +N + A M + A V T N ++
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS------GLLDATRVD-------- 445
N + G V+ DM F P S++ ++ L R++
Sbjct: 534 NALARKGDWRSGENVISDMKSKGF-KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQI 592
Query: 446 ------------------------EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
AF LF + +G +P +V +N+++ + +
Sbjct: 593 FPSWMLLRTLLLANFKCRALAGSERAFTLFKK----HGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLC---DCDQIEEA-KSFWHDVIWPSGIHDNFVY 537
A G+ S+ DG+ D TY +++ +C + EE K+ + P D Y
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP----DLVSY 704
Query: 538 AAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
++KG CR G EA L E+ + G+ P IF+YN ++ + + +E ++ M K
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 598 NGLNPDCVTWRILHKIQGKVRKQTLSE 624
N P+ +T++++ + G R SE
Sbjct: 765 NDCRPNELTFKMV--VDGYCRAGKYSE 789
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 190/456 (41%), Gaps = 15/456 (3%)
Query: 69 DHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
D T N L+A +R+ + ++ ++ K G +P+ + Y ++D + + +A +
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIE--MMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F+ MK G PN +Y +++ + K+ +M +G PN T++ ++
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC- 466
Query: 189 QERDLEGGRELMCKLWERMSVEVES-GVKV--AAFANLVDSLCREGFFNEVFRIAEELPC 245
G + M K R+ E++S G + F L+ + R G + ++ E+
Sbjct: 467 -------GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
G A Y ++++L + G + ++ +MK +GF P++ Y+ ++ K G+ +
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLR 365
+ + L+ A + + L + I+N L
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCA 425
S+ E D++T N++++ + + G +A ++L+ + +
Sbjct: 640 IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL-K 698
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
PD+VS+ TVI G + EA + M E G+RPC+ TYN + G + +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSE-MTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
V M + + T+ ++V+G C + EA F
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 161/396 (40%), Gaps = 5/396 (1%)
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
V L RE ++ ++ +++P Q L + Y ++ + + G+Y A + MK+ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDVDKA 341
P+ V YN I+ K G R D T ++ A + +A
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+E + T YN L+ M E+ C AD +T N ++
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+ + G EA V++ M+ K P+ +++TTVI A + DEA LF+ M E G
Sbjct: 361 YVRAGFSKEAAGVIE-MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS-MKEAGCV 418
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P TYNA++ L K R N+ + M S+G + T+ ++ LC +++ +
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNR 477
Query: 522 WHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
+ G D + ++ R G+ +A E+ +G + + +YN L+N
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 581 HLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
++ +MK G P ++ ++ + K
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 209/526 (39%), Gaps = 57/526 (10%)
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
+V +YTT+++ Y G A +F+ M E G P +TY+V++ D+ G M
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL-------DVFGK---M 258
Query: 201 CKLWERMSVEVE----SGVKVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
+ W ++ ++ G+K F + ++ + REG E EL G V
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y ++ K G Y A ++ EM++ V YN ++ + G
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
TY +++A D+A ++ M V T YN L
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEAL-KVLQDMLMGKFCAPDVVSFTT 433
M + C + T NT++ C +D+ + +V ++M F PD +F T
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGF-EPDRDTFNT 496
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+IS +A ++ M G CV TYNAL+ L + V S M S
Sbjct: 497 LISAYGRCGSEVDASKMYGE-MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 494 GIGADSTTYTIIVEGLCDC----------DQIEEAKSFWHDVIWPSGIHDNF-------- 535
G T+Y+++++ ++I+E + F ++ + + NF
Sbjct: 556 GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 536 -----------------VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
++ ++L R+ +++A L + + G+SP++ +YN L++
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 579 ACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
+A +I++ ++K+ L PD V++ + I+G R+ + E
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTV--IKGFCRRGLMQE 719
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 33/207 (15%)
Query: 54 AHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRL 113
+ + F++ G PD N +L+ R+ Q ++ S + + G P LV Y+ L
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES--IREDGLSPDLVTYNSL 672
Query: 114 MDQFCVFRRPC-DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
MD + V R C A I ++ P++VSY T+I G+C G + +A ++ EM E G
Sbjct: 673 MDMY-VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA----------FAN 222
+ P TY+ + G M E+E ++ A F
Sbjct: 732 IRPCIFTYNTFVSGYTA---------------MGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 223 LVDSLCREGFFNEVFRIAEEL----PC 245
+VD CR G ++E ++ PC
Sbjct: 777 VVDGYCRAGKYSEAMDFVSKIKTFDPC 803
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 5/273 (1%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
H ++L + H + KA E+ K + TR YN+ ++A
Sbjct: 156 HLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
MLE DV + +I GFC+ G V+ A+++L DML F PD +S+TT+++ L T
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF-VPDRLSYTTLLNSLCRKT 274
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
++ EA+ L R M G P +V YN +I G + R DA V M+S+G +S +Y
Sbjct: 275 QLREAYKLLCR-MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSY 333
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELV 561
++ GLCD +E K + ++I G +F V ++KG C G EAC + ++
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMI-SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 392
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
+G + + ++ ++I C+ D +SE ++ E
Sbjct: 393 KNGETLHSDTWEMVIPLICNED-ESEKIKLFLE 424
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 8/297 (2%)
Query: 67 VPDHRTCNVLLARLLRSRTPLQ-TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCD 125
P + N +L L+ R LQ + L +S + G +P+ +Y+ LM FC+
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH--GVMPNTRSYNLLMQAFCLNDDLSI 208
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A+++F M R P+V SY LI G+C G + A ++ D+ML G P+ L+Y+ L+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
+ ++ L +L+C RM ++ + + ++ CRE + ++ +++
Sbjct: 269 SLCRKTQLREAYKLLC----RMKLK-GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
G V Y +I LC G + + + EM +GF P + N ++ G G
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
T+++++ +C+ + +K + L+ +++E TRI ++
Sbjct: 384 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDV 440
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ A C ++ S A+Q F L VPD + +L+ R L+ ++
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML--NK 254
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GFVP ++Y L++ C + +A+++ MK +G P++V Y T+I G+C DA
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
RKV D+ML +G PNS++Y LI G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGG----------------------------------- 339
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
LC +G F+E + EE+ +G V ++ C G+ A +V + K
Sbjct: 340 -----LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
Query: 282 G 282
G
Sbjct: 395 G 395
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
+ N ++ FC + A ++ ML + PDV S+ +I G +V+ A +L
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
++ G P ++Y L+ L + + +A+ + M G D Y ++ G C D
Sbjct: 251 ML-NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ +A+ D++ ++ Y ++ GLC G F+E +L E++ G SP+ N
Sbjct: 310 RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 369
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L+ C EA +V + KNG TW ++
Sbjct: 370 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ +AF+LF + +G+ P +YN L++ + A+ ++ M+ + D +Y
Sbjct: 171 LQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYK 229
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
I+++G C Q+ A D++ + D Y +L LCR EA L +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G +P++ YN +I C D +A +++ +M NG +P+ V++R L
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 103 FVPSLVNYHRLMDQFCVFRRPCD-AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
F P + +R++D R A +F + G PN SY L+ +C + A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++F +MLE V P+ +Y +LI+G ++ + G EL+ + + V ++
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR-----LSYT 264
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L++SLCR+ E +++ + +G + V Y MI C+ R A +++ +M
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
G P+ V Y +I GL G G + LV+ C V++A
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Query: 342 REVLKLMLR 350
+V++++++
Sbjct: 385 CDVVEVVMK 393
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
HTY +V L ++L M+R T YN + +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E+ C+ D +T T+I+ K G +D A+ + Q M G +PD +++ +I+ L A
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL-SPDTFTYSVIINCLGKAG 483
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ A LF M + G P +VTYN ++ K + +A +Y M + G D TY
Sbjct: 484 HLPAAHKLFCE-MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+I++E L C +EEA++ + ++ + I D VY ++ ++GN +A + ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+G+ PN+ + N L++ ++ +EAY++++ M GL P T+ +L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
K+ GH +YTT++ G K+ DEM+ G +PN++TY+ LI + L
Sbjct: 361 KHDGH-----TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 194 EGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+ ++ E+G K + L+D + GF + + + + G +
Sbjct: 416 NEAMNVFNQM-------QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
Y +I+ L K G A ++ EM +G P+ V YN ++ K + +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY +++E L H +++A V M +K + +Y + +
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+ML + R +V T N++++ F + + EA ++LQ+ML P + ++
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL-RPSLQTY 647
Query: 432 TTVISGLLDA-TRVDEAF 448
T ++S D +++D F
Sbjct: 648 TLLLSCCTDGRSKLDMGF 665
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D ++TT++ L A + L M +G +P VTYN LI + N+A V
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDE-MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
++ M G D TY +++ ++ A + + D F Y+ I+ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+G+ A E+VD G +PN+ +YNI+++ A ++ R+M+ G PD VT
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 607 WRILHKIQG 615
+ I+ ++ G
Sbjct: 542 YSIVMEVLG 550
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
A+ L D ++ C P+ V++ +I A ++EA ++F++ M E G +P VTY L
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPDRVTYCTL 440
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG 530
I K + A +Y M + G+ D+ TY++I+ L + A + +++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQG 499
Query: 531 IHDNFVYAAILKGL-CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
N V I+ L ++ N+ A ++ ++G P+ +Y+I++ H EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQGKV 617
+ EM++ PD + +L + GK
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 117/290 (40%), Gaps = 8/290 (2%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +V +L R F + ++ +E+ G V Y ++I S + + A + +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 280 KRGFVPSDVLYNYIIHGLTKDG---DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+ G P V Y +I K G M YQ TY V++ L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT---FTYSVIINCLGKAG 483
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+ A ++ M+ + YNI + M + D +T +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
V+ G ++EA V +M K PD + ++ A V++A+ +++ M
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAML 601
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
GLRP V T N+L+ ++ + +A+ + +M++ G+ TYT+++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A F+ + + G + TY ++ L + K+ + MV DG ++ TY ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ + EA + ++ + D Y ++ ++G + A + G+S
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
P+ F+Y+++INC A+++ EM G P+ VT+ I+ + K R
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H+ +N +EA F+ +G PD T L+ + ++ A+ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAG 463
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P Y +++ AH++F +M ++G PN+V+Y +++ + +A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K++ +M +G EP+ +TYS+++ + LE + ++ ++ + E +
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE-----PVYG 578
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
LVD + G + ++ + + G ++ + +V + A ++ M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 282 GFVPSDVLYNYII 294
G PS Y ++
Sbjct: 639 GLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
HTY +V L ++L M+R T YN + +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E+ C+ D +T T+I+ K G +D A+ + Q M G +PD +++ +I+ L A
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL-SPDTFTYSVIINCLGKAG 483
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ A LF M + G P +VTYN ++ K + +A +Y M + G D TY
Sbjct: 484 HLPAAHKLFCE-MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+I++E L C +EEA++ + ++ + I D VY ++ ++GN +A + ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+G+ PN+ + N L++ ++ +EAY++++ M GL P T+ +L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
K+ GH +YTT++ G K+ DEM+ G +PN++TY+ LI + L
Sbjct: 361 KHDGH-----TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 194 EGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+ ++ E+G K + L+D + GF + + + + G +
Sbjct: 416 NEAMNVFNQM-------QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
Y +I+ L K G A ++ EM +G P+ V YN ++ K + +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY +++E L H +++A V M +K + +Y + +
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+ML + R +V T N++++ F + + EA ++LQ+ML P + ++
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL-RPSLQTY 647
Query: 432 TTVISGLLDA-TRVDEAF 448
T ++S D +++D F
Sbjct: 648 TLLLSCCTDGRSKLDMGF 665
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D ++TT++ L A + L M +G +P VTYN LI + N+A V
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDE-MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
++ M G D TY +++ ++ A + + D F Y+ I+ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+G+ A E+VD G +PN+ +YNI+++ A ++ R+M+ G PD VT
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 607 WRILHKIQG 615
+ I+ ++ G
Sbjct: 542 YSIVMEVLG 550
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
A+ L D ++ C P+ V++ +I A ++EA ++F++ M E G +P VTY L
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPDRVTYCTL 440
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG 530
I K + A +Y M + G+ D+ TY++I+ L + A + +++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQG 499
Query: 531 IHDNFVYAAILKGL-CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
N V I+ L ++ N+ A ++ ++G P+ +Y+I++ H EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQGKV 617
+ EM++ PD + +L + GK
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 117/290 (40%), Gaps = 8/290 (2%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +V +L R F + ++ +E+ G V Y ++I S + + A + +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 280 KRGFVPSDVLYNYIIHGLTKDG---DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+ G P V Y +I K G M YQ TY V++ L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT---FTYSVIINCLGKAG 483
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+ A ++ M+ + YNI + M + D +T +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
V+ G ++EA V +M K PD + ++ A V++A+ +++ M
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAML 601
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
GLRP V T N+L+ ++ + +A+ + +M++ G+ TYT+++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A F+ + + G + TY ++ L + K+ + MV DG ++ TY ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ + EA + ++ + D Y ++ ++G + A + G+S
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
P+ F+Y+++INC A+++ EM G P+ VT+ I+ + K R
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H+ +N +EA F+ +G PD T L+ + ++ A+ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAG 463
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P Y +++ AH++F +M ++G PN+V+Y +++ + +A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K++ +M +G EP+ +TYS+++ + LE + ++ ++ + E +
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE-----PVYG 578
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
LVD + G + ++ + + G ++ + +V + A ++ M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 282 GFVPSDVLYNYII 294
G PS Y ++
Sbjct: 639 GLRPSLQTYTLLL 651
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
HTY +V L ++L M+R T YN + +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E+ C+ D +T T+I+ K G +D A+ + Q M G +PD +++ +I+ L A
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL-SPDTFTYSVIINCLGKAG 483
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ A LF M + G P +VTYN ++ K + +A +Y M + G D TY
Sbjct: 484 HLPAAHKLFCE-MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+I++E L C +EEA++ + ++ + I D VY ++ ++GN +A + ++
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+G+ PN+ + N L++ ++ +EAY++++ M GL P T+ +L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 16/318 (5%)
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
K+ GH +YTT++ G K+ DEM+ G +PN++TY+ LI + L
Sbjct: 361 KHDGH-----TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 194 EGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+ ++ E+G K + L+D + GF + + + + G +
Sbjct: 416 NEAMNVFNQM-------QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
Y +I+ L K G A ++ EM +G P+ V YN ++ K + +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY +++E L H +++A V M +K + +Y + +
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+ML + R +V T N++++ F + + EA ++LQ+ML P + ++
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL-RPSLQTY 647
Query: 432 TTVISGLLDA-TRVDEAF 448
T ++S D +++D F
Sbjct: 648 TLLLSCCTDGRSKLDMGF 665
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D ++TT++ L A + L M +G +P VTYN LI + N+A V
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDE-MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
++ M G D TY +++ ++ A + + D F Y+ I+ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+G+ A E+VD G +PN+ +YNI+++ A ++ R+M+ G PD VT
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 607 WRILHKIQG 615
+ I+ ++ G
Sbjct: 542 YSIVMEVLG 550
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
A+ L D ++ C P+ V++ +I A ++EA ++F++ M E G +P VTY L
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ-MQEAGCKPDRVTYCTL 440
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG 530
I K + A +Y M + G+ D+ TY++I+ L + A + +++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQG 499
Query: 531 IHDNFVYAAILKGL-CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
N V I+ L ++ N+ A ++ ++G P+ +Y+I++ H EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQGKV 617
+ EM++ PD + +L + GK
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 2/287 (0%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +V +L R F + ++ +E+ G V Y ++I S + + A + +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ G P V Y +I K G TY V++ L +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A ++ M+ + YNI + M + D +T + V+
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G ++EA V +M K PD + ++ A V++A+ +++ M G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAMLHAG 604
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
LRP V T N+L+ ++ + +A+ + +M++ G+ TYT+++
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A F+ + + G + TY ++ L + K+ + MV DG ++ TY ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ + EA + ++ + D Y ++ ++G + A + G+S
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
P+ F+Y+++INC A+++ EM G P+ VT+ I+ + K R
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 106/253 (41%), Gaps = 7/253 (2%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H+ +N +EA F+ +G PD T L+ + ++ A+ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAG 463
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P Y +++ AH++F +M ++G PN+V+Y +++ + +A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K++ +M +G EP+ +TYS+++ + LE + ++ ++ + E +
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE-----PVYG 578
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
LVD + G + ++ + + G ++ + +V + A ++ M
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 282 GFVPSDVLYNYII 294
G PS Y ++
Sbjct: 639 GLRPSLQTYTLLL 651
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 188/446 (42%), Gaps = 25/446 (5%)
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG---VKVAAFANLVDSLCREGF 232
NS TY L++ L+ RD ++ C E+ G + + A+ L+D+L ++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYC--------EIRRGGHKLDIFAYNMLLDALAKDEK 253
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
+VF ++ C+ +E Y MI ++ ++G+ A + EM G + V YN
Sbjct: 254 ACQVFEDMKKRHCR---RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC---HVFDVDKAREVLKLML 349
++ L K + Q ++TY +L+ L + +D E+ K +
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
+ IY+ +R M + + + +++ C G
Sbjct: 371 TQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
EA+++L + K D + + TV S L ++ DLF + M ++G P + TYN
Sbjct: 425 EAIEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK-MKKDGPSPDIFTYNI 482
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
LI ++ ++A ++ + D +Y ++ L ++EA + ++
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 530 GIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
D Y+ +++ ++ A E++ G PNI +YNIL++C +EA
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQG 615
+ +MK+ GL PD +T+ +L ++Q
Sbjct: 603 DLYSKMKQQGLTPDSITYTVLERLQS 628
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 185/462 (40%), Gaps = 59/462 (12%)
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC-KLWERMSVEVESGVKVAAF 220
R + D M++S V N T ++LI DL+ MC +L ++ +++ S +
Sbjct: 156 RSILDSMVKSNVHGNISTVNILIGFFGNTEDLQ-----MCLRLVKKWDLKMNS----FTY 206
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
L+ + R +++ F + E+ G + Y ++D+L K + A ++ +MKK
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKK 263
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
R C R ++TY +++ + + D+
Sbjct: 264 R--------------------HCRRD---------------EYTYTIMIRTMGRIGKCDE 288
Query: 341 AREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A + M+ EG+ + YN ++ M+E+ CR + T + ++
Sbjct: 289 AVGLFNEMI-TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV--MPE 457
N G + V++ + ++ + S+ ++ L V EA LF + P
Sbjct: 348 NLLVAEGQLVRLDGVVE--ISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
G R +Y +++ L + +A + S + G+ D+ Y + L QI
Sbjct: 404 KGERD---SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISH 460
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ + D F Y ++ R G +EA + EL S P+I SYN LIN
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
C EA+ +EM++ GLNPD VT+ L + GK +
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 150/393 (38%), Gaps = 57/393 (14%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG---I 158
G ++V Y+ LM + A ++F M G PN +Y+ L+N + G +
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRL 359
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
++ + G+ YS L+R + + + L C +W
Sbjct: 360 DGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMW-------------- 399
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
P +G E Y M++SLC G+ A ++ ++
Sbjct: 400 -----------------------SFPVKG---ERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
++G V ++YN + L K + TY +L+ + V +V
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
D+A + + + R + YN + M E DV+T +T+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+ F KT V+ A + ++ML+ K C P++V++ ++ L R EA DL+ + M +
Sbjct: 554 MECFGKTERVEMAYSLFEEMLV-KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK-MKQQ 611
Query: 459 GLRPCVVTYNALIR------GLYKLKRPNDAFG 485
GL P +TY L R G +++R N G
Sbjct: 612 GLTPDSITYTVLERLQSVSHGKSRIRRKNPITG 644
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
+ S + L +LC + + EA + S G V D N + + L + + L
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+ K G P + Y+ L+ F +A IF +++ P+++SY +LIN
Sbjct: 467 KM--KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
G + +A F EM E G+ P+ +TYS L+ + + E+ L+E M V+
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV----EMAYSLFEEMLVK-GCQ 579
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ + L+D L + G E + ++ QG + + Y +++ L V HG +RI
Sbjct: 580 PNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY-TVLERLQSVS--HGKSRI 636
Query: 275 VYEMKKRGFVPS 286
+ G+V S
Sbjct: 637 RRKNPITGWVVS 648
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 202/492 (41%), Gaps = 12/492 (2%)
Query: 143 VSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL-MC 201
++Y LI I A + +M + G + + + YS++I+ + + ++ L +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K ER +E++ V +++ + G ++ ++ G A+ +I +
Sbjct: 258 KEIERDKLELD----VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
L GR A + E+++ G P YN ++ G K G
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
+HTY +L++A + + AR VLK M + + +++ L
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M + D N VI+ F K +D A+ D ++ + PD V++ T+I
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF-DRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R A ++F M G PC TYN +I +R +D + M S GI + T
Sbjct: 493 GRHIVAEEMFE-AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
+T +V+ + +A ++ + +Y A++ + G +A + +
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
G+ P++ + N LIN +EA+ +++ MK+NG+ PD VT+ L K +V K
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK-- 669
Query: 622 LSEYQSLSINYE 633
+Q + + YE
Sbjct: 670 ---FQKVPVVYE 678
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 42/405 (10%)
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
R +A +F +++ G P +Y L+ GY G + DA + EM + GV P+ TYS
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+LI + E R ++ K E V+ S V F+ L+ G + + F++ +
Sbjct: 379 LLIDAYVNAGRWESAR-IVLKEMEAGDVQPNSFV----FSRLLAGFRDRGEWQKTFQVLK 433
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
E+ G + Y +ID+ K A M G P V +N +I
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI------- 486
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
DC C H ++ E E+ + M R+ + YN
Sbjct: 487 DC----------------HCKHGRHIVAE------------EMFEAMERRGCLPCATTYN 518
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
I + + M +V+T T+++ + K+G ++A++ L++M
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM-KS 577
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
P + +I+ ++A + F RVM +GL+P ++ N+LI + +R
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAF-RVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
+AF V M +G+ D TYT +++ L D+ ++ + ++I
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 152/412 (36%), Gaps = 50/412 (12%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ + + AL DS R EA F SG P R N LL +++ ++V +
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
K G P Y L+D + R A + +M+ PN ++ L+ G+ G
Sbjct: 366 --EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+V EM GV+P+ Y+V+I
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVI-------------------------------- 451
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
D+ + + + + +G + V + +ID CK GR+ A +
Sbjct: 452 --------DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Query: 277 EMKKRGFVPSDVLYNYII--HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
M++RG +P YN +I +G + D M+ HT LV+
Sbjct: 504 AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT--TLVDVYGK 561
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+ A E L+ M + +YN + A M + ++
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
LN++IN F + EA VLQ M PDVV++TT++ L+ RVD+
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALI---RVDK 669
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 11/239 (4%)
Query: 49 NRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLV 108
N A F L+ G PD T N L+ + + + ++ + G +P
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM--ERRGCLPCAT 515
Query: 109 NYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEM 168
Y+ +++ + R D R+ MK++G PNVV++TTL++ Y G DA + +EM
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 169 LESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDS 226
G++P+S Y+ LI Q R L + V G+K + A +L+++
Sbjct: 576 KSVGLKPSSTMYNALINAYAQ-------RGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
+ E F + + + G + V Y ++ +L +V ++ + EM G P
Sbjct: 629 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 19/321 (5%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---RSRTPLQ-TW 90
+H+ + + A ++ R+ A I L D + + + +RLL R R Q T+
Sbjct: 374 EHTYSLLIDAYVNAGRWESAR----IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
+++ + G P Y+ ++D F F A F M + G P+ V++ TLI+
Sbjct: 430 QVLKEM--KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
+C G A ++F+ M G P + TY+++I + + + L+ K+ +
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ---- 543
Query: 211 VESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRY 268
G+ V LVD + G FN+ EE+ G +Y +I++ + G
Sbjct: 544 ---GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS 600
Query: 269 HGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVL 328
A M G PS + N +I+ +D + TY L
Sbjct: 601 EQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 329 VEALCHVFDVDKAREVLKLML 349
++AL V K V + M+
Sbjct: 661 MKALIRVDKFQKVPVVYEEMI 681
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 48 SNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSL 107
S RF++A +C + G P N L+ ++ L A+ ++ G PSL
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAY--AQRGLSEQAVNAFRVMTSDGLKPSL 619
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ + L++ F RR +A + MK G P+VV+YTTL+ V V++E
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Query: 168 MLESGVEPNSLTYSVL 183
M+ SG +P+ S+L
Sbjct: 680 MIMSGCKPDRKARSML 695
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 121/587 (20%), Positives = 229/587 (39%), Gaps = 32/587 (5%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
+ ++ L C++ + A F+ L+ G + +H + +L+ + + + L+
Sbjct: 214 KFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIE 272
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
L + + Y L+ F R A ++F M+ G ++ Y LI G C
Sbjct: 273 ML--EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCK 330
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
+ A ++ E+ SG+ P+ L+ +E +L E++ ++ SV
Sbjct: 331 HKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV----- 385
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPC------------------QGSLAEEVVYG 256
+ + +L + R +E + + L + L +
Sbjct: 386 --MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLS 443
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
+I+ L K + A +++++ + G +P ++YN II G+ K+G +
Sbjct: 444 IVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDA 503
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL-RAXXXXXXXXX 375
T + L D A ++LK M R G + + +L +
Sbjct: 504 GVEPSQFTLNCIYGCLAERCDFVGALDLLKKM-RFYGFEPWIKHTTFLVKKLCENGRAVD 562
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI 435
+ ++ I+G K VD L++ +D+ C PDV+++ +I
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLI 621
Query: 436 SGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGI 495
L A R EA LF+ M GL+P V TYN++I G K + M D
Sbjct: 622 KALCKACRTMEADILFNE-MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH 555
D TYT ++ GLC + EA W+++ + + A+++GLC+ G EA
Sbjct: 681 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALV 740
Query: 556 FLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
+ E+ + + P+ Y L++ + + + I REM G P
Sbjct: 741 YFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 215/553 (38%), Gaps = 45/553 (8%)
Query: 67 VPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDA 126
VP+ T N LL + +S + R + GF ++ +C + A
Sbjct: 174 VPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERA 233
Query: 127 HRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+F ++ +RG +S T L+ +C G + A ++ + + E + N TY VLI G
Sbjct: 234 LSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHG 292
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
++E ++ +L K+ RM + + +A + L+ LC+ + E+
Sbjct: 293 FVKESRIDKAFQLFEKM-RRMGMNAD----IALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAAR----IVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
G + + G++ LC +R I+ ++ K+ + +LY + G ++
Sbjct: 348 GIPPDRGILGKL---LCSFSEESELSRITEVIIGDIDKKSVM---LLYKSLFEGFIRNDL 401
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML--RKEGVDKTRIY 360
Y ++ L ++ D E++KL+ K + +
Sbjct: 402 VHEAYS-------------------FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSL 442
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
+I + ++++ + N +I G CK G +E+LK+L +M
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-- 500
Query: 421 GKFCAPDVVSFT-TVISGLLDATRVD--EAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
K + FT I G L A R D A DL + M G P + L++ L +
Sbjct: 501 -KDAGVEPSQFTLNCIYGCL-AERCDFVGALDLLKK-MRFYGFEPWIKHTTFLVKKLCEN 557
Query: 478 KRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY 537
R DA + +G T ++GL + ++ + D+ D Y
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 538 AAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
++K LC++ EA E+V G+ P + +YN +I+ C + M +
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 598 NGLNPDCVTWRIL 610
+ NPD +T+ L
Sbjct: 678 DEKNPDVITYTSL 690
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 130/347 (37%), Gaps = 9/347 (2%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A + D+ G P + Y +I G C G ++ K+ EM ++GVEP+ T + I
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNC-IY 516
Query: 186 GVLQER-DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
G L ER D G +L+ K+ E +K F LV LC G + + +++
Sbjct: 517 GCLAERCDFVGALDLLKKM---RFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVA 571
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+G L V ID L K + ++ G P + Y+ +I L K M
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
TY +++ C ++D+ + M E Y +
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M C + IT +I G CK G EAL ++M K
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM-EEKEM 750
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
PD + +++S L + ++ F +F R M G P V N ++
Sbjct: 751 EPDSAVYLSLVSSFLSSENINAGFGIF-REMVHKGRFPVSVDRNYML 796
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 8/263 (3%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
P ++H+ + LC++ R +A + G + + L+++ +
Sbjct: 542 PWIKHT-TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L R + G P ++ YH L+ C R +A +F +M ++G P V +Y ++I+G
Sbjct: 601 LFRD--ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
+C G I M E P+ +TY+ LI G+ G W M +
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA----SGRPSEAIFRWNEMKGK- 713
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
+ F L+ LC+ G+ E E+ + + VY ++ S +
Sbjct: 714 DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAG 773
Query: 272 ARIVYEMKKRGFVPSDVLYNYII 294
I EM +G P V NY++
Sbjct: 774 FGIFREMVHKGRFPVSVDRNYML 796
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 5/222 (2%)
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
+ +LK L ++ C +F I L +A VDEA +F RV P TYN
Sbjct: 122 NASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYN 181
Query: 469 ALIRGLYKLKRPNDAF--GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
L+ + K + M G D T T +++ C+ + E A S +++++
Sbjct: 182 CLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEIL 241
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
G D + ++ C+ G ++A + L + + N +Y +LI+
Sbjct: 242 -SRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRID 300
Query: 587 EAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+A+Q+ +M++ G+N D + +L I G + + L SL
Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVL--IGGLCKHKDLEMALSL 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ ALC + R EA F+ ++ G P T N ++ + + + + + +
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P ++ Y L+ C RP +A + +MK + PN +++ LI G C G G+A
Sbjct: 681 N--PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEA 738
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG----RELMCKLWERMSVEVESGVKV 217
F EM E +EP+S Y L+ L ++ G RE++ K +SV+ + V
Sbjct: 739 LVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAV 798
Query: 218 AAFANLVDSL 227
+ V+ L
Sbjct: 799 NVTSKFVEDL 808
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
TLN V++G+C++G +D+ +++LQDM F A DV S+ T+I+G + + A L
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKL-KN 297
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+M ++GL+P VVT+N LI G + + +A V+ M + + ++ TY ++ G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
E A F+ D++ D Y A++ GLC+ +A F+ EL + PN +++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
LI C +++ + M ++G +P+ T+ +L
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
RA ++ NT+I G C+ G + ALK L++M+ P+VV+F T+I G A ++ EA
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+F + N + P VTYN LI G + AF Y MV +GI D TY ++ G
Sbjct: 329 KVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
LC + +A F ++ + + ++ ++A++ G C N + ++ SG PN
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQ 620
++N+L++ C + A Q++REM + + D R +H++ ++ Q
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS---RTVHQVCNGLKHQ 496
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 16/325 (4%)
Query: 30 SSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---RSRTP 86
S+P + S+ T L +F A F G +P +CN ++ LL R
Sbjct: 166 STPRVFDSLFKTFAHL---KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA 222
Query: 87 LQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
L+ + +R ++ P+ + +M +C + + DM+ G VSY
Sbjct: 223 LRFYREMRRCKIS-----PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
TLI G+C G + A K+ + M +SG++PN +T++ LI G + L+ K++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA----SKVFGE 333
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
M V + L++ ++G FR E++ C G + + Y +I LCK
Sbjct: 334 MKA-VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
+ AA+ V E+ K VP+ ++ +I G + RG++ + T+
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 327 VLVEALCHVFDVDKAREVLKLMLRK 351
+LV A C D D A +VL+ M+R+
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRR 477
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 87 LQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
L + AL ++ K G P++V ++ L+ FC + +A ++F +MK PN V+Y
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
TLINGY G A + +++M+ +G++ + LTY+ LI G+ ++ + + +L +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
V S F+ L+ C + F + + + G E + ++ + C+
Sbjct: 408 NLVPNSS-----TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ GA++++ EM +R + + +GL G
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 4/291 (1%)
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
+ SL GR A R EM++ P+ N ++ G + G +G +
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 319 XXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXX 377
D +Y L+ C + A + LK M+ K G+ + +N +
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 378 XXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG 437
M + +T NT+ING+ + G + A + +DM+ D++++ +I G
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI-QRDILTYNALIFG 387
Query: 438 LLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGA 497
L + +A + EN L P T++ALI G K + F +Y SM+ G
Sbjct: 388 LCKQAKTRKAAQFVKELDKEN-LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
+ T+ ++V C + + A +++ S D+ + GL G
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
TLN V++G+C++G +D+ +++LQDM F A DV S+ T+I+G + + A L
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKL-KN 297
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+M ++GL+P VVT+N LI G + + +A V+ M + + ++ TY ++ G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
E A F+ D++ D Y A++ GLC+ +A F+ EL + PN +++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
LI C +++ + M ++G +P+ T+ +L
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
RA ++ NT+I G C+ G + ALK L++M+ P+VV+F T+I G A ++ EA
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+F + N + P VTYN LI G + AF Y MV +GI D TY ++ G
Sbjct: 329 KVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
LC + +A F ++ + + ++ ++A++ G C N + ++ SG PN
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQ 620
++N+L++ C + A Q++REM + + D R +H++ ++ Q
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS---RTVHQVCNGLKHQ 496
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 16/325 (4%)
Query: 30 SSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---RSRTP 86
S+P + S+ T L +F A F G +P +CN ++ LL R
Sbjct: 166 STPRVFDSLFKTFAHL---KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA 222
Query: 87 LQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
L+ + +R ++ P+ + +M +C + + DM+ G VSY
Sbjct: 223 LRFYREMRRCKIS-----PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
TLI G+C G + A K+ + M +SG++PN +T++ LI G + L+ K++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA----SKVFGE 333
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
M V + L++ ++G FR E++ C G + + Y +I LCK
Sbjct: 334 MKA-VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
+ AA+ V E+ K VP+ ++ +I G + RG++ + T+
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 327 VLVEALCHVFDVDKAREVLKLMLRK 351
+LV A C D D A +VL+ M+R+
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRR 477
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 87 LQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
L + AL ++ K G P++V ++ L+ FC + +A ++F +MK PN V+Y
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
TLINGY G A + +++M+ +G++ + LTY+ LI G+ ++ + + +L +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
V S F+ L+ C + F + + + G E + ++ + C+
Sbjct: 408 NLVPNSS-----TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ GA++++ EM +R + + +GL G
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 4/291 (1%)
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
+ SL GR A R EM++ P+ N ++ G + G +G +
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 319 XXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXX 377
D +Y L+ C + A + LK M+ K G+ + +N +
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 378 XXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG 437
M + +T NT+ING+ + G + A + +DM+ D++++ +I G
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI-QRDILTYNALIFG 387
Query: 438 LLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGA 497
L + +A + EN L P T++ALI G K + F +Y SM+ G
Sbjct: 388 LCKQAKTRKAAQFVKELDKEN-LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
+ T+ ++V C + + A +++ S D+ + GL G
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 204/482 (42%), Gaps = 58/482 (12%)
Query: 139 CPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRE 198
C V S T L+N G +A+ VF + E+G P+ ++Y+ L+
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAA------------ 89
Query: 199 LMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
M+V+ + G + I E+ G+ + + + +
Sbjct: 90 --------MTVQKQYG--------------------SISSIVSEVEQSGTKLDSIFFNAV 121
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
I++ + G A + + +MK+ G P+ YN +I G G R +
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 319 XXCD---HTYKVLVEALCHVFDVDKAREVLKLM----LRKEGVDKTRIYNIYLRAXXXXX 371
T+ VLV+A C V++A EV+K M +R + V I Y++
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+++ + + + T V+ G+C+ G V + L+ ++ M + A ++V F
Sbjct: 242 AESEVVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA-NLVVF 298
Query: 432 TTVISG---LLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
++I+G ++D +DE L M E ++ V+TY+ ++ A V+
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTL----MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 354
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
MV G+ D+ Y+I+ +G + ++A+ +I S + ++ ++ G C +G
Sbjct: 355 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNG 413
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ ++A ++ GVSPNI ++ L+ + +A ++++ M+ G+ P+ T+
Sbjct: 414 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 473
Query: 609 IL 610
+L
Sbjct: 474 LL 475
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 195/468 (41%), Gaps = 33/468 (7%)
Query: 79 RLLRSRTPLQTWALVRSL---------IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRI 129
R +RSRT L + R +A+ G PSL++Y L+ V ++ I
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 130 FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ 189
+++ G + + + +IN + G + DA + +M E G+ P + TY+ LI+G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 190 ERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
E EL+ + E +V+V G + F LV + C++ E + + +++ G
Sbjct: 163 AGKPERSSELLDLMLEEGNVDV--GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYE---MKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
+ V Y + + G A V E MK++ P+ ++ G ++G G
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCREGRVRDG 279
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
+ + L+ V D D EVL LM Y+ + A
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNA 339
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
M+++ + D + + G+ + +A ++L+ +++ P
Sbjct: 340 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE--SRP 397
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
+VV FTTVISG +D+A +F++ M + G+ P + T+ L+ G ++K+P A V
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNK-MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Query: 487 YSSMVSDGIGADSTTYTIIVE-----GLCD----------CDQIEEAK 519
M G+ +++T+ ++ E GL D C IE AK
Sbjct: 457 LQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAK 504
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 174/420 (41%), Gaps = 10/420 (2%)
Query: 195 GGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
GG+ CK VE S V + L++ L G +E + + L G +
Sbjct: 27 GGQYRFCK----SCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLIS 82
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y ++ ++ +Y + IV E+++ G + +N +I+ ++ G+ Q
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD---KTRIYNIYLRAXXXXX 371
TY L++ +++ E+L LML + VD R +N+ ++A
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG-SVDEALKVLQDMLMGKFCAPDVVS 430
M E R D +T NT+ + + G +V +V++ M+M + P+ +
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
V+ G RV + F R M E + +V +N+LI G ++ + V + M
Sbjct: 263 CGIVVGGYCREGRVRDGLR-FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
+ AD TY+ ++ +E+A + +++ D Y+ + KG R+
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+A L L+ PN+ + +I+ C +A ++ +M K G++P+ T+ L
Sbjct: 382 KKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 48/286 (16%)
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATR 443
+S + D I N VIN F ++G++++A++ L M +G P ++ T+I G A +
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG--LNPTTSTYNTLIKGYGIAGK 165
Query: 444 VDEAFDLFHRVMPENGLR--PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
+ + +L ++ E + P + T+N L++ K K+ +A+ V M G+ D+ T
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 502 YTIIVEGLCDCDQIE----EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFL 557
Y I C + E E++ V+ + ++ G CR G + F+
Sbjct: 226 YNTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 558 YELVDSGVSPNIFSYNILIN--------------------CACHLDLKS----------- 586
+ + V N+ +N LIN C D+ +
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 587 ----EAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSL 628
+A Q+ +EM K G+ PD + IL K G VR + + + L
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAK--GYVRAKEPKKAEEL 387
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
P+ RTC +++ R VR + + +LV ++ L++ F
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR--VEANLVVFNSLINGFVEVMDRDGID 315
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+ MK +V++Y+T++N + S G + A +VF EM+++GV+P++ YS+L +G
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Query: 188 LQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRI 239
++ ++ + EL+ L VES V F ++ C G ++ R+
Sbjct: 376 VRAKEPKKAEELLETLI------VESRPNVVIFTTVISGWCSNGSMDDAMRV 421
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+T ++A + +A Q F + +G PD ++L +R++ P + L+ +LIV
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 393
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
P++V + ++ +C DA R+F M G PN+ ++ TL+ GY V
Sbjct: 394 ESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 450
Query: 159 GDARKVFDEMLESGVEPNSLTYSVL 183
A +V M GV+P + T+ +L
Sbjct: 451 WKAEEVLQMMRGCGVKPENSTFLLL 475
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 125/304 (41%), Gaps = 21/304 (6%)
Query: 54 AHQCFSISLASGSV---PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
+ + + L G+V P+ RT NVL+ + + + W +V+ + + G P V Y
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM--EECGVRPDTVTY 226
Query: 111 HRLMDQFCVFRRPCDAHRIFFD---MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ + + A + MK + PN + ++ GYC G + D +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAK-PNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M E VE N + ++ LI G ++ D +G E++ L + +V+ + V ++ ++++
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT-LMKECNVKAD----VITYSTVMNAW 340
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
G+ + ++ +E+ G + Y + + A ++ + P+
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNV 399
Query: 288 VLYNYIIHGLTKDG---DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
V++ +I G +G D MR + T++ L+ V KA EV
Sbjct: 400 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI---KTFETLMWGYLEVKQPWKAEEV 456
Query: 345 LKLM 348
L++M
Sbjct: 457 LQMM 460
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 13/263 (4%)
Query: 38 IATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI 97
I + ALCD SE ++ L G P + A+L+ + +A + ++
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQ----YVYAKLISGFCEIGNYACMSEVL 271
Query: 98 ---VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+A F PS+ Y +++ C+ ++ +A+ IF ++K++G+ P+ V YTT+I G+C
Sbjct: 272 HTMIAWNHF-PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
G +G ARK++ EM++ G+ PN Y+V+I G + ++ L+ + M G
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI----SLVEAFYNEMLRNGYGG 386
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
++ ++ C G +E F I + + G + Y +I CK + ++
Sbjct: 387 TMLSC-NTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 275 VYEMKKRGFVPSDVLYNYIIHGL 297
E+K G PS + Y ++ L
Sbjct: 446 YKELKALGLKPSGMAYAALVRNL 468
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 153/374 (40%), Gaps = 16/374 (4%)
Query: 101 PGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
PG V + + L+D + A + F D G P + G + +
Sbjct: 111 PGPVSLNILFGALLDG-----KAVKAAKSFLD--TTGFKPEPTLLEQYVKCLSEEGLVEE 163
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A +V++ + + G+ + +T + ++ G L+ R L+ + WE VES
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLD-------RFWELHKEMVESEFDSERI 216
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
L+ +LC G +E + + ++ QG + VY ++I C++G Y + +++ M
Sbjct: 217 RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIA 276
Query: 281 RGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK 340
PS +Y II GL + + Y Y ++ C +
Sbjct: 277 WNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGS 336
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
AR++ M++K YN+ + ML + +++ NT+I
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
GFC G DEA ++ ++M P+ +++ +I G +V++ L+ + + GL
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETG-VTPNAITYNALIKGFCKENKVEKGLKLY-KELKALGL 454
Query: 461 RPCVVTYNALIRGL 474
+P + Y AL+R L
Sbjct: 455 KPSGMAYAALVRNL 468
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M+ES+ ++ I +I C G V E ++L+ L P + +ISG +
Sbjct: 206 MVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGL-DPGQYVYAKLISGFCEIG 262
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
++ H ++ N P + Y +I+GL K+ +A+ ++ ++ G D Y
Sbjct: 263 NYACMSEVLHTMIAWNHF-PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVY 321
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
T ++ G C+ + A+ W ++I + F Y ++ G + G + F E++
Sbjct: 322 TTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
+G + S N +I C EA++I + M + G+ P+ +T+ L K
Sbjct: 382 NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 156/391 (39%), Gaps = 45/391 (11%)
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
L G E + Q + L + G A + +K G S V N ++ G K
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
R ++ + L+ ALC DV + E+LK L K+G+D +
Sbjct: 196 LDRFWELHKEMVESEFD--SERIRCLIRALCDGGDVSEGYELLKQGL-KQGLDPGQ---- 248
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
Y+ A +I+GFC+ G+ +VL M+
Sbjct: 249 YVYA------------------------------KLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 423 FCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
P + + +I GL + EA+ +F + + + G P V Y +IRG +
Sbjct: 279 H-FPSMYIYQKIIKGLCMNKKQLEAYCIF-KNLKDKGYAPDRVVYTTMIRGFCEKGWLGS 336
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
A ++ M+ G+ + Y +++ G +I ++F+++++ ++K
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G C G +EA + ++GV+PN +YN LI C + + ++ +E+K GL P
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Query: 603 DCVTWRILHKIQGKVRKQTLSEYQSLSINYE 633
+ + L VR +S+ + S+N E
Sbjct: 457 SGMAYAAL------VRNLKMSDSVATSLNLE 481
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 155/365 (42%), Gaps = 7/365 (1%)
Query: 133 MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD 192
MK+R ++ ++T LI Y G +A F+ M + G P+ + +S++I + ++R
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 193 LEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
+ L +R +V + NLV CR G +E ++ +E+ G
Sbjct: 237 ASEAQSFFDSLKDRFEPDV------IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNV 290
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
Y +ID+LC+ G+ A + +M G P+ + +N ++ K G + Q
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
TY L+EA C +++ A +VL M++K+ +N R
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
M+E++C + +T N ++ F + S D LK+ ++M K P+V ++
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM-DDKEVEPNVNTYR 469
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
+++ + A+ LF ++ E L P + Y ++ L + + + M+
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Query: 493 DGIGA 497
G+ A
Sbjct: 530 KGLVA 534
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L+ + DVI ++ G+C+ G + EA KV ++M + P+V +++ VI L +
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI-EPNVYTYSIVIDALCRCGQ 305
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ A D+F ++ ++G P +T+N L+R K R VY+ M G D+ TY
Sbjct: 306 ISRAHDVFADML-DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
++E C + +E A + +I + + I + + + + N A +++++
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
PN +YNIL+ ++ +EM + P+ T+R+L
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLL 471
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 163/413 (39%), Gaps = 81/413 (19%)
Query: 52 SEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYH 111
SEA CF+ G VPD +++++ L R R + + SL K F P ++ Y
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL---KDRFEPDVIVYT 259
Query: 112 RLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES 171
L+ +C +A ++F +MK G PNV +Y+ +I+ C G I A VF +ML+S
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
G PN++T++ L+R V V++G R
Sbjct: 320 GCAPNAITFNNLMR-----------------------VHVKAG--------------RTE 342
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+V+ ++L C+ + + Y +I++ C+ A +++ M K+ + +N
Sbjct: 343 KVLQVYNQMKKLGCE---PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
I + K D ++ Y ++EA C
Sbjct: 400 TIFRYIEKKRDVNGAHRM---------------YSKMMEAKCE----------------- 427
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
T YNI +R M + + +V T ++ FC G + A
Sbjct: 428 ---PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 412 LKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL--RP 462
K+ ++M+ K P + + V++ L A ++ + +L + M + GL RP
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEK-MIQKGLVARP 536
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 139/352 (39%), Gaps = 4/352 (1%)
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ + F L+ R G +E + G + +++ + +I +L + R A
Sbjct: 184 ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+K R F P ++Y ++ G + G+ + +TY ++++ALC
Sbjct: 244 FDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
+ +A +V ML +N +R M + C D IT
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N +I C+ +++ A+KVL M+ K C + +F T+ + V+ A ++ ++
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKK-CEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M E P VTYN L+R K + + M + + TY ++V C
Sbjct: 422 M-EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGH 480
Query: 515 IEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGV 565
A + +++ + + +Y +L L R+G + + +++ G+
Sbjct: 481 WNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 40/229 (17%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T +I + + G EA+ M C PD ++F+ VIS L R EA F
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ ++ P V+ Y L+RG + ++A V+ M GI + TY+I+++ LC C
Sbjct: 247 L--KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
QI A HD F +++DSG +PN ++N
Sbjct: 305 QISRA-------------HDVFA----------------------DMLDSGCAPNAITFN 329
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTL 622
L+ + Q+ +MKK G PD +T+ L I+ R + L
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL--IEAHCRDENL 376
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLL---ARLLRSRTPLQTWAL 92
++ + + ALC + S AH F+ L SG P+ T N L+ + R+ LQ +
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 93 VRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGY 152
++ L G P + Y+ L++ C +A ++ M + N ++ T+
Sbjct: 351 MKKL-----GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM-SVEV 211
+ A +++ +M+E+ EPN++TY++L+R + + +++ K+ + M EV
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK----STDMVLKMKKEMDDKEV 461
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHG 270
E V + LV C G +N +++ +E+ + L + +Y ++ L + G+
Sbjct: 462 EPNVN--TYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519
Query: 271 AARIVYEMKKRGFV 284
+V +M ++G V
Sbjct: 520 HEELVEKMIQKGLV 533
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRK-EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
++ ++A C +D A M R +G +YN + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ + + DV T N +ING+C++ D AL + ++M K C P+VVSF T+I G L + +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREM-KEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
++E + + ++ E G R T L+ GL + R +DA G+ +++ + Y
Sbjct: 279 IEEGVKMAYEMI-ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY-AAILKGLCRSGNFNEACHFLYELVD 562
+VE LC ++ A + +W G F+ +++GL +SG +A F+ ++++
Sbjct: 338 SLVEKLCGENKAVRAMEMMEE-LWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTL 622
+G+ P+ ++N+L+ C D ++A ++ G PD T+ +L + G ++
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL--VSGFTKEGRR 454
Query: 623 SEYQSLSINYEGQDM 637
E + L +DM
Sbjct: 455 KEGEVLVNEMLDKDM 469
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 152/373 (40%), Gaps = 20/373 (5%)
Query: 219 AFANLVDSLCREGFFNEVFRI-----AEELPCQGSLAE----EVVYGQMIDSLCKVGRYH 269
+F + SL F++++R+ A PC + E ++ ID+ C+ R
Sbjct: 115 SFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCR-ARKM 173
Query: 270 GAARIVYEMKKRGF--VPSDVLYNYIIHGLTKDGD---CMRGYQXXXXXXXXXXXXCDHT 324
A + ++ KR P+ +YN +++G K GD +R YQ T
Sbjct: 174 DYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVC---T 230
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
+ +L+ C D A ++ + M K +N +R M+
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
E CR T +++G C+ G VD+A ++ D+L K P + +++ L +
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL-NKRVLPSEFDYGSLVEKLCGENKA 349
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
A ++ + + G PC + L+ GL K R A G M++ GI DS T+ +
Sbjct: 350 VRAMEMMEELW-KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNL 408
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
++ LC D +A D Y ++ G + G E + E++D
Sbjct: 409 LLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKD 468
Query: 565 VSPNIFSYNILIN 577
+ P+IF+YN L++
Sbjct: 469 MLPDIFTYNRLMD 481
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 13/285 (4%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A R + M P+V ++ LINGYC A +F EM E G EPN ++++ LIR
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
G L +E G ++ ++ +E+ A LVD LCREG ++ + +L
Sbjct: 272 GFLSSGKIEEGVKMAYEM-----IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLN 326
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
+ L E YG +++ LC + A ++ E+ K+G P + ++ GL K G +
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALC---HVFDVDKAREVLKLMLRKEGVDKTR-IYN 361
T+ +L+ LC H D ++ L+L+ +G + Y+
Sbjct: 387 ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANR----LRLLASSKGYEPDETTYH 442
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
+ + ML+ D+ T N +++G TG
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 9/331 (2%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNR--GHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ +D +C R+ D + FD R PNV Y T++NGY G + A + +
Sbjct: 160 FRSAIDAYCRARK-MDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M + +P+ T+++LI G + + +L ++ E+ V +F L+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK-----GCEPNVVSFNTLIRGF 273
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
G E ++A E+ G E ++D LC+ GR A +V ++ + +PS+
Sbjct: 274 LSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
Y ++ L + +R + C LVE L +KA ++
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEK 393
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M+ + + +N+ LR D T + +++GF K G
Sbjct: 394 MMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGR 453
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
E +VL + ++ K PD+ ++ ++ GL
Sbjct: 454 RKEG-EVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 142/348 (40%), Gaps = 37/348 (10%)
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
++ M ++ V + +V+ + G ++ R + + + + + + +I+ C
Sbjct: 180 FDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYC 239
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
+ ++ A + EMK++G P+ V +N +I G G G + +
Sbjct: 240 RSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEA 299
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
T ++LV+ LC VD A ++ +L K +
Sbjct: 300 TCEILVDGLCREGRVDDACGLVLDLLNKR------------------------------V 329
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L S+ +++ C A++++++ L K P ++ TT++ GL + R
Sbjct: 330 LPSE-----FDYGSLVEKLCGENKAVRAMEMMEE-LWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
++A ++M G+ P VT+N L+R L DA + S G D TTY
Sbjct: 384 TEKASGFMEKMM-NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYH 442
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
++V G + +E + ++++ + D F Y ++ GL +G F+
Sbjct: 443 VLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P + ++ L++ +C + A +F +MK +G PNVVS+ TLI G+ S G I + K+
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
EM+E G + T +L+ G+ +E ++ L+ L + + E + +LV
Sbjct: 286 AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD-----YGSLV 340
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
+ LC E + EEL +G + +++ L K GR A+ + +M G +
Sbjct: 341 EKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL 400
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
P V +N ++ L + + TY VLV + +
Sbjct: 401 PDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVL 460
Query: 345 LKLMLRKEGVDKTRIYN 361
+ ML K+ + YN
Sbjct: 461 VNEMLDKDMLPDIFTYN 477
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 42/234 (17%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
TC +L+ L R LV L+ + +PS +Y L+++ C + A +
Sbjct: 300 TCEILVDGLCREGRVDDACGLVLDLLNKR--VLPSEFDYGSLVEKLCGENKAVRAMEMME 357
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
++ +G P ++ TTL+ G G A ++M+ +G+ P+S+T+++L+R
Sbjct: 358 ELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR------ 411
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
LC + R+ +G +
Sbjct: 412 ----------------------------------DLCSSDHSTDANRLRLLASSKGYEPD 437
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
E Y ++ K GR +V EM + +P YN ++ GL+ G R
Sbjct: 438 ETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+ + LC N+ A + G P C L+ L +S + + ++
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
A G +P V ++ L+ C DA+R+ ++G+ P+ +Y L++G+ G
Sbjct: 397 A--GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRR 454
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+ + +EML+ + P+ TY+ L+ G+
Sbjct: 455 KEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 2/288 (0%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
HTY +V L + ++L M+R T YN + +
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E+ C D +T T+I+ K G +D A+ + Q M +PD +++ +I+ L A
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL-SPDTFTYSVIINCLGKAG 478
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ A LF ++ + G P +VT+N +I K + A +Y M + G D TY
Sbjct: 479 HLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+I++E L C +EEA+ + ++ + + D VY ++ ++GN ++A + ++
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+G+ PN+ + N L++ + SEAY +++ M GL+P T+ +L
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 141/344 (40%), Gaps = 45/344 (13%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+PGF Y ++ ++ + +++ +M G PN V+Y LI+ Y +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A VF++M E+G EP+ +TY LI G ++ +++RM E+G+
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLI----DIHAKAGFLDIAMDMYQRMQ---EAGLSPDT 464
Query: 220 F--ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
F + +++ L + G R+ E+ QG V + MI K Y A ++ +
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M+ GF P V TY +++E L H
Sbjct: 525 MQNAGFQPDKV-----------------------------------TYSIVMEVLGHCGF 549
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+++A V M RK V +Y + + +ML++ R +V T N+
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
+++ F + + EA +LQ ML P + ++T ++S DA
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGL-HPSLQTYTLLLSCCTDA 652
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 7/281 (2%)
Query: 69 DHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
D T ++ L R++ + L+ ++ + G P+ V Y+RL+ + +A
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMV--RDGCKPNTVTYNRLIHSYGRANYLKEAMN 415
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F M+ G P+ V+Y TLI+ + G + A ++ M E+G+ P++ TYSV+I +
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLG 475
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
+ L L C++ V + F ++ + + ++ ++ G
Sbjct: 476 KAGHLPAAHRLFCEM-----VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
++V Y +++ L G A + EM+++ +VP + +Y ++ K G+ + +Q
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
T L+ V + +A +L+ ML
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ D T T++ + E K+L +M+ C P+ V++ +I A + EA
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKEAM 414
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
++F++ M E G P VTY LI K + A +Y M G+ D+ TY++I+
Sbjct: 415 NVFNQ-MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL-CRSGNFNEACHFLYELVDSGVSP 567
L + A + +++ G N V I+ L ++ N+ A ++ ++G P
Sbjct: 474 LGKAGHLPAAHRLFCEMVG-QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKV 617
+ +Y+I++ H EA + EM++ PD + +L + GK
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 2/293 (0%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +V +L R F E+ ++ +E+ G V Y ++I S + A + +M+
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ G P V Y +I K G TY V++ L +
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A + M+ + +NI + M + + D +T + V+
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G ++EA V +M K PD + ++ A VD+A+ +++ M + G
Sbjct: 542 EVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ-WYQAMLQAG 599
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
LRP V T N+L+ ++ R ++A+ + SM++ G+ TYT+++ D
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%)
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A F+ + + G + TY ++ L + K+ + + MV DG ++ TY ++
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ ++EA + ++ + D Y ++ ++G + A + ++G+S
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS 461
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
P+ F+Y+++INC A+++ EM G P+ VT+ I+ + K R
Sbjct: 462 PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR 513
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 176/411 (42%), Gaps = 22/411 (5%)
Query: 50 RFSEAHQCFSISLASGSVPDHRTCNVLLARL---LRSRTPLQTWALVRSLIVAKPGFVPS 106
R+ A + F+ ++ G P T N++L LR T L+ + +++ G P
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT-----RGISPD 289
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
++ +++ FC F++ +A ++F +MK P+VVSYTT+I GY +V + D ++F+
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
EM SG+EPN+ TYS L+ G+ + + ++ + + ++ + F L+ S
Sbjct: 350 EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI----FLKLLVS 405
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV-- 284
+ G + + + AE YG +I++ CK Y+ A +++ + ++ +
Sbjct: 406 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR 465
Query: 285 PSDVL------YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
D L YN II L +G + D L+ +
Sbjct: 466 HQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNP 524
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
D + E+LK+M R+ ++ Y + +++ SM+E D +V
Sbjct: 525 DSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSV 584
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF-TTVISGLLDATRVDEAF 448
I + G V A +V+ M+ D + ++ LL V+EA
Sbjct: 585 IESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEAL 635
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSM 383
+ VL+E+ V ++ ++ + M + GV++T + YN + M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKM-KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ T N ++ GF + ++ AL+ +DM + +PD +F T+I+G +
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM-KTRGISPDDATFNTMINGFCRFKK 305
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+DEA LF M N + P VV+Y +I+G + R +D ++ M S GI ++TTY+
Sbjct: 306 MDEAEKLFVE-MKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYS 364
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPS-GIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
++ GLCD ++ EAK+ +++ DN ++ +L ++G+ A L +
Sbjct: 365 TLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMAT 424
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAY 589
V Y +LI C K+ AY
Sbjct: 425 LNVPAEAGHYGVLIENQC----KASAY 447
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 173/440 (39%), Gaps = 25/440 (5%)
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+IF MK+ G + SY +L G A++ F++M+ GVEP TY++++ G
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 188 LQERDLEGGRELMCKLWERMSVEVESGVKV--AAFANLVDSLCREGFFNEVFRIAEELPC 245
LE + +E M G+ A F +++ CR +E ++ E+
Sbjct: 266 FLSLRLETA----LRFFEDMKTR---GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
V Y MI V R RI EM+ G P+ Y+ ++ GL G +
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 306 GYQXXXXXXXXXXXXCDHT--YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
D++ K+LV + D+ A EVLK M + Y +
Sbjct: 379 AKNILKNMMAKHIAPKDNSIFLKLLV-SQSKAGDMAAATEVLKAMATLNVPAEAGHYGVL 437
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQC---RADVITL-----NTVINGFCKTGSVDEALKVL 415
+ +++E + D + + N +I C G +A +VL
Sbjct: 438 IENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA-EVL 496
Query: 416 QDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
LM K D + +I G D ++++ ++M G+ Y LI+
Sbjct: 497 FRQLM-KRGVQDQDALNNLIRGHAKEGNPDSSYEIL-KIMSRRGVPRESNAYELLIKSYM 554
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS-GIHDN 534
P DA SMV DG DS+ + ++E L + +++ A +I + GI DN
Sbjct: 555 SKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDN 614
Query: 535 F-VYAAILKGLCRSGNFNEA 553
+ A IL+ L G+ EA
Sbjct: 615 MDLIAKILEALLMRGHVEEA 634
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 180/450 (40%), Gaps = 25/450 (5%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
I DM +G + + LI Y G + ++ K+F +M + GVE +Y+ L + +L
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFF-----NEVFRIAEEL 243
+ GR +M K + + V GV+ +L GFF R E++
Sbjct: 232 RR-----GRYMMAKRY--FNKMVSEGVEPTRHTY---NLMLWGFFLSLRLETALRFFEDM 281
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+G ++ + MI+ C+ + A ++ EMK PS V Y +I G
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK-TRIYNI 362
G + TY L+ LC + +A+ +LK M+ K K I+
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
L + +M A+ +I CK + + A+K+L ++ +
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 423 FC-------APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
+ ++ +I L + + +A LF ++M + G++ N LIRG
Sbjct: 462 IILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLM-KRGVQDQDA-LNNLIRGHA 519
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF 535
K P+ ++ + M G+ +S Y ++++ + +AK+ ++ + D+
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSS 579
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGV 565
++ ++++ L G A + ++D V
Sbjct: 580 LFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
F +I A V E+ +F + M + G+ + +YN+L + + + R A ++ M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQK-MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
VS+G+ TY +++ G ++E A F+ D+ D+ + ++ G CR
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+EA E+ + + P++ SY +I +D + +I EM+ +G+ P+ T+ L
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 398 VINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I + K G V E++K+ Q M +G + S+ ++ +L R A F++++
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLG--VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
E G+ P TYN ++ G + R A + M + GI D T+ ++ G C +++
Sbjct: 249 E-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 517 EAKSFWHDV----IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
EA+ + ++ I PS + Y ++KG ++ E+ SG+ PN +Y
Sbjct: 308 EAEKLFVEMKGNKIGPSVVS----YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNP 602
+ L+ C EA I++ M + P
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 146/398 (36%), Gaps = 12/398 (3%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F L++S + G E +I +++ G Y + + + GRY A R +M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
G P+ YN ++ G + D T+ ++ C +D
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+A ++ M + Y ++ M S + T +T++
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAP-DVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
G C G + EA +L++M M K AP D F ++ A + A ++ + M
Sbjct: 368 PGLCDAGKMVEAKNILKNM-MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL-KAMATL 425
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV--------SDGIGADSTTYTIIVEGLC 510
+ Y LI K N A + +++ D + + + Y I+E LC
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ Q +A+ + ++ G+ D +++G + GN + + L + GV
Sbjct: 486 NNGQTAKAEVLFRQLM-KRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESN 544
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+Y +LI +A + M ++G PD +R
Sbjct: 545 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFR 582
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ D T N +I+G ++G D+ALK+ +M+ K P V+F T+I GL +RV EA
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKV-KPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+ H ++ G+RP V Y +LI+ L ++ + AF + I D+ Y+ ++
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
L + E ++ D Y ++ G C + A L E+V+ G+ P+
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ SYN+++ + EA + +M + G +PD +++RI+
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 117/285 (41%), Gaps = 49/285 (17%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+ +Y LI+G G DA K+FDEM++ V+P +T+ LI G+ ++ ++ ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 200 ---MCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
M K++ GV+ V +A+L+ +LC+ G + F++ +E + +
Sbjct: 210 KHDMLKVY---------GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAI 260
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y +I SL K GR + + I+ EM ++G P V YN +I+G
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING------------------ 302
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
C D + A VL M+ K YN+ L
Sbjct: 303 -----------------FCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML 419
M C D ++ V +G C+ +EA +L +ML
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPN 481
+F PD ++ +I G + D+A LF M + ++P VT+ LI GL K R
Sbjct: 146 EFGKPDACTYNILIHGCSQSGCFDDALKLFDE-MVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 482 DAFGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAI 540
+A + M+ G+ Y +++ LC ++ A + D +Y+ +
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ L ++G NE L E+ + G P+ +YN+LIN C + A +++ EM + GL
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 601 NPDCVTWRILHKIQGKVRKQTLSEY 625
PD +++ ++ + +++K + Y
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATY 349
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 6/228 (2%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES-GVEPNSLTYSVL 183
DA ++F +M + P V++ TLI+G C + +A K+ +ML+ GV P Y+ L
Sbjct: 170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASL 229
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
I+ + Q +L +L + +E + V A ++ L+ SL + G NEV I EE+
Sbjct: 230 IKALCQIGELSFAFKLKDEAYEG-----KIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+G + V Y +I+ C A R++ EM ++G P + YN I+ +
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
+Y+++ + LC ++A +L ML K
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 136/343 (39%), Gaps = 54/343 (15%)
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA--FANLVDSLCREG 231
+P++ TY++LI G Q G + KL++ M V+ VK F L+ LC++
Sbjct: 149 KPDACTYNILIHGCSQ----SGCFDDALKLFDEM---VKKKVKPTGVTFGTLIHGLCKDS 201
Query: 232 FFNEVFRIAEE-LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
E ++ + L G +Y +I +LC++G A ++ E + +Y
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 291 NYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH---TYKVLVEALCHVFDVDKAREVLKL 347
+ +I L K G R + C TY VL+ C D + A VL
Sbjct: 262 STLISSLIKAG---RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD- 317
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M+E + DVI+ N ++ F +
Sbjct: 318 ----------------------------------EMVEKGLKPDVISYNMILGVFFRIKK 343
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
+EA + +DM + C+PD +S+ V GL + + +EA + ++ + G +P
Sbjct: 344 WEEATYLFEDMPR-RGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK-GYKPRRDRL 401
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
++ L + + V SS+ GI D+ +++++ +C
Sbjct: 402 EGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMC 443
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 16/233 (6%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
H A+ + ALC S A + + D + L++ L+++ + ++
Sbjct: 224 HIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEE 283
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+ ++ G P V Y+ L++ FCV A+R+ +M +G P+V+SY ++ + +
Sbjct: 284 M--SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRI 341
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGR----ELMCKLWERMSVEV 211
+A +F++M G P++L+Y ++ G+ + E E++ K ++ +
Sbjct: 342 KKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRL 401
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
E + LC G + ++ L +G + V+ MI ++CK
Sbjct: 402 E---------GFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCK 444
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 195/475 (41%), Gaps = 88/475 (18%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P V LI C VG I +ARK+FD + E V +T++ +I G ++ D+ REL
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGYIKLGDMREAREL 99
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+ V+S V + +V R + + +E+P + V + MI
Sbjct: 100 FDR--------VDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMI 147
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG---DCMRGYQXXXXXXXX 316
D + GR A + EM +R V +N ++ L + G + M ++
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNIVS----WNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
++ +V+ L VD+AR + M +
Sbjct: 204 -------SWTAMVDGLAKNGKVDEARRLFDCMPER------------------------- 231
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
++I+ N +I G+ + +DEA ++ Q M D S+ T+I+
Sbjct: 232 --------------NIISWNAMITGYAQNNRIDEADQLFQVM-----PERDFASWNTMIT 272
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG-I 495
G + +++A LF R MPE V+++ +I G + K +A V+S M+ DG +
Sbjct: 273 GFIRNREMNKACGLFDR-MPEKN----VISWTTMITGYVENKENEEALNVFSKMLRDGSV 327
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEAC 554
+ TY I+ D + E + H +I S N V +A+L +SG A
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQI-HQLISKSVHQKNEIVTSALLNMYSKSGELIAA- 385
Query: 555 HFLYELVDSGV--SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
++ D+G+ ++ S+N +I H EA ++ +M+K+G P VT+
Sbjct: 386 ---RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 203/501 (40%), Gaps = 72/501 (14%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG-VEPNSLTYSVLI 184
A +F +M R NVVS+ T+I+GY G I A ++FDEM E V NS+ +++
Sbjct: 128 AEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQ 183
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
RG + E L+ERM V ++ +VD L + G +E R+ + +P
Sbjct: 184 RGRIDE---------AMNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+ ++ + MI + R A ++ M +R F +N +I G ++ +
Sbjct: 230 ERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMN 281
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIY 363
+ ++ ++ + ++A V MLR V Y
Sbjct: 282 KACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
L A + +S + + I + ++N + K+G + A K+ + G
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN---GLV 394
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C D++S+ ++I+ EA +++++ M ++G +P VTY L+
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQ-MRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Query: 484 FGVYSSMVSD-GIGADSTTYTIIVEGLC-------------DCDQIEEAKSFWHDVIWPS 529
+ +V D + YT +V+ LC +CD ++SF+ ++
Sbjct: 454 MEFFKDLVRDESLPLREEHYTCLVD-LCGRAGRLKDVTNFINCDDARLSRSFYGAILSAC 512
Query: 530 GIHDNFVYAA-ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+H+ A ++K + +G+ + + L NI++ N + EA
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLM--------SNIYAAN---------GKREEA 555
Query: 589 YQIVREMKKNGL--NPDCVTW 607
++ +MK+ GL P C +W
Sbjct: 556 AEMRMKMKEKGLKKQPGC-SW 575
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 219/546 (40%), Gaps = 23/546 (4%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCF-SISLASGSVPDHRTCNVLLARL 80
F T SPS+ + + L L R AH F + G PD T N L+
Sbjct: 161 FQTMKQMGISPSVL-TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 81 LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGH-- 138
++ + + + + + + P +V Y+ ++D C + AH + M +
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCN--PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDV 277
Query: 139 CPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRE 198
PNVVSYTTL+ GYC I +A VF +ML G++PN++TY+ LI+G+ + + ++
Sbjct: 278 HPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKD 337
Query: 199 LMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
++ + + F L+ + C G + ++ +E+ + Y +
Sbjct: 338 ILIGGNDAFTTFAPDA---CTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVL 394
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFV-------PSDVLYNYIIHGLTKDGDCMRGYQXXX 311
I +LC + A + E+ ++ + P YN + L +G + +
Sbjct: 395 IRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR 454
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
+YK L+ C A E+L LMLR+E V Y + +
Sbjct: 455 QLMKRGVQD-PPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
ML S T ++V+ K +E+ L +++ K ++
Sbjct: 514 EALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESF-CLVTLMLEKRIRQNIDLS 572
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
T V+ L + + ++AF L R++ +NG +V L+ L + ++ DA + +
Sbjct: 573 TQVVRLLFSSAQKEKAF-LIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCL 628
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
D T ++EGLC + EA S +++++ G H +L+ +
Sbjct: 629 EKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELV-ELGNHQQLSCHVVLRNALEAAGKW 687
Query: 552 EACHFL 557
E F+
Sbjct: 688 EELQFV 693
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/565 (19%), Positives = 209/565 (36%), Gaps = 154/565 (27%)
Query: 138 HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGR 197
H +S TT++ + D + FD + G ++ +++ + + R+L R
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 198 ELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQ 257
+ + R + V+ ++ F +L+ S G F E ++ + + G + +
Sbjct: 121 NFLFSIERRSNGCVK--LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 258 MIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXX 317
++ L K GR A + EM++ +G+T D
Sbjct: 179 LLSILLKRGRTGMAHDLFDEMRR-------------TYGVTPDS---------------- 209
Query: 318 XXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXX 377
+T+ L+ C VD+A + K M +Y+
Sbjct: 210 -----YTFNTLINGFCKNSMVDEAFRIFKDM---------ELYH---------------- 239
Query: 378 XXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM-GKFCAPDVVSFTTVIS 436
C DV+T NT+I+G C+ G V A VL ML P+VVS+TT++
Sbjct: 240 ----------CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR 289
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKR----------PNDAF-- 484
G +DEA +FH ++ GL+P VTYN LI+GL + R NDAF
Sbjct: 290 GYCMKQEIDEAVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT 348
Query: 485 -------------------------GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
V+ M++ + DS +Y++++ LC ++ + A+
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 520 SFWHDV-----------------------------------------IWPSGIHDNFVYA 538
+ ++++ + G+ D Y
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYK 468
Query: 539 AILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
++ G CR G F A L ++ P++ +Y +LI+ + A+ ++ M ++
Sbjct: 469 TLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS 528
Query: 599 GLNPDCVTWRILHKIQGKVRKQTLS 623
P T+ H + ++ K+ +
Sbjct: 529 SYLPVATTF---HSVLAELAKRKFA 550
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 205/521 (39%), Gaps = 62/521 (11%)
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES-GVEPNSLTYSVLIRG 186
++F MK G P+V+++ +L++ G G A +FDEM + GV P+S T++ LI G
Sbjct: 159 KLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+ ++ ++++ M + V + ++D LCR G + + +
Sbjct: 219 FCKNSMVDEA----FRIFKDMEL-YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 247 GSLAEE--VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG--D 302
+ V Y ++ C A + ++M RG P+ V YN +I GL++ D
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 333
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
++ T+ +L++A C +D A +V + ML + + Y++
Sbjct: 334 EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 363 YLRAXXXXXXXXXXXXXXXSMLES-------QCR-------------------------- 389
+R + E +C+
Sbjct: 394 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
Query: 390 --------ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
D + T+I G C+ G A ++L ML +F PD+ ++ +I GLL
Sbjct: 454 RQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREF-VPDLETYELLIDGLLKI 512
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
A D R++ + L P T+++++ L K K N++F + + M+ I +
Sbjct: 513 GEALLAHDTLQRMLRSSYL-PVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDL 571
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN---FVYAAILKGLCRSGNFNEACHFLY 558
T +V L Q E+A + ++DN +L LC + +A +
Sbjct: 572 STQVVRLLFSSAQKEKA------FLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVL 625
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
++ +I + N +I C SEA+ + E+ + G
Sbjct: 626 FCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
+++ G+C+ G + EA VL M F PD+V +T ++SG +A ++ +A+DL R
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGF-EPDIVDYTNLLSGYANAGKMADAYDLL-RD 312
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M G P Y LI+ L K+ R +A V+ M AD TYT +V G C +
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
I++ D+I + Y I+ + +F E + ++ P+I YN+
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+I AC L EA ++ EM++NGL+P T+ I+
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 186/462 (40%), Gaps = 73/462 (15%)
Query: 77 LARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDA----HRIF-F 131
+ R SR P AL S + +PG + ++N R DA +R F +
Sbjct: 89 ILRKFHSRVPKLELALNESGVELRPGLIERVLN------------RCGDAGNLGYRFFVW 136
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG---VEPNSLTYSVLIRGVL 188
K +C ++ Y +++ + G + +EM + +EP + VL++
Sbjct: 137 AAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFA 194
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL----P 244
++ E++ ++ + E + V F L+D+LC+ G + ++ E++ P
Sbjct: 195 SADMVKKAIEVLDEM-PKFGFEPDEYV----FGCLLDALCKHGSVKDAAKLFEDMRMRFP 249
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
++YG C+VG+ A ++ +M + GF P V Y ++ G G
Sbjct: 250 VNLRYFTSLLYG-----WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
Y + Y VL++ALC V D+ E +K+ +
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKV---DRMEEAMKVFV--------------- 346
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M +C ADV+T +++GFCK G +D+ VL DM+ K
Sbjct: 347 -----------------EMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI-KKGL 388
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
P +++ ++ +E +L + M + P + YN +IR KL +A
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEK-MRQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
+++ M +G+ T+ I++ GL + EA + +++
Sbjct: 448 RLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
A V M G D + +++ LC +++A + D+ ++ + + ++L
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY-FTSLLY 260
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G CR G EA + L ++ ++G P+I Y L++ + ++AY ++R+M++ G P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 603 DCVTWRILHKIQGKVRKQTLSEYQSLSINYE 633
+ + +L IQ + + E + + E
Sbjct: 321 NANCYTVL--IQALCKVDRMEEAMKVFVEME 349
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
+M E C D+ + NT+++ CK+ V++A ++ + L G+F D V++ +++G
Sbjct: 151 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSV-DTVTYNVILNGWCLI 208
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R +A ++ + M E G+ P + TYN +++G ++ + A+ + M D T
Sbjct: 209 KRTPKALEVL-KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT +V G +I+ A++ + ++I + Y A+++ LC+ N A E+V
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G PN+ +YN+LI H S ++++ M+ G P+ T+ ++
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 152/371 (40%), Gaps = 36/371 (9%)
Query: 24 TTIATPSSPSLQHSI----------ATTLHALCDSNRFSEAHQCFSISLA---SGSVPDH 70
+T TP +P+L +S+ A D++ H S LA + + H
Sbjct: 48 STKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLH 107
Query: 71 RTCNVLLARL--LRSRTPLQTWALV--RSLIVAKP-------------GFVPSLVNYHRL 113
T L+ R+ LR +T+A+V R KP G L +++ +
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 114 MDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV 173
+D C +R A+ +F ++ R + V+Y ++NG+C + A +V EM+E G+
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 174 EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFF 233
PN TY+ +++G + + E ++ +R + + V + +V G
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR-----DCEIDVVTYTTVVHGFGVAGEI 281
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
+ +E+ +G L Y MI LCK A + EM +RG+ P+ YN +
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
I GL G+ RG + TY +++ +V+KA + + M +
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDC 401
Query: 354 VDKTRIYNIYL 364
+ YNI +
Sbjct: 402 LPNLDTYNILI 412
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 11/242 (4%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L + D +T N ++NG+C +AL+VL++M+ + P++ ++ T++ G A +
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV-ERGINPNLTTYNTMLKGFFRAGQ 245
Query: 444 VDEAFDLFHRVMPENGLRPC---VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
+ A++ F E R C VVTY ++ G A V+ M+ +G+
Sbjct: 246 IRHAWEFF----LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
TY +++ LC D +E A + +++ + Y +++GL +G F+ + +
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK-VRK 619
+ G PN +YN++I +A + +M P+ T+ IL I G VRK
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL--ISGMFVRK 419
Query: 620 QT 621
++
Sbjct: 420 RS 421
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 3/266 (1%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+A+F ++D LC+ + + + L + S+ + V Y +++ C + R A ++
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
EM +RG P+ YN ++ G + G ++ TY +V
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++ +AR V M+R+ + YN ++ M+ +V T N
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I G G +++Q M + C P+ ++ +I + + V++A LF ++
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRM-ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPND 482
+ L P + TYN LI G++ KR D
Sbjct: 399 GDCL-PNLDTYNILISGMFVRKRSED 423
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 186/488 (38%), Gaps = 78/488 (15%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
L++ CS +A K+ DE+ G Y++ IR +++ L + + K+
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
E+E V + ++V L +E + V+ I E+ +G + + CK G
Sbjct: 352 GCELE----VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
A + + GF P+ + YNY+IH L + + Y T+
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
L ALC D ARE++ ++ + K RI +
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPK-RI--------------------------AG 500
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
C+ +I+ C G V++AL ++ ++ FT++I G + R D A
Sbjct: 501 CK--------IISALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIA 551
Query: 448 FDLFHRVMPENGLRPC------------------------------------VVTYNALI 471
L R M E G P V YN I
Sbjct: 552 AKLIIR-MQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFI 610
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI 531
G +P A VY M DGI + ++++ ++I +A F+HD + G
Sbjct: 611 EGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHD-LREQGK 669
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+Y ++ GLC++ ++A HFL E+ G+ P+I Y + I C+ + EA +
Sbjct: 670 TKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL 729
Query: 592 VREMKKNG 599
V E +K+G
Sbjct: 730 VNEFRKSG 737
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 120/623 (19%), Positives = 230/623 (36%), Gaps = 88/623 (14%)
Query: 29 PSSPS-LQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPL 87
P+ P+ + + ALC +F EA + G+V R N+ + L+++ L
Sbjct: 279 PNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKA-GFL 337
Query: 88 QTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTT 147
A I G + Y+ ++ Q + I +M RG PN +
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
+ +C G + +A +++ E G P +++Y+ LI + +E +++ +
Sbjct: 398 ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL-----KG 452
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+++ + F+ L ++LC +G + + + L + + ++I +LC VG+
Sbjct: 453 AIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGK 512
Query: 268 YHG-----------------------------------AARIVYEMKKRGFVPSDVLYNY 292
AA+++ M+++G+ P+ LY
Sbjct: 513 VEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRN 572
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH---TYKVLVEALCHVFDVDKAREVLKLML 349
+I + + + + +H Y + +E AR V +M
Sbjct: 573 VIQCVCEMESGEKNF--FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMD 630
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
R +G+ T NI + L Q + +I G CK +D
Sbjct: 631 R-DGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLD 689
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
+A+ L++M G+ P + + I L + + DEA L + ++G R N
Sbjct: 690 DAMHFLEEM-KGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNE-FRKSGRRITAFIGNV 747
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
L+ K K GVY ++ T +E D+I E KS + S
Sbjct: 748 LLHNAMKSK------GVY----------EAWTRMRNIE-----DKIPEMKSLGELIGLFS 786
Query: 530 GIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
G D V L R E C+ L ++++YN+L+ ++ +AY
Sbjct: 787 GRIDMEV------ELKRLDEVIEKCYPL----------DMYTYNMLLRMIV-MNQAEDAY 829
Query: 590 QIVREMKKNGLNPDCVTWRILHK 612
++V + + G P+ T IL +
Sbjct: 830 EMVERIARRGYVPNERTDMILER 852
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 128/337 (37%), Gaps = 6/337 (1%)
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
I ++ RGFV + V ++ ++ K G C +LV+ALC
Sbjct: 239 IFDQISVRGFVCA-VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALC 297
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX--XXXXXXXXXXXSMLESQCRAD 391
+A ++L + V+ R YNI++RA S LE C +
Sbjct: 298 SKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEG-CELE 356
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V N+++ K ++D +L +M++ + +P+ + + A VDEA +L+
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMV-RGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R E G P ++YN LI L + A+ V + G T++ + LC
Sbjct: 416 -RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCW 474
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ + A+ + I+ LC G +A SGV +
Sbjct: 475 KGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKM 534
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ LI + L A +++ M++ G P +R
Sbjct: 535 FTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYR 571
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
CR + + ++ G+ G D AL+ +M +F D+ SF + LL+A ++
Sbjct: 178 CRHSLRLCDALVVGYAVAGRTDIALQHFGNM---RFRGLDLDSFGYHV--LLNALVEEKC 232
Query: 448 FDLFHRVMPENGLRP--CVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
FD F + + +R C VT++ L++ K + ++A +++ + + I+
Sbjct: 233 FDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGIL 292
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD-SG 564
V+ LC + +EA ++ ++ + Y ++ L ++G N FL ++ G
Sbjct: 293 VDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEG 352
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+F YN ++ + Y I+ EM G++P+ T
Sbjct: 353 CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT 394
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/504 (21%), Positives = 199/504 (39%), Gaps = 52/504 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G PS + L+ RR + ++ MK G P V Y +++ G A
Sbjct: 188 GRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLA 247
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
V+++ E G+ S T+ +L++G+ + +E E++ ++ E + V A+
Sbjct: 248 LAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLC-----KPDVFAYT 302
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++ +L EG + R+ +E+ + + YG ++ LCK GR + EMK +
Sbjct: 303 AMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
+ +Y +I G DG Y +++ LC V VDKA
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
++ ++ + E + D TL+ ++
Sbjct: 423 YKLFQVAI-----------------------------------EEELEPDFETLSPIMVA 447
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL--DATRVDEAFDLFHRVMPENG 459
+ + + VL+ + G+ P V + T LL D + A D+F+ ++ G
Sbjct: 448 YVVMNRLSDFSNVLERI--GELGYP-VSDYLTQFFKLLCADEEKNAMALDVFY-ILKTKG 503
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
V YN L+ LYK+ + ++ M G DS++Y+I + + ++ A
Sbjct: 504 -HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAAC 562
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL---VDSGVSPNIFSYNILI 576
SF +I S + Y ++ KGLC+ G + + E V+SG P F Y + +
Sbjct: 563 SFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTV 620
Query: 577 NCACHLDLKSEAYQIVREMKKNGL 600
C + ++V EM + G+
Sbjct: 621 CHVCKGSNAEKVMKVVDEMNQEGV 644
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V N +++ K G D AL V +D + +F ++ GL A R++E ++
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE-ESTTFMILVKGLCKAGRIEEMLEIL 286
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R M EN +P V Y A+I+ L + + V+ M D I D Y +V GLC
Sbjct: 287 QR-MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++E + ++ + D +Y +++G G AC+ +LVDSG +I
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
YN +I C ++ +AY++ + + L PD T
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 157/433 (36%), Gaps = 85/433 (19%)
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR---- 273
AA+ L R G F ++ E + QG E + +I R H R
Sbjct: 159 AAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI-------RMHADNRRGLR 211
Query: 274 --IVYE-MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
VYE MKK GF P LYN I+ L K+G T+ +LV+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 331 ALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRA 390
LC +++ E+L+ M E+ C+
Sbjct: 272 GLCKAGRIEEMLEILQ-----------------------------------RMRENLCKP 296
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DV +I G++D +L+V +M + PDV+++ T++ GL RV+ ++L
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI-KPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F + + L + Y LI G + A ++ +V G AD Y +++GLC
Sbjct: 356 FMEMKGKQILIDREI-YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAIL----------------------------- 541
+Q+++A + I D + I+
Sbjct: 415 SVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDY 474
Query: 542 -----KGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
K LC N ++ ++ + ++ YNIL+ + ++ + EM+
Sbjct: 475 LTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMR 534
Query: 597 KNGLNPDCVTWRI 609
K G PD ++ I
Sbjct: 535 KLGFEPDSSSYSI 547
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
P F +I D R + ++ + M + G +P V YN ++ L K + A
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEK-MKKFGFKPRVFLYNRIMDALVKNGYFDLALA 249
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
VY DG+ +STT+ I+V+GLC +IEE + D F Y A++K L
Sbjct: 250 VYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV 309
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
GN + + E+ + P++ +Y L+ C Y++ EMK + D
Sbjct: 310 SEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDRE 369
Query: 606 TWRILHK---IQGKVR 618
+R+L + GKVR
Sbjct: 370 IYRVLIEGFVADGKVR 385
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 23/270 (8%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCN-VLLARLLRSRTPLQTWALVRSLIV 98
+ LC N+ +A++ F +++ PD T + +++A ++ +R + L R +
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER---I 464
Query: 99 AKPGFVPS--LVNYHRLM--DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
+ G+ S L + +L+ D+ + A +F+ +K +GH +V Y L+
Sbjct: 465 GELGYPVSDYLTQFFKLLCADE----EKNAMALDVFYILKTKGHG-SVSVYNILMEALYK 519
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
+G I + +F EM + G EP+S +YS+ I +++ D++ C E++ +E+
Sbjct: 520 MGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA----CSFHEKI-IEMSCV 574
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE---EVVYGQMIDSLCKVGRYHGA 271
+AA+ +L LC+ G + V + E C G++ E Y + +CK
Sbjct: 575 PSIAAYLSLTKGLCQIGEIDAVMLLVRE--CLGNVESGPMEFKYALTVCHVCKGSNAEKV 632
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
++V EM + G ++V+Y II G++K G
Sbjct: 633 MKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 67/164 (40%)
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A D +M G P + LIR +R + VY M G Y I+
Sbjct: 176 AADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIM 235
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ L + A + + D + ++ + ++KGLC++G E L + ++
Sbjct: 236 DALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCK 295
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
P++F+Y +I + ++ EM+++ + PD + + L
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
+++ G+C+ G + EA +VL M PD+V FT ++SG A ++ +A+DL +
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGL-EPDIVVFTNLLSGYAHAGKMADAYDLMND- 296
Query: 455 MPENGLRPCVVTYNALIRGLYKL-KRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M + G P V Y LI+ L + KR ++A V+ M G AD TYT ++ G C
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
I++ S D+ + Y I+ + F E + ++ G P++ YN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++I AC L EA ++ EM+ NGL+P T+ I+
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 174/412 (42%), Gaps = 14/412 (3%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F L+ + + +E+P G +E V+G ++D+LCK G A+++ +M+
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
++ F P+ + +++G ++G M + + L+ H +
Sbjct: 230 EK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 340 KAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ-CRADVITLNT 397
A +++ M RK G + Y + ++A +E C AD++T
Sbjct: 289 DAYDLMNDM-RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+GFCK G +D+ VL DM K P V++ ++ + +E +L + M
Sbjct: 348 LISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK-MKR 405
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
G P ++ YN +IR KL +A +++ M ++G+ T+ I++ G + E
Sbjct: 406 RGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Query: 518 AKSFWHDVIWPSGIHDNFVYA---AILKGLCRSGNFNEACHFLYELVDSGVSP---NIFS 571
A + + +++ GI Y ++L L R E ++ + + S N+ +
Sbjct: 466 ACNHFKEMV-SRGIFSAPQYGTLKSLLNNLVRDDKL-EMAKDVWSCISNKTSSCELNVSA 523
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLS 623
+ I I+ EA +M + L P T+ L K K+ +T++
Sbjct: 524 WTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIA 575
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 17/424 (4%)
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
+ L+ + S + A +V DEM + G+EP+ + L+ + + G + K++
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCK----NGSVKEASKVF 225
Query: 205 ERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
E M + ++ F +L+ CREG E + ++ G + VV+ ++
Sbjct: 226 EDMREKFPPNLRY--FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 265 VGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-H 323
G+ A ++ +M+KRGF P+ Y +I L + M D
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXS 382
TY L+ C +DK VL M RK+GV +++ Y + A
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M C D++ N VI CK G V EA+++ +M +P V +F +I+G
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL-SPGVDTFVIMINGFTSQG 461
Query: 443 RVDEAFDLFHRVMPENGL--RPCVVTYNALIRGLY---KLKRPNDAFGVYSSMVSDGIGA 497
+ EA + F + M G+ P T +L+ L KL+ D + S+ S
Sbjct: 462 FLIEACNHF-KEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTS-SCEL 519
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFL 557
+ + +TI + L ++EA S+ D++ + YA ++KGL + N A
Sbjct: 520 NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEIT 579
Query: 558 YELV 561
++V
Sbjct: 580 EKVV 583
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ F P+L + L+ +C + +A + MK G P++V +T L++GY G +
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQ-ERDLEGGRELMCKLWERMSVEVESGVKVA 218
DA + ++M + G EPN Y+VLI+ + + E+ ++ + ++ ER E + +
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ERYGCEAD----IV 343
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+ L+ C+ G ++ + + +++ +G + +V Y Q++ + K ++ ++ +M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGD 302
K+RG P ++YN +I K G+
Sbjct: 404 KRRGCHPDLLIYNVVIRLACKLGE 427
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 183/476 (38%), Gaps = 52/476 (10%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
+VR L+ PG L+N ++ C FR A + D G P+V++Y TLI G
Sbjct: 1 MVRGLM-KFPGISTKLLNIS--VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 152 YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV 211
Y GI +A V M E+G+EP+ TY+ LI G
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG------------------------- 92
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
A NL+ N V ++ +E+ G + Y ++ K+GR+ A
Sbjct: 93 -------AAKNLM--------LNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 272 ARIVYE-MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
+I++E + G VP YN ++ L K G + TY +L+
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPEL-MTYNILIN 196
Query: 331 ALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCR 389
LC V +++ L+K G + Y L+ M +
Sbjct: 197 GLCKSRRVGSVDWMMR-ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
D V++ KTG +EA + + +++ + D+VS+ T+++ +D D
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
L + GL+P T+ ++ GL + A + + G+ T +++GL
Sbjct: 316 LLEEI-EMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
C ++ A + + + D F Y +++ LC+ G A L + G+
Sbjct: 375 CKAGHVDRAMRLFASM----EVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 6/246 (2%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
LN +N CK +++ A +L D + +G PDV+++ T+I G +DEA+ + R
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVL--PDVITYNTLIKGYTRFIGIDEAYAVTRR 73
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M E G+ P V TYN+LI G K N ++ M+ G+ D +Y ++
Sbjct: 74 -MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 514 QIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+ EA H+ I +G+ Y +L LC+SG+ + A L++ + S V P + +Y
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE-LFKHLKSRVKPELMTY 191
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSINY 632
NILIN C ++RE+KK+G P+ VT+ + K+ K ++ L +
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 633 EGQDMD 638
EG D
Sbjct: 252 EGYTFD 257
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 5/289 (1%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXS 382
TY L++ +D+A V + M R+ G++ YN +
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRM-REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDE 108
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
ML S D+ + NT+++ + K G EA K+L + + P + ++ ++ L +
Sbjct: 109 MLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
D A +LF + ++ ++P ++TYN LI GL K +R + + G ++ TY
Sbjct: 169 HTDNAIELFKHL--KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
T +++ +IE+ + + D F A++ L ++G EA ++ELV
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 563 SGV-SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
SG S +I SYN L+N ++ E++ GL PD T I+
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 13/311 (4%)
Query: 56 QCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMD 115
Q F L SG PD + N L++ + + + ++ I G VP + Y+ L+D
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI-HLAGLVPGIDTYNILLD 162
Query: 116 QFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
C +A +F +K+R P +++Y LING C +G + E+ +SG P
Sbjct: 163 ALCKSGHTDNAIELFKHLKSRVK-PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFAN--LVDSLCREGFF 233
N++TY+ +++ + + +E G +L K+ + G FAN +V +L + G
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMK-------KEGYTFDGFANCAVVSALIKTGRA 274
Query: 234 NEVFRIAEELPCQGSLAEEVV-YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
E + EL G+ ++++V Y +++ K G ++ E++ +G P D +
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTI 334
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM-LRK 351
I++GL G+ + T L++ LC VD+A + M +R
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRD 394
Query: 352 EGVDKTRIYNI 362
E + ++N+
Sbjct: 395 EFTYTSVVHNL 405
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 160/406 (39%), Gaps = 15/406 (3%)
Query: 41 TLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAK 100
++++LC A + G +PD T N L+ R + +A+ R + +
Sbjct: 19 SVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM--RE 76
Query: 101 PGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
G P + Y+ L+ ++F +M + G P++ SY TL++ Y +G G+
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 161 ARKVFDEMLE-SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
A K+ E + +G+ P TY++L+ + + + EL L R+ E+ +
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMT------ 190
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ L++ LC+ V + EL G V Y M+ K R ++ +MK
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTYKVLVEALCHVFDV 338
K G+ ++ L K G Y+ D +Y L+ ++
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
D ++L+ + K + I + + E + V+T N +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
I+G CK G VD A+++ M + D ++T+V+ L R+
Sbjct: 371 IDGLCKAGHVDRAMRLFASMEV-----RDEFTYTSVVHNLCKDGRL 411
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/350 (19%), Positives = 140/350 (40%), Gaps = 5/350 (1%)
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
++SLCK A ++ + + G +P + YN +I G T+ Y
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 319 XXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXX 378
TY L+ +++ ++ ML YN +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 379 XXXSMLE-SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG 437
+ + + T N +++ CK+G D A+++ + + P+++++ +I+G
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL--KSRVKPELMTYNILING 197
Query: 438 LLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGA 497
L + RV + D R + ++G P VTY +++ +K KR ++ M +G
Sbjct: 198 LCKSRRVG-SVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHF 556
D +V L + EEA H+++ + V Y +L + GN +
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
L E+ G+ P+ +++ I++N ++ A + + + + G+ P VT
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH 555
G + I V LC +E A++ D I + D Y ++KG R +EA
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 556 FLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ ++G+ P++ +YN LI+ A + + Q+ EM +GL+PD ++ L
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 202/502 (40%), Gaps = 76/502 (15%)
Query: 79 RLLRSRTPLQTWALVRSL---------IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRI 129
R +RSRT L + R +A+ G PSL++Y L+ V ++ I
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 130 FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ 189
+++ G + + + +IN + G + DA + +M E G+ P + TY+ LI+G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 190 ERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
E EL+ + E +V+V G + F LV + C++ E + + +++ G
Sbjct: 163 AGKPERSSELLDLMLEEGNVDV--GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYE---MKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
+ V Y + + G A V E MK++ P+ ++ G ++G G
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCREGRVRDG 279
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV-LKLMLRKEGVDKTRIYNIYLR 365
+ + L+ V D D EV L L+L + + N ++
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMK 339
Query: 366 AXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-- 423
M E +ADVIT +TV+N + G +++A +V ++M+
Sbjct: 340 VQVLTL-----------MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 388
Query: 424 -------------------------------CAPDVVSFTTVISGLLDATRVDEAFDLFH 452
P+VV FTTVISG +D+A +F+
Sbjct: 389 DAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFN 448
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE----- 507
+ M + G+ P + T+ L+ G ++K+P A V M G+ +++T+ ++ E
Sbjct: 449 K-MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVA 507
Query: 508 GLCD----------CDQIEEAK 519
GL D C IE AK
Sbjct: 508 GLTDESNKAINALKCKDIEIAK 529
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 204/503 (40%), Gaps = 75/503 (14%)
Query: 139 CPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRE 198
C V S T L+N G +A+ VF + E+G P+ ++Y+ L+
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAA------------ 89
Query: 199 LMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
M+V+ + G + I E+ G+ + + + +
Sbjct: 90 --------MTVQKQYG--------------------SISSIVSEVEQSGTKLDSIFFNAV 121
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
I++ + G A + + +MK+ G P+ YN +I G G R +
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 319 XXCD---HTYKVLVEALCHVFDVDKAREVLKLM----LRKEGVDKTRIYNIYLRAXXXXX 371
T+ VLV+A C V++A EV+K M +R + V I Y++
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+++ + + + T V+ G+C+ G V + L+ ++ M + A ++V F
Sbjct: 242 AESEVVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA-NLVVF 298
Query: 432 TTVISGLLDATRVD---------------EAFDLFHR---------VMPENGLRPCVVTY 467
++I+G ++ D E +L +M E ++ V+TY
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITY 358
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
+ ++ A V+ MV G+ D+ Y+I+ +G + ++A+ +I
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 528 PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSE 587
S + ++ ++ G C +G+ ++A ++ GVSPNI ++ L+ + +
Sbjct: 419 ESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 588 AYQIVREMKKNGLNPDCVTWRIL 610
A ++++ M+ G+ P+ T+ +L
Sbjct: 478 AEEVLQMMRGCGVKPENSTFLLL 500
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 157/417 (37%), Gaps = 103/417 (24%)
Query: 54 AHQCFSISLASGSV---PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
+ + + L G+V P+ RT NVL+ + + + W +V+ + + G P V Y
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM--EECGVRPDTVTY 226
Query: 111 HRLMDQFCVFRRPCDAHRIFFD---MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ + + A + MK + PN + ++ GYC G + D +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAK-PNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
M E VE N + ++ LI G ++ D +G E+ L + +F V+ +
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL------------LMSFNEEVELV 333
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
+ +V + +E + A+ + Y ++++ G AA++ EM K G P
Sbjct: 334 GNQKMKVQVLTLMKECNVK---ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD- 389
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
H Y +L + + KA E+L+
Sbjct: 390 ----------------------------------AHAYSILAKGYVRAKEPKKAEELLET 415
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
++ + R +V+ TVI+G+C GS
Sbjct: 416 LI------------------------------------VESRPNVVIFTTVISGWCSNGS 439
Query: 408 VDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDEAFDLFHR-----VMPEN 458
+D+A++V M KF +P++ +F T++ G L+ + +A ++ V PEN
Sbjct: 440 MDDAMRVFNKMC--KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 494
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+T ++A + +A Q F + +G PD ++L +R++ P + L+ +LIV
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
P++V + ++ +C DA R+F M G PN+ ++ TL+ GY V
Sbjct: 419 ESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 159 GDARKVFDEMLESGVEPNSLTYSVL 183
A +V M GV+P + T+ +L
Sbjct: 476 WKAEEVLQMMRGCGVKPENSTFLLL 500
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 11/311 (3%)
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
L+ ALC +V KA+EV + M R ++ Y+I L M+++
Sbjct: 209 LLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
C D++T + +++ CK G VDEAL +++ M C P ++ ++ R++EA
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
D F M +G++ V +N+LI K R + + V M S G+ +S + II+
Sbjct: 327 VDTFLE-MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
L + + +EA + +I D Y ++K C A + GV P
Sbjct: 386 HLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQS 627
++ ++++LIN C +A ++ EM + G+ P VT+ G++R+ + E +
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF-------GRLRQLLIKEERE 497
Query: 628 LSINYEGQDMD 638
+ + + M+
Sbjct: 498 DVLKFLNEKMN 508
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 150/363 (41%), Gaps = 71/363 (19%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ K P+LV ++ L+ C + A +F +M++R P+ +Y+ L+ G+
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ AR+VF EM+++G P+ +TYS+++ +++CK + V+ +
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMV-------------DILCK-----AGRVDEALG 293
Query: 217 VAA-------------FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
+ ++ LV + E E E+ G A+ V+ +I + C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
K R R++ EMK +G P+ N I+ L + G+ + D
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD- 412
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY ++++ C +++ A +V K M RK+GV +
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYM-RKKGVFPS-------------------------- 445
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDAT 442
+ T + +ING C+ + +A +L++M+ MG P V+F + L+
Sbjct: 446 --------MHTFSVLINGLCEERTTQKACVLLEEMIEMG--IRPSGVTFGRLRQLLIKEE 495
Query: 443 RVD 445
R D
Sbjct: 496 RED 498
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDEAFD 449
+V T V+ + + VDEA+ +M K+ P++V+F ++S L + V +A +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFN--VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 224
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
+F + + P TY+ L+ G K A V+ M+ G D TY+I+V+ L
Sbjct: 225 VFENM--RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 282
Query: 510 CDCDQIEEA----KSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
C +++EA +S + P+ F+Y+ ++ EA E+ SG+
Sbjct: 283 CKAGRVDEALGIVRSMDPSICKPT----TFIYSVLVHTYGTENRLEEAVDTFLEMERSGM 338
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++ +N LI C + Y++++EMK G+ P+ + I+
Sbjct: 339 KADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 413 KVLQDML--MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
K++ D++ M K +V +F V+ A +VDEA F+ VM + L P +V +N L
Sbjct: 151 KLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFN-VMEKYDLPPNLVAFNGL 209
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG 530
+ L K K A V+ +M D DS TY+I++EG + +A+ + ++I +G
Sbjct: 210 LSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI-DAG 267
Query: 531 IHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
H + V Y+ ++ LC++G +EA + + S P F Y++L++ + EA
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Query: 590 QIVREMKKNGLNPDCVTWRIL 610
EM+++G+ D + L
Sbjct: 328 DTFLEMERSGMKADVAVFNSL 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 44 ALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGF 103
A C +NR ++ + G P+ ++CN++L L+ + + + R +I
Sbjct: 351 AFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-- 408
Query: 104 VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARK 163
P Y ++ FC + A +++ M+ +G P++ +++ LING C A
Sbjct: 409 -PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQE 190
+ +EM+E G+ P+ +T+ L + +++E
Sbjct: 468 LLEEMIEMGIRPSGVTFGRLRQLLIKE 494
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 109/249 (43%), Gaps = 10/249 (4%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFV-PSLVNYH 111
+A + F + +G PD T ++++ L ++ + +VRS+ P P+ Y
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM---DPSICKPTTFIYS 311
Query: 112 RLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES 171
L+ + R +A F +M+ G +V + +LI +C + + +V EM
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG 231
GV PNS + ++++R +++ + + ++ K+ + + ++ + ++ C +
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADT------YTMVIKMFCEKK 425
Query: 232 FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
++ + + +G + +I+ LC+ A ++ EM + G PS V +
Sbjct: 426 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485
Query: 292 YIIHGLTKD 300
+ L K+
Sbjct: 486 RLRQLLIKE 494
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
L + + G + ++ L+ FC R + +R+ +MK++G PN S ++
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G +A VF +M++ EP++ TY+++I+ +++++E K+W+ M + GV
Sbjct: 391 GEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETAD----KVWKYMR---KKGV 442
Query: 216 --KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+ F+ L++ LC E + + EE+ G V +G++ L K R
Sbjct: 443 FPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/550 (21%), Positives = 222/550 (40%), Gaps = 68/550 (12%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+A + F K ++ + L+N G IG +F ++ + G+ N TY++++
Sbjct: 164 EATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVV 223
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
+ + ++ +LE L+ +E ES V + ++ LC G + + EL
Sbjct: 224 KALCRKGNLEEAAMLL--------IENES---VFGYKTFINGLCVTGETEKAVALILELI 272
Query: 245 CQGSLAEE---VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ LA + V G ++ C + A ++ EM++ GF +I K+
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-Y 360
+ ++++ C + +A E K R + R+ Y
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK-EFRDMNIFLDRVCY 391
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLM 420
N+ A M + DVI T+I+G+C G V +AL ++ +M+
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI- 450
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL---YKL 477
G +PD++++ ++SGL +E +++ R+ E G +P VT + +I GL K+
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE-GPKPNAVTNSVIIEGLCFARKV 509
Query: 478 KRPNDAFG-------------------------VYSSMVSDGIGADSTTYTIIVEGLCDC 512
K D F Y + V + Y + LC
Sbjct: 510 KEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIE 569
Query: 513 DQIEEAKSFWHDVIWPSGIH----DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
+E+A HDV+ + + ++ C+ N EA +V+ G+ P+
Sbjct: 570 GYLEKA----HDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL-----------HK---IQ 614
+F+Y I+I+ C L+ +A + +MK+ G+ PD VT+ +L H+ +Q
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 615 GKVRKQTLSE 624
G+V K+ SE
Sbjct: 686 GEVGKRKASE 695
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 178/444 (40%), Gaps = 49/444 (11%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG--QMIDSLCKVGRYHGAARIVYE 277
+A +V +LCR+G E + E E V+G I+ LC G A ++ E
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIE--------NESVFGYKTFINGLCVTGETEKAVALILE 270
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDC----MRGYQXXXXXXXXXXXXCD-HTYKVLVEAL 332
+ R ++ D L + G+ G C M+ + D + +++
Sbjct: 271 LIDRKYLAGDDLR--AVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRY 328
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
C ++ +A L ML K I ++ L+ + D
Sbjct: 329 CKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDR 388
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
+ N + K G V+EA ++LQ+M + PDV+++TT+I G +V +A DL
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
M NG+ P ++TYN L+ GL + + +Y M ++G ++ T ++I+EGLC
Sbjct: 448 E-MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Query: 513 DQIEEAKSFWHDV-----------------------IWPSGIHDNF-----VYAAILKGL 544
+++EA+ F+ + + + + + VY + L
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDC 604
C G +A L ++ V P +I C L+ EA + M + GL PD
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 605 VTWRILHKIQGKVRKQTLSEYQSL 628
T+ I+ I R L + +SL
Sbjct: 627 FTYTIM--IHTYCRLNELQKAESL 648
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 43/390 (11%)
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
V Y+ D R +A + +MK+RG P+V++YTTLI+GYC G + DA + DE
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFAN--LVD 225
M+ +G+ P+ +TY+VL+ G+ + G E + +++ERM E G K A N +++
Sbjct: 449 MIGNGMSPDLITYNVLVSGLAR----NGHEEEVLEIYERMKAE---GPKPNAVTNSVIIE 501
Query: 226 SLC--REGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG----RYHGAARIVYEMK 279
LC R+ E F + E C + A + C+ G Y R+ Y ++
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPENKA------SFVKGYCEAGLSKKAYKAFVRLEYPLR 555
Query: 280 KRGFVPSDVLYNYIIHG-LTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
K ++ + ++ I G L K D ++ + C ++ A C + +V
Sbjct: 556 KSVYIK--LFFSLCIEGYLEKAHDVLK--KMSAYRVEPGRSMCGK----MIGAFCKLNNV 607
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
+A+ + M+ + + Y I + M + + DV+T +
Sbjct: 608 REAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 399 INGFCK-------TGSVD-EALKVLQDMLMGKFCAP----DVVSFTTVISGLLDATRVDE 446
++ + K T SV E K ++ +F A DVV +T +I +++
Sbjct: 668 LDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYK 476
A +LF R M ++GL P +V Y LI ++
Sbjct: 728 AAELFDR-MIDSGLEPDMVAYTTLISSYFR 756
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 197/496 (39%), Gaps = 29/496 (5%)
Query: 117 FCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPN 176
FC + A + +M+ G +V + +I+ YC + +A D+ML G++ N
Sbjct: 293 FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
Query: 177 SLTYSVLIRGVLQ-ERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
+ S++++ + + LE + K + M++ ++ AF D+L + G E
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKF--KEFRDMNIFLDRVCYNVAF----DALSKLGRVEE 406
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
F + +E+ +G + + + Y +ID C G+ A ++ EM G P + YN ++
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
GL ++G + T V++E LC V +A + + +K +
Sbjct: 467 GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN 526
Query: 356 KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVL 415
K Y A LE R V + C G +++A VL
Sbjct: 527 KASFVKGYCEAGLSKKAYKAFVR-----LEYPLRKSVYI--KLFFSLCIEGYLEKAHDVL 579
Query: 416 QDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
+ M + P +I V EA LF M E GL P + TY +I
Sbjct: 580 KKMSAYR-VEPGRSMCGKMIGAFCKLNNVREAQVLFD-TMVERGLIPDLFTYTIMIHTYC 637
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD---------QIEEAKSFWHDVI 526
+L A ++ M GI D TYT++++ D Q E K +V+
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 527 W---PSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL 582
+GI + V Y ++ C+ N +A ++DSG+ P++ +Y LI+
Sbjct: 698 REFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Query: 583 DLKSEAYQIVREMKKN 598
A +V E+ K
Sbjct: 758 GYIDMAVTLVTELSKK 773
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 125/612 (20%), Positives = 223/612 (36%), Gaps = 75/612 (12%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
F EA S V D + CN L+ R+ L + L + G + Y
Sbjct: 162 FDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQL--KQLGLCANEYTY 219
Query: 111 HRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLE 170
++ C R+ ++N +V Y T ING C G A + E+++
Sbjct: 220 AIVVKALC--RKGNLEEAAMLLIENE----SVFGYKTFINGLCVTGETEKAVALILELID 273
Query: 171 SGVEPNSLTYSVL---IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
+VL +RG E ++ ++ ++ E+ G+ V A ++D
Sbjct: 274 RKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEME-----EIGFGLDVYACLAVIDRY 328
Query: 228 CRE-------GFFNEVFRIAEELPC----------------------------QGSLAEE 252
C+ GF +++ ++ C +
Sbjct: 329 CKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDR 388
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXX 312
V Y D+L K+GR A ++ EMK RG VP + Y +I G G +
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 313 XXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
TY VLV L ++ E+ + M + EG + N +
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM-KAEGPKPNAVTNSVIIEGLCFAR 507
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV-VSF 431
S LE +C + + + G+C+ G +A K + + + + F
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+ I G L ++A D+ + M + P +I KL +A ++ +MV
Sbjct: 565 SLCIEGYL-----EKAHDVLKK-MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAIL-KGLCRSGNF 550
G+ D TYTI++ C +++++A+S + D+ D Y +L + L
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 551 NEAC------------HFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
+E C L E +G+ ++ Y +LI+ C ++ +A ++ M +
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 599 GLNPDCVTWRIL 610
GL PD V + L
Sbjct: 739 GLEPDMVAYTTL 750
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 150/379 (39%), Gaps = 39/379 (10%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G VP ++NY L+D +C+ + DA + +M G P++++Y L++G G +
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS------------- 208
++++ M G +PN++T SV+I G+ R ++ + L ++
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Query: 209 ----------VEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQM 258
V +E ++ + + L SLC EG+ + + +++ + G+M
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 259 IDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
I + CK+ A + M +RG +P Y +IH + + +
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 319 XXCDHTYKVLVE----------ALCHV---FDVDKAREVLKLMLRKEGVDKTRI-YNIYL 364
TY VL++ C V KA EVL+ G+ + Y + +
Sbjct: 658 KPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLR-EFSAAGIGLDVVCYTVLI 716
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
M++S D++ T+I+ + + G +D A+ ++ + L K+
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTE-LSKKYN 775
Query: 425 APDVVSFTTVISGLLDATR 443
P V S L A R
Sbjct: 776 IPSESFEAAVKSAALKAKR 794
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 177/466 (37%), Gaps = 39/466 (8%)
Query: 123 PCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
P A +K G PNV +Y TL+ + G V E++++ E T
Sbjct: 70 PNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKN--EERGFTVMD 127
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE---VFRI 239
LI V+ E+ E R + + V SG V A+ +L G F+E V
Sbjct: 128 LIE-VIGEQAEEKKRSFVL-------IRV-SGALVKAYVSL-------GMFDEATDVLFQ 171
Query: 240 AEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTK 299
++ L C + + +++ + + G+ + ++K+ G ++ Y ++ L +
Sbjct: 172 SKRLDC---VVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCR 228
Query: 300 DGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE-VLKLMLRK--EGVDK 356
G+ YK + LC + +KA +L+L+ RK G D
Sbjct: 229 KGNLEEAAMLLIENESV------FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 357 TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQ 416
+ + +R M E DV VI+ +CK ++ EAL L
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 417 DMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL--RPCVVTYNALIRGL 474
ML GK + V + ++ EA + F N R C YN L
Sbjct: 343 KML-GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC---YNVAFDAL 398
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
KL R +AF + M GI D YT +++G C ++ +A ++I D
Sbjct: 399 SKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDL 458
Query: 535 FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
Y ++ GL R+G+ E + G PN + +++I C
Sbjct: 459 ITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 195/489 (39%), Gaps = 55/489 (11%)
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
++ E GV PN Y+ L+R + W G+ + +DS
Sbjct: 79 QLKEHGVSPNVNAYATLVR--------------ILTTW---------GLDIK-----LDS 110
Query: 227 LCREGFFNEV--FRIAEELPCQGSLAEEV--------VYGQMIDSLCKVGRYHGAARIVY 276
+ E NE F + + + G AEE V G ++ + +G + A +++
Sbjct: 111 VLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLF 170
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC--DHTYKVLVEALCH 334
+ K+ V N++++ +T+ G G C ++TY ++V+ALC
Sbjct: 171 QSKRLDCVVDIKACNFLMNRMTEFGKI--GMLMTLFKQLKQLGLCANEYTYAIVVKALCR 228
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRA--DV 392
++++A L++ E V Y ++ +++ + A D+
Sbjct: 229 KGNLEEAA---MLLIENESVFG---YKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 393 -ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
L V+ GFC + A V+ +M F DV + VI + EA
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGF-GLDVYACLAVIDRYCKNMNLPEALGFL 341
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+++ + GL+ V + +++ K+ +A + I D Y + + L
Sbjct: 342 DKMLGK-GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++EEA ++ + D Y ++ G C G +A + E++ +G+SP++ +
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSIN 631
YN+L++ + E +I MK G P+ VT ++ I+G + + E + +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI--IEGLCFARKVKEAEDFFSS 518
Query: 632 YEGQDMDNK 640
E + +NK
Sbjct: 519 LEQKCPENK 527
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 44 ALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGF 103
A C N EA F + G +PD T +++ R + +L + + G
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM--KQRGI 657
Query: 104 VPSLVNYHRLMDQFCVF----RRPCD---------AHRIFFDMKNRGHCPNVVSYTTLIN 150
P +V Y L+D++ C A + + G +VV YT LI+
Sbjct: 658 KPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLID 717
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
C + + A ++FD M++SG+EP+ + Y+ LI ++ ++ L+ +L ++ ++
Sbjct: 718 RQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Query: 211 VES---GVKVAAF 220
ES VK AA
Sbjct: 778 SESFEAAVKSAAL 790
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 20/258 (7%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T + C + +A + +G PD T NVL++ L R+ + + +
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
P P+ V +++ C R+ +A F ++ + CP + + + GYC G
Sbjct: 488 GPK--PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPE--NKASFVKGYCEAGLSK 541
Query: 160 DARKVFDEMLESGVEPN---SLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A K F LE + + L +S+ I G LE +++ K+ + VE G
Sbjct: 542 KAYKAFVR-LEYPLRKSVYIKLFFSLCIEGY-----LEKAHDVLKKMS---AYRVEPGRS 592
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ ++ + C+ E + + + +G + + Y MI + C++ A +
Sbjct: 593 MC--GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFE 650
Query: 277 EMKKRGFVPSDVLYNYII 294
+MK+RG P V Y ++
Sbjct: 651 DMKQRGIKPDVVTYTVLL 668
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 5/280 (1%)
Query: 324 TYKVLVEALCHVFD--VDKAREVLKLMLRKEGVDKTRIY-NIYLRAXXXXXXXXXXXXXX 380
T+ +L+ C D + VL LM+ G++ ++ +I +R+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVN-NGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
+ E D T N ++ CK + + + +M PD+VSFT +I + +
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
+ + EA L + + G +P YN +++G L + ++A GVY M +G+ D
Sbjct: 243 SKNLREAMYLVSK-LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
TY ++ GL ++EEA+ + ++ D Y +++ G+CR G A L E+
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
G +PN +YN L++ C L + ++ MK +G+
Sbjct: 362 EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 131/329 (39%), Gaps = 45/329 (13%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
Q + + +LC++ R EA S PD T N LL L + + + V
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 95 SLIVAKPGF--VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGY 152
+ + F P LV++ L+D C + +A + + N G P+ Y T++ G+
Sbjct: 219 EM---RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE 212
C++ +A V+ +M E GVEP+ +TY+ LI G+ + +E R +
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL------------ 323
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
+VD+ G + Y +++ +C+ G GA
Sbjct: 324 --------KTMVDA--------------------GYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
++ EM+ RG P+D YN ++HGL K +G + + Y LV +L
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
V +A EV + + + Y+
Sbjct: 416 VKSGKVAEAYEVFDYAVDSKSLSDASAYS 444
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
T + V +LC VD+A++++K + K T YN L+ M
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 384 LES-QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
+ + D+++ +I+ C + ++ EA+ ++ + F PD + T++ G +
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF-KPDCFLYNTIMKGFCTLS 279
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ EA ++ + M E G+ P +TYN LI GL K R +A +MV G D+ TY
Sbjct: 280 KGSEAVGVYKK-MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
T ++ G+C + A S ++ ++ Y +L GLC++ ++ +
Sbjct: 339 TSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQI 591
SGV Y L+ +EAY++
Sbjct: 399 SGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M+ + D +T + + C+TG VDEA ++++ L K PD ++ ++ L
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ ++ + + ++P +V++ LI + K +A + S + + G D Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++G C + EA + + D Y ++ GL ++G EA +L +VD
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP-DCVTWRILHKI 613
+G P+ +Y L+N C A ++ EM+ G P DC +LH +
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 187/478 (39%), Gaps = 92/478 (19%)
Query: 105 PSLVNYHR---LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
PSL N + L D +F RI D+K + +++ Y S+ + D
Sbjct: 54 PSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLK---------FHNSVLQSYGSIAVVNDT 104
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K+F +L+S +PN GR + F
Sbjct: 105 VKLFQHILKS--QPN----------------FRPGR--------------------STFL 126
Query: 222 NLVDSLCR--EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
L+ CR + + V R+ + G ++V + SLC+ GR A ++ E+
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDV 338
++ P YN+++ L K D Y+ D ++ +L++ +C+ ++
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
RE + L+ + + + + D NT+
Sbjct: 247 ---REAMYLVSK--------------------------------LGNAGFKPDCFLYNTI 271
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+ GFC EA+ V + M + PD +++ T+I GL A RV+EA ++ + M +
Sbjct: 272 MKGFCTLSKGSEAVGVYKKM-KEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDA 329
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
G P TY +L+ G+ + A + M + G + TY ++ GLC +++
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 519 KSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+ +++ SG+ ++ YA +++ L +SG EA VDS + +Y+ L
Sbjct: 390 MELY-EMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGK-FCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N+V+ + V++ +K+ Q +L + P +F ++S A D + HRV
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRV 146
Query: 455 ---MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
M NGL P VT + +R L + R ++A + + D+ TY +++ LC
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C + F ++ + + V + ++ +C S N EA + + +L ++G P+ F
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
YN ++ C L SEA + ++MK+ G+ PD +T+ L
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 444 VDEAFDLFHRVMP-ENGLRPCVVTYNALIRGLYKLKRPNDAFG----VYSSMVSDGIGAD 498
V++ LF ++ + RP T+ LI + + P+ + V + MV++G+ D
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVHRVLNLMVNNGLEPD 158
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
T I V LC+ +++EAK ++ D + Y +LK LC+ + H +Y
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL----HVVY 214
Query: 559 ELVDS-----GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
E VD V P++ S+ ILI+ C+ EA +V ++ G PDC + + K
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/554 (20%), Positives = 221/554 (39%), Gaps = 26/554 (4%)
Query: 62 LASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFR 121
L +G VPDH T VLL L + +++S++ G P +++ ++
Sbjct: 405 LDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIE------ 458
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
+ ++ + V + CS A ++M+ G P +Y+
Sbjct: 459 --VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYN 516
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+I+ + QE +E L+ + E++ V + +V+ LC++ + F I +
Sbjct: 517 SVIKCLFQENIIEDLASLV-----NIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ G +Y +I SL K GR A +M + G P ++ Y +I+ ++G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
+ TY VL+ + ++K + L ML +Y
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVL----QD 417
+ M E+ + D I T+++G + + + +V+ ++
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
L+ + ++ S L + A ++ +V + + P + +N +I G
Sbjct: 752 KLLQRLIRTK--PLVSIPSSLGNYGSKSFAMEVIGKV--KKSIIPNLYLHNTIITGYCAA 807
Query: 478 KRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY 537
R ++A+ SM +GI + TYTI+++ + IE A + D +Y
Sbjct: 808 GRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEP---DQVMY 864
Query: 538 AAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
+ +LKGLC +A + E+ SG++PN SY L+ C C+ L EA ++V++M
Sbjct: 865 STLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAA 924
Query: 598 NGLNPDCV--TWRI 609
+ P + TW I
Sbjct: 925 LDIWPRSINHTWLI 938
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 131/590 (22%), Positives = 236/590 (40%), Gaps = 59/590 (10%)
Query: 26 IATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRT 85
IA+ +PS ++S + + LC+ +RF EA CF GS C L L
Sbjct: 158 IASGYAPS-RNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGH 216
Query: 86 PLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC--DAHRIFFDMKNRGHCPNVV 143
+ ++ +L +P VN ++ + +C +R C +A +F M+ G+ + V
Sbjct: 217 LNEAIGMLDTLCGMTR--MPLPVNLYKSL-FYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 144 SYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
YT L+ YC + A +++ M+E E + ++ LI G ++ L+ GR + ++
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Query: 204 WERMSVEVESGVKVAAFAN--LVDSLCREGFFNEVFRIAEELPCQGSLAEEV-VYGQMID 260
++ GV+ F ++ S C+EG + R+ ++ V Y +I
Sbjct: 334 -------IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 261 SLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX 320
K G A ++ M G VP + Y ++ L K C
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK---CHELKYAMVILQSILDNG 443
Query: 321 CDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXX 380
C V ++ L ++ +V K +L + RK+ + A
Sbjct: 444 CGINPPV-IDDLGNI-EV-KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
M+ C + N+VI + ++ E L L +++ PDV ++ V++ L
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQE-NIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
D AF + M E GLRP V Y+++I L K R +A ++ M+ GI D
Sbjct: 560 KNDRDAAFAIID-AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI 618
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
Y I++ YA R+G +EA + E+
Sbjct: 619 AYMIMIN----------------------------TYA-------RNGRIDEANELVEEV 643
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
V + P+ F+Y +LI+ + + + Q + +M ++GL+P+ V + L
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 80/205 (39%), Gaps = 14/205 (6%)
Query: 4 LTFLISLKPKPFIPFSL--RFSTTIATPSSPSLQHSIATTLH-------ALCDSNRFSEA 54
L LI KP IP SL S + A ++ SI L+ C + R EA
Sbjct: 754 LQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEA 813
Query: 55 HQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLM 114
+ G VP+ T +L+ + + L P V Y L+
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG-----TNCEPDQVMYSTLL 868
Query: 115 DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE 174
C F+RP DA + +M+ G PN SY L+ C +A KV +M +
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIW 928
Query: 175 PNSLTYSVLIRGVLQERDLEGGREL 199
P S+ ++ LI + +E+ L R L
Sbjct: 929 PRSINHTWLIYILCEEKKLREARAL 953
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 114/216 (52%), Gaps = 2/216 (0%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M E +V+T N +I+ FC +G +A ++L+ M+ K PD+V+F+ +I+ +
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI-EKQINPDIVTFSALINAFVKER 94
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+V EA +++ + M + P +TYN++I G K R +DA + SM S G D T+
Sbjct: 95 KVSEAEEIY-KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+ ++ G C +++ + ++ + + Y ++ G C+ G+ + A L E++
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
GV+P+ +++ ++ C +A+ I+ +++K+
Sbjct: 214 CGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
++D+ C +A +F +M +G PNV++Y +I+ +C G DA ++ M+E
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKL--WERMSVEVESGVKVAAFANLVDSLCRE 230
+ P+ +T+S LI ++ER + E+ ++ W + + +++D C++
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTI-------TYNSMIDGFCKQ 128
Query: 231 GFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
++ R+ + + +G + V + +I+ CK R I EM +RG V + V Y
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 291 NYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDVDKAREVLKLML 349
+IHG + GD + Q D+ T+ ++ LC ++ KA +L+ +
Sbjct: 189 TTLIHGFCQVGD-LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Query: 350 RKE 352
+ E
Sbjct: 248 KSE 250
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ + C S R+S+A Q + PD T + L+ ++ R + + + ++ +
Sbjct: 52 IDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML--RW 109
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P+ + Y+ ++D FC R DA R+ M ++G P+VV+++TLINGYC + +
Sbjct: 110 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 169
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAA 219
++F EM G+ N++TY+ LI G Q DL+ ++L+ ++ + GV
Sbjct: 170 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM-------ISCGVAPDYIT 222
Query: 220 FANLVDSLCREGFFNEVFRIAEEL 243
F ++ LC + + F I E+L
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDL 246
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 2/241 (0%)
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
A+ V+ ++D LCK G + A + EM ++G P+ + YN +I G Q
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
T+ L+ A V +A E+ K MLR T YN +
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
SM C DV+T +T+ING+CK VD +++ +M A + V
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA-NTV 186
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++TT+I G +D A DL + M G+ P +T++ ++ GL K AF +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNE-MISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 490 M 490
+
Sbjct: 246 L 246
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
+ G P+++ Y+ ++D FC R DA ++ M + P++V+++ LIN + +
Sbjct: 38 EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVS 97
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAA 219
+A +++ EML + P ++TY+ +I G ++ ++ + ++ + + V
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-----GCSPDVVT 152
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
F+ L++ C+ + I E+ +G +A V Y +I C+VG A ++ EM
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
G P + ++ ++ GL + + +
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
+VV T +++ C G +A+ +F EM E G+ PN LTY+ +I +L
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+ R +E + + F+ L+++ +E +E I +E+ + Y MI
Sbjct: 68 L-----RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 260 DSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXX 319
D CK R A R++ M +G P V ++ +I+G K G +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 320 XCDHTYKVLVEALCHVFDVDKAREVLKLML 349
TY L+ C V D+D A+++L M+
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
DVV T ++ L A +LF M E G+ P V+TYN +I R +DA
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTE-MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
+ M+ I D T++ ++ ++ EA+ + +++ S Y +++ G C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
+ ++A L + G SP++ +++ LIN C +I EM + G+ + V
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 606 TWRILHKIQGKVRKQTLSEYQSL 628
T+ L I G + L Q L
Sbjct: 187 TYTTL--IHGFCQVGDLDAAQDL 207
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%)
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M ++ ++ VV A++ L K +A +++ M GI + TY +++ C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
+A +I D ++A++ + +EA E++ + P +YN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+I+ C D +A +++ M G +PD VT+ L
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 183/461 (39%), Gaps = 25/461 (5%)
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE 212
C G + +A K D + + G + TY L+ + + GR L + + E +
Sbjct: 57 CRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF--GLFTEPD 114
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE--VVYGQMIDSLCKVGRYHG 270
V+ + C IA+ S+ E + MI + + R+
Sbjct: 115 VFVETKLLSMYAKCGC----------IADARKVFDSMRERNLFTWSAMIGAYSRENRWRE 164
Query: 271 AARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
A++ M K G +P D L+ I+ G GD G C ++
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 331 ALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRA 390
++D A + + M ++ + +N L A M +
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVI----AWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
++T N +I G+ + G D A+ ++Q M A DV ++T +ISGL+ +A D+
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA-DVFTWTAMISGLIHNGMRYQALDM 339
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F R M G+ P VT + + LK N V+S V G D +V+
Sbjct: 340 F-RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C ++E+A+ + V D + + +++ G C++G +A + D+ + PNI
Sbjct: 399 KCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNG-LNPDCVTWRIL 610
++N +I+ + EA + + M+K+G + + TW ++
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 173/396 (43%), Gaps = 22/396 (5%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
DA ++F M+ R N+ +++ +I Y + K+F M++ GV P+ + ++
Sbjct: 133 DARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCRE-GFFNEVFRIAEEL 243
+G D+E G+ + + + + + S ++V+ V + C E F + FR E
Sbjct: 189 QGCANCGDVEAGKVIHSVV---IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE- 244
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
+ + + ++ + C+ G++ A +V EM+K G P V +N +I G + G C
Sbjct: 245 ------RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIY 363
T+ ++ L H +A ++ + M V
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+ A ++ DV+ N++++ + K G +++A KV D + K
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF-DSVKNK- 416
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
DV ++ ++I+G A +A++LF R+ N LRP ++T+N +I G K +A
Sbjct: 417 ---DVYTWNSMITGYCQAGYCGKAYELFTRMQDAN-LRPNIITWNTMISGYIKNGDEGEA 472
Query: 484 FGVYSSMVSDG-IGADSTTYTIIVEGLCDCDQIEEA 518
++ M DG + ++ T+ +I+ G + +EA
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/533 (17%), Positives = 204/533 (38%), Gaps = 61/533 (11%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRT---PLQTWALVRS 95
+ + A NR+ E + F + + G +PD + L ++L+ ++ ++ S
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPD----DFLFPKILQGCANCGDVEAGKVIHS 205
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
+++ K G L + ++ + A + F M+ R +V+++ +++ YC
Sbjct: 206 VVI-KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN 260
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G +A ++ EM + G+ P +T+++LI G Q + +LM K+ E + +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITAD--- 316
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
V + ++ L G + + ++ G + V + + + + + +
Sbjct: 317 -VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
K GF+ ++ N ++ +K G + +T+ ++ C
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQA 431
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
KA Y ++ R M ++ R ++IT
Sbjct: 432 GYCGKA------------------YELFTR-----------------MQDANLRPNIITW 456
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
NT+I+G+ K G EA+ + Q M + ++ +I+G + + DEA +LF R M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF-RKM 515
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
+ P VT +L+ L ++ ++ + A + + I
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
E +++ + D + +++ G G++ A ++ G++PN
Sbjct: 576 EYSRT----IFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 421 GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRP 480
G F PDV T ++S + +A +F + N + T++A+I + R
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERN-----LFTWSAMIGAYSRENRW 162
Query: 481 NDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI--------- 531
+ ++ M+ DG+ D + I++G +C +E K H V+ G+
Sbjct: 163 REVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI-HSVVIKLGMSSCLRVSNS 221
Query: 532 -----------------------HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
D + ++L C++G EA + E+ G+SP
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK--IQGKVRKQTLSEYQ 626
+ ++NILI L A ++++M+ G+ D TW + I +R Q L ++
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 627 SL 628
+
Sbjct: 342 KM 343
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 186/475 (39%), Gaps = 48/475 (10%)
Query: 143 VSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK 202
V + L+ GY +G + + +VF E+L+SG +SV + + +LM
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSG-------FSVSVVTCNHLLNGLLKLDLMED 219
Query: 203 LWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMID 260
W+ SV G+ F L + C + F EV E++ +G + V Y ++
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 261 SLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX 320
S C+ GR A + M +R VP V Y +I GL KDG +Q
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 321 CDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXX 380
+Y L+ A C + +++++L ML V
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV-------------------------- 373
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP-DVVSFTTVISGLL 439
D T ++ GF + G + A+ + ++ K P +V F +I L
Sbjct: 374 ---------PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDF--LIVSLC 422
Query: 440 DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
+ A L R++ E G TYN LI L + +A + + + D+
Sbjct: 423 QEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA 482
Query: 500 TTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYE 559
TY ++ LC + EA+S ++ D+F+ A++ G C+ +F++A L
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 560 LVDSGVSPNIFSYNILINCACHLDLK-SEAYQIVREMKKNGLNPDCVTWRILHKI 613
+ SYN L+ C +A ++ M++ G P+ +T + L ++
Sbjct: 543 FAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQV 597
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
+C D + + ++ G+ K G V+E +V +++L F VV+ +++GLL +++
Sbjct: 161 ECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSV-SVVTCNHLLNGLLKLDLMED 219
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
+ ++ VM G+ P T+N L + M +G D TY +V
Sbjct: 220 CWQVYS-VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
C +++EA + + + D Y +++KGLC+ G EA + +VD G+
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTL 622
P+ SYN LI C + ++ +++ EM N + PD T +++ ++G VR+ L
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI--VEGFVREGRL 392
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 175/435 (40%), Gaps = 60/435 (13%)
Query: 56 QCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMD 115
Q +S+ G P+ T N+L + + + + GF P LV Y+ L+
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM--EEEGFEPDLVTYNTLVS 279
Query: 116 QFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
+C R +A ++ M R P++V+YT+LI G C G + +A + F M++ G++P
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG---- 231
+ ++Y+ LI +E ++ ++L+ ++ V KV +V+ REG
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV-----IVEGFVREGRLLS 394
Query: 232 ---FFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE-MKKRGFVPSD 287
F E+ R+ ++P + V +I SLC+ G+ A ++ +++ G
Sbjct: 395 AVNFVVELRRLKVDIPFE-------VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 288 VLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
YN +I L++ TY+ L+ LC + + RE L
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCR---IGRNREAESL 504
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
M M +S+ + D ++ G+CK
Sbjct: 505 M--------------------------------AEMFDSEVKPDSFICGALVYGYCKELD 532
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD-ATRVDEAFDLFHRVMPENGLRPCVVT 466
D+A ++L M +F D S+ +++ + + +A +L R M G P +T
Sbjct: 533 FDKAERLLSLFAM-EFRIFDPESYNSLVKAVCETGCGYKKALELQER-MQRLGFVPNRLT 590
Query: 467 YNALIRGLYKLKRPN 481
LI+ L + PN
Sbjct: 591 CKYLIQVLEQPSLPN 605
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 165/427 (38%), Gaps = 24/427 (5%)
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV-------------KVA 218
G PN Y +L+ ++ + + +C+L E S + E V
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
F LV + G E FR+ E+ G V +++ L K+ ++ M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFD 337
+ G P+ +N + + D + R D TY LV + C
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSN-FREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ +A + K+M R+ V Y ++ M++ + D ++ NT
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL---FHRV 454
+I +CK G + ++ K+L +ML G PD + ++ G + R+ A + R+
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEML-GNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRL 405
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV-SDGIGADSTTYTIIVEGLCDCD 513
+ C + LI L + +P A + ++ +G A TY ++E L CD
Sbjct: 406 KVDIPFEVC----DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
IEEA + + + D Y A++ LCR G EA + E+ DS V P+ F
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Query: 574 ILINCAC 580
L+ C
Sbjct: 522 ALVYGYC 528
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 201/541 (37%), Gaps = 69/541 (12%)
Query: 42 LHALCDSNRFSEAHQ--CFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
LH L S +F A Q C I L S + V + R+L S T W V ++
Sbjct: 120 LHILVSSKKFPLAMQFLCELIELTS------KKEEVDVFRVLVSATDECNWDPVVFDMLV 173
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K LV + R+F ++ + G +VV+ L+NG + +
Sbjct: 174 KGYLKLGLVE---------------EGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--V 217
D +V+ M G+ PN+ T+++L + + + + E+M E G + +
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFL----EKME---EEGFEPDL 271
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ LV S CR G E F + + + + + + V Y +I LCK GR A + +
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR 331
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M RG P + YN +I+ K+G + + T KV+VE
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ A + + LR+ VD +
Sbjct: 392 LLSAVNFV-VELRRLKVD----------------------------------IPFEVCDF 416
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I C+ G A +L ++ + ++ +I L ++EA L ++ +
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQ 476
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
N + TY ALI L ++ R +A + + M + DS +V G C ++
Sbjct: 477 NQVLD-AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDK 535
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSG-NFNEACHFLYELVDSGVSPNIFSYNILI 576
A+ I D Y +++K +C +G + +A + G PN + LI
Sbjct: 536 AERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Query: 577 N 577
Sbjct: 596 Q 596
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 13/267 (4%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S T ++A C ++ + L + VPD TC V++ +R L V L
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDA-HRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
K + ++ L+ C +P A H + ++ GH +Y LI
Sbjct: 403 RRLKVDIPFEVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
I +A + ++ ++ TY LI + + LM +++ +S V
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF-------DSEV 513
Query: 216 KVAAF--ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG-RYHGAA 272
K +F LV C+E F++ R+ + + + Y ++ ++C+ G Y A
Sbjct: 514 KPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKAL 573
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTK 299
+ M++ GFVP+ + Y+I L +
Sbjct: 574 ELQERMQRLGFVPNRLTCKYLIQVLEQ 600
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/522 (20%), Positives = 197/522 (37%), Gaps = 116/522 (22%)
Query: 74 NVLLARLLRSRTPLQTWALVRSLIV---AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIF 130
+++L L+R + L+ W LV ++ + + S +++ L+ + A R+
Sbjct: 104 DLVLGTLVRFKQ-LKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVL 162
Query: 131 FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQE 190
+ G PNV+SYT L+ Y G +A +F M SG EP+++TY ++++ ++
Sbjct: 163 SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG 222
Query: 191 RDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLA 250
+ E+ F L+D ++ P +
Sbjct: 223 DKFKEAEEV--------------------FETLLDE--------------KKSPLK---P 245
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
++ +Y MI K G Y A ++ M +G S V YN ++
Sbjct: 246 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---------------- 289
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
+++ + + ++D M R + Y + ++A
Sbjct: 290 -------------SFETSYKEVSKIYD---------QMQRSDIQPDVVSYALLIKAYGRA 327
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
ML++ R N +++ F +G V++A V + M + PD+ S
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDLWS 386
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+TT++S ++A+ ++ A F R+ +G P +VTY LI+G K VY M
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKV-DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
GI A+ T T I++ G C+ NF
Sbjct: 446 RLSGIKANQTILTTIMDA---------------------------------SGRCK--NF 470
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
A + E+ GV P+ + N+L++ A D EA ++
Sbjct: 471 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 512
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 142/356 (39%), Gaps = 45/356 (12%)
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
E+ + +I + K+G ++GA R++ + K G P+ + Y ++ + G C
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY+++++ +A EV + +L ++
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK------------------- 239
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+S + D + +I + K G+ ++A KV M+ GK V++
Sbjct: 240 -------------KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV-GKGVPQSTVTY 285
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+++S V + +D R + ++P VV+Y LI+ + +R +A V+ M+
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQR----SDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEA----KSFWHDVIWPSGIHDNFVYAAILKGLCRS 547
G+ Y I+++ +E+A KS D I+P D + Y +L +
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP----DLWSYTTMLSAYVNA 397
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
+ A F + G PNI +Y LI + + ++ +M+ +G+ +
Sbjct: 398 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
V+ + G P V++Y AL+ + + N+A ++ M S G + TY II++ + D
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 514 QIEEAKSFWHDVI--WPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ +EA+ + ++ S + D +Y ++ ++GN+ +A +V GV +
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSI 630
+YN L++ E +I +M+++ + PD V++ +L K G+ R+ E ++LS+
Sbjct: 284 TYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR----EEEALSV 336
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
+ E + + S PD + +L+ R+R + ++ ++ A G P+ Y
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA--GVRPTHKAY 352
Query: 111 HRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLE 170
+ L+D F + A +F M+ P++ SYTT+++ Y + + A K F +
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 171 SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
G EPN +TY LI+G + D+E M +++E+M + SG+K
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEK----MMEVYEKMRL---SGIKA 452
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 17/303 (5%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
F+ A + S+ GS P+ + L+ R A+ R + + P PS + Y
Sbjct: 155 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE--PSAITY 212
Query: 111 HRLMDQFCVFRRPCDAHRIF---FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
++ F + +A +F D K P+ Y +I Y G ARKVF
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVD 225
M+ GV +++TY+ L+ E + + K++++M S ++ V ++A L+
Sbjct: 273 MVGKGVPQSTVTYNSLM-------SFETSYKEVSKIYDQMQ---RSDIQPDVVSYALLIK 322
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
+ R E + EE+ G Y ++D+ G A + M++ P
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 382
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
Y ++ D + TY L++ DV+K EV
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 442
Query: 346 KLM 348
+ M
Sbjct: 443 EKM 445
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S A + A + R EA F L +G P H+ N+LL S Q + +S+
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ P L +Y ++ + A + F +K G PN+V+Y TLI GY
Sbjct: 376 --RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLI 184
+ +V+++M SG++ N + ++
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIM 461
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 178/429 (41%), Gaps = 45/429 (10%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P + + T++ G ++ + ++G+ PN +TY+++ + L R E+
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRK----PEI 183
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMI 259
+ ++ +A F LV L + I E++ +G + + VVY ++
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 260 DSLCKVGRYHGAARIVYEMKKR--GFVPSDVLYNYIIHGL---TKDGDCMRGYQXXXXXX 314
K G ++ E+K++ GFV V+Y ++ G + + M Y+
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
Y ++EAL D+A ++ + ++ + N+
Sbjct: 304 SKVRMSA-MAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLG----------- 351
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTT 433
T N ++NG+C G +EA++V + M G F C+PD +SF
Sbjct: 352 -------------------TFNVMVNGYCAGGKFEEAMEVFRQM--GDFKCSPDTLSFNN 390
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+++ L D + EA L+ M E ++P TY L+ +K + ++ Y +MV
Sbjct: 391 LMNQLCDNELLAEAEKLYGE-MEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVES 449
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
+ + Y + + L ++++AKSF+ D++ D+ Y I++ L +G +E
Sbjct: 450 NLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEM 508
Query: 554 CHFLYELVD 562
+ E++D
Sbjct: 509 LKIVDEMLD 517
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 196/508 (38%), Gaps = 92/508 (18%)
Query: 26 IATPSSPSLQHSIAT------TLH----ALCDSNRFSEAHQCFSISLASGSVPDHRTCNV 75
I P+ P L S++ LH L N EA S+ S P T N
Sbjct: 76 IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNT 135
Query: 76 LLARLLRSRTPLQTWALVR-SLIVAKPGFVPSLVNYHRLMDQFCVFRRP---CDAHRIFF 131
+LA LR + AL++ + + G P+++ Y+ + + R+P + +++F
Sbjct: 136 VLAAQLRQ---AKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFI 192
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
D N P++ ++ L+ G S + A ++ ++M G + + YS L+ G ++
Sbjct: 193 D--NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNS 250
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
D +G +L +L E++ V+ GV + L+ + E EE + S
Sbjct: 251 DADGVLKLYQELKEKLGGFVDDGV---VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 252 --EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ Y ++++L + G++ A ++ +KK P + N
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNL----------------- 350
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
T+ V+V C ++A EV +
Sbjct: 351 -------------GTFNVMVNGYCAGGKFEEAMEVFR----------------------- 374
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
M + +C D ++ N ++N C + EA K+ +M K PD
Sbjct: 375 ------------QMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM-EEKNVKPDEY 421
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ ++ ++DE +++ M E+ LRP + YN L L K + +DA +
Sbjct: 422 TYGLLMDTCFKEGKIDEGA-AYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDM 480
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEE 517
MVS + D Y I+ L + +++E
Sbjct: 481 MVSK-LKMDDEAYKFIMRALSEAGRLDE 507
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
+ T ++ G ++++A+++ +DM + F D V ++ ++ G + + D L+
Sbjct: 201 IATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVV-DPVVYSYLMMGCVKNSDADGVLKLY 259
Query: 452 HRVMPE-NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG--IGADSTTYTIIVEG 508
+ + G V Y L++G + + +A Y V + + + Y ++E
Sbjct: 260 QELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEA 319
Query: 509 LCDCDQIEEAKSFWHDVIW----PSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDS 563
L + + +EA + V P + N + ++ G C G F EA ++ D
Sbjct: 320 LSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDF 379
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
SP+ S+N L+N C +L +EA ++ EM++ + PD T+ +L
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 101/270 (37%), Gaps = 47/270 (17%)
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
S CR + T+NTV+ + AL L + AP+++++ + LD + +
Sbjct: 124 SNCRPTIFTVNTVLAAQLRQAKYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPE 182
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
A + + + L P + T+ L++GL A + M G D Y+ +
Sbjct: 183 IALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYL 242
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSG--IHDNFVYAAILKG-------------------- 543
+ G + + ++ G + D VY ++KG
Sbjct: 243 MMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGE 302
Query: 544 -----------------LCRSGNFNEACHFLYELVDSGVSP------NIFSYNILINCAC 580
L +G F+EA L++ V +P N+ ++N+++N C
Sbjct: 303 NSKVRMSAMAYNYVLEALSENGKFDEALK-LFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 581 HLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
EA ++ R+M +PD +++ L
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 428 VVSFTTVISGLLDATRVDEAFDLFHRVMPE-NGLRPCVV---TYNALIRGLYKLKRPNDA 483
+++ V+ L + + DEA LF V E N R V T+N ++ G + +A
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG 543
V+ M D+ ++ ++ LCD + + EA+ + ++ + D + Y ++
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+ G +E + +V+S + PN+ YN L
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 108/263 (41%), Gaps = 43/263 (16%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L AL ++ +F EA + F + P H N
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVN--------------------------- 349
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
L ++ +++ +C + +A +F M + P+ +S+ L+N C + +A
Sbjct: 350 -----LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEA 404
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
K++ EM E V+P+ TY +L+ +E ++ G ++ M VES ++ +A
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG----AAYYKTM---VESNLRPNLAV 457
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ L D L + G ++ + + + + +E Y ++ +L + GR +IV EM
Sbjct: 458 YNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEML 516
Query: 280 KRGFVP-SDVLYNYIIHGLTKDG 301
V S+ L ++ L K G
Sbjct: 517 DDDTVRVSEELQEFVKEELRKGG 539
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 5/285 (1%)
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
L+ +LC V+ A+E V + Y+I +R MLE
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDE 446
C D++ N +++ CK+G VD K+ Q+M G PD SF I DA V
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEM--GNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A+ + R M L P V T+N +I+ L K ++ +DA+ + M+ G D+ TY I+
Sbjct: 297 AYKVLDR-MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
CD ++ A + + D Y +LK L R G F+ A + +
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 567 PNIFSYNILINCACHLDLK-SEAYQIVREMKKNGLNPDCVTWRIL 610
P + +Y ++I+ K EA + M G+ P T +L
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 43/349 (12%)
Query: 123 PCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSV 182
P +A R F M G P V L++ C + A++ F + G+ P++ TYS+
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 183 LIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEE 242
L+RG + RD G R++ ++ ER V V + A+ L+D+LC+ G + +++ +E
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCV-----VDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ G + + I + C G H A +++ MK+ VP+ +N+II L K+
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
Y TY ++ C +V++A ++L M R
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR------------ 376
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
++C D T N V+ + G D A ++ + M K
Sbjct: 377 -----------------------TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 423 FCAPDVVSFTTVISGLLDAT-RVDEAFDLFHRVMPENGLRPCVVTYNAL 470
F P V ++T +I GL+ +++EA F +M + G+ P T L
Sbjct: 414 F-YPTVATYTVMIHGLVRKKGKLEEACRYFE-MMIDEGIPPYSTTVEML 460
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 23/266 (8%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
LH+LCD + A + F + G VP +T ++L ++ WA +R A+
Sbjct: 180 LHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL----------VRGWARIRDASGARK 229
Query: 102 GF--------VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
F V L+ Y+ L+D C +++F +M N G P+ S+ I+ YC
Sbjct: 230 VFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G + A KV D M + PN T++ +I+ + + ++ L+ ++ ++ +
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM-----IQKGA 344
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ +++ C N ++ + L + Y ++ L ++GR+ A
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTK 299
I M +R F P+ Y +IHGL +
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVR 430
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 120/319 (37%), Gaps = 41/319 (12%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + + +L+ C + A F K G P+ +Y+ L+ G+ + A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
RKVFDEMLE + L Y+ L+ + + D++GG
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG------------------------- 262
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+++ +E+ G + + I + C G H A +++ MK+
Sbjct: 263 ---------------YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRY 307
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
VP+ +N+II L K+ Y TY ++ C +V++A
Sbjct: 308 DLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
++L M R + + YN+ L+ M E + V T +I+G
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG 427
Query: 402 FC-KTGSVDEALKVLQDML 419
K G ++EA + + M+
Sbjct: 428 LVRKKGKLEEACRYFEMMI 446
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
F V A EA F+R M E G++PCV + L+ L K N A +
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNR-MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
GI + TY+I+V G A+ + +++ + + D Y A+L LC+SG+
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ E+ + G+ P+ +S+ I I+ C AY+++ MK+ L P+ T+
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
P V ++ L D V+ A + F + G+ P TY+ L+RG +++ + A
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKA-KGFGIVPSAKTYSILVRGWARIRDASGARK 229
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
V+ M+ D Y +++ LC ++ + ++ D + +A + C
Sbjct: 230 VFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
+G+ + A L + + PN++++N +I C + +AY ++ EM + G NPD
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTW 349
Query: 606 TW 607
T+
Sbjct: 350 TY 351
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
C + +LNT+IN G +++A K D P+ VSF +I G LD + A
Sbjct: 147 CVRTIQSLNTLINVLVDNGELEKA-KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAA 205
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
+F ++ E ++P VVTYN+LI L + A + M+ I ++ T+ ++++
Sbjct: 206 CKVFDEML-EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVS 566
GLC + EAK D+ + G V Y ++ L + G +EA L E+ +
Sbjct: 265 GLCCKGEYNEAKKLMFDMEY-RGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
P++ YNIL+N C EAY+++ EM+ G P+ T+R++
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 129/306 (42%), Gaps = 41/306 (13%)
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
+ S TLIN G + A+ FD + + PNS+++++LI+G L + D E C
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAA----C 206
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
K+++ M +E+E V + +L+ LCR + + E++ + V +G ++
Sbjct: 207 KVFDEM-LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
LC G Y+ A +++++M+ RG P V Y ++ L K G
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG-------------------- 305
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
+D+A+ +L M ++ IYNI +
Sbjct: 306 ---------------RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M C+ + T +I+GFC+ D L VL ML + C P +F +++GL+
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC-PTPATFVCMVAGLIKG 409
Query: 442 TRVDEA 447
+D A
Sbjct: 410 GNLDHA 415
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 151/365 (41%), Gaps = 2/365 (0%)
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
++++L+ L + F+ V +I + + E ++ +I K G A + +++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
V + N +I+ L +G+ + ++ +L++ D
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
+ A +V ML E YN + M++ + R + +T +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+ G C G +EA K++ DM + C P +V++ ++S L R+DEA L M +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEY-RGCKPGLVNYGILMSDLGKRGRIDEA-KLLLGEMKKR 320
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEA 518
++P VV YN L+ L R +A+ V + M G ++ TY ++++G C + +
Sbjct: 321 RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Query: 519 KSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
+ + ++ + ++ GL + GN + AC L + +S ++ L++
Sbjct: 381 LNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSD 440
Query: 579 ACHLD 583
C D
Sbjct: 441 LCIKD 445
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 105 PSLVNYHRLMDQF---CVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
P+ V+++ L+ F C + C ++F +M P+VV+Y +LI C +G A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAAC---KVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ + ++M++ + PN++T+ +L++G
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKG----------------------------------- 265
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
LC +G +NE ++ ++ +G V YG ++ L K GR A ++ EMKKR
Sbjct: 266 -----LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR 320
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
P V+YN +++ L + Y+ TY+++++ C + D D
Sbjct: 321 RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Query: 342 REVLKLML 349
VL ML
Sbjct: 381 LNVLNAML 388
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
F +I A VD+A D+FH++ + +R + + N LI L A +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 491 VSDGIGADSTTYTIIVEGLCD-CDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSG 548
+ +S ++ I+++G D CD K F D + + + V Y +++ LCR+
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVF--DEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ +A L +++ + PN ++ +L+ C +EA +++ +M+ G P V +
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 609 ILHKIQGK 616
IL GK
Sbjct: 296 ILMSDLGK 303
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P LVNY LM R +A + +MK R P+VV Y L+N C+ + +A
Sbjct: 286 GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
+V EM G +PN+ TY ++I G + D + G
Sbjct: 346 YRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D S++++I L + D A D R++ +R + LI+ K + A V
Sbjct: 80 DYPSYSSLIYKLAKSRNFD-AVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDV 138
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
+ + S + ++ L D ++E+AKSF+ ++ + ++KG
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
++ AC E+++ V P++ +YN LI C D +A ++ +M K + P+ VT
Sbjct: 199 KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 607 WRILHK 612
+ +L K
Sbjct: 259 FGLLMK 264
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P +V Y+ L++ C R +A+R+ +M+ +G PN +Y +I+G+C + V
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
+ ML S P T+ ++ G+++ +L+ C + E M + S A+ NL+
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHA----CFVLEVMGKKNLS-FGSGAWQNLL 438
Query: 225 DSLC 228
LC
Sbjct: 439 SDLC 442
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/522 (20%), Positives = 197/522 (37%), Gaps = 116/522 (22%)
Query: 74 NVLLARLLRSRTPLQTWALVRSLIV---AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIF 130
+++L L+R + L+ W LV ++ + + S +++ L+ + A R+
Sbjct: 111 DLVLGTLVRFKQ-LKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVL 169
Query: 131 FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQE 190
+ G PNV+SYT L+ Y G +A +F M SG EP+++TY ++++ ++
Sbjct: 170 SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG 229
Query: 191 RDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLA 250
+ E+ F L+D ++ P +
Sbjct: 230 DKFKEAEEV--------------------FETLLDE--------------KKSPLK---P 252
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
++ +Y MI K G Y A ++ M +G S V YN ++
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---------------- 296
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
+++ + + ++D M R + Y + ++A
Sbjct: 297 -------------SFETSYKEVSKIYD---------QMQRSDIQPDVVSYALLIKAYGRA 334
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
ML++ R N +++ F +G V++A V + M + PD+ S
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDLWS 393
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+TT++S ++A+ ++ A F R+ +G P +VTY LI+G K VY M
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRI-KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNF 550
GI A+ T T I++ G C+ NF
Sbjct: 453 RLSGIKANQTILTTIMDA---------------------------------SGRCK--NF 477
Query: 551 NEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
A + E+ GV P+ + N+L++ A D EA ++
Sbjct: 478 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 519
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 143/356 (40%), Gaps = 45/356 (12%)
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
E+ + +I + K+G ++GA R++ + K G P+ + Y ++ + G C
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
TY+++++ +A EV + +L ++
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK------------------- 246
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
+S + D + +I + K G+ ++A KV M+ GK V++
Sbjct: 247 -------------KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV-GKGVPQSTVTY 292
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+++S V + +D R + ++P VV+Y LI+ + +R +A V+ M+
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQR----SDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFW----HDVIWPSGIHDNFVYAAILKGLCRS 547
G+ Y I+++ +E+AK+ + D I+P D + Y +L +
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP----DLWSYTTMLSAYVNA 404
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
+ A F + G PNI +Y LI + + ++ +M+ +G+ +
Sbjct: 405 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
V+ + G P V++Y AL+ + + N+A ++ M S G + TY II++ + D
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 514 QIEEAKSFWHDVI--WPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ +EA+ + ++ S + D +Y ++ ++GN+ +A +V GV +
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSI 630
+YN L++ E +I +M+++ + PD V++ +L K G+ R+ E ++LS+
Sbjct: 291 TYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR----EEEALSV 343
Query: 631 NYEGQD 636
E D
Sbjct: 344 FEEMLD 349
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
+ E + + S PD + +L+ R+R + ++ ++ A G P+ Y
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA--GVRPTHKAY 359
Query: 111 HRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLE 170
+ L+D F + A +F M+ P++ SYTT+++ Y + + A K F +
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 171 SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
G EPN +TY LI+G + D+E M +++E+M + SG+K
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEK----MMEVYEKMRL---SGIKA 459
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S A + A + R EA F L +G P H+ N+LL S Q + +S+
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+ P L +Y ++ + A + F +K G PN+V+Y TLI GY
Sbjct: 383 --RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLI 184
+ +V+++M SG++ N + ++
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 17/303 (5%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
F+ A + S+ GS P+ + L+ R A+ R + + P PS + Y
Sbjct: 162 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE--PSAITY 219
Query: 111 HRLMDQFCVFRRPCDAHRIF---FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
++ F + +A +F D K P+ Y +I Y G ARKVF
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVD 225
M+ GV +++TY+ L+ E + + K++++M S ++ V ++A L+
Sbjct: 280 MVGKGVPQSTVTYNSLM-------SFETSYKEVSKIYDQMQ---RSDIQPDVVSYALLIK 329
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
+ R E + EE+ G Y ++D+ G A + M++ P
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 389
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
Y ++ D + TY L++ DV+K EV
Sbjct: 390 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 449
Query: 346 KLM 348
+ M
Sbjct: 450 EKM 452
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 113/582 (19%), Positives = 217/582 (37%), Gaps = 58/582 (9%)
Query: 34 LQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALV 93
+ H+I L A ++S+A F + + PD T N+++ L + Q L
Sbjct: 249 VTHNI--VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
S+ + P +V + +M + V + +F M G PN+VSY L+ Y
Sbjct: 307 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 366
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G G A V ++ ++G+ P+ ++Y+ L+ + R +E+ M +
Sbjct: 367 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-----MMRKERR 421
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
V + L+D+ GF E I ++ G V ++ + + +
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
++ + RG + YN I + + T+ +L+ C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+ +A LK M E + +Y
Sbjct: 542 RMSKYPEAISYLKEM---EDLSIPLTKEVY------------------------------ 568
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
++V+ + K G V EA + M M C PDV+++T+++ + + +A +LF
Sbjct: 569 --SSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M NG+ P + +AL+R K +P++ F + M I T + E C+
Sbjct: 626 -MEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTGAVFFEIFSACN 681
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYA-------AILKGLCRSGNFNEACHFLYELVDSGVS 566
++E W I + D ++ + +L +SG Y+++ SGV
Sbjct: 682 TLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVG 737
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
N+ +Y IL+ + + +++ M G+ P +R
Sbjct: 738 INLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 779
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/528 (20%), Positives = 202/528 (38%), Gaps = 97/528 (18%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A +FF+M+ P+ +Y LIN + G A + D+ML + + P+ TY+
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN--- 217
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
NL+++ G + E + +++
Sbjct: 218 -------------------------------------NLINACGSSGNWREALEVCKKMT 240
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV-PSDVLYNYIIHGLTKDG-- 301
G + ++V ++ S K GR + A +E+ K V P +N II+ L+K G
Sbjct: 241 DNG-VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 302 -------DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
+ MR + H Y V E ++ R V + M+ EG+
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE-------IENCRAVFEAMV-AEGL 351
Query: 355 DKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
+ YN + A + ++ DV++ ++N + ++ +A +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT------- 466
V M+ + P+VV++ +I + EA ++F R M ++G++P VV+
Sbjct: 412 VFL-MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF-RQMEQDGIKPNVVSVCTLLAA 469
Query: 467 ----------------------------YNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
YN+ I A +Y SM + AD
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
S T+TI++ G C + EA S+ ++ S VY+++L + G EA
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
++ +G P++ +Y +++ + +A ++ EM+ NG+ PD +
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLM-LRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
+ VL+ L ++ V K M ++K + IYN+ +R
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFE 168
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M + C+ D T + +IN + G A+ ++ DML AP ++ +I+ +
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAI-APSRSTYNNLINACGSSG 227
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
EA ++ + M +NG+ P +VT+N ++ ++ + A + M + D+TT+
Sbjct: 228 NWREALEVCKK-MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSG--IHDNFVYAAILKGLCRSGNFNEACHFLYE- 559
II+ L Q +A ++ + D + +I+ G E C ++E
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI-ENCRAVFEA 345
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
+V G+ PNI SYN L+ + A ++ ++K+NG+ PD V++ L G+ R+
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 160/430 (37%), Gaps = 73/430 (16%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
Y +I++ + G++ A ++ +M + PS YN +I+ G+ +
Sbjct: 180 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 239
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
T+ +++ A KA +LM + T +NI +
Sbjct: 240 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 374 XXXXXXXXSMLE--SQCRADVITLNTVINGFCKTGSVDEALKVLQDM------------- 418
SM E ++CR DV+T ++++ + G ++ V + M
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 419 -LMGKFCA--------------------PDVVSFTTVI---------------------- 435
LMG + PDVVS+T ++
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 436 ---------SGLLDATRVD----EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
+ L+DA + EA ++F R M ++G++P VV+ L+ + K+ +
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIF-RQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
V S+ S GI ++ Y + + ++E+A + + + D+ + ++
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G CR + EA +L E+ D + Y+ ++ +EA I +MK G P
Sbjct: 539 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 598
Query: 603 DCVTW-RILH 611
D + + +LH
Sbjct: 599 DVIAYTSMLH 608
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 6/276 (2%)
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
VD+AR + M + Y+ + A ML + T N
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+IN +G+ EAL+V + M PD+V+ V+S + +A F +M
Sbjct: 219 LINACGSSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKG 276
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG--ADSTTYTIIVEGLCDCDQI 515
+RP T+N +I L KL + + A +++SM D T+T I+ +I
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 516 EEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
E ++ + ++ G+ N V Y A++ G A L ++ +G+ P++ SY
Sbjct: 337 ENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L+N +A ++ M+K P+ VT+ L
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 2/218 (0%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
MLE DV+T N V+ + G D ++L +M+ F +PD+ ++ ++ L
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF-SPDLYTYNILLHHLATG 305
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
+ A +L + M E G+ P V+ + LI GL + + V G D
Sbjct: 306 NKPLAALNLLNH-MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT+++ G ++E+A+ + ++ + + F Y ++++G C +G F EAC L E+
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
G +PN Y+ L+N + EA+++V++M + G
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
+HS LH+L ++ + L G PD T N+++ R + + L+
Sbjct: 222 KHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLD 281
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
++ K GF P L Y+ L+ +P A + M+ G P V+ +TTLI+G
Sbjct: 282 EMV--KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
G + + DE ++ G P+ + Y+V+I G + +LE E+ ++ E+ +
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP---- 395
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
V + +++ C G F E + +E+ +G VVY ++++L G+ A +
Sbjct: 396 -NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 275 VYEMKKRG 282
V +M ++G
Sbjct: 455 VKDMVEKG 462
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
V + ML F PDV+++ V+ + D + L M ++G P + TYN L+
Sbjct: 244 VYEQMLEDGF-TPDVLTYNIVMFANFRLGKTDRLYRLLDE-MVKDGFSPDLYTYNILLHH 301
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
L +P A + + M G+ +T +++GL ++E K F + + D
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
Y ++ G G +A E+ + G PN+F+YN +I C EA +++
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 594 EMKKNGLNPDCVTWRIL 610
EM+ G NP+ V + L
Sbjct: 422 EMESRGCNPNFVVYSTL 438
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 151/383 (39%), Gaps = 74/383 (19%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
YH LM F R+ +M G+ ++ LI C+ G G AR V ++ +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 170 ESGV---EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV-------KVAA 219
+S P +Y+ ++ +L + + L+ ++E+M +E G +
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYK----LIDWVYEQM---LEDGFTPDVLTYNIVM 264
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
FAN R G + ++R+ +E+ G + Y ++ L + A ++ M+
Sbjct: 265 FANF-----RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMR 319
Query: 280 KRGFVPSDVLYNYIIHGLTKDGD---CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
+ G P + + +I GL++ G C C Y V++
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC---YTVMITGYISGG 376
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+++KA E+ K M K + +V T N
Sbjct: 377 ELEKAEEMFKEMTEKGQL-----------------------------------PNVFTYN 401
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
++I GFC G EA +L++M + C P+ V ++T+++ L +A +V EA ++ + M
Sbjct: 402 SMIRGFCMAGKFKEACALLKEM-ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVV-KDMV 459
Query: 457 ENGLRPCVVTYNALIRGLYKLKR 479
E G Y LI L K +R
Sbjct: 460 EKG------HYVHLISKLKKYRR 476
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/582 (19%), Positives = 217/582 (37%), Gaps = 58/582 (9%)
Query: 34 LQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALV 93
+ H+I L A ++S+A F + + PD T N+++ L + Q L
Sbjct: 117 VTHNI--VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
S+ + P +V + +M + V + +F M G PN+VSY L+ Y
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 234
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G G A V ++ ++G+ P+ ++Y+ L+ + R +E+ M +
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-----MMRKERR 289
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
V + L+D+ GF E I ++ G V ++ + + +
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
++ + RG + YN I + + T+ +L+ C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+ +A LK M E + +Y
Sbjct: 410 RMSKYPEAISYLKEM---EDLSIPLTKEVY------------------------------ 436
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
++V+ + K G V EA + M M C PDV+++T+++ + + +A +LF
Sbjct: 437 --SSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVIAYTSMLHAYNASEKWGKACELFLE 493
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M NG+ P + +AL+R K +P++ F + M I T + E C+
Sbjct: 494 -MEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTGAVFFEIFSACN 549
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYA-------AILKGLCRSGNFNEACHFLYELVDSGVS 566
++E W I + D ++ + +L +SG Y+++ SGV
Sbjct: 550 TLQE----WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVG 605
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
N+ +Y IL+ + + +++ M G+ P +R
Sbjct: 606 INLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 647
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/528 (20%), Positives = 202/528 (38%), Gaps = 97/528 (18%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A +FF+M+ P+ +Y LIN + G A + D+ML + + P+ TY+
Sbjct: 29 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN--- 85
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
NL+++ G + E + +++
Sbjct: 86 -------------------------------------NLINACGSSGNWREALEVCKKMT 108
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV-PSDVLYNYIIHGLTKDG-- 301
G + ++V ++ S K GR + A +E+ K V P +N II+ L+K G
Sbjct: 109 DNG-VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 302 -------DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
+ MR + H Y V E ++ R V + M+ EG+
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE-------IENCRAVFEAMV-AEGL 219
Query: 355 DKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
+ YN + A + ++ DV++ ++N + ++ +A +
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT------- 466
V M+ + P+VV++ +I + EA ++F R M ++G++P VV+
Sbjct: 280 VFL-MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF-RQMEQDGIKPNVVSVCTLLAA 337
Query: 467 ----------------------------YNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
YN+ I A +Y SM + AD
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
S T+TI++ G C + EA S+ ++ S VY+++L + G EA
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
++ +G P++ +Y +++ + +A ++ EM+ NG+ PD +
Sbjct: 458 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 6/276 (2%)
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
+ ++K + IYN+ +R M + C+ D T + +IN + G
Sbjct: 1 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
A+ ++ DML AP ++ +I+ + EA ++ + M +NG+ P +VT
Sbjct: 61 QWRWAMNLMDDMLRAAI-APSRSTYNNLINACGSSGNWREALEVCKK-MTDNGVGPDLVT 118
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
+N ++ ++ + A + M + D+TT+ II+ L Q +A ++ +
Sbjct: 119 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 178
Query: 527 WPSG--IHDNFVYAAILKGLCRSGNFNEACHFLYE-LVDSGVSPNIFSYNILINCACHLD 583
D + +I+ G E C ++E +V G+ PNI SYN L+
Sbjct: 179 EKRAECRPDVVTFTSIMHLYSVKGEI-ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 584 LKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
+ A ++ ++K+NG+ PD V++ L G+ R+
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 160/430 (37%), Gaps = 73/430 (16%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
Y +I++ + G++ A ++ +M + PS YN +I+ G+ +
Sbjct: 48 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 107
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
T+ +++ A KA +LM + T +NI +
Sbjct: 108 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 374 XXXXXXXXSMLE--SQCRADVITLNTVINGFCKTGSVDEALKVLQDM------------- 418
SM E ++CR DV+T ++++ + G ++ V + M
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 419 -LMGKFCA--------------------PDVVSFTTVI---------------------- 435
LMG + PDVVS+T ++
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 436 ---------SGLLDATRVD----EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
+ L+DA + EA ++F R M ++G++P VV+ L+ + K+ +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIF-RQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
V S+ S GI ++ Y + + ++E+A + + + D+ + ++
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G CR + EA +L E+ D + Y+ ++ +EA I +MK G P
Sbjct: 407 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 466
Query: 603 DCVTW-RILH 611
D + + +LH
Sbjct: 467 DVIAYTSMLH 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 6/276 (2%)
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
VD+AR + M + Y+ + A ML + T N
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+IN +G+ EAL+V + M PD+V+ V+S + +A F +M
Sbjct: 87 LINACGSSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKG 144
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG--ADSTTYTIIVEGLCDCDQI 515
+RP T+N +I L KL + + A +++SM D T+T I+ +I
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 516 EEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
E ++ + ++ G+ N V Y A++ G A L ++ +G+ P++ SY
Sbjct: 205 ENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L+N +A ++ M+K P+ VT+ L
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 9/201 (4%)
Query: 103 FVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDAR 162
F P + Y+ L+ C+F + DA ++ ++K GH P+ +Y LI G C + DA
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 163 KVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA--AF 220
+++ EM +G P+++ Y+ L+ G L+ R + C+L+E+M V+ GV+ + +
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA----CQLFEKM---VQEGVRASCWTY 397
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
L+D L R G F + +L +G + + + + LC+ G+ GA ++V EM+
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 281 RGFVPSDVLYNYIIHGLTKDG 301
RGF V + ++ G K G
Sbjct: 458 RGFSVDLVTISSLLIGFHKQG 478
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 170/416 (40%), Gaps = 30/416 (7%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
A++ + ++CR G EV + + G ++ + ++DSL + G++ A ++
Sbjct: 92 ATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLV------ 329
M++ G + +Y+ ++ L K + D T +V++
Sbjct: 152 YMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 330 -----EALCHVFDVDKAREVLKLMLRKEGVDK----TRIYNIYLRAXXXXXXXXXXXXXX 380
E L + D E ++ + +G+ + T YNI +
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 381 XSMLE------SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M E S D+ T N++I+ C G +AL ++ D L PD ++ +
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL-IVWDELKVSGHEPDNSTYRIL 330
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
I G + R+D+A ++ M NG P + YN L+ G K ++ +A ++ MV +G
Sbjct: 331 IQGCCKSYRMDDAMRIYGE-MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 495 IGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEAC 554
+ A TY I+++GL + E + + D+ D ++ + LCR G A
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 555 HFLYELVDSGVSPNIFSYNILI---NCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ E+ G S ++ + + L+ + D K + + +RE L P+ + W
Sbjct: 450 KLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE---GNLVPNVLRW 502
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
+ +N ++ G + E +V + + K D S+ I G +D A LF
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 452 HRVMPENGLR-----PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
+ + + P + TYN+LI L + DA V+ + G D++TY I++
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILI 331
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+G C ++++A + ++ + + D VY +L G ++ EAC ++V GV
Sbjct: 332 QGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL-------HKIQGKVRK 619
+ ++YNILI+ + + ++KK G D +T+ I+ K++G V+
Sbjct: 392 ASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKL 451
Query: 620 QTLSEYQSLSIN 631
E + S++
Sbjct: 452 VEEMETRGFSVD 463
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 5/190 (2%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P Y L+ C R DA RI+ +M+ G P+ + Y L++G + +A
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++F++M++ GV + TY++LI G+ + E G L C L ++ V F+
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF-----VDAITFS 433
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+ LCREG ++ EE+ +G + V ++ K GR+ +++ +++
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREG 493
Query: 282 GFVPSDVLYN 291
VP+ + +N
Sbjct: 494 NLVPNVLRWN 503
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 329 VEALCHVFDVDKAREVLKLMLRK-------------EGVDKTRI----YNIYLRAXXXXX 371
VEA FDVD L + L K G+ T + YN + +
Sbjct: 585 VEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKG 644
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M E+ C AD+ T N +I G K G D A VL D L + D+V +
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL-DRLTKQGGYLDIVMY 703
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
T+I+ L ATR+DEA LF M NG+ P VV+YN +I K + +A+ +M+
Sbjct: 704 NTLINALGKATRLDEATQLFDH-MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762
Query: 492 SDGIGADSTTYTII 505
G + T TI+
Sbjct: 763 DAGCLPNHVTDTIL 776
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N++++ F K G A VL D + FCA D+ ++ +I GL R D A + R
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVL-DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ + G +V YN LI L K R ++A ++ M S+GI D +Y ++E
Sbjct: 691 LTKQGGYLD-IVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
+++EA + ++ +G N V IL L +
Sbjct: 750 KLKEAYKYLKAML-DAGCLPNHVTDTILDYLGK 781
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 466 TYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDV 525
TYN+++ K A GV M + AD TY +I++GL + + A + +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 526 IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLK 585
G D +Y ++ L ++ +EA + +G++P++ SYN +I
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 586 SEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
EAY+ ++ M G P+ VT IL + ++ K
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEK 785
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 156/443 (35%), Gaps = 24/443 (5%)
Query: 56 QCFSISLASGSVPDHRTCNVLLARLLR-SRTPLQTWALVRSLIVAKPGFVPSLVNYHRLM 114
Q + SL + S+P V+L L R S P + R +PG+ S Y ++
Sbjct: 42 QSGTRSLDANSIPISEP--VVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIF 99
Query: 115 DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE 174
C + + MK G + L++ G A V D M E G
Sbjct: 100 RTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDC 159
Query: 175 PNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK----------VAAFANLV 224
N Y ++ ++++ +L ++ KL E + A L+
Sbjct: 160 LNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELL 219
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLA-EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG- 282
L R +E R+ E+L + Y I G A + EMK+R
Sbjct: 220 VGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSS 279
Query: 283 -----FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
F P YN +IH L G + TY++L++ C +
Sbjct: 280 VYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+D A + M V T +YN L M++ RA T N
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 398 VINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+I+G + G + + D+ G+F D ++F+ V L +++ A L M
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFV--DAITFSIVGLQLCREGKLEGAVKLVEE-ME 456
Query: 457 ENGLRPCVVTYNALIRGLYKLKR 479
G +VT ++L+ G +K R
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGR 479
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 2/250 (0%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY VL+ C V ++ +A + M+ + +N+ L M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+V + +I FCK S++ A++ DM+ PD +T +I+G +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL-QPDAAVYTCLITGFGTQKK 418
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+D ++L + M E G P TYNALI+ + K P A +Y+ M+ + I T+
Sbjct: 419 LDTVYELL-KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 477
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+I++ E ++ W ++I D+ Y +++GL G EAC +L E++D
Sbjct: 478 MIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Query: 564 GVSPNIFSYN 573
G+ + YN
Sbjct: 538 GMKTPLIDYN 547
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 23/248 (9%)
Query: 71 RTCNVLLARLLRSRTP--------LQTWALVRSLIVAK--------PGFVPSLVNYHRLM 114
+ VL +L TP L W VR+LI A G P +V ++ ++
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 115 DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE 174
+ R+ DA ++F MK++G CPNV SYT +I +C + A + FD+M++SG++
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 175 PNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFN 234
P++ Y+ LI G ++ L+ EL+ ++ E+ + L+ + +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-----GHPPDGKTYNALIKLMANQKMPE 455
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY-EMKKRGFVPSDVLYNYI 293
RI ++ Q + + MI + R + R V+ EM K+G P D Y +
Sbjct: 456 HATRIYNKM-IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 294 IHGLTKDG 301
I GL +G
Sbjct: 515 IRGLIGEG 522
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 6/290 (2%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY ++ L + VL+ M K G+ + I ++A M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ + + V T+N +++ + EA +VL D L +F P+++++T +++G
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERF-TPNMMTYTVLLNGWCRVRN 313
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ EA +++ M + GL+P +V +N ++ GL + ++ +DA ++ M S G + +YT
Sbjct: 314 LIEAARIWND-MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++ C +E A ++ D++ SG+ D VY ++ G + L E+ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMV-DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
G P+ +YN LI + + A +I +M +N + P T+ ++ K
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 37/259 (14%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L+ + +++T ++NG+C+ ++ EA ++ DM+ + PD+V+ ++ GLL + +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DQGLKPDIVAHNVMLEGLLRSRK 348
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+A LFH VM G P V +Y +IR K A + MV G+ D+ YT
Sbjct: 349 KSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAA------------------------ 539
++ G +++ ++ D Y A
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 540 -----------ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
I+K + N+ E++ G+ P+ SY +LI EA
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 589 YQIVREMKKNGLNPDCVTW 607
+ + EM G+ + +
Sbjct: 528 CRYLEEMLDKGMKTPLIDY 546
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
++N +++ CK V++A VL + + P+ +F I G A RV+EA
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M +G RPCV++Y +IR + + + S M ++G +S TYT I+ L
Sbjct: 250 -MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK 308
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH-FLYELVDSGVSPNIFSY 572
+ EEA + D+ Y ++ L R+G EA F E+ + GVS N +Y
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGL-NPDCVTWRIL 610
N +I CH D + +A ++++EM+ + L NPD T++ L
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 125/331 (37%), Gaps = 7/331 (2%)
Query: 202 KLWERMS--VEVESGVKVAAF---ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
K W+RM VE G K+ A ++ G + E I + L G
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMN 194
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
++D+LCK R AR+V K P+ +N IHG K
Sbjct: 195 LLLDTLCKEKRVE-QARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGH 253
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
C +Y ++ C F+ K E+L M + Y + +
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
M S C+ D + N +I+ + G ++EA +V + + + + ++ ++I+
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG-I 495
D+A +L + N P V TY L+R +K + + MV+ +
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
D +TYT +++ LC + E A + ++I
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMI 464
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 19/305 (6%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
+++A + + + EA F G + + N+LL L + + Q +
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV--- 212
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
L+ K P+ ++ + +C R +A +MK G P V+SYTT+I YC
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
++ EM +G PNS+TY+ ++ + +++ E + ++ SG
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-------KRSGC 325
Query: 216 KV-AAFAN-LVDSLCREGFFNE---VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG 270
K + F N L+ +L R G E VFR+ E+P G Y MI C
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRV--EMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 271 AARIVYEMKKRGFVPSDV-LYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVL 328
A ++ EM+ DV Y ++ K GD + + D TY L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 329 VEALC 333
++ LC
Sbjct: 444 IQRLC 448
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/376 (17%), Positives = 141/376 (37%), Gaps = 40/376 (10%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
++ + G +A +FD + E G+E N+ + ++L+ + +E+ +E R ++ +L +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHI 220
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+ + F + C+ E +E+ G + Y +I C+
Sbjct: 221 TPNAHT------FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
+ ++ EM+ G P+ + Y I+ L + + Y
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
L+ L +++A V ++ + + GV
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVS-------------------------------- 362
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
+ T N++I +C D+A+++L++M C PDV ++ ++ V E
Sbjct: 363 --INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV 420
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
L ++ ++ L TY LI+ L + A+ ++ M+S I T +++E
Sbjct: 421 GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
Query: 508 GLCDCDQIEEAKSFWH 523
+ + E A+ H
Sbjct: 481 EVKKKNMHESAERIEH 496
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAI 540
+A G++ + G+ ++ + ++++ LC ++E+A+ + S I N +
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIF 230
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ G C++ EA + E+ G P + SY +I C C + Y+++ EM+ NG
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 601 NPDCVTW 607
P+ +T+
Sbjct: 291 PPNSITY 297
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
++N +++ CK V++A VL + + P+ +F I G A RV+EA
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M +G RPCV++Y +IR + + + S M ++G +S TYT I+ L
Sbjct: 250 -MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQK 308
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACH-FLYELVDSGVSPNIFSY 572
+ EEA + D+ Y ++ L R+G EA F E+ + GVS N +Y
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGL-NPDCVTWRIL 610
N +I CH D + +A ++++EM+ + L NPD T++ L
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 125/331 (37%), Gaps = 7/331 (2%)
Query: 202 KLWERMS--VEVESGVKVAAF---ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
K W+RM VE G K+ A ++ G + E I + L G
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMN 194
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
++D+LCK R AR+V K P+ +N IHG K
Sbjct: 195 LLLDTLCKEKRVE-QARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGH 253
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
C +Y ++ C F+ K E+L M + Y + +
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
M S C+ D + N +I+ + G ++EA +V + + + + ++ ++I+
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG-I 495
D+A +L + N P V TY L+R +K + + MV+ +
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 496 GADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
D +TYT +++ LC + E A + ++I
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMI 464
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 19/305 (6%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
+++A + + + EA F G + + N+LL L + + Q +
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV--- 212
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSV 155
L+ K P+ ++ + +C R +A +MK G P V+SYTT+I YC
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
++ EM +G PNS+TY+ ++ + +++ E + ++ SG
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-------KRSGC 325
Query: 216 KV-AAFAN-LVDSLCREGFFNE---VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG 270
K + F N L+ +L R G E VFR+ E+P G Y MI C
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRV--EMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 271 AARIVYEMKKRGFVPSDV-LYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVL 328
A ++ EM+ DV Y ++ K GD + + D TY L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 329 VEALC 333
++ LC
Sbjct: 444 IQRLC 448
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/376 (17%), Positives = 141/376 (37%), Gaps = 40/376 (10%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
++ + G +A +FD + E G+E N+ + ++L+ + +E+ +E R ++ +L +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHI 220
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
+ + F + C+ E +E+ G + Y +I C+
Sbjct: 221 TPNAHT------FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
+ ++ EM+ G P+ + Y I+ L + + Y
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
L+ L +++A V ++ + + GV
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVS-------------------------------- 362
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
+ T N++I +C D+A+++L++M C PDV ++ ++ V E
Sbjct: 363 --INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEV 420
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
L ++ ++ L TY LI+ L + A+ ++ M+S I T +++E
Sbjct: 421 GKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
Query: 508 GLCDCDQIEEAKSFWH 523
+ + E A+ H
Sbjct: 481 EVKKKNMHESAERIEH 496
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 482 DAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAI 540
+A G++ + G+ ++ + ++++ LC ++E+A+ + S I N +
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIF 230
Query: 541 LKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ G C++ EA + E+ G P + SY +I C C + Y+++ EM+ NG
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 601 NPDCVTW 607
P+ +T+
Sbjct: 291 PPNSITY 297
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 182/476 (38%), Gaps = 18/476 (3%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI---- 184
+F +M ++G +V SYT LIN Y G + ++ D M + P+ LTY+ +I
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEE 242
RG L D EG + L+ M E G++ + + L+ + G +E +
Sbjct: 223 RGGL---DWEG----LLGLFAEMRHE---GIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ G + + Y ++++ K+ R ++ EM G +P YN ++ K G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
+TY VL+ D R++ M YNI
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 363 YLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK 422
+ M+E D+ T +I K G ++A K+LQ M
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 423 FCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPND 482
P ++T VI A +EA F+ M E G P + T+++L+ + +
Sbjct: 453 IV-PSSKAYTGVIEAFGQAALYEEALVAFN-TMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 483 AFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
+ + S +V GI + T+ +E + EEA + D+ D A+L
Sbjct: 511 SEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
+ +E E+ S + P+I Y +++ + + +++ EM N
Sbjct: 571 VYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 176/476 (36%), Gaps = 43/476 (9%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G VP L Y L++ F RR + +M + G P++ SY L+ Y G I +A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
VF +M +G PN+ TYSVL+ Q + R+L ++ + A +
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-----KSSNTDPDAATYN 391
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L++ G+F EV + ++ + + Y +I + K G + A +I+ M
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
VPS Y +I + T+ L+ + V ++
Sbjct: 452 DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES 511
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+L ++ G+ + R T N I
Sbjct: 512 EAILSRLV-DSGIPRNR----------------------------------DTFNAQIEA 536
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
+ + G +EA+K DM + C PD + V+S A VDE + F M + +
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEE-MKASDIL 594
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P ++ Y ++ K +R +D + M+S+ + +++G D D + +
Sbjct: 595 PSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEY 654
Query: 522 WHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
D + G Y A+L L G A L E G+ P +F N L+
Sbjct: 655 VLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 152/389 (39%), Gaps = 38/389 (9%)
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
++ L REG ++ + +E+P QG Y +I++ + GRY + ++ MK
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
PS + YN +I+ C RG + E L +F
Sbjct: 207 ISPSILTYNTVINA------CARG-------------------GLDWEGLLGLF------ 235
Query: 343 EVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+R EG+ + YN L A +M + D+ T + ++
Sbjct: 236 ----AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
F K +++ +L +M G PD+ S+ ++ + + EA +FH+ M G
Sbjct: 292 FGKLRRLEKVCDLLGEMASGG-SLPDITSYNVLLEAYAKSGSIKEAMGVFHQ-MQAAGCT 349
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P TY+ L+ + R +D ++ M S D+ TY I++E + +E +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
+HD++ + D Y I+ + G +A L + + + P+ +Y +I
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 582 LDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L EA M + G NP T+ L
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSL 498
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V + +IN + + G + +L++L D + + +P ++++ TVI+ E
Sbjct: 176 VFSYTALINAYGRNGRYETSLELL-DRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 452 HRVMPENGLRPCVVTYNAL-----IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
M G++P +VTYN L IRGL ++A V+ +M GI D TTY+ +V
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGL-----GDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
E ++E+ ++ + D Y +L+ +SG+ EA +++ +G +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
PN +Y++L+N + Q+ EMK + +PD T+ IL ++ G+
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 186/482 (38%), Gaps = 52/482 (10%)
Query: 128 RIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
R+F M+ + C PN YT +I+ G + +VFDEM GV + +Y+ LI
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA 185
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF-FNEVFRIAEELPC 245
+ G E +L +RM E S + + ++++ R G + + + E+
Sbjct: 186 YGR----NGRYETSLELLDRMKNEKIS-PSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE-MKKRGFVPSDVLYNYIIHGLTKDGDCM 304
+G + V Y ++ S C + A +V+ M G VP LT
Sbjct: 241 EGIQPDIVTYNTLL-SACAIRGLGDEAEMVFRTMNDGGIVPD----------LT------ 283
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
TY LVE + ++K ++L M + YN+ L
Sbjct: 284 -------------------TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
A M + C + T + ++N F ++G D+ ++ +M
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN-T 383
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
PD ++ +I + E LFH ++ EN + P + TY +I K DA
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGLHEDAR 442
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK---SFWHDVIWPSGIHDNFVYAAIL 541
+ M ++ I S YT ++E EEA + H+V I + ++L
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE---TFHSLL 499
Query: 542 KGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLN 601
R G E+ L LVDSG+ N ++N I EA + +M+K+ +
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 602 PD 603
PD
Sbjct: 560 PD 561
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 16/259 (6%)
Query: 53 EAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHR 112
EA F G VPD T + L+ + R + L+ + A G +P + +Y+
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM--ASGGSLPDITSYNV 322
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
L++ + +A +F M+ G PN +Y+ L+N + G D R++F EM S
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 173 VEPNSLTYSVLIRGVLQERDLEGG--RELMCKLWERMSVEVESGVKVAAFANLVDSLCRE 230
+P++ TY++LI E EGG +E++ + + +E ++ + ++ + +
Sbjct: 383 TDPDAATYNILI-----EVFGEGGYFKEVVTLFHDMVEENIEPDMET--YEGIIFACGKG 435
Query: 231 GFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS---- 286
G + +I + + + Y +I++ + Y A M + G PS
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 287 -DVLYNYIIHGLTKDGDCM 304
+LY++ GL K+ + +
Sbjct: 496 HSLLYSFARGGLVKESEAI 514
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 386 SQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
S R V T N +I + E++ + Q P+VVS+ +I+ D VD
Sbjct: 174 SNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVD 233
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
EA +++ ++ P VTY L +GL + R DA + M+S G ADST Y +
Sbjct: 234 EALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNL 293
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ G D ++A F+ ++ ++D V A ++ GN EA L+D
Sbjct: 294 IRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKF 353
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ + N+L+ K EA+ + EM N P+ ++
Sbjct: 354 RMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILS 394
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
+S +V++ N +IN C G+VDEAL+V + +L AP V++ + GL+ A R+
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS-----DGIGADS 499
+A L R M G YN LIRG L + A + + S DGI ++
Sbjct: 269 GDAASLL-REMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGI-VNA 326
Query: 500 TTYTIIVEGLCDCDQIEEAKSFWHDVIW---PSGIHDNFVYAAILKGLCRSGNFNEACHF 556
T E D + +E +S P+G +L+ + G +EA
Sbjct: 327 TFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTG-------NVLLEVFLKFGKKDEAWAL 379
Query: 557 LYELVDSGVSPNIFSYN-----ILINCACHLDLKSEAYQIVREM 595
E++D+ PNI S N I++N + SEA +++
Sbjct: 380 FNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKV 423
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 155/396 (39%), Gaps = 61/396 (15%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLA-EEVVYGQMIDSLCKVGRYHGAARIV 275
V ++ ++++ C EG +E + + A V Y + L + GR AA ++
Sbjct: 216 VVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLL 275
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM +G +YN +I G GD + + + +++ C V
Sbjct: 276 REMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE----------------FFDELKSKCTV 319
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+D ++ K G DK + + S+L+ + R T
Sbjct: 320 YDGIVNATFMEYWFEK-GNDKEAMESY------------------RSLLDKKFRMHPPTG 360
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLL-----DATRVDEAFDL 450
N ++ F K G DEA + +ML P+++S + G++ EA +
Sbjct: 361 NVLLEVFLKFGKKDEAWALFNEML-DNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINT 419
Query: 451 FHRVMPENGLRPCVVTY----NALIR----GLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
F +V + +P V+ Y N + R G+ +A ++ VS + AD+ ++
Sbjct: 420 FKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGML-----TEAERFFAEGVSRSLPADAPSH 474
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY---AAILKGLCRSGNFNEACHFLYE 559
+++ ++I++A ++ ++ V A + L ++G E+ L +
Sbjct: 475 RAMIDAYLKAERIDDAVKMLDRMV---DVNLRVVADFGARVFGELIKNGKLTESAEVLTK 531
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
+ + P+ Y++++ C D +A IV EM
Sbjct: 532 MGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEM 567
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Query: 7 LISLKPKPFIPFSLRFSTTIATPSSPSLQHSIATTLH----ALCDSNRFSEAHQCFSISL 62
L +L+ P P R P S S LH +L ++ A + S+
Sbjct: 113 LHALRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSV 172
Query: 63 ASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRR 122
S + P TCN ++A + R++ ++ +L + + VP++V+Y+++++ C
Sbjct: 173 FSNTRPTVFTCNAIIAAMYRAKRYSESISLFQ-YFFKQSNIVPNVVSYNQIINAHCDEGN 231
Query: 123 PCDAHRIFFD-MKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
+A ++ + N P+ V+Y L G G IGDA + EML G +S Y+
Sbjct: 232 VDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYN 291
Query: 182 VLIRGVLQERDLEGGRELMCKL 203
LIRG L D + E +L
Sbjct: 292 NLIRGYLDLGDFDKAVEFFDEL 313
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 164/412 (39%), Gaps = 8/412 (1%)
Query: 203 LWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL 262
+E MS++ S A + L L RE + + + LP + + +Y I L
Sbjct: 224 FYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGL 283
Query: 263 CKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG-YQXXXXXXXXXXXXC 321
RY A + M K P +V +I L K G + ++
Sbjct: 284 SASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWS 343
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV-DKTRIYNIYLRAXXXXXXXXXXXXXX 380
+ LV++ C ++A V++ + K+G+ T +YN + A
Sbjct: 344 QDVFGGLVKSFCDEGLKEEAL-VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLL 439
M + + T N +++ + + D +L++M +G P+V S+T +IS
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLG--LEPNVKSYTCLISAYG 460
Query: 440 DATRV-DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
++ D A D F R M + GL+P +Y ALI A+ + M +GI
Sbjct: 461 RTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPS 519
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
TYT +++ + W ++ Y +L G + G + EA +
Sbjct: 520 VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
E G+ P++ +YN+L+N ++ Q+++EM L PD +T+ +
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 175/432 (40%), Gaps = 48/432 (11%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRS-RTPLQTWALVRSLIVAK 100
+ L S R+ +A + + PD+ TC +L+ L ++ R+ + W + + ++
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM--SE 337
Query: 101 PGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
G S + L+ FC +A I +M+ +G N + Y TL++ Y I +
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
+F EM + G++P++ TY++L+ + RM
Sbjct: 398 VEGLFTEMRDKGLKPSAATYNILMDAYAR----------------RMQ------------ 429
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG-AARIVYEMK 279
++V++L RE E+L + ++ Y +I + + + AA MK
Sbjct: 430 PDIVETLLRE---------MEDLGLEPNVKS---YTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
K G PS Y +IH + G + Y TY +++A D
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 340 KAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
K E+ KLMLR E + TRI YN L + + V+T N +
Sbjct: 538 KLMEIWKLMLR-EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+N + + G + ++L++M PD ++++T+I + AF +H++M ++
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAALNL-KPDSITYSTMIYAFVRVRDFKRAF-FYHKMMVKS 654
Query: 459 GLRPCVVTYNAL 470
G P +Y L
Sbjct: 655 GQVPDPRSYEKL 666
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 173/437 (39%), Gaps = 24/437 (5%)
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
++ ++ +V Y I+G + DA +V++ M + V P+++T ++LI + +
Sbjct: 263 NLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRK-- 320
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVA--AFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
GR ++WE E GVK + F LV S C EG E I E+ +G
Sbjct: 321 ---AGRSAK-EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIR 376
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ +VY ++D+ K + EM+ +G PS YN ++ +
Sbjct: 377 SNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETL 436
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD-KTRIYNIYLRAXX 368
+Y L+ A + L ++K G+ + Y + A
Sbjct: 437 LREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS 496
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
M + + V T +V++ F ++G + +++ + ML K
Sbjct: 497 VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR- 555
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALI----RGLYKLKRPNDAF 484
+++ T++ G EA D+ + GL+P V+TYN L+ RG K P
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSE-FSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ--- 611
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSG-IHDNFVYA---AI 540
+ M + + DS TY+ ++ + A F+H ++ SG + D Y AI
Sbjct: 612 -LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA-FFYHKMMVKSGQVPDPRSYEKLRAI 669
Query: 541 LKGLCRSGNFNEACHFL 557
L+ ++ N + L
Sbjct: 670 LEDKAKTKNRKDKTAIL 686
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKR-PNDAFG 485
DV + ISGL + R D+A++++ M + + P VT LI L K R + +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYE-AMDKINVYPDNVTCAILITTLRKAGRSAKEVWE 330
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGL 544
++ M G+ + +V+ CD EEA + + GI N VY ++
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE-MEKKGIRSNTIVYNTLMDAY 389
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDC 604
+S + E E+ D G+ P+ +YNIL++ ++REM+ GL P+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 605 VTWRILHKIQGKVRKQT 621
++ L G+ +K +
Sbjct: 450 KSYTCLISAYGRTKKMS 466
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
+V+ LL R+ + L +P+ V YNA I GL +R +DA+ VY +M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWH--DVIWPSGIH-DNFVYAAILKGLCRSGN 549
+ D+ T I++ L + AK W + + G+ V+ ++K C G
Sbjct: 302 INVYPDNVTCAILITTLRKAGR--SAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGL 359
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
EA E+ G+ N YN L++ + E + EM+ GL P T+ I
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 610 L-----HKIQGKVRKQTLSEYQSLSI 630
L ++Q + + L E + L +
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGL 445
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 20 LRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLAR 79
LR PSS HS +HA S +A+ F G P T +L
Sbjct: 474 LRMKKVGLKPSS----HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 80 LLRSRTP---LQTWAL-VRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKN 135
RS ++ W L +R I + + Y+ L+D F +A + +
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKG------TRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 136 RGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLE 194
G P+V++Y L+N Y G ++ EM ++P+S+TYS +I ++ RD +
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFK 642
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 181/449 (40%), Gaps = 60/449 (13%)
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
+ G N+ TYSVL+ +++ + ++ +M E + + F NL+ R
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAIL----HQMKYET-CRFQESLFLNLMRHFSR 136
Query: 230 EGF-------FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV-YEMKKR 281
FN + IA P +++ +IDS G + + +++ Y
Sbjct: 137 SDLHDKVMEMFNLIQVIARVKPSLNAIS--TCLNLLIDS----GEVNLSRKLLLYAKHNL 190
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDVDK 340
G P+ ++N ++ K+GD + + TY L++ L +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
A E+ + M+ KEG+ D +T N +IN
Sbjct: 251 AVELFEDMISKEGIS----------------------------------PDPVTFNVMIN 276
Query: 401 GFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
GFC+ G V+ A K+L D + C P+V +++ +++G ++ EA F V + GL
Sbjct: 277 GFCRAGEVERAKKIL-DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV-KKTGL 334
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
+ V Y L+ + ++A + M + AD+ TY +I+ GL + EEA
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 521 FWHDVIWPS-GIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
W S G+H N Y IL LC +G +A FL + + G+ P+ ++N L+
Sbjct: 395 MLDQ--WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 579 ACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
C +++ + GL P +W
Sbjct: 453 LCESGYTEIGVRVLIGFLRIGLIPGPKSW 481
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N ++ CK G ++ A V+++M P+ ++++T++ L +R EA +LF +
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
+ + G+ P VT+N +I G + A + M +G + Y+ ++ G C +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 515 IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
I+EAK + +V D Y ++ CR+G +EA L E+ S + +YN+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++ EA Q++ + G++ + ++RI+
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
IT +T+++ EA+++ +DM+ + +PD V+F +I+G A V+ A +
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
M +NG P V Y+AL+ G K+ + +A + + G+ D+ YT ++ C
Sbjct: 293 -FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+ +EA ++ D Y IL+GL G EA L + GV N SY
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
I++N C +A + + M + G+ P TW L
Sbjct: 412 RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 8/263 (3%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLAS-GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLI 97
+T + L +R EA + F ++ G PD T NV++ R+ + ++
Sbjct: 236 STLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD--F 293
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K G P++ NY LM+ FC + +A + F ++K G + V YTTL+N +C G
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+A K+ EM S ++LTY+V++RG+ E E +++ + W V + G
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ-WGSEGVHLNKG--- 409
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
++ ++++LC G + + + +G + +++ LC+ G R++
Sbjct: 410 -SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIG 468
Query: 278 MKKRGFVPSDVLYNYIIHGLTKD 300
+ G +P + ++ + K+
Sbjct: 469 FLRIGLIPGPKSWGAVVESICKE 491
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLAS-GSVPDHRTCNVLLARLLRSRTPLQTW 90
PSL ++I+T L+ L DS + + + + + G P+ N+L+ ++ +
Sbjct: 158 PSL-NAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAF 216
Query: 91 ALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR-GHCPNVVSYTTLI 149
+V + + + P+ + Y LMD R +A +F DM ++ G P+ V++ +I
Sbjct: 217 LVVEEMKRSGISY-PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 150 NGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV 209
NG+C G + A+K+ D M ++G PN YS L+ G
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG----------------------- 312
Query: 210 EVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYH 269
C+ G E + +E+ G + V Y +++ C+ G
Sbjct: 313 -----------------FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD 355
Query: 270 GAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLV 329
A +++ EMK + YN I+ GL+ +G Q +Y++++
Sbjct: 356 EAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL 415
Query: 330 EALCHVFDVDKAREVLKLM 348
ALC +++KA + L +M
Sbjct: 416 NALCCNGELEKAVKFLSVM 434
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
CR ++ F ++ D+ +++ + + P + + +T ++ L+D+ V+ +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG-ADSTTYTIIV 506
L GL+P +N L++ K N AF V M GI +S TY+ ++
Sbjct: 180 RKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ L + +EA + D+I GI D + ++ G CR+G A L + +G
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+PN+++Y+ L+N C + EA Q E+KK GL D V + L
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 12/297 (4%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQG-SLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
F LV C+ G N F + EE+ G S + Y ++D L R A + +M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 279 -KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
K G P V +N +I+G + G+ R + + Y L+ C V
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 338 VDKAR----EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+ +A+ EV K L+ + V T + N + R M S+CRAD +
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR----NGETDEAMKLLGEMKASRCRADTL 374
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N ++ G G +EAL++L D + + S+ +++ L +++A F
Sbjct: 375 TYNVILRGLSSEGRSEEALQML-DQWGSEGVHLNKGSYRIILNALCCNGELEKAVK-FLS 432
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
VM E G+ P T+N L+ L + V + G+ ++ +VE +C
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
MLE DV+T N ++ + G +D ++ +M F +PD ++ ++ L
Sbjct: 244 QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF-SPDSYTYNILLHILGKG 302
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
+ A + M E G+ P V+ Y LI GL + MV G D
Sbjct: 303 NKPLAALTTLNH-MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT+++ G ++++AK + ++ + + F Y ++++GLC +G F EAC L E+
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG----LNPDCVTWR 608
G +PN Y+ L++ SEA +++REM K G L P + +R
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYR 472
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 34 LQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALV 93
+HS L++L ++ + L G PD T N+LL R + L
Sbjct: 218 FKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLF 277
Query: 94 RSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
+ A+ GF P Y+ L+ +P A MK G P+V+ YTTLI+G
Sbjct: 278 DEM--ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
G + + DEM+++G P+ + Y+V+I G + +L+ +E ++ M+V+ +
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE----MFREMTVKGQL 391
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
V + +++ LC G F E + +E+ +G VVY ++ L K G+ A +
Sbjct: 392 P-NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 274 IVYEMKKRG 282
++ EM K+G
Sbjct: 451 VIREMVKKG 459
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
+ N ++N V + ML F +PDV+++ ++ ++D FD
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGF-SPDVLTYNILLWTNYRLGKMDR-FDRLFD 278
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
M +G P TYN L+ L K +P A + M GI YT +++GL
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG 338
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+E K F +++ D Y ++ G SG ++A E+ G PN+F+YN
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+I C EA +++EM+ G NP+ V + L
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 116/321 (36%), Gaps = 82/321 (25%)
Query: 130 FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ 189
F K + P SY ++N V V+ +MLE G P+ LTY++L
Sbjct: 207 FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL------ 260
Query: 190 ERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
LW + K+ F L D + R+GF + +
Sbjct: 261 -------------LWTNYRLG-----KMDRFDRLFDEMARDGFSPDSY------------ 290
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD---CMRG 306
Y ++ L K + A + MK+ G PS + Y +I GL++ G+ C
Sbjct: 291 ----TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYF 346
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
C Y V++ ++DKA+E+ + M K +
Sbjct: 347 LDEMVKAGCRPDVVC---YTVMITGYVVSGELDKAKEMFREMTVKGQL------------ 391
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
+V T N++I G C G EA +L++M + C P
Sbjct: 392 -----------------------PNVFTYNSMIRGLCMAGEFREACWLLKEM-ESRGCNP 427
Query: 427 DVVSFTTVISGLLDATRVDEA 447
+ V ++T++S L A ++ EA
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEA 448
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 46/263 (17%)
Query: 385 ESQC-RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
E +C R V + + ++ F + G +++ +M+ F +F +I +A
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGF-PTTARTFNLLICSCGEAGL 199
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+A F + N RP +YNA++ L +K+ VY M+ DG D TY
Sbjct: 200 AKQAVVQFMKSKTFN-YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYN 258
Query: 504 IIVEG---LCDCDQIEE-----------AKSFWHDVIW---------------------- 527
I++ L D+ + S+ ++++
Sbjct: 259 ILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV 318
Query: 528 ---PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDL 584
PS +H Y ++ GL R+GN +FL E+V +G P++ Y ++I
Sbjct: 319 GIDPSVLH----YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 585 KSEAYQIVREMKKNGLNPDCVTW 607
+A ++ REM G P+ T+
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTY 397
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY VL+ C V ++ +A + M+ +N+ L M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+V + +I FCK S++ A++ DM+ PD +T +I+G +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL-QPDAAVYTCLITGFGTQKK 417
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+D ++L + M E G P TYNALI+ + K P +Y+ M+ + I T+
Sbjct: 418 LDTVYELL-KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 476
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+I++ E ++ W ++I D+ Y +++GL G EAC +L E++D
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 564 GVSPNIFSYN 573
G+ + YN
Sbjct: 537 GMKTPLIDYN 546
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 23/248 (9%)
Query: 71 RTCNVLLARLLRSRTP--------LQTWALVRSLIVAKP--------GFVPSLVNYHRLM 114
+ VL +L TP L W VR+LI A G P +V ++ ++
Sbjct: 280 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 115 DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE 174
+ + DA ++F MK++G CPNV SYT +I +C + A + FD+M++SG++
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 175 PNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFN 234
P++ Y+ LI G ++ L+ EL+ ++ E+ + L+ + +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-----GHPPDGKTYNALIKLMANQKMPE 454
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY-EMKKRGFVPSDVLYNYI 293
RI ++ Q + + MI V R + R V+ EM K+G P D Y +
Sbjct: 455 HGTRIYNKM-IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 294 IHGLTKDG 301
I GL +G
Sbjct: 514 IRGLISEG 521
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 6/290 (2%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY ++ L + VL+ M K G+ + I ++A M
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELM 254
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ + + V T+N +++ + EA +VL D L +F P+++++T +++G
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERF-TPNMMTYTVLLNGWCRVRN 312
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ EA +++ M ++GL+P +V +N ++ GL + + +DA ++ M S G + +YT
Sbjct: 313 LIEAARIWND-MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++ C +E A ++ D++ SG+ D VY ++ G + L E+ +
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMV-DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
G P+ +YN LI + + +I +M +N + P T+ ++ K
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 37/259 (14%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L+ + +++T ++NG+C+ ++ EA ++ DM+ PD+V+ ++ GLL + +
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMK 347
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+A LFH VM G P V +Y +IR K A + MV G+ D+ YT
Sbjct: 348 KSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR----------------- 546
++ G +++ ++ D Y A++K +
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 547 ------------------SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+ N+ E++ G+ P+ SY +LI EA
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 589 YQIVREMKKNGLNPDCVTW 607
+ + EM G+ + +
Sbjct: 527 CRYLEEMLDKGMKTPLIDY 545
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G PD +T N L+ + + P + +I + PS+ ++ +M + V R
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI--QNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
++ +M +G CP+ SYT LI G S G +A + +EML+ G++ + Y+
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY VL+ C V ++ +A + M+ +N+ L M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+V + +I FCK S++ A++ DM+ PD +T +I+G +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL-QPDAAVYTCLITGFGTQKK 418
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+D ++L + M E G P TYNALI+ + K P +Y+ M+ + I T+
Sbjct: 419 LDTVYELL-KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 477
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+I++ E ++ W ++I D+ Y +++GL G EAC +L E++D
Sbjct: 478 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
Query: 564 GVSPNIFSYN 573
G+ + YN
Sbjct: 538 GMKTPLIDYN 547
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 23/248 (9%)
Query: 71 RTCNVLLARLLRSRTP--------LQTWALVRSLIVAKP--------GFVPSLVNYHRLM 114
+ VL +L TP L W VR+LI A G P +V ++ ++
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 115 DQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE 174
+ + DA ++F MK++G CPNV SYT +I +C + A + FD+M++SG++
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 175 PNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFN 234
P++ Y+ LI G ++ L+ EL+ ++ E+ + L+ + +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-----GHPPDGKTYNALIKLMANQKMPE 455
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY-EMKKRGFVPSDVLYNYI 293
RI ++ Q + + MI V R + R V+ EM K+G P D Y +
Sbjct: 456 HGTRIYNKM-IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 294 IHGLTKDG 301
I GL +G
Sbjct: 515 IRGLISEG 522
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 6/290 (2%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY ++ L + VL+ M K G+ + I ++A M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ + + V T+N +++ + EA +VL D L +F P+++++T +++G
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERF-TPNMMTYTVLLNGWCRVRN 313
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ EA +++ M ++GL+P +V +N ++ GL + + +DA ++ M S G + +YT
Sbjct: 314 LIEAARIWND-MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++ C +E A ++ D++ SG+ D VY ++ G + L E+ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMV-DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
G P+ +YN LI + + +I +M +N + P T+ ++ K
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 37/259 (14%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
L+ + +++T ++NG+C+ ++ EA ++ DM+ PD+V+ ++ GLL + +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMK 348
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+A LFH VM G P V +Y +IR K A + MV G+ D+ YT
Sbjct: 349 KSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR----------------- 546
++ G +++ ++ D Y A++K +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 547 ------------------SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEA 588
+ N+ E++ G+ P+ SY +LI EA
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 589 YQIVREMKKNGLNPDCVTW 607
+ + EM G+ + +
Sbjct: 528 CRYLEEMLDKGMKTPLIDY 546
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G PD +T N L+ + + P + +I + PS+ ++ +M + V R
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI--QNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
++ +M +G CP+ SYT LI G S G +A + +EML+ G++ + Y+
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 213/536 (39%), Gaps = 58/536 (10%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
TCN +L ++ R + W L R + ++V++ ++ C R DA +F
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREM-------PKNVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
+M R NVVS+ TL+ G G + A++VFD M V ++++ +I+G ++
Sbjct: 163 EMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIEND 214
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+E + L + E+ V + ++V CR G E +R+ E+P +
Sbjct: 215 GMEEAKLLFGDMSEK---------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI--- 262
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKK--RGFVPSDVLYNYIIHGLTKDGDCMR--GY 307
V + MI Y A + EMKK P+ + + G R G
Sbjct: 263 -VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 308 QXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTR---IYNIYL 364
Q DH + L ++L H++ + +L E D I N YL
Sbjct: 322 QLHAQVISNGWETVDHDGR-LAKSLVHMYASSGLIASAQSLL-NESFDLQSCNIIINRYL 379
Query: 365 RAXXXXXXXXXXXXXXXSMLES-QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
+ ++ E + D ++ ++I+G+ + G V A + Q K
Sbjct: 380 K--------NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ-----KL 426
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
D V++T +ISGL+ EA L M GL+P TY+ L+ +
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSD-MVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 484 FGVYSSMVSDGI--GADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAIL 541
++ + D +V C IE+A + ++ D + +++
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV----QKDTVSWNSMI 541
Query: 542 KGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
GL G ++A + E++DSG PN ++ +++ H L + ++ + MK+
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 23/216 (10%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
+ E +++T N ++ G+ K ++EA + ++M +VVS+T +++ L D
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTALCDDG 152
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
R ++A +LF MPE VV++N L+ GL + A V+ +M S D ++
Sbjct: 153 RSEDAVELFDE-MPERN----VVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSW 203
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+++G + D +EEAK + D+ + + +++ G CR G+ EA E+ +
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
NI S+ +I+ +L EA + EMKK+
Sbjct: 260 R----NIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ + N +IN + K G ++ A + + + D VS+T++I G L+A V AF L
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVK----SLHDKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F ++ ++G VT+ +I GL + + +A + S MV G+ ++TY++++
Sbjct: 423 FQKLHDKDG-----VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 511 DCDQIEEAKSFWHDVIWPSGI---HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
+++ K H VI + D + +++ + G +A YE+ V
Sbjct: 478 ATSNLDQGKHI-HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA----YEIFAKMVQK 532
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ S+N +I H L +A + +EM +G P+ VT
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 428 VVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVY 487
VV +T+++S +DEA LF VMPE +VT NA++ G K +R N+A+ ++
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFE-VMPERN----IVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 488 SSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRS 547
M + + ++T+++ LCD + E+A + ++ P + + ++ GL R+
Sbjct: 132 REMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEM--PE--RNVVSWNTLVTGLIRN 182
Query: 548 GNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
G+ +A ++ D+ S ++ S+N +I D EA + +M + + VTW
Sbjct: 183 GDMEKA----KQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTW 234
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ L + F+EA S + G P + T +VLL+ + + L + +I
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA-GATSNLDQGKHIHCVIAKTT 496
Query: 102 G-FVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
+ P L+ + L+ + DA+ IF M + + VS+ ++I G G
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADK 552
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A +F EML+SG +PNS+T+ ++ + G EL + E S++ + +
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ----PGIDHY 608
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
+++D L R G E LP + VYG ++ LC
Sbjct: 609 ISMIDLLGRAGKLKEAEEFISALPFT---PDHTVYGALL-GLC 647
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATR 443
+ + + D T N + G+C+ +A+K+L++M+ P+ ++ I A
Sbjct: 260 MRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGH-KPENFTYCAAIDTFCQAGM 318
Query: 444 VDEAFDLFHRVMPENGL--RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
VDEA DLF ++ + P T+ +I L K + + F + M+S G D +T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y ++EG+C ++++EA F ++ D Y L+ LC + +EA +V
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+S +P++ +YN+LI+ +D A+ EM K D T+
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 136/358 (37%), Gaps = 46/358 (12%)
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEM------KKRGFVPSDVLYNYIIHGLTKDGDCM 304
E + Y +MID L + RIV +M + V DVL + + +
Sbjct: 158 EPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHV 217
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ + + + +L++ALC V + +L+ M + D +N+
Sbjct: 218 QKFAKRKRIRVKTQPEIN-AFNMLLDALCKCGLVKEGEALLRRMRHRVKPD-ANTFNVLF 275
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM------ 418
M+E+ + + T I+ FC+ G VDEA + M
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSA 335
Query: 419 ---------------------------LMGKF----CAPDVVSFTTVISGLLDATRVDEA 447
L+G+ C PDV ++ VI G+ A +VDEA
Sbjct: 336 VSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
+ M G P +VTYN +R L + ++ ++A +Y MV TY +++
Sbjct: 396 YKFLDE-MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ D + A + W ++ + D Y A++ GL EAC L E+V+ G+
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 6/227 (2%)
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
+ + ++ N +++ CK G V E +L+ M PD +F + G +
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPKK 286
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS---TTYT 503
A L M E G +P TY A I + ++A ++ M++ G + T+
Sbjct: 287 AMKLLEE-MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
+++ L D+ EE +I + D Y +++G+C + +EA FL E+ +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G P+I +YN + C EA ++ M ++ P T+ +L
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
P++ +F ++ L V E L R+ + ++P T+N L G +++ P A
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM--RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI---HDNFVYAAILK 542
+ M+ G ++ TY ++ C ++EA + +I +A ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
L ++ E + ++ +G P++ +Y +I C + EAY+ + EM G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 603 DCVTWRILHKIQGKVRK 619
D VT+ ++ + RK
Sbjct: 410 DIVTYNCFLRVLCENRK 426
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 105/242 (43%), Gaps = 10/242 (4%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSV---PDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+ C + EA F + GS P +T +++ L ++ + + L+ +I
Sbjct: 310 IDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMI- 368
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
G +P + Y +++ C+ + +A++ +M N+G+ P++V+Y + C
Sbjct: 369 -STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
+A K++ M+ES P+ TY++LI + D +G ++ +R V+ V
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQ-----DVE 482
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+ +++ L E + EE+ +G V+ + L +VG ++ M
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Query: 279 KK 280
KK
Sbjct: 543 KK 544
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 15/232 (6%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
P+ N+LL L + + AL+R + + P ++ L +C R P A
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM---RHRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG---VEPNSLTYSVLI 184
++ +M GH P +Y I+ +C G + +A +FD M+ G P + T++++I
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFRIAEE 242
+ + E EL+ ++ + +G V+ + ++++ +C +E ++ +E
Sbjct: 349 VALAKNDKAEECFELIGRM-------ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
+ +G + V Y + LC+ + A ++ M + PS YN +I
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 45/387 (11%)
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
A+P + Y+ +M + + A + M+ RG P+++S+ TLIN GG+
Sbjct: 217 AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGL 276
Query: 159 GD--ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A ++ D + SG+ P+++TY+ L+ ++ +L+G K++E M
Sbjct: 277 TPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA----VKVFEDMEAH-RCQPD 331
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ + ++ R G E R+ EL +G + V Y ++ + + +
Sbjct: 332 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHV 335
+M+K GF ++ YN IIH K G Q D TY VL+++L
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK- 450
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
++ E LM ML+ + + T
Sbjct: 451 --ANRTVEAAALM--------------------------------SEMLDVGIKPTLQTY 476
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+ +I G+ K G +EA ML PD ++++ ++ LL +A+ L+ R M
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSG-TKPDNLAYSVMLDVLLRGNETRKAWGLY-RDM 534
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPND 482
+G P Y +I GL K R +D
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDD 561
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 115/572 (20%), Positives = 222/572 (38%), Gaps = 25/572 (4%)
Query: 48 SNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSL 107
S +FS+A + G VPD + N L+ L+S A+ +V G P
Sbjct: 238 SGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDA 297
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+ Y+ L+ A ++F DM+ P++ +Y +I+ Y G +A ++F E
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSL 227
+ G P+++TY+ L+ +ER+ E +E+ ++ ++M G + ++
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM-QKMGF----GKDEMTYNTIIHMY 412
Query: 228 CREGFFNEVFRIAEELP-CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
++G + ++ +++ G + + Y +IDSL K R AA ++ EM G P+
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
Y+ +I G K G + Y V+++ L + KA + +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV-INGFCKT 405
M+ +Y + + M E C + + +++V + G C
Sbjct: 533 DMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM-EELCGMNPLEISSVLVKGEC-- 589
Query: 406 GSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVV 465
D A + L+ + + + + +++ + R EAF+L + E+ +
Sbjct: 590 --FDLAARQLKVAITNGYELEN-DTLLSILGSYSSSGRHSEAFELLE-FLKEHASGSKRL 645
Query: 466 TYNALIRGLYKLKRPNDAFGVY--SSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH 523
ALI K+ + A Y V ST Y ++ + EA +
Sbjct: 646 ITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFS 705
Query: 524 DVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS-----GVSPNIFSYNILINC 578
D+ V +++ C+ G F E H + ++ SP Y +I
Sbjct: 706 DLRLSGCEASESVCKSMVVVYCKLG-FPETAHQVVNQAETKGFHFACSP---MYTDIIEA 761
Query: 579 ACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
L +A +V ++++G PD TW L
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSL 793
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 116/594 (19%), Positives = 231/594 (38%), Gaps = 60/594 (10%)
Query: 32 PSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWA 91
P+LQ + + + + + EA FS L SG+ PD+ +V+L LLR + W
Sbjct: 471 PTLQ-TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING 151
L R DM + GH P+ Y +I G
Sbjct: 530 LYR-------------------------------------DMISDGHTPSYTLYELMILG 552
Query: 152 YCSVGGIGDARKVFDEMLE-SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
D +K +M E G+ P ++ SVL++G + DL R+L + +E
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKG--ECFDL-AARQLKVAITNGYELE 608
Query: 211 VESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG 270
++ +++ S G +E F + E L S ++ ++ +I CKV
Sbjct: 609 NDT------LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSA 662
Query: 271 AARIVYEMK-KRGF-VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVL 328
A + G+ S +Y ++H + Q + K +
Sbjct: 663 ALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSM 722
Query: 329 VEALCHVFDVDKAREVLKLMLRKE-GVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
V C + + A +V+ K + +Y + A ++ +S
Sbjct: 723 VVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSG 782
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
D+ T N++++ + + G + A + M M +P V S ++ L R++E
Sbjct: 783 RTPDLKTWNSLMSAYAQCGCYERARAIFNTM-MRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV---YSSMVSDGIGADSTTYTI 504
+ + + + G + ++ ++++ L R + F V YSSM + G Y +
Sbjct: 842 YVVVEE-LQDMGFK---ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
++E LC ++ +A+ ++ + + ++ ++LK ++ + + ++G
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
+ P+ +YN LI C E Y ++++M+ GL+P T++ L GK +
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVI-----SGLLDATRVDEAFDL 450
N ++ + ++G +A + L D + + C PD++SF T+I SG L E D+
Sbjct: 229 NAMMGVYSRSGKFSKA-QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+GLRP +TYN L+ + + A V+ M + D TY ++
Sbjct: 288 VR----NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C EA+ + ++ D Y ++L R N + ++ G +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 571 SYNILINC---ACHLDLKSEAYQIVREMKK-NGLNPDCVTWRILHKIQGKVRK 619
+YN +I+ LDL A Q+ ++MK +G NPD +T+ +L GK +
Sbjct: 404 TYNTIIHMYGKQGQLDL---ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 148/346 (42%), Gaps = 10/346 (2%)
Query: 22 FSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL 81
F+T + SP+++ SI LHALC R E + G + ++L
Sbjct: 810 FNTMMRDGPSPTVE-SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFA 868
Query: 82 RSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPN 141
R+ + + S+ A G++P++ Y +++ C +R DA + +M+
Sbjct: 869 RAGNIFEVKKIYSSMKAA--GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
+ + +++ Y ++ +V+ + E+G+EP+ TY+ LI ++R E G LM
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
++ + ++ K+ + +L+ + ++ + ++ EEL +G + Y M+
Sbjct: 987 QM-RNLGLD----PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
G A +++ MK G P+ + ++ + G+ +
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT-RIYNIYLRA 366
Y +++A D + E L L ++KEG++ RI+ ++RA
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERL-LEMKKEGLEPDHRIWTCFVRA 1146
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/389 (18%), Positives = 149/389 (38%), Gaps = 4/389 (1%)
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ +++++ ++ + + + L G + + ++ + + G Y A I M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ G P+ N ++H L DG Y + ++++A ++
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+ +++ M + R+Y + + M E+ + ++ N+++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+ + ++V Q + PD ++ T+I R +E + L + M G
Sbjct: 935 KMYTAIEDYKKTVQVYQ-RIKETGLEPDETTYNTLIIMYCRDRRPEEGY-LLMQQMRNLG 992
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
L P + TY +LI K K A ++ ++S G+ D + Y +++ D +A+
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 520 SFWHDVIWPSGIHDNFVYAAILK-GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINC 578
++ +GI +L SGN EA L L D+ V Y+ +I+
Sbjct: 1053 KLLQ-MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 579 ACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ + + EMKK GL PD W
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 204/524 (38%), Gaps = 45/524 (8%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
P T ++L L + + P+ L P + + Y ++D R +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 128 RIFFDMKNRG-HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+ MK C + V + ++I + G + DA +F + E SL++ L++
Sbjct: 67 YVIERMKEDSCECKDSV-FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+++E +LE C ++ + E ++ A L+ LC+ + ++ +E+ Q
Sbjct: 126 MVKESELEAA----CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G + Y ++ C G+ A ++Y M R +++ G G
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR---------------ISQKGS---G 223
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
Y++L++ALC +VD A E+L +LRK R Y+ ++ A
Sbjct: 224 EDIV-------------VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH-HIEA 269
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNT---VINGFCKTGSVDEALKVLQDMLMGKF 423
+ E+ R + L++ + + G + E +VL M F
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
P + + L A ++ EA + ++ M + P V YN LI+GL + +A
Sbjct: 330 -EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 484 FGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
G M A+ TY +V+GLC Q EA +++ S Y ++K
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN--CACHLDL 584
GLC EA +L E+V + P + L C C +D+
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCAIDV 492
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 21/261 (8%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTP-------LQTWALVR 94
L ALCD+ +A + L G R + + A S + L T L+R
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
G +P L +Y + + + + M+++G P Y + C
Sbjct: 293 -------GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 155 VGGIGDARKVFD-EMLESGVEPNSLTYSVLIRGVLQE-RDLEGGRELMCKLWERMSVEVE 212
G + +A V + EM++ P Y+VLI+G+ + + +E L ++MS +V
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL-----KKMSKQVS 400
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
+ LVD LCR+G F E ++ EE+ + Y MI LC + R + A
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Query: 273 RIVYEMKKRGFVPSDVLYNYI 293
+ EM + VP ++ +
Sbjct: 461 MWLEEMVSQDMVPESSVWKAL 481
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 52/334 (15%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC NR A Q F G PD +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDS----------------------------- 189
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDA----HRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
Y LM FC+ + +A + +F+ + +G ++V Y L++ C G
Sbjct: 190 --------YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ--ERDLEGGRELMCKLWERMSVEVESGV 215
+ DA ++ ++L G++ Y + G + +E + L+ + R ++
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC---- 297
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ +++ + L EG E + + +G +YG + +LC+ G+ A ++
Sbjct: 298 -LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 276 -YEMKKRGFVPSDVLYNYIIHGLTKDGDCMR--GYQXXXXXXXXXXXXCDHTYKVLVEAL 332
EM + +P+ +YN +I GL DG M GY + TY+ LV+ L
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN-EETYQTLVDGL 415
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
C +A +V++ ML K Y++ ++
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 204/524 (38%), Gaps = 45/524 (8%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
P T ++L L + + P+ L P + + Y ++D R +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMK 66
Query: 128 RIFFDMKNRG-HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+ MK C + V + ++I + G + DA +F + E SL++ L++
Sbjct: 67 YVIERMKEDSCECKDSV-FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQE 125
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+++E +LE C ++ + E ++ A L+ LC+ + ++ +E+ Q
Sbjct: 126 MVKESELEAA----CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G + Y ++ C G+ A ++Y M R +++ G G
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR---------------ISQKGS---G 223
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
Y++L++ALC +VD A E+L +LRK R Y+ ++ A
Sbjct: 224 EDIV-------------VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH-HIEA 269
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNT---VINGFCKTGSVDEALKVLQDMLMGKF 423
+ E+ R + L++ + + G + E +VL M F
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
P + + L A ++ EA + ++ M + P V YN LI+GL + +A
Sbjct: 330 -EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 484 FGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILK 542
G M A+ TY +V+GLC Q EA +++ S Y ++K
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN--CACHLDL 584
GLC EA +L E+V + P + L C C +D+
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCAIDV 492
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 21/261 (8%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTP-------LQTWALVR 94
L ALCD+ +A + L G R + + A S + L T L+R
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
G +P L +Y + + + + M+++G P Y + C
Sbjct: 293 -------GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 155 VGGIGDARKVFD-EMLESGVEPNSLTYSVLIRGVLQE-RDLEGGRELMCKLWERMSVEVE 212
G + +A V + EM++ P Y+VLI+G+ + + +E L ++MS +V
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL-----KKMSKQVS 400
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
+ LVD LCR+G F E ++ EE+ + Y MI LC + R + A
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Query: 273 RIVYEMKKRGFVPSDVLYNYI 293
+ EM + VP ++ +
Sbjct: 461 MWLEEMVSQDMVPESSVWKAL 481
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 52/334 (15%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ LC NR A Q F G PD +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDS----------------------------- 189
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDA----HRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
Y LM FC+ + +A + +F+ + +G ++V Y L++ C G
Sbjct: 190 --------YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ--ERDLEGGRELMCKLWERMSVEVESGV 215
+ DA ++ ++L G++ Y + G + +E + L+ + R ++
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC---- 297
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ +++ + L EG E + + +G +YG + +LC+ G+ A ++
Sbjct: 298 -LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 276 -YEMKKRGFVPSDVLYNYIIHGLTKDGDCMR--GYQXXXXXXXXXXXXCDHTYKVLVEAL 332
EM + +P+ +YN +I GL DG M GY + TY+ LV+ L
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN-EETYQTLVDGL 415
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
C +A +V++ ML K Y++ ++
Sbjct: 416 CRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 207/484 (42%), Gaps = 50/484 (10%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERD---LEGG 196
P+VV + +I G+ V G+ +++ ML+ GV P+S T+ L+ G+ +RD L G
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL--KRDGGALACG 154
Query: 197 RELMC---KLWERMSVEVESG-VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEE 252
++L C K ++ V++ VK+ + L+D G F+ R E++
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMD--MARGVFDR--RCKEDV--------- 201
Query: 253 VVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD---CMRGYQX 309
+ MI ++ Y + ++ EM++ P+ V ++ +K D C R ++
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
++ LV A ++D A + + M ++ + T I Y+
Sbjct: 262 VSECKTEPSLRLENA---LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE---- 314
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
+ + D I+ +I+G+ + G +E+L++ ++M PD
Sbjct: 315 ----RGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEF 369
Query: 430 SFTTVISGL--LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVY 487
+ +V++ L + + E + + +N ++ VV NALI +K A V+
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTY---IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 488 SSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRS 547
M D T+T +V GL + Q +EA + + S D+ Y +L S
Sbjct: 427 HDMDQ----RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS 482
Query: 548 GNFNEACHFLYEL-VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
G ++A F ++ D + P++ Y +++ L EAY+I+R+M +NP+ +
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIV 539
Query: 607 WRIL 610
W L
Sbjct: 540 WGAL 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
V A+ LF ++ PE P VV +N +I+G K+ + +Y +M+ +G+ DS T+
Sbjct: 84 VSYAYKLFVKI-PE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFP 138
Query: 504 IIVEGLC-DCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELV 561
++ GL D + K H + G+ N +V A++K G + A +
Sbjct: 139 FLLNGLKRDGGALACGKKL-HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA----RGVF 193
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
D ++FS+N++I+ + E+ +++ EM++N ++P VT ++ KV+ +
Sbjct: 194 DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKD 253
Query: 622 L 622
L
Sbjct: 254 L 254
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 44/430 (10%)
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
+R L+E D++ EL+ ++ R+ + E+ AF V + ++G+ V
Sbjct: 114 LRNKLEECDVKPSNELVVEILSRVRNDWET-----AFTFFVWAGKQQGYVRSVRE----- 163
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI---------I 294
Y MI L K+ ++ A ++ EM+K F PS V + +
Sbjct: 164 -----------YHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAV 210
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
H + K + Y+ ++ L+ ALC +V A ++ K
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGI------DDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF 264
Query: 355 DKTRIYNIYLRAX-XXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
D + +NI L M + DV++ +++I+ + K GS+++ LK
Sbjct: 265 D-AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
+ D + + PD + V+ L A+ V EA +L + E G+ P VVTYN+LI+
Sbjct: 324 LF-DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKP 382
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
L K ++ +A V+ M+ G+ TY + L +++ E + + +
Sbjct: 383 LCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVE- 441
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
Y +++ LCR +F+ E+ + V P++ SY ++I+ EAY +
Sbjct: 442 --TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYK 499
Query: 594 EMKKNGLNPD 603
EMK G+ P+
Sbjct: 500 EMKDKGMRPN 509
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 109 NYHRLMDQFC-VFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
+++ +++ +C V P +A R++ +M N G +VVSY+++I+ Y G + K+FD
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 168 MLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVD 225
M + +EP+ Y+ ++ + + + R LM ++E E G++ V + +L+
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLM------KTMEEEKGIEPNVVTYNSLIK 381
Query: 226 SLCR----------------EGFF----------------NEVFRIAEELPCQGSLAEEV 253
LC+ +G F EVF + ++ G
Sbjct: 382 PLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVE 441
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
Y +I LC+ + + EMK++ P Y +IHGL +G Y
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 495
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 68 PDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAH 127
PD + N ++ L ++ + L++++ K G P++V Y+ L+ C R+ +A
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEK-GIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD---EMLESGVEPNSLTYSVLI 184
++F +M +G P + +Y + + + G+ +VF+ +M + G EP TY +LI
Sbjct: 394 QVFDEMLEKGLFPTIRTY----HAFMRILRTGE--EVFELLAKMRKMGCEPTVETYIMLI 447
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
R + + RD + + LW+ M E G ++++ ++ L G E + +E+
Sbjct: 448 RKLCRWRDFDN----VLLLWDEMK-EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
+G E V MI S G+ + RI
Sbjct: 503 DKGMRPNENV-EDMIQSWFS-GKQYAEQRIT 531
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
+ + LC + + EA Q F L G P RT + + R+LR T + + L+ +
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-RILR--TGEEVFELLAKM--R 432
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G P++ Y L+ + C +R + ++ +MK + P++ SY +I+G G I
Sbjct: 433 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 492
Query: 160 DARKVFDEMLESGVEPN 176
+A + EM + G+ PN
Sbjct: 493 EAYGYYKEMKDKGMRPN 509
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLM--GKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
T++ G+ K G V + ++L+ M + PD V++TTV+S ++A +D A +
Sbjct: 419 TLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE- 477
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGLCDCD 513
M G+ +TYN L++G K + + A + M D GI D +Y II++G D
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 514 QIEEAKSFWHDV----IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV-DSGVSPN 568
A +F++++ I P+ I Y ++K SG A E++ D V +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKIS----YTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVD 593
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRK 619
+ ++N+L+ C L L +A ++V MK+NG P+ T+ L + RK
Sbjct: 594 LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
D +T TV++ F G +D A +VL +M MG + +++ ++ G ++D A D
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMG--VPANRITYNVLLKGYCKQLQIDRAED 508
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
L + + G+ P VV+YN +I G + A ++ M + GI +YT +++
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 510 CDCDQIEEAKSFWHDVIW-PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
Q + A + +++ P D + +++G CR G +A + + ++G PN
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKK 597
+ +Y L N +A + +E+K+
Sbjct: 629 VATYGSLANGVSQARKPGDALLLWKEIKE 657
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 103 FVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMK---NRGHCPNVVSYTTLINGYCSVGGIG 159
F P Y LM + R D R+ M+ +R P+ V+YTT+++ + + G +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 160 DARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE---VESGVK 216
AR+V EM GV N +TY+VL++G ++ ++ +L+ ++ E +E V +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 217 VAAFANLVDSLCREGFFNEV--------------FRIAEELPCQGSLAEEV--------- 253
+ + DS FFNE+ A + Q LA V
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 254 ------VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLT---KDGDCM 304
+ +++ C++G A R+V MK+ GF P+ Y + +G++ K GD +
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 140/356 (39%), Gaps = 67/356 (18%)
Query: 283 FVPSDVLYNYIIHGLTKDG---DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
F P +Y ++ G K+G D R + + TY +V A + +D
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
+AR+VL M R GV RI T N ++
Sbjct: 470 RARQVLAEMARM-GVPANRI----------------------------------TYNVLL 494
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISG--LLDATRVDEAFDL-FHRVMP 456
G+CK +D A +L++M PDVVS+ +I G L+D D A L F M
Sbjct: 495 KGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID----DSAGALAFFNEMR 550
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG-IGADSTTYTIIVEGLCDCDQI 515
G+ P ++Y L++ +P A V+ M++D + D + ++VEG C I
Sbjct: 551 TRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLI 610
Query: 516 EEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVD------------ 562
E+A+ + +G + N Y ++ G+ ++ +A E+ +
Sbjct: 611 EDAQRVVSR-MKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSD 669
Query: 563 --SGVSPNIFS-----YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILH 611
S +P + + L + +A +I+ M++NG+ P+ ++ ++
Sbjct: 670 SSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIY 725
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP-NVVSYTTLINGYCSVGGIGD 160
G P+ ++Y LM F + +P A+R+F +M N +++++ L+ GYC +G I D
Sbjct: 553 GIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIED 612
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
A++V M E+G PN TY L GV Q R L ++ ER +V+
Sbjct: 613 AQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVK 662
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDM-KNRGHCPNVVSYTTLINGYCSVG 156
+A+ G + + Y+ L+ +C + A + +M ++ G P+VVSY +I+G +
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A F+EM G+ P ++Y+ L++ + G +L ++++ M + V
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFA----MSGQPKLANRVFDEMMNDPRVKVD 593
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+ A+ LV+ CR G + R+ + G YG + + + + + A +
Sbjct: 594 LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWK 653
Query: 277 EMKKRGFV-----PSD 287
E+K+R V PSD
Sbjct: 654 EIKERCAVKKKEAPSD 669
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 41/241 (17%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKK---RGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
+Y ++ K GR AR++ M++ R P +V Y ++ G R Q
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM---------------------- 348
TY VL++ C +D+A ++L+ M
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 349 -------------LRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSML-ESQCRADVI 393
+R G+ T+I Y ++A M+ + + + D+I
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
N ++ G+C+ G +++A +V+ M F P+V ++ ++ +G+ A + +A L+
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFY-PNVATYGSLANGVSQARKPGDALLLWKE 654
Query: 454 V 454
+
Sbjct: 655 I 655
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 124/552 (22%), Positives = 202/552 (36%), Gaps = 75/552 (13%)
Query: 128 RIF-FDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
R+F F ++ + PNV+ Y ++ G + R + EM +GV P + TY +L+
Sbjct: 130 RVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLV-- 187
Query: 187 VLQERDLEGGRELMCK--LW-----ERMSV--EVESGVKVAAFANL-------------- 223
D+ G L+ + LW +RM EV V F N
Sbjct: 188 -----DVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC 242
Query: 224 ----------VDSLCREG----------FFN-EVFRIAEELPCQGSL------------- 249
+D + G F + E+F++ P + SL
Sbjct: 243 AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKP 302
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+ +ID K GR + AA + EM K G V +N +IH G
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV-DKTRIYNIYLRAXX 368
TY +L+ D++ A E + +RK G+ T + L
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYR-KIRKVGLFPDTVTHRAVLHILC 421
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
M + R D ++ ++ + V+E L V L +F V
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY-----VNEGLVVQAKALFERFQLDCV 476
Query: 429 VSFTT---VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
+S TT VI + EA +F+ +G R V+ YN +I+ K K A
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
++ M + G D TY + + L D ++EA+ +++ YAA++
Sbjct: 537 LFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV 605
R G ++A + +GV PN Y LIN + EA Q R M+++G+ + +
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 606 TWRILHKIQGKV 617
L K KV
Sbjct: 657 VLTSLIKAYSKV 668
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/460 (18%), Positives = 178/460 (38%), Gaps = 50/460 (10%)
Query: 144 SYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
++ TLI+ Y G + DA +F EML+SGV +++T
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVT------------------------ 342
Query: 204 WERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
F ++ + G +E + +++ +G + Y ++
Sbjct: 343 ----------------FNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
G A +++K G P V + ++H L + +H
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 324 TYKVLVEALCHVFDVDKAR---EVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXX 380
+ V+++ + V +A+ E +L + ++Y A
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVY--AEKGLWVEAETVFYG 504
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
+ Q R DV+ N +I + K ++AL + + M + PD ++ ++ L
Sbjct: 505 KRNMSGQ-RNDVLEYNVMIKAYGKAKLHEKALSLFKGM-KNQGTWPDECTYNSLFQMLAG 562
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
VDEA + ++ ++G +P TY A+I +L +DA +Y +M G+ +
Sbjct: 563 VDLVDEAQRILAEML-DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEV 621
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYE 559
Y ++ G + +EEA ++ ++ G+ N V +++K + G EA +
Sbjct: 622 VYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
+ DS P++ + N +++ L + SEA I +++ G
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 131/612 (21%), Positives = 222/612 (36%), Gaps = 79/612 (12%)
Query: 40 TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA 99
T +H SEA G PD +T N+LL+ L + AL +
Sbjct: 345 TMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS--LHADAGDIEAALEYYRKIR 402
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIG 159
K G P V + ++ C + + + +M + S ++ Y + G +
Sbjct: 403 KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVV 462
Query: 160 DARKVFDEMLESGVEPNSLTYSVLI-----RGVLQE--------RDLEGGR------ELM 200
A+ +F E + +S T + +I +G+ E R++ G R +M
Sbjct: 463 QAKALF-ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 201 CKLWERMSVEVES-----GVKVAA-------FANLVDSLCREGFFNEVFRIAEELPCQGS 248
K + + + ++ G+K + +L L +E RI E+ G
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC 581
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
Y MI S ++G A + M+K G P++V+Y +I+G + G Q
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
L++A V +++AR V M EG N L +
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLC 700
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
+ L + DVI+ T++ + G +DEA++V ++M + D
Sbjct: 701 ADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS-DC 759
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
SF V++ ++ E +LFH ++ E L T+ L L K P++A
Sbjct: 760 TSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA----- 814
Query: 489 SMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
+ T Y EAK I + +YA L
Sbjct: 815 ------VSQLQTAYN-------------EAKPLATPAITATLFSAMGLYAYAL------- 848
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILI---NCACHLDLKSEAYQIVREMKKNGLNPDCV 605
E+C EL + F+YN +I + + +D+ +AY M++ GL PD V
Sbjct: 849 ---ESCQ---ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYM---RMQEKGLEPDIV 899
Query: 606 TWRILHKIQGKV 617
T L I GK
Sbjct: 900 TQAYLVGIYGKA 911
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 7/330 (2%)
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
K+R ++P + +Y+ +I + K G Y L+ A H D
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 339 DKAREVLKLMLRK-EGVDKTR----IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
KA E ++ L K +G+++ + YNI LRA + S DV
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N V++ + K G + E VL M + C PD+++F +I ++ F
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+M + +P + T+N++I K + + A V+ M TY ++ C
Sbjct: 304 LM-RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ A+ + +V + A+L+ CR+G + EA + V P+ +Y
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPD 603
L D+K + ++++M+K+G+ P+
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 7/330 (2%)
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
K+R ++P + +Y+ +I + K G Y L+ A H D
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 339 DKAREVLKLMLRK-EGVDKTR----IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
KA E ++ L K +G+++ + YNI LRA + S DV
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N V++ + K G + E VL M + C PD+++F +I ++ F
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+M + +P + T+N++I K + + A V+ M TY ++ C
Sbjct: 304 LM-RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ A+ + +V + A+L+ CR+G + EA + V P+ +Y
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPD 603
L D+K + ++++M+K+G+ P+
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D LN +I G C++G+++ AL++L + K P+V++F+ +I G + + +EAF L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQK-SRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
R M + + P +T+N LI GL K R + + M G + TY ++ GL
Sbjct: 260 LER-MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 511 DCDQIEEAKSFWHDVI-WPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
D + EAK +I W G+ +F+ Y ++ GLC + + E L ++V+ G P
Sbjct: 319 DKKRNLEAKEMMSQMISW--GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Query: 569 IFSYNILINC 578
+ ++ C
Sbjct: 377 TLMWWKVVQC 386
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 39/302 (12%)
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGS--LAEEVVYGQMIDSLCKVGRYHGAARIV 275
+ +A +++ + ++E+ + + + +EE Y M GR + A I+
Sbjct: 96 SLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEIL 155
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
+ M G PS +N+I++ L D +K+ V A
Sbjct: 156 FGMPDFGCWPSSKSFNFILNLLV------------------SAKLFDEIHKIFVSAPKLG 197
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
++D NI ++ + + R +V+T
Sbjct: 198 VEIDAC-----------------CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTF 240
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+ +I GFC G +EA K+L+ M + PD ++F +ISGL RV+E DL R M
Sbjct: 241 SPLIRGFCNKGKFEEAFKLLERMEKERI-EPDTITFNILISGLRKKGRVEEGIDLLER-M 298
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
G P TY ++ GL KR +A + S M+S G+ +Y +V GLC+ +
Sbjct: 299 KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 516 EE 517
E
Sbjct: 359 VE 360
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A I F M + G P+ S+ ++N S + K+F + GVE ++ ++LI+
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPC 245
G+ + +LE +L+ + ++ +S V F+ L+ C +G F E F++ E +
Sbjct: 211 GLCESGNLEAALQLLDEFPQQ-----KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
+ + + + +I L K GR ++ MK +G P+ Y +++GL +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY 360
+ +YK +V LC V + VL+ M+ V KT ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 14/226 (6%)
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP------DVVSFTTVISGLLDA 441
C + N ++N DE K+ AP D +I GL ++
Sbjct: 163 CWPSSKSFNFILNLLVSAKLFDEIHKIF-------VSAPKLGVEIDACCLNILIKGLCES 215
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
++ A L P+ RP V+T++ LIRG + +AF + M + I D+ T
Sbjct: 216 GNLEAALQLLDE-FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTIT 274
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
+ I++ GL ++EE + + Y +L GL EA + +++
Sbjct: 275 FNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMI 334
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
G+ P+ SY ++ C E ++R+M +G P + W
Sbjct: 335 SWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV--ISGLLDATRVDEAFDLFHRVM 455
+IN F + DE +V++ + + K C F + I G L A R++ A ++ M
Sbjct: 101 MINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNL-AGRINRAIEILFG-M 158
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
P+ G P ++N ++ L K ++ ++ S G+ D+ I++
Sbjct: 159 PDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILI--------- 209
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
KGLC SGN A L E PN+ +++ L
Sbjct: 210 --------------------------KGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPL 243
Query: 576 INCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
I C+ EA++++ M+K + PD +T+ IL I G +K + E
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNIL--ISGLRKKGRVEE 290
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C V SF ++S +++ ++DEA F + + G+ P +VTYN +I+ L + +D
Sbjct: 153 CERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDI 212
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILK 542
++ + +G D ++ ++E + E W D++ + N Y + ++
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW-DLMKSKNLSPNIRSYNSRVR 271
Query: 543 GLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
GL R+ F +A + + + G+SP++ +YN LI + E + EMK+ GL P
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331
Query: 603 DCVTWRIL 610
D VT+ +L
Sbjct: 332 DTVTYCML 339
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D++T NT+I C+ GS+D+ L + +++ F PD++SF T++ E D
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGF-EPDLISFNTLLEEFYRRELFVEG-DR 249
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+M L P + +YN+ +RGL + K+ DA + M ++GI D TY ++
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV--SPN 568
+ +EE ++++ D Y ++ LC+ G+ + A E + + PN
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Query: 569 IF 570
++
Sbjct: 370 MY 371
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 37 SIATTLHALCDSNRFSEAHQCFS-ISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRS 95
S L A +S + EA + F + G PD T N ++ L R + ++
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 96 LIVAKPGFVPSLVNYHRLMDQFCVFRRP--CDAHRIFFDMKNRGHCPNVVSYTTLINGYC 153
L K GF P L++++ L+++F +RR + RI+ MK++ PN+ SY + + G
Sbjct: 219 L--EKNGFEPDLISFNTLLEEF--YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
DA + D M G+ P+ TY+ LI + +LE E+M K + M E
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE---EVM-KCYNEMK---EK 327
Query: 214 GV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
G+ + L+ LC++G + ++EE L+ +Y +++ L G+ A
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Query: 272 ARIVYEMKKRGF 283
++V K + +
Sbjct: 388 TQLVKNGKLQSY 399
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNR-GHCPNVVSYTTLINGYCSVGGIGDARKV 164
++ +++ L+ + ++ +A + F ++ + G P++V+Y T+I C G + D +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDL--EGGRELMCKLWERMSVEVESGVKVAAFAN 222
F+E+ ++G EP+ ++++ L+ + R+L EG R +W+ M + S + ++ +
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYR-RELFVEGDR-----IWDLMKSKNLSP-NIRSYNS 268
Query: 223 LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
V L R F + + + + +G + Y +I + + EMK++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 283 FVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAR 342
P V Y +I L K GD R + + YK +VE L +D+A
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 343 EVLK 346
+++K
Sbjct: 389 QLVK 392
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 195/478 (40%), Gaps = 61/478 (12%)
Query: 33 SLQHSI---ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARL-LRSRTPL- 87
+L+H I A T+H L + +A SL + S PD + LL + S TPL
Sbjct: 108 NLRHGIKSYALTIHILVKARLLIDARALIESSLLN-SPPDSDLVDSLLDTYEISSSTPLV 166
Query: 88 -----QTWALVRSLIVA--------KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMK 134
Q +A +R L + GF S++ + L+ + RI+
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 135 NRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLE 194
++ PN ++ +I C G + + + D + P+ + + L+ VL+E +E
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 195 GGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV 254
L+ +L + V G + +A +EG ++ +E+ +G A V
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAK-----AKEGDLVSARKVFDEMLQRGFSANSFV 341
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y + C+ G A R++ EM++ G P D +N +I G + G +G +
Sbjct: 342 YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
+ +V+++ + +V++A E+L + +DK +
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILT-----KSIDKGFV--------------- 441
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
D T + +I GF + +D+ALK+ +M K +P F ++
Sbjct: 442 ---------------PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM-SPGFEVFRSL 485
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
I GL +V EA + + ++M + + P Y+ALI+ K+ +A VY+ M+S
Sbjct: 486 IVGLCTCGKV-EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
VITLNT+I+ + +D+ + + + + K P+ ++ +I L R+ E DL
Sbjct: 199 VITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
R+ + L P V+ +L+ + + R ++ + ++ + D+ Y+I+V
Sbjct: 258 DRICGKRCL-PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ A+ + +++ ++FVY ++ C G+ EA L E+ +SGVSP +
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKV 617
+N LI + + + M GL P C + + K K+
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKI 422
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 2/258 (0%)
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
++++ +LK +L K V T Y+I + A ML+ A+
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+ C+ G V EA ++L +M +P +F +I G ++ + + VM
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESG-VSPYDETFNCLIGGFARFGWEEKGLE-YCEVMVT 402
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
GL P +N +++ + K++ N A + + + G D TY+ ++ G + + I++
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
A ++++ + V+ +++ GLC G +L + + PN Y+ LI
Sbjct: 463 ALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIK 522
Query: 578 CACHLDLKSEAYQIVREM 595
+ K+ A ++ EM
Sbjct: 523 AFQKIGDKTNADRVYNEM 540
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 2/232 (0%)
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
D I + V+ K G + A KV +ML F A V +T + + V EA
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV-YTVFVRVCCEKGDVKEAER 360
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
L M E+G+ P T+N LI G + MV+ G+ + + +V+ +
Sbjct: 361 LLSE-MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSV 419
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
+ + A I + D Y+ +++G + ++A YE+ +SP
Sbjct: 420 SKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGF 479
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQT 621
+ LI C + ++ MKK + P+ + L K K+ +T
Sbjct: 480 EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKT 531
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 131/589 (22%), Positives = 221/589 (37%), Gaps = 60/589 (10%)
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSL----VNYHRLMDQFCVF 120
G R+ VL+ L SR L+ + SL+ P L +N+ L+ ++C
Sbjct: 558 GQKLSRRSFAVLMRSLCASRAHLR---VSISLLEKWPKLAYQLDGETLNF--LVQEYCKK 612
Query: 121 RRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF-----DEMLESGVEP 175
+ IF M H + V+YT+LI +C + D V+ D L +
Sbjct: 613 GFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDC 672
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
L ++ +G+++E + +L+ER+ + + A V+ L GF
Sbjct: 673 GDLWNCLVRKGLVEE---------VVQLFERVFISYPLS-QSEACRIFVEKLTVLGFSCI 722
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS--------- 286
+ + L +G + E+ VY +I LC + A I+ EM + +PS
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 287 --------------------DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYK 326
++ +I GL+ G + + Y
Sbjct: 783 RLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYN 842
Query: 327 VLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
V+ + C + K EVL LM+RK + + Y Y+R +L
Sbjct: 843 VMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLG 902
Query: 387 QCR-ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
+ VI N +I + + E KVL +M G+ PD +F ++ G +
Sbjct: 903 ESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEM-QGRGVLPDETTFNFLVHGYSSSADYS 961
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG-ADSTTYTI 504
+ + M G++P + A+ L A ++ M S G S T
Sbjct: 962 SSLR-YLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTK 1020
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
IVE L +I +A+ F V + N Y I+K L GN + A H L ++ +
Sbjct: 1021 IVETLISKGEIPKAEDFLTRVTRNGMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKNQ 1078
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR-ILHK 612
P SY+ +IN + +A EM + GL+P TW ++HK
Sbjct: 1079 SIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHK 1127
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 186/511 (36%), Gaps = 49/511 (9%)
Query: 100 KPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFD-MKNRGHCP--NVVSYTTLINGYCSVG 156
+ G VP Y L+DQ R A+RI D ++ R N+ S +I C
Sbjct: 211 RKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQ 270
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ +AR + +++ G NS YS + G +++D E +L+ + E V+ E V
Sbjct: 271 KVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE---DLLSFIGE---VKYEPDVF 324
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
V ++ SLCR + EEL G +EV +G +I C G A +
Sbjct: 325 VGN--RILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS 382
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
E+ +G+ P YN I+ GL + G + T+K++V C
Sbjct: 383 EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKAR 442
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
++A+ ++ M ++ +++ + A L + + D
Sbjct: 443 QFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDP---------LAVRLKRD----- 488
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
S + D+ G + D+ ++ ++ +LD + + E L R
Sbjct: 489 --------NDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASE 540
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD----------------GIGADST 500
+ L+ + + + R KL R + A + S S D
Sbjct: 541 DGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGE 600
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
T +V+ C +K +H ++ DN Y ++++ C+ N+ +
Sbjct: 601 TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA 660
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQI 591
+ P++ L NC L E Q+
Sbjct: 661 QNDNWLPDLNDCGDLWNCLVRKGLVEEVVQL 691
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/490 (19%), Positives = 185/490 (37%), Gaps = 64/490 (13%)
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
++ ++G+ P+V SY +++G G + DEM E+G+ + T+ +++ G + R
Sbjct: 383 EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKAR 442
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
E + ++ K++ +E KV L ++ GF R+ + S AE
Sbjct: 443 QFEEAKRIVNKMFGYGLIEAS---KVE--DPLSEAFSLVGFDPLAVRLKRDNDSTFSKAE 497
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL--YNYIIHGLTKDGDCMRGYQX 309
D L G Y YE + + VL +N +I ++DGD +
Sbjct: 498 ------FFDDLGN-GLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRL 550
Query: 310 XXXXXXXXXXXCDHTYKVLVEALC----HV-FDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
++ VL+ +LC H+ + + KL + +G N +
Sbjct: 551 LDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDG----ETLNFLV 606
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
+ M++ D +T ++I FCK ++++ L V +
Sbjct: 607 QEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWL 666
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP---------------------- 462
PD+ + + L+ V+E LF RV L
Sbjct: 667 -PDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHS 725
Query: 463 ---------CVV---TYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
C+V YN LI+GL K+ + AF + M+ + +++ LC
Sbjct: 726 VVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLC 785
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
++ A + I ++V+ A++KGL +G +A + L ++ +G+S
Sbjct: 786 RANKAGTAFNL------AEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNK 839
Query: 571 SYNILINCAC 580
YN++ C
Sbjct: 840 IYNVMFQGYC 849
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 8/268 (2%)
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
FD KA + M RK V T Y I + +E++ + + +
Sbjct: 197 FDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNI 256
Query: 396 NT---VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
++ VI C V EA +VL L+ C + ++ + G + ++
Sbjct: 257 DSIGKVIELLCLDQKVQEA-RVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIG 315
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
V E P V N ++ L + A+ + G D T+ I++ C
Sbjct: 316 EVKYE----PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYE 371
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
I+ A + +++ D + Y AIL GL R G + L E+ ++G+ ++ ++
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTF 431
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGL 600
I++ C EA +IV +M GL
Sbjct: 432 KIMVTGYCKARQFEEAKRIVNKMFGYGL 459
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 155/389 (39%), Gaps = 48/389 (12%)
Query: 74 NVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDM 133
N L+ L + + W+LV + K + S + + ++ R+ +A F M
Sbjct: 132 NALIESLGKIKQFKLIWSLVDDMKAKK---LLSKETFALISRRYARARKVKEAIGAFHKM 188
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
+ G + +++ +GDA+KVFD+M + EP+ +Y++L+ G QE +L
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 194 EGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV 253
VD + R E+ +G + V
Sbjct: 249 LR----------------------------VDEVNR------------EMKDEGFEPDVV 268
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
YG +I++ CK +Y A R EM++R PS ++ +I+GL + +
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERS 328
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXX 373
TY LV A C ++ A + + M K R Y+I L
Sbjct: 329 KSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
+M C V T ++ FC +D A+K+ +M GK P + F++
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM-KGKGVLPGMHMFSS 444
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRP 462
+I+ L ++DEA + F+ ++ + G+RP
Sbjct: 445 LITALCHENKLDEACEYFNEML-DVGIRP 472
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/347 (18%), Positives = 133/347 (38%), Gaps = 39/347 (11%)
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y +I+SL K+ ++ +V +MK + + + + I +
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVKEAIGAFHKME 189
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
+ +++ L +V A++V M +K + Y I L
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M + DV+ +IN CK +EA++ +M + C P F ++
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQ-RNCKPSPHIFCSL 308
Query: 435 ISGLLDATRVDEAFDLFHRV----------------------------------MPENGL 460
I+GL ++++A + F R M G+
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV 368
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
P TY+ ++ L +++R +A+ VY +M + +TY I+V C+ ++++ A
Sbjct: 369 GPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIK 425
Query: 521 FWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
W ++ + ++++++ LC +EAC + E++D G+ P
Sbjct: 426 IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 45/240 (18%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL---LDATRVDEAFDLF 451
N +++ K+ +V +A KV M +F PD+ S+T ++ G L+ RVDE
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRF-EPDIKSYTILLEGWGQELNLLRVDEV---- 254
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
+R M + G P VV Y II+ C
Sbjct: 255 NREMKDEGFEPDVVA-----------------------------------YGIIINAHCK 279
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ EEA F++++ + ++ +++ GL N+A F SG +
Sbjct: 280 AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL--HKIQGKVRKQTLSEYQSLS 629
YN L+ C +AY+ V EM+ G+ P+ T+ I+ H I+ + K+ YQ++S
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 44 ALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGF 103
A C S R +A++ G P+ RT +++L L+R + + + + +++
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---- 401
Query: 104 VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARK 163
P++ Y ++ FC R A +I+ +MK +G P + +++LI C + +A +
Sbjct: 402 -PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 460
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
F+EML+ G+ P +S L + +L E + +L+ K+
Sbjct: 461 YFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L L S +A + F PD ++ +LL + L+ + R +
Sbjct: 204 LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM--KDE 261
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF P +V Y +++ C ++ +A R F +M+ R P+ + +LING S + DA
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+ F+ SG + TY+ L+ + +E K + M ++ G +
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA----YKTVDEMRLK-GVGPNARTYD 376
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++ L R E + + + + C+ +++ Y M+ C R A +I EMK +
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTMSCEPTVS---TYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 282 GFVPSDVLYNYIIHGL 297
G +P +++ +I L
Sbjct: 434 GVLPGMHMFSSLITAL 449
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/477 (20%), Positives = 173/477 (36%), Gaps = 77/477 (16%)
Query: 81 LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP 140
LR + LV I+ K F P ++ ++ L+D + + +A ++ + + P
Sbjct: 151 LRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP 210
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSL---TYSVLIRGVLQERDLEGGR 197
+Y LI YC G I A V EM V P ++ Y+ I G+++ + G
Sbjct: 211 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRK---GNT 267
Query: 198 ELMCKLWERMS-------------------------------VEVES---GVKVAAFANL 223
E +++RM E+ S + + L
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
V++ REG + I E+L G + VY +++S + G +GAA I M+ G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
P YN ++ + G ++ +L+ A DV K
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
++K M E+ D LN+++N +
Sbjct: 448 IVK-----------------------------------EMSENGVEPDTFVLNSMLNLYG 472
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
+ G + K+L +M G C D+ ++ +I+ A ++ +LF + E RP
Sbjct: 473 RLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVE-LKEKNFRPD 530
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
VVT+ + I + K V+ M+ G D T +++ +Q+E+ S
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 587
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 142/369 (38%), Gaps = 41/369 (11%)
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
++K F P + +N +I + + TY +L++A C
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 338 VDKAREVLKLMLRKEGVDKT---RIYNIYLRAXXXXXXXXXXXXXXXS-MLESQCRADVI 393
+++A VL M KT +YN Y+ M +C+
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N +IN + K + K+ +M + C P++ ++T +++ ++A ++F +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ E+GL P V YNAL+ + P A ++S M G D +Y I+V+
Sbjct: 347 -LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 514 QIEEAKSFWHDV----IWPS------------------------------GIH-DNFVYA 538
+A++ + ++ I P+ G+ D FV
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 539 AILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
++L R G F + L E+ + + +I +YNILIN ++ E+K+
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 599 GLNPDCVTW 607
PD VTW
Sbjct: 526 NFRPDVVTW 534
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 344 VLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
V + +LRK I +N+ + A +LES+ T +I +
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFT---TVISGLLDAT-RVDEAFDLFHRVMPEN 458
C G ++ A VL +M +P + T I GL+ +EA D+F R M +
Sbjct: 223 CMAGLIERAEVVLVEM-QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR-MKRD 280
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV-----EGLCDCD 513
+P TYN +I K + ++ +Y M S + TYT +V EGLC+
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ E + D + P D +VY A+++ R+G A + G P+ SYN
Sbjct: 341 E-EIFEQLQEDGLEP----DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 395
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
I+++ L S+A + EMK+ G+ P + +L K R T E
Sbjct: 396 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 446
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 15/252 (5%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + Y+ LM+ + P A IF M++ G P+ SY +++ Y G DA
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
VF+EM G+ P ++ +L+ + RD+ ++ + MS E+GV+ F
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV----KEMS---ENGVEPDTFV 463
Query: 222 --NLVDSLCREGFFNEVFRIAEEL---PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
++++ R G F ++ +I E+ PC ++ Y +I+ K G +
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS---TYNILINIYGKAGFLERIEELFV 520
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
E+K++ F P V + I ++ ++ + T KVL+ A
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 580
Query: 337 DVDKAREVLKLM 348
V++ VL+ M
Sbjct: 581 QVEQVTSVLRTM 592
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/477 (20%), Positives = 173/477 (36%), Gaps = 77/477 (16%)
Query: 81 LRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCP 140
LR + LV I+ K F P ++ ++ L+D + + +A ++ + + P
Sbjct: 129 LRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP 188
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSL---TYSVLIRGVLQERDLEGGR 197
+Y LI YC G I A V EM V P ++ Y+ I G+++ + G
Sbjct: 189 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRK---GNT 245
Query: 198 ELMCKLWERMS-------------------------------VEVES---GVKVAAFANL 223
E +++RM E+ S + + L
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
V++ REG + I E+L G + VY +++S + G +GAA I M+ G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
P YN ++ + G ++ +L+ A DV K
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFC 403
++K M E+ D LN+++N +
Sbjct: 426 IVK-----------------------------------EMSENGVEPDTFVLNSMLNLYG 450
Query: 404 KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPC 463
+ G + K+L +M G C D+ ++ +I+ A ++ +LF + E RP
Sbjct: 451 RLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVE-LKEKNFRPD 508
Query: 464 VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
VVT+ + I + K V+ M+ G D T +++ +Q+E+ S
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 142/369 (38%), Gaps = 41/369 (11%)
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
++K F P + +N +I + + TY +L++A C
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 338 VDKAREVLKLMLRKEGVDKT---RIYNIYLRAXXXXXXXXXXXXXXXS-MLESQCRADVI 393
+++A VL M KT +YN Y+ M +C+
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
T N +IN + K + K+ +M + C P++ ++T +++ ++A ++F +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ E+GL P V YNAL+ + P A ++S M G D +Y I+V+
Sbjct: 325 -LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 514 QIEEAKSFWHDV----IWPS------------------------------GIH-DNFVYA 538
+A++ + ++ I P+ G+ D FV
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 539 AILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
++L R G F + L E+ + + +I +YNILIN ++ E+K+
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 599 GLNPDCVTW 607
PD VTW
Sbjct: 504 NFRPDVVTW 512
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 344 VLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
V + +LRK I +N+ + A +LES+ T +I +
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVSFT---TVISGLLDAT-RVDEAFDLFHRVMPEN 458
C G ++ A VL +M +P + T I GL+ +EA D+F R M +
Sbjct: 201 CMAGLIERAEVVLVEM-QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR-MKRD 258
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV-----EGLCDCD 513
+P TYN +I K + ++ +Y M S + TYT +V EGLC+
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 514 QIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ E + D + P D +VY A+++ R+G A + G P+ SYN
Sbjct: 319 E-EIFEQLQEDGLEP----DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 373
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSE 624
I+++ L S+A + EMK+ G+ P + +L K R T E
Sbjct: 374 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 424
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 15/252 (5%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + Y+ LM+ + P A IF M++ G P+ SY +++ Y G DA
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
VF+EM G+ P ++ +L+ + RD+ ++ + MS E+GV+ F
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV----KEMS---ENGVEPDTFV 441
Query: 222 --NLVDSLCREGFFNEVFRIAEEL---PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
++++ R G F ++ +I E+ PC ++ Y +I+ K G +
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS---TYNILINIYGKAGFLERIEELFV 498
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVF 336
E+K++ F P V + I ++ ++ + T KVL+ A
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 558
Query: 337 DVDKAREVLKLM 348
V++ VL+ M
Sbjct: 559 QVEQVTSVLRTM 570
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 184/431 (42%), Gaps = 83/431 (19%)
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
+M+ G ++ ++T LI+ Y IG VF++M +SG E ++ Y+++IR +
Sbjct: 214 EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLC--- 270
Query: 192 DLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
+ G +L + ++ M +E G+ + + L+D + + + V IA+++ +
Sbjct: 271 -IAGRGDLALEFYKEM---MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEI 326
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
+E +G ++ S C G+ A ++ E+K + D Y
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL-DAKY------------------- 366
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
+++LV+ LC + A E++ +M R++ +D + +Y I
Sbjct: 367 ---------------FEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGI------- 403
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
+I+G+ + V +AL+ + ++ P V
Sbjct: 404 ----------------------------IISGYLRQNDVSKALEQFE-VIKKSGRPPRVS 434
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++T ++ L + ++ +LF+ M ENG+ P V A++ G R +A+ V+SS
Sbjct: 435 TYTEIMQHLFKLKQFEKGCNLFNE-MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSS 493
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGN 549
M GI +Y+I V+ LC + +E ++ + + + +++ ++ + ++G
Sbjct: 494 MEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Query: 550 FNEACHFLYEL 560
E H + E+
Sbjct: 554 -KEKIHLIKEI 563
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 142/332 (42%), Gaps = 11/332 (3%)
Query: 270 GAARIVYE-MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVL 328
G +V+E M+K GF YN +I L G + TYK+L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 329 VEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQC 388
++ + VD + + M+R + + + L++ + +
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM 360
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
D ++ G C+ + +AL+++ M K +V + +ISG L V +A
Sbjct: 361 CLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV--YGIIISGYLRQNDVSKAL 418
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+ F V+ ++G P V TY +++ L+KLK+ +++ M+ +GI DS T +V G
Sbjct: 419 EQFE-VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAG 477
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSG--V 565
+++ EA + + GI + Y+ +K LCRS ++E ++ S +
Sbjct: 478 HLGQNRVAEAWKVFSS-MEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVI 536
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
+IFS+ I + + + E +++E++K
Sbjct: 537 RDDIFSWVI---SSMEKNGEKEKIHLIKEIQK 565
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 193/519 (37%), Gaps = 53/519 (10%)
Query: 130 FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQ 189
F +K G P V +YT ++ + +F+EM+E+G+EP+S+ + ++ G L
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL- 479
Query: 190 ERDLEGGRELMCKLWERMSVEVESGVKVA--AFANLVDSLCREGFFNEVFRIAEELPCQG 247
G+ + + W+ S E G+K +++ V LCR ++E+ +I ++
Sbjct: 480 ------GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 248 SLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGY 307
+ + ++ +I S+ K G ++ E++KR D L +++ + + Y
Sbjct: 534 IVIRDDIFSWVISSMEKNGEKE-KIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDY 592
Query: 308 Q-XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT--------- 357
K+ V+ +C V + E + L K V T
Sbjct: 593 NCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLR 652
Query: 358 --------------------------RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
YN+ ++ M C
Sbjct: 653 HAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLIT 712
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLD--ATRVDEAF 448
T +I + +TG + A++ ++M MG P +F +I+ L + V+EA
Sbjct: 713 QDTWAIMIMQYGRTGLTNIAIRTFKEMKDMG--LIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
F R M +G P + L ++ DA S+ G + Y+I +
Sbjct: 771 RTF-REMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRA 828
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
LC ++EEA S + D + Y +I+ GL + G+ +A + + + G P
Sbjct: 829 LCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPG 888
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ Y LI + + ++M+ P VT+
Sbjct: 889 VHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 140/381 (36%), Gaps = 76/381 (19%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F++M+ +G ++ +I Y G A + F EM + G+ P+S T+ LI
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLI---- 755
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
++C+ + G V + R GF + + + L C
Sbjct: 756 ---------TVLCE---------KKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC--- 794
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
LC+VG A + + K GF P V Y+ I L + G
Sbjct: 795 -------------LCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALS 840
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXX 368
+TY +V L D+ KA +DK
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA------------LDKVN---------- 878
Query: 369 XXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDV 428
SM E + V ++I F K +++ L+ Q M G+ C P V
Sbjct: 879 -------------SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM-EGESCEPSV 924
Query: 429 VSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYS 488
V++T +I G + +V+EA++ F R M E G P TY+ I L + + DA + S
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAF-RNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Query: 489 SMVSDGIGADSTTYTIIVEGL 509
M+ GI + + + GL
Sbjct: 984 EMLDKGIAPSTINFRTVFYGL 1004
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 424 CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDA 483
C D+ ++T +IS A ++ + +F + M ++G YN +IR L R + A
Sbjct: 220 CDKDIRTWTILISVYGKAKKIGKGLLVFEK-MRKSGFELDATAYNIMIRSLCIAGRGDLA 278
Query: 484 FGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKG 543
Y M+ GI TY ++++ + ++++ +S D++ I ++ + +LK
Sbjct: 279 LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKS 338
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
C SG EA + EL + + + + IL+ C + +A +IV MK+ L+ D
Sbjct: 339 FCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-D 397
Query: 604 CVTWRILHKIQGKVRKQTLSE 624
+ I+ I G +R+ +S+
Sbjct: 398 SNVYGII--ISGYLRQNDVSK 416
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 134/383 (34%), Gaps = 81/383 (21%)
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
F ++ + E+ QG L + + MI + G + A R EMK G +PS +
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 293 IIHGL-TKDG----DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
+I L K G + R ++ Y + LC V + A+ L
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY---LGCLCEVGNTKDAKSCLD- 809
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
L K G T Y+IY+RA C+ G
Sbjct: 810 SLGKIGFPVTVAYSIYIRA-----------------------------------LCRIGK 834
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
++EAL L G+ D ++ +++ GLL + +A D + M E G +P V Y
Sbjct: 835 LEEALSELAS-FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS-MKEIGTKPGVHVY 892
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIW 527
+LI +K K+ M + TYT
Sbjct: 893 TSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT------------------------ 928
Query: 528 PSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSE 587
A++ G G EA + + + G SP+ +Y+ INC C +
Sbjct: 929 -----------AMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSED 977
Query: 588 AYQIVREMKKNGLNPDCVTWRIL 610
A +++ EM G+ P + +R +
Sbjct: 978 ALKLLSEMLDKGIAPSTINFRTV 1000
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 55/319 (17%)
Query: 359 IYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM 418
IYN L M ++ C D+ T +I+ + K + + L V + M
Sbjct: 191 IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 250
Query: 419 LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
F D ++ +I L A R D A + F++ M E G+ + TY L+ + K +
Sbjct: 251 RKSGF-ELDATAYNIMIRSLCIAGRGDLALE-FYKEMMEKGITFGLRTYKMLLDCIAKSE 308
Query: 479 R------------------PNDAFG--VYSSMVSDGIGA---------------DSTTYT 503
+ +DAFG + S VS I D+ +
Sbjct: 309 KVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFE 368
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
I+V+GLC +++ +A D++ + D+ VY I+ G R + ++A + S
Sbjct: 369 ILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCV-----------------T 606
G P + +Y ++ L + + EM +NG+ PD V
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 607 WRILHKIQGKVRKQTLSEY 625
W++ ++ K K T Y
Sbjct: 488 WKVFSSMEEKGIKPTWKSY 506
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 127/333 (38%), Gaps = 56/333 (16%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD-ARKVFDEMLESGVEPNSLTYSVLIRGV 187
+F M+ G + +Y +I C + G GD A + + EM+E G+ TY +L+ +
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLC-IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCI 304
Query: 188 LQERDLEGGREL------MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+ ++ + + +C++ E AF L+ S C G E +
Sbjct: 305 AKSEKVDVVQSIADDMVRICEISEH-----------DAFGYLLKSFCVSGKIKEALELIR 353
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
EL + + + ++ LC+ R A IV MK+R S+V Y II G +
Sbjct: 354 ELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQN 412
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
D + + TY E + H+F KL ++G + ++N
Sbjct: 413 DVSKALEQFEVIKKSGRPPRVSTY---TEIMQHLF---------KLKQFEKGCN---LFN 457
Query: 362 IYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMG 421
M+E+ D + + V+ G V EA KV M
Sbjct: 458 --------------------EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSM-EE 496
Query: 422 KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
K P S++ + L ++R DE +F+++
Sbjct: 497 KGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 14/275 (5%)
Query: 29 PSSPSLQHSIATTLHALCDSN--RFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTP 86
PSS + + I LC+ EA + F + SG VPD L L
Sbjct: 746 PSSSTFKCLITV----LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNT 801
Query: 87 LQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYT 146
+ + SL K GF P V Y + C + +A + + +Y
Sbjct: 802 KDAKSCLDSL--GKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYG 858
Query: 147 TLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
++++G G + A + M E G +P Y+ LI +E+ LE E C+ E
Sbjct: 859 SIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE-TCQKMEG 917
Query: 207 MSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
S E V + ++ G E + + +G+ + Y + I+ LC+
Sbjct: 918 ESCEP----SVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQAC 973
Query: 267 RYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ A +++ EM +G PS + + + +GL ++G
Sbjct: 974 KSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
L+ FCV + +A + ++KN+ C + + L+ G C + DA ++ D M
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCRE 230
++ +S Y ++I G L++ D+ K E+ V +SG +V+ + ++ L +
Sbjct: 395 LD-DSNVYGIIISGYLRQNDV-------SKALEQFEVIKKSGRPPRVSTYTEIMQHLFKL 446
Query: 231 -------GFFNEVF----------------------RIAEELPCQGSLAEEVV------Y 255
FNE+ R+AE S+ E+ + Y
Sbjct: 447 KQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSY 506
Query: 256 GQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
+ LC+ RY +I +M V D +++++I + K+G+
Sbjct: 507 SIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 198/470 (42%), Gaps = 25/470 (5%)
Query: 116 QFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
+ +F CDA I + ++ NV S+ +I C +G A F EMLE+ + P
Sbjct: 112 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF--ANLVDSLCREGFF 233
++ + + + GR + + V+SG++ F ++L D + G
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYV-------VKSGLEDCVFVASSLADMYGKCGVL 224
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
++ ++ +E+P + ++A + ++ + G+ A R+ +M+K+G P+ V +
Sbjct: 225 DDASKVFDEIPDRNAVA----WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
+ G G Q + L+ C V ++ A V M K+
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 354 VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALK 413
V +N+ + M + + D +TL T+++ +T ++ +
Sbjct: 341 V----TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRG 473
V + F D+V +TV+ + +A +F + ++ ++ +N L+
Sbjct: 397 VQCYCIRHSF-ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD-----LILWNTLLAA 450
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
+ +A ++ M +G+ + T+ +I+ L Q++EAK + + SGI
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ-MQSSGIIP 509
Query: 534 NFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL 582
N + + ++ G+ ++G EA FL ++ +SG+ PN FS + ++ HL
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/529 (19%), Positives = 195/529 (36%), Gaps = 61/529 (11%)
Query: 117 FCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPN 176
F V +P H + H P+ SY ++ C G I +A + EM +
Sbjct: 15 FSVSSKPSSKHH-----DEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIG 69
Query: 177 SLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG---VKVAAFANLVDSLCREGFF 233
Y +++G + ERDL G+++ ++ + + K+ F D+L
Sbjct: 70 PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDAL------ 123
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL---- 289
IAE L + + + +I C++G GA EM + P + +
Sbjct: 124 ----EIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV 179
Query: 290 -----------YNYIIHG-LTKDG--DCMRGYQXXXXXXXXXXXXCDHTYKVLVEA---- 331
+ +HG + K G DC+ D KV E
Sbjct: 180 CKACGALKWSRFGRGVHGYVVKSGLEDCVF-VASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 332 -------LCHVFDVDKAREVLKLM--LRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXX 381
+ K E ++L +RK+GV+ TR+ + L A
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
+ + D I +++N +CK G ++ A +M+ + DVV++ +ISG +
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYA-----EMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
V++A + + E CV T L+ + + V + +D
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCV-TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
+ +++ C I +AK + + D ++ +L SG EA Y +
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVE----KDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
GV PN+ ++N++I EA + +M+ +G+ P+ ++W +
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 130/322 (40%), Gaps = 14/322 (4%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+++ ++ ++ + +A +F M++ G PN++S+TT++NG G +A
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
+M ESG+ PN+ + +V + L GR + + + + V+
Sbjct: 531 ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL----QHSSLVSIET 586
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+LVD + G N+ AE++ +E + MI + G A + ++
Sbjct: 587 SLVDMYAKCGDINK----AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 642
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX-CDHTYKVLVEALCHVFDVDK 340
G P ++ ++ GD + + C Y ++V+ L + +K
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 341 AREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVIN 400
A +++ M K R+ + + +LES+ + T+ N
Sbjct: 703 ALRLIEEMPFK---PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPE-NSGNYVTISN 758
Query: 401 GFCKTGSVDEALKVLQDMLMGK 422
+ GS DE +K +++M+ K
Sbjct: 759 AYAVEGSWDEVVK-MREMMKAK 779
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
IT N++I+GFCK VD+A ++L D + K C+PDVV+F+T+I+G A RVD ++F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRML-DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
M G+ VTY LI G ++ + A + + M+S G+ D T+ ++ GLC
Sbjct: 69 CE-MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 512 CDQIEEAKSFWHDV 525
++ +A + D+
Sbjct: 128 KKELRKAFAILEDL 141
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P+ + Y+ ++D FC R DA R+ M ++G P+VV+++TLINGYC + + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
F EM G+ N++TY+ LI G Q DL+ ++L L E +S V F ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL---LNEMISCGV--APDYITFHCML 122
Query: 225 DSLCREGFFNEVFRIAEEL 243
LC + + F I E+L
Sbjct: 123 AGLCSKKELRKAFAILEDL 141
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 58/96 (60%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+A G P +V + L++ +C +R + IF +M RG N V+YTTLI+G+C VG
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 95
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
+ A+ + +EM+ GV P+ +T+ ++ G+ +++L
Sbjct: 96 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 70/137 (51%)
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
P +TYN++I G K R +DA + SM S G D T++ ++ G C +++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 522 WHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACH 581
+ ++ + + Y ++ G C+ G+ + A L E++ GV+P+ +++ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 582 LDLKSEAYQIVREMKKN 598
+A+ I+ +++K+
Sbjct: 128 KKELRKAFAILEDLQKS 144
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 426 PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFG 485
P +++ ++I G RVD+A + M G P VVT++ LI G K KR ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDS-MASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLC 545
++ M GI A++ TYT ++ G C ++ A+ +++I D + +L GLC
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 546 RSGNFNEACHFLYELVDS 563
+A L +L S
Sbjct: 127 SKKELRKAFAILEDLQKS 144
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 348 MLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
MLR T YN + SM C DV+T +T+ING+CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 408 VDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
VD +++ +M A + V++TT+I G +D A DL + M G+ P +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVA-NTVTYTTLIHGFCQVGDLDAAQDLLNE-MISCGVAPDYITF 118
Query: 468 NALIRGLYKLKRPNDAFGVYSSM 490
+ ++ GL K AF + +
Sbjct: 119 HCMLAGLCSKKELRKAFAILEDL 141
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
+ +++D C++ ++ R+ + + +G + V + +I+ CK R I EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFD 337
+RG V + V Y +IHG + GD + Q D+ T+ ++ LC +
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGD-LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 338 VDKAREVLKLMLRKE 352
+ KA +L+ + + E
Sbjct: 131 LRKAFAILEDLQKSE 145
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+ + K G + A KV ++M + C V+SF ++S + + D +LF+ + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEM-PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
++P +V+YN LI+ L + +A + + + G+ D T+ ++ Q E
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ W ++ + D Y A L GL E + EL SG+ P++FS+N +I
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ + EA +E+ K+G PD T+ +L
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ D+++ NT+I C+ S+ EA+ +L D + K PD+V+F T LL ++ + F
Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALL-DEIENKGLKPDIVTFNT----LLLSSYLKGQF 231
Query: 449 DLFHRV---MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
+L + M E + + TYNA + GL + + ++ + + G+ D ++ +
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ G + +++EA++++ +++ D +A +L +C++G+F A E
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKN 598
+ L++ + EA +IV+ K N
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEAEEIVKIAKTN 384
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC-APDVVSFTTVISGLLDA 441
M C+ V++ N +++ + + D ++ L + L GK PD+VS+ T+I L +
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFD-VVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 442 TRVDEAFDLFHRVMPEN-GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
+ EA L + EN GL+P +VT+N L+ Y + +++ MV + D
Sbjct: 194 DSLPEAVALLDEI--ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIR 251
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
TY + GL + + +E + + ++ D F + A+++G G +EA + E+
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
V G P+ ++ +L+ C A ++ +E
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 12/243 (4%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKV 164
+L++ +RL +F V +F ++ + P++VSY TLI C + +A +
Sbjct: 149 ALLSAYRLSKKFDV------VEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
DE+ G++P+ +T++ L+ L+G EL ++W +M VE + + + +
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSY----LKGQFELGEEIWAKM-VEKNVAIDIRTYNARL 257
Query: 225 DSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
L E E+ + EL G + + MI G+ A E+ K G+
Sbjct: 258 LGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR 317
Query: 285 PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREV 344
P + ++ + K GD + T + LV+ L ++A E+
Sbjct: 318 PDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Query: 345 LKL 347
+K+
Sbjct: 378 VKI 380
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 88 QTWALVRSLIVAKPGFV---PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVS 144
+ + +V L PG + P +V+Y+ L+ C +A + +++N+G P++V+
Sbjct: 158 KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVT 217
Query: 145 YTTL-----INGYCSVG------------------------GIGDARK------VFDEML 169
+ TL + G +G G+ + K +F E+
Sbjct: 218 FNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELK 277
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
SG++P+ +++ +IRG + E G+ + W + V+ A FA L+ ++C+
Sbjct: 278 ASGLKPDVFSFNAMIRGSINE-----GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCK 332
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV 284
G F + +E + L + Q++D L K + A IV K F+
Sbjct: 333 AGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 129/320 (40%), Gaps = 19/320 (5%)
Query: 19 SLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLASGSVP-DHRTCNVLL 77
S + P PSL++ S S+A F+ A+ +P D + N +L
Sbjct: 41 SAKLPQNTQAPREPSLRNPFK--------SPNLSDAKSLFNSIAATSRIPLDLKFHNSVL 92
Query: 78 ARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRP----CDAHRIFFDM 133
T L + ++ ++P F P + L+ C R P + HR+ M
Sbjct: 93 QSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHAC--RAPDSSISNVHRVLNLM 150
Query: 134 KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDL 193
N G P+ V+ + C G + +A+ + E+ E P++ TY+ L++ + + +DL
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL 210
Query: 194 EGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV 253
E + ++ + V+ + + +F L+D++C E + +L G +
Sbjct: 211 HVVYEFVDEMRDDFDVKPD----LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
+Y ++ C + + A + +MK+ G P + YN +I GL+K G
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 314 XXXXXXXCDHTYKVLVEALC 333
TY L+ +C
Sbjct: 327 VDAGYEPDTATYTSLMNGMC 346
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGK-FCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N+V+ + V++ +K+ Q +L + P +F ++S A D + HRV
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAP--DSSISNVHRV 146
Query: 455 ---MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
M NGL P VT + +R L + R ++A + + D+ TY +++ LC
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C + F ++ + + V + ++ +C S N EA + + +L ++G P+ F
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
YN ++ C L SEA + ++MK+ G+ PD +T+ L
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 324 TYKVLVEALCHVFD--VDKAREVLKLMLRKEGVDKTRIY-NIYLRAXXXXXXXXXXXXXX 380
T+ +L+ C D + VL LM+ G++ ++ +I +R+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMV-NNGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
+ E D T N ++ CK + + + +M PD+VSFT +I + +
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
+ + EA L + + G +P YN +++G L + ++A GVY M +G+ D
Sbjct: 243 SKNLREAMYLVSK-LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG 548
TY ++ GL ++EEA+ + ++ D Y +++ G+CR G
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M+ + D +T + + C+TG VDEA ++++ L K PD ++ ++ L
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE-LTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ ++ + + ++P +V++ LI + K +A + S + + G D Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
I++G C + EA + + D Y ++ GL ++G EA +L +VD
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 563 SGVSPNIFSYNILINCAC 580
+G P+ +Y L+N C
Sbjct: 329 AGYEPDTATYTSLMNGMC 346
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
Q + + +LC++ R EA S PD T N LL L + + + V
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 95 SLIVAKPGF--VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGY 152
+ + F P LV++ L+D C + +A + + N G P+ Y T++ G+
Sbjct: 219 EM---RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE 212
C++ +A V+ +M E GVEP+ +TY+ LI G+ + GR +++ + V+
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK-----AGRVEEARMYLKTMVDAG 330
Query: 213 SGVKVAAFANLVDSLCREG 231
A + +L++ +CR+G
Sbjct: 331 YEPDTATYTSLMNGMCRKG 349
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 444 VDEAFDLFHRVMP-ENGLRPCVVTYNALIRGLYKLKRPNDAFG----VYSSMVSDGIGAD 498
V++ LF ++ + RP T+ LI + + P+ + V + MV++G+ D
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVHRVLNLMVNNGLEPD 158
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
T I V LC+ +++EAK ++ D + Y +LK LC+ + H +Y
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL----HVVY 214
Query: 559 ELVDS-----GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHK 612
E VD V P++ S+ ILI+ C+ EA +V ++ G PDC + + K
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 142/376 (37%), Gaps = 90/376 (23%)
Query: 105 PSLVNYHR---LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
PSL N + L D +F RI D+K + +++ Y S+ + D
Sbjct: 54 PSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLK---------FHNSVLQSYGSIAVVNDT 104
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K+F +L+S +PN GR + F
Sbjct: 105 VKLFQHILKS--QPN----------------FRPGR--------------------STFL 126
Query: 222 NLVDSLCR--EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
L+ CR + + V R+ + G ++V + SLC+ GR A ++ E+
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH-TYKVLVEALCHVFDV 338
++ P YN+++ L K D Y+ D ++ +L++ +C+ ++
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
RE + L+ + + + + D NT+
Sbjct: 247 ---REAMYLVSK--------------------------------LGNAGFKPDCFLYNTI 271
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
+ GFC EA+ V + M + PD +++ T+I GL A RV+EA ++ + M +
Sbjct: 272 MKGFCTLSKGSEAVGVYKKM-KEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDA 329
Query: 459 GLRPCVVTYNALIRGL 474
G P TY +L+ G+
Sbjct: 330 GYEPDTATYTSLMNGM 345
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 403 CKTGSVDEALKVLQDMLMGKFCAPDVVS---FTTVISGLLDATRVDEAFDLFHRVMPENG 459
C+TG V EA +V+ M+ C+ VS ++ ++SG + +A DLF++ M + G
Sbjct: 223 CRTGCVSEAFQVVGLMI----CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNK-MIQIG 277
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
P +VTY +LI+G L ++AF V S + S+G+ D +++ + EEA+
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 520 SFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
+ + + D + +A+IL LC SG F+ + + G ++ + N+L NC
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCF 394
Query: 580 CHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+ S A +++ M DC T+ +
Sbjct: 395 SKIGYNSYALKVLSIMSYKDFALDCYTYTV 424
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 143/357 (40%), Gaps = 12/357 (3%)
Query: 62 LASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFR 121
+ G P+ +L R+ + + +V +I + G S+ + L+ F
Sbjct: 204 IGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS--GISVSVNVWSMLVSGFFRSG 261
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
P A +F M G PN+V+YT+LI G+ +G + +A V ++ G+ P+ + +
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
++I + E R++ L +R V + FA+++ SLC G F+ V RI
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ-----YTFASILSSLCLSGKFDLVPRITH 376
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
+ G+ + V + + K+G A +++ M + F Y + L + G
Sbjct: 377 GI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK-LMLRKEGVDKTRIY 360
+ H + ++++L + + A + K +L K +D Y
Sbjct: 434 APRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS-Y 492
Query: 361 NIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
+ ++ M E + T T+I+G CK ++ K+L++
Sbjct: 493 TVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 115/576 (19%), Positives = 199/576 (34%), Gaps = 158/576 (27%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD- 160
GFVP+ + +MD A IF ++ R N S+ ++ +CS GG GD
Sbjct: 138 GFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDL 193
Query: 161 --ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVA 218
+ V M+ G PN +ER
Sbjct: 194 VGVKIVLKRMIGEGFYPN------------RER--------------------------- 214
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEM 278
F ++ CR G +E F++ + C G V+ ++ + G A + +M
Sbjct: 215 -FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 279 KKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDV 338
+ G P+ V TY L++ + V
Sbjct: 274 IQIGCSPNLV-----------------------------------TYTSLIKGFVDLGMV 298
Query: 339 DKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTV 398
D+A VL ++ EG+ D++ N +
Sbjct: 299 DEAFTVLS-KVQSEGLA----------------------------------PDIVLCNLM 323
Query: 399 INGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPEN 458
I+ + + G +EA KV + K PD +F +++S L + + FDL R+
Sbjct: 324 IHTYTRLGRFEEARKVFTSLEKRKL-VPDQYTFASILSSLCLSGK----FDLVPRITHGI 378
Query: 459 GLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ---- 514
G +VT N L K+ + A V S M D TYT+ + LC
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 515 -------IEEAK---SFWHDVI---------WPSGIH------------DNFVYAAILKG 543
I+E K + +H I + + +H D Y +KG
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 544 LCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
L R+ EA ++ + G+ PN +Y +I+ C + +I+RE + G+ D
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Query: 604 CVTWRILHKIQGKVRKQTLSEYQSLSINYEGQDMDN 639
T ++ + + R SE++S+ ++ + +N
Sbjct: 559 PNTKFQVYSLLSRYRGD-FSEFRSVFEKWKSEFTEN 593
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/518 (20%), Positives = 207/518 (39%), Gaps = 72/518 (13%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLT--YSV 182
+A IF M NR ++VS+ +I+ Y G + A +VFDEM P +T Y+
Sbjct: 68 EAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQVFDEM------PVRVTTSYNA 117
Query: 183 LIRGVLQER-DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+I +++ + DL EL C + E+ +V ++A ++ R G F+E +
Sbjct: 118 MITAMIKNKCDLGKAYELFCDIPEKNAV---------SYATMITGFVRAGRFDEAEFLYA 168
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
E P + + V ++ + G+++ A R+ M + V + +HG K G
Sbjct: 169 ETPVK--FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM----VHGYCKMG 222
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK--TRI 359
+ T+ +++ + + L +R+EG K +
Sbjct: 223 RIVDARSLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLF-LRMRQEGDVKVNSNT 277
Query: 360 YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML 419
+ +A + D+ N++++ + K G + EA V
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF---- 333
Query: 420 MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP----------------ENGLRPC 463
G D VS+ ++I+GL+ ++ EA++LF + MP + + C
Sbjct: 334 -GVMKNKDSVSWNSLITGLVQRKQISEAYELFEK-MPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 464 V-----------VTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
V +T+ A+I +A + M+ + +S T++ ++
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+ E V+ + ++D V +++ C+ GN N+A Y++ PNI SY
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA----YKIFSCISEPNIVSY 507
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
N +I+ + +A ++ ++ +G P+ VT+ L
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
V K V L + L+ +C DA++IF + PN+VSY T+I+GY G
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGF 519
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
A K+F + SG EPN +T+ L+ + ++ G + + + S +E G
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM--KSSYNIEPGPD- 576
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL---CKVGRYHGAARI 274
+A +VD L R G ++ + +PC+ V+G ++ + +V AA+
Sbjct: 577 -HYACMVDLLGRSGLLDDASNLISTMPCK---PHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 275 VYEMKKRGFVPSDVLYN-YIIHGLTKDGD 302
+ E++ P VL Y I G +D D
Sbjct: 633 LIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+ ++ T+I GF + G DEA + L KF D V+ ++SG L A + +EA +
Sbjct: 143 NAVSYATMITGFVRAGRFDEA-EFLYAETPVKF--RDSVASNVLLSGYLRAGKWNEAVRV 199
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F + + VV+ ++++ G K+ R DA ++ M + T+T +++G
Sbjct: 200 FQGMAVKE-----VVSCSSMVHGYCKMGRIVDARSLFDRMTERNV----ITWTAMIDGYF 250
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSG-NFNEACHFLYELVDSGVSPNI 569
E+ + + + N A++ CR + E + + ++
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLS 629
F N L++ L EA + MK N D V+W L I G V+++ +SE L
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMK----NKDSVSWNSL--ITGLVQRKQISEAYELF 364
Query: 630 INYEGQDM 637
G+DM
Sbjct: 365 EKMPGKDM 372
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 14/291 (4%)
Query: 322 DHTYKVLVEALCHVFD-------VDKAREVLKLMLRKEGVDKT-RIYNIYLRAXXXXXXX 373
D + + E LC + + VD+A E+ + + G +T +YN L A
Sbjct: 139 DLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMF 198
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
M+ + D T ++NG+C G + EA + L +M F P
Sbjct: 199 HGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPP-ARGRDL 257
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+I GLL+A ++ A ++ + M + G P + T+N LI + K +Y +
Sbjct: 258 LIEGLLNAGYLESAKEMVSK-MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL 316
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF--VYAAILKGLCRSGNFN 551
G+ D TY ++ + +I+EA ++ + H F +YA I+KG+CR+G F+
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG--HKPFPSLYAPIIKGMCRNGMFD 374
Query: 552 EACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
+A F ++ PN Y +LI +A + EM + GL P
Sbjct: 375 DAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 7/316 (2%)
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y ++ SL +Y +I+ +MK S +II K+G + +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 315 XXXXXXCDHT---YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXX 371
C T Y L+ ALC V A +++ M+RK R Y I +
Sbjct: 174 KTLG--CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG 231
Query: 372 XXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSF 431
M + +I G G ++ A +++ M G F PD+ +F
Sbjct: 232 KMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF-VPDIQTF 290
Query: 432 TTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMV 491
+I + + V+ ++++ + GL + TY LI + K+ + ++AF + ++ V
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTAC-KLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV 349
Query: 492 SDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
DG + Y I++G+C ++A SF+ D+ + + VY ++ R G F
Sbjct: 350 EDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFV 409
Query: 552 EACHFLYELVDSGVSP 567
+A ++L E+ + G+ P
Sbjct: 410 DAANYLVEMTEMGLVP 425
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y+ L+ C + A+ + M +G P+ +Y L+NG+CS G + +A++ DEM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
G P + +LI G+L LE +E++ K+ + V + F L++++ +
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP-----DIQTFNILIEAISK 299
Query: 230 EG---FFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
G F E++ A C+ L ++ Y +I ++ K+G+ A R++ + G P
Sbjct: 300 SGEVEFCIEMYYTA----CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Query: 286 SDVLYNYIIHGLTKDG 301
LY II G+ ++G
Sbjct: 356 FPSLYAPIIKGMCRNG 371
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 89 TWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTL 148
+AL+R +I + G P Y L++ +C + +A +M RG P L
Sbjct: 201 AYALIRRMI--RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLL 258
Query: 149 INGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL---MCKLWE 205
I G + G + A+++ +M + G P+ T+++LI + + ++E E+ CKL
Sbjct: 259 IEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGL 318
Query: 206 RMSVE-------------------------VESGVKV--AAFANLVDSLCREGFFNEVFR 238
+ ++ VE G K + +A ++ +CR G F++ F
Sbjct: 319 CVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFS 378
Query: 239 IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLT 298
++ + VY +I + G++ AA + EM + G VP ++ + GL
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLK 438
Query: 299 KDG 301
G
Sbjct: 439 NGG 441
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 129/336 (38%), Gaps = 49/336 (14%)
Query: 175 PNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFN 234
P S+ Y L + + + E M K+ ++M ++ + +++ + G +
Sbjct: 109 PTSMEYEELAKSLASHKKYES----MWKILKQMK-DLSLDISGETLCFIIEQYGKNGHVD 163
Query: 235 EVFRIAEELP----CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
+ + +P CQ ++ VY ++ +LC V +HGA ++ M ++G P
Sbjct: 164 QAVELFNGVPKTLGCQQTVD---VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD---- 216
Query: 291 NYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLR 350
TY +LV C + +A+E L M R
Sbjct: 217 -------------------------------KRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 351 KEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDE 410
+ R ++ + M + D+ T N +I K+G V+
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNAL 470
+++ C D+ ++ T+I + ++DEAF L + + E+G +P Y +
Sbjct: 306 CIEMYYTACKLGLCV-DIDTYKTLIPAVSKIGKIDEAFRLLNNCV-EDGHKPFPSLYAPI 363
Query: 471 IRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
I+G+ + +DAF +S M + YT+++
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
VD+A +LF+ V G + V YN+L+ L +K + A+ + M+ G+ D TY
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
I+V G C +++EA+ F ++ +++GL +G A + ++
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMK----KNGLNPDCVTWRILHKIQGKVRK 619
G P+I ++NILI KS + EM K GL D T++ L K+ K
Sbjct: 282 GFVPDIQTFNILIEAIS----KSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 199/508 (39%), Gaps = 35/508 (6%)
Query: 126 AHRIFFDMKNRG-HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
A IF K++G + NV+ Y ++ + ++DEM+ G++P + TY LI
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 185 RGVLQERDLEGGRELMCKLW-ERMSV------EVESGVKVAAFANLVDSLCREGFFNEVF 237
+ +GG ++ W +MS EV +G+ + + + E FF
Sbjct: 230 -----DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFF---- 280
Query: 238 RIAEELPCQGSLAEEVV------YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
++ C + A+ V Y MID+ K G+ A+ M + G VP+ V +N
Sbjct: 281 ---KKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFN 337
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD-HTYKVLVEALCHVFDVDKAREVLKLMLR 350
+IH +G G D TY +L+ D+++A K M +
Sbjct: 338 TMIHIYGNNGQL--GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEM-K 394
Query: 351 KEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
+G+ + Y L A M + D T + + + + ++
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
++ + + + + ++ I + + EA +F N + V+ YN
Sbjct: 455 KSWSWFKRFHVAGNMSSE--GYSANIDAYGERGYLSEAERVFICCQEVN--KRTVIEYNV 510
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
+I+ K A ++ SM+S G+ D TY +V+ L D + + + +
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 530 GIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
+ D Y A++ + G N A E+V+ + P++ Y +LIN +A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 590 QIVREMKKNGLNPDCVTWRILHKIQGKV 617
V MK+ G+ + V + L K+ KV
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 113/570 (19%), Positives = 218/570 (38%), Gaps = 37/570 (6%)
Query: 46 CDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVP 105
CD N+ +++H C S T N ++ +S + + ++ + G VP
Sbjct: 285 CDENK-ADSHVCLS----------SYTYNTMIDTYGKSGQIKEASETFKRML--EEGIVP 331
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKV 164
+ V ++ ++ + + + + MK HC P+ +Y LI+ + I A
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMKL--HCAPDTRTYNILISLHTKNNDIERAGAY 389
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
F EM + G++P+ ++Y L+ +E L+ ++ + +VE++ + A V
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM-DDDNVEIDEYTQSALTRMYV 448
Query: 225 DSLCREGFFN--EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV---YEMK 279
++ E ++ + F +A + +G Y ID+ + G A R+ E+
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEG-------YSANIDAYGERGYLSEAERVFICCQEVN 501
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
KR + YN +I C + + TY LV+ L
Sbjct: 502 KRTVIE----YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
K R L+ M V Y + + M+E DV+ +I
Sbjct: 558 KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE-- 457
N F TG+V +A+ ++ M V+ + ++I +DEA ++ +++
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVI-YNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
P V T N +I + A ++ SM G A+ T+ +++ + EE
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEE 735
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
A + + D Y ++L G F EA E+V SG+ P+ ++ L
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGT 795
Query: 578 CACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
L + +A + + E++K + W
Sbjct: 796 ILMKLGMSKKAVRKIEEIRKKEIKRGLELW 825
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 120/579 (20%), Positives = 225/579 (38%), Gaps = 64/579 (11%)
Query: 82 RSRTPLQTW-------------ALVRSLIVA--KPGFVPSLVNYHRLMDQFCVFRRPCDA 126
R R L+ W L S++V+ GF P+++ Y+ L+ + + A
Sbjct: 309 RVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 127 HRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+F + N G P+ SY ++I G+ +A+ + E+ G +PNS LI
Sbjct: 369 QGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINL 428
Query: 187 VLQERDLEGGRELM-------CKLWERMSVEVESGVKVA--------------------- 218
+ D +G + + C+ + + +++ KV
Sbjct: 429 QAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQ 488
Query: 219 -AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+F++LV + + G ++ + E + S E +Y +I S + G+ A +I Y
Sbjct: 489 TSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKI-YN 547
Query: 278 MKKRGFVPSDVLYNYIIHGLTKD-----GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
K + SD N I D G+ + + ++V
Sbjct: 548 HK----MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMY 603
Query: 333 CHVFDVDKAREVLKLM-LRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRAD 391
+++A VL++M +K+ V ++ LR + +S +
Sbjct: 604 VKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWN 663
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT---RVDEAF 448
N VIN + +DE ++M+ F P+ V+F ++ A +V+E F
Sbjct: 664 QEMYNCVINCCARALPLDELSGTFEEMIRYGF-TPNTVTFNVLLDVYGKAKLFKKVNELF 722
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
L R +G+ V++YN +I K K + +M DG Y +++
Sbjct: 723 LLAKR----HGVVD-VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
Q+E+ +S + + D++ Y ++ G +E L EL +SG+ P+
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ SYN LI + EA +V+EM+ + PD VT+
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/508 (19%), Positives = 206/508 (40%), Gaps = 42/508 (8%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A I M+ G PN+++Y TLI GY + + A+ +F + G+EP+ +Y +I
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 186 GVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA--NLVDSLCREGFFNEVFRIAEEL 243
G + + E + +L G K +F L++ + G + + E++
Sbjct: 393 GWGRADNYEEAKHYYQEL-------KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGR-----------YHGAARIVYEMKKRGFVPSDVLYNY 292
G ++ G ++ + KVG+ +H R + + F S ++ Y
Sbjct: 446 TGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIR----LNQTSF--SSLVMAY 498
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKE 352
+ HG+ D C+ + H Y +L+ C + + + +K+ K
Sbjct: 499 VKHGMVDD--CLGLLREKKWRDSAFE---SHLYHLLI---CSCKESGQLTDAVKIYNHKM 550
Query: 353 GVDKT---RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
D+ I + + ++ S D I + V+ + K GS++
Sbjct: 551 ESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLE 610
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
EA VL+ M K PDV F ++ D+ L++R+ ++G+ YN
Sbjct: 611 EACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI-RKSGIHWNQEMYNC 669
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
+I + ++ G + M+ G ++ T+ ++++ ++ + +
Sbjct: 670 VINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRH 728
Query: 530 GIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAY 589
G+ D Y I+ ++ ++ + + G S ++ +YN L++ A D + E +
Sbjct: 729 GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD-AYGKDKQMEKF 787
Query: 590 Q-IVREMKKNGLNPDCVTWRILHKIQGK 616
+ I++ MKK+ PD T+ I+ I G+
Sbjct: 788 RSILKRMKKSTSGPDHYTYNIMINIYGE 815
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 138/330 (41%), Gaps = 14/330 (4%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLES- 171
++D + V +A +++ ++K+ G + + ++ ++ Y G + +A V + M E
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 172 GVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV-AAFANLVDSLCRE 230
+ P+ + ++R + Q+ DL+ + + L+ R+ +SG+ N V + C
Sbjct: 624 DIVPDVYLFRDMLR-IYQKCDLQ---DKLQHLYYRIR---KSGIHWNQEMYNCVINCCAR 676
Query: 231 GF-FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
+E+ EE+ G V + ++D K + + K+ G V DV+
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV--DVI 734
Query: 290 -YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM 348
YN II K+ D Y L++A ++K R +LK M
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRM 794
Query: 349 LRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV 408
+ YNI + + ES D+ + NT+I + G V
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
+EA+ ++++M G+ PD V++T +++ L
Sbjct: 855 EEAVGLVKEM-RGRNIIPDKVTYTNLVTAL 883
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/513 (19%), Positives = 201/513 (39%), Gaps = 51/513 (9%)
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
+ T+I G + A K F MLE GV PN T +L+ G+ Q+ E
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM-GLYQKNWNVEEAEFAFSHM 271
Query: 205 ERMSVEVESGVKVAAFANLVDSLCREGFFN---EVFRIAEELPCQGSLAEEVVYGQMIDS 261
+ + ES A+++++ R ++ EV + ++ + L +V M+++
Sbjct: 272 RKFGIVCES-----AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV---MLNA 323
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
+ G+ A I+ M+ GF P+ + YN +I G K M Q
Sbjct: 324 YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFK-MEAAQGLFHRLCNIGLEP 382
Query: 322 DHT-YKVLVEALCHVFDVDKAREVLKLMLR----------------------KEGVDKT- 357
D T Y+ ++E + ++A+ + + R ++G KT
Sbjct: 383 DETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTI 442
Query: 358 -----------RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
I I L+A + R + + ++++ + K G
Sbjct: 443 EDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
VD+ L +L++ + A + + +I ++ ++ +A +++ M + +T
Sbjct: 503 MVDDCLGLLREK-KWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
+ +I + ++A +Y ++ S G+ D ++I+V +EEA S +
Sbjct: 562 -STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMD 620
Query: 527 WPSGI-HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLK 585
I D +++ +L+ + ++ H Y + SG+ N YN +INC
Sbjct: 621 EQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPL 680
Query: 586 SEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
E EM + G P+ VT+ +L + GK +
Sbjct: 681 DELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 164/412 (39%), Gaps = 54/412 (13%)
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
+ P T+++L+ +D+EG R ++ R+ E + L+ S + G
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVL-----RLVQESGMTADCKLYTTLISSCAKSGK 517
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNY 292
+ +F + ++ G A +G +ID + G+ A ++ + P V++N
Sbjct: 518 VDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 293 IIHGLTKDGDCMRGYQXXXXXXXXXX-XXCDH-TYKVLVEALCHVFDVDKAREVLKLMLR 350
+I + G R + DH + L++A C+ V++A+EV + M+
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ-MIH 636
Query: 351 KEGVDKT-RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVD 409
K G+ T +Y I +N K+G D
Sbjct: 637 KYGIRGTPEVYTI-----------------------------------AVNSCSKSGDWD 661
Query: 410 EALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNA 469
A + +DM K PD V F+ +I A +DEAF + + G+R ++Y++
Sbjct: 662 FACSIYKDM-KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ-GIRLGTISYSS 719
Query: 470 LIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPS 529
L+ K A +Y + S + +T ++ LC+ +Q+ +A + D I
Sbjct: 720 LMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYL-DEIKTL 778
Query: 530 GIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCAC 580
G+ N + Y+ ++ R +F + L + GVSPN LI C C
Sbjct: 779 GLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN------LIMCRC 824
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
ES AD T+I+ K+G VD +V M A ++ +F +I G A +V
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA-NLHTFGALIDGCARAGQV 553
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG--IGADSTTY 502
+AF + + +N ++P V +NALI + + AF V + M ++ I D +
Sbjct: 554 AKAFGAYGILRSKN-VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELV 561
+++ C+ Q+E AK + +I GI VY + +SG+++ AC ++
Sbjct: 613 GALMKACCNAGQVERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMK 671
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ V+P+ ++ LI+ A H + EA+ I+++ K G+ +++ L
Sbjct: 672 EKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 143/356 (40%), Gaps = 9/356 (2%)
Query: 258 MIDSLCKVGR-YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
M+ S+C + GA ++ +++ G LY +I K G ++
Sbjct: 472 MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNS 531
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXX 375
HT+ L++ V KA + LR + V R+ +N + A
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGI-LRSKNVKPDRVVFNALISACGQSGAVDR 590
Query: 376 XXXXXXSMLESQ--CRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVVSFT 432
M D I++ ++ C G V+ A +V Q + G P+V +T
Sbjct: 591 AFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV--YT 648
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
++ + D A ++ + M E + P V ++ALI K ++AFG+ S
Sbjct: 649 IAVNSCSKSGDWDFACSIY-KDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKS 707
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNE 552
GI + +Y+ ++ C+ ++A + + A++ LC +
Sbjct: 708 QGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPK 767
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
A +L E+ G+ PN +Y++L+ + D +++++ + K +G++P+ + R
Sbjct: 768 AMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCR 823
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 131/326 (40%), Gaps = 7/326 (2%)
Query: 256 GQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL-YNYIIHGLTKDGDCMRGYQXXXXXX 314
+++ L K G+Y+ A EM+K V +D + N ++ L K+ ++
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
T+ +L+ C D AR ++ LM E Y ++ A
Sbjct: 267 DTIKPDA-RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
M E+ C +V+T V++ K+ V EAL V + M C PD ++++
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM-KEDGCVPDAKFYSSL 384
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD- 493
I L R +A ++F M G+R V+ YN +I R A + M +
Sbjct: 385 IHILSKTGRFKDAAEIFED-MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 494 --GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFN 551
+ TY +++ C +++ H ++ D Y +++GLC SG
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 552 EACHFLYELVDSGVSPNIFSYNILIN 577
EAC F E V G+ P + +L++
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 156/369 (42%), Gaps = 11/369 (2%)
Query: 48 SNRFSEAHQCFSISLA-SGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPS 106
SN +++A+ F + + +G V T N ++ L + R W LV + + + +
Sbjct: 143 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 202
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDM-KNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
L ++M + + A F +M K+ G + ++ +L++ I A +VF
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
++ ++ ++P++ T+++LI G + R + R +M + M V E V + + V+
Sbjct: 263 LKLFDT-IKPDARTFNILIHGFCKARKFDDARAMM----DLMKV-TEFTPDVVTYTSFVE 316
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
+ C+EG F V + EE+ G V Y ++ SL K + A + +MK+ G VP
Sbjct: 317 AYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVP 376
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
Y+ +IH L+K G + Y ++ A H + A +L
Sbjct: 377 DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Query: 346 KLMLRKEGVD---KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGF 402
K M +EG Y L+ M+++ DV T +I G
Sbjct: 437 KRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGL 496
Query: 403 CKTGSVDEA 411
C +G V+EA
Sbjct: 497 CMSGKVEEA 505
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ D I +N++++ K S++ A +V + PD +F +I G A + D+A
Sbjct: 236 KTDTIAMNSLMDALVKENSIEHAHEVFLKLF--DTIKPDARTFNILIHGFCKARKFDDAR 293
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYK---LKRPNDAFGVYSSMVSDGIGADSTTYTII 505
+ +M P VVTY + + K +R N+ + M +G + TYTI+
Sbjct: 294 AMMD-LMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE---MLEEMRENGCNPNVVTYTIV 349
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
+ L Q+ EA + + + D Y++++ L ++G F +A ++ + GV
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMK 596
++ YN +I+ A H A ++++ M+
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRME 440
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 181/483 (37%), Gaps = 48/483 (9%)
Query: 138 HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGR 197
+ P+V +Y ++ A +FDEM + + P+ TYS LI +E G
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKE----GMF 206
Query: 198 ELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQ 257
+ ++M + SG + ++NL++ R +++ I L G + V Y
Sbjct: 207 DSALSWLQKMEQDRVSG-DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS 265
Query: 258 MIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXX 317
MI+ K + A ++ EM + G +P+ V Y+ ++ ++ +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 318 XXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXX 376
T ++++ + D+ K + L LRK ++ + YN LR
Sbjct: 326 CALDLTTCNIMIDVYGQL-DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEA 384
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
M +V+T NT+I + KT ++A ++Q+M + P+ ++++T+IS
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM-QSRGIEPNAITYSTIIS 443
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG 496
A ++D A LF + + S G+
Sbjct: 444 IWGKAGKLDRAATLFQK------------------------------------LRSSGVE 467
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
D Y ++ + AK H++ P DN + L ++G EA
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWV 523
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
+ +SG +I + +IN ++ +M+ G PD ++ GK
Sbjct: 524 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
Query: 617 VRK 619
R+
Sbjct: 584 QRE 586
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 143/368 (38%), Gaps = 23/368 (6%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ + G P LV Y+ +++ + + +A + +M G PN VSY+TL++ Y
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+A VF EM E + T +++I Q L+ +E W +++E V
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQ---LDMVKEADRLFWSLRKMDIEPN--V 365
Query: 218 AAFANLVDSLCREGFFNE---VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
++ ++ F E +FR+ + + ++ V Y MI K + A +
Sbjct: 366 VSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV---VTYNTMIKIYGKTMEHEKATNL 422
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
V EM+ RG P+ + Y+ II K G R Y+ ++ A
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
V + A+ +L + + + + I +A ES D+
Sbjct: 483 VGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA----FESGEVKDISV 538
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA---TRVDEAFDLF 451
+IN + + ++V + M + PD + VI+ +L+A R E D
Sbjct: 539 FGCMINLYSRNQRYVNVIEVFEKMRTAGYF-PD----SNVIAMVLNAYGKQREFEKADTV 593
Query: 452 HRVMPENG 459
+R M E G
Sbjct: 594 YREMQEEG 601
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S +T L ++++F EA F+ D TCN+++
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI------------------- 337
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
D + +A R+F+ ++ PNVVSY T++ Y
Sbjct: 338 ------------------DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
G+A +F M +E N +TY+ +I+ + + E L+ ++ R G++
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR-------GIE 432
Query: 217 VAA--FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
A ++ ++ + G + + ++L G ++V+Y MI + +VG A R+
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 275 VYEMKKRGFVPSDV 288
++E+K +P +
Sbjct: 493 LHELKLPDNIPRET 506
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 13/244 (5%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ +N ++NG+C G+V EA + +D++ K C PDVVS+ T+I+ L ++ +A +L
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASK-CRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+ R M + P V N +I L KR +A V+ + G + TY +++ LC
Sbjct: 305 Y-RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC 363
Query: 511 DCDQIEEAKSFWHDVIWPSGI--HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
+ E+ ++ G ++ ++ +LK RS + + L + +
Sbjct: 364 KIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV---LERMAKNKCEMT 420
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI----LHKIQGKVRKQTLSE 624
YN++ D + + +I EM+++GL PD T+ I LH +GK+ + LS
Sbjct: 421 SDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLH-TKGKI-GEALSY 478
Query: 625 YQSL 628
+Q +
Sbjct: 479 FQEM 482
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 146/388 (37%), Gaps = 49/388 (12%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L L RF E HQ F + +T VLL R + + + +
Sbjct: 150 LDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR--KEF 207
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G LV +H L+ C ++ A +F + C ++ + ++NG+C +G + +A
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVHEA 266
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++ + +++ S P+ ++Y +I + ++ L EL +W + V
Sbjct: 267 KRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW-----DTRRNPDVKICN 321
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
N++D+LC + E + E+ +G V Y ++ LCK+ R +V EM+ +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 282 GF--VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
G P+DV ++Y++ + D D+
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKDV---------------------------------DI- 407
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
VL+ M + + + +YN+ R M S D T I
Sbjct: 408 ----VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRI 463
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPD 427
+G G + EAL Q+M M K P+
Sbjct: 464 HGLHTKGKIGEALSYFQEM-MSKGMVPE 490
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 139/357 (38%), Gaps = 45/357 (12%)
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR-GFVPS---DVLYNYIIHGLTKDGDCM 304
L+ ++Y +++D L K+ R+ ++ EM KR GFV +VL N D + +
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVD-EAV 198
Query: 305 RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
++ H L+ LC V+ A + R+ G D + N+ L
Sbjct: 199 GVFERRKEFGIDDDLVAFHG---LLMWLCRYKHVEFAETLFCSRRREFGCD-IKAMNMIL 254
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
++ S+CR DV++ T+IN K G + +A+++ + M +
Sbjct: 255 NGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR-R 313
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKR----- 479
PDV VI L R+ EA ++F R + E G P VVTYN+L++ L K++R
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVF-REISEKGPDPNVVTYNSLLKHLCKIRRTEKVW 372
Query: 480 --------------PNDAFGVY---------------SSMVSDGIGADSTTYTIIVEGLC 510
PND Y M + S Y ++
Sbjct: 373 ELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYV 432
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
D+ E+ + W ++ D Y + GL G EA + E++ G+ P
Sbjct: 433 QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ +++ A +VDEA +F R E G+ +V ++ L+ L + K A ++ S
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFER-RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS 238
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGN 549
+ G D +I+ G C + EAK FW D+I D Y ++ L + G
Sbjct: 239 RRRE-FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGK 297
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
+A + D+ +P++ N +I+ C EA ++ RE+ + G +P+ VT+
Sbjct: 298 LGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNS 357
Query: 610 LHKIQGKVRK 619
L K K+R+
Sbjct: 358 LLKHLCKIRR 367
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 156/392 (39%), Gaps = 11/392 (2%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T ++L + R+R+ + ++ L+V + + S + Y+ ++D RR + H++F
Sbjct: 108 TEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFD 167
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
+M R N +Y L+N Y + + +A VF+ E G++ + + + L+ + + +
Sbjct: 168 EMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYK 227
Query: 192 DLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAE 251
+E L C S E G + A +++ C G +E R +++ +
Sbjct: 228 HVEFAETLFC------SRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPD 281
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
V YG MI++L K G+ A + M P + N +I L +
Sbjct: 282 VVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFR 341
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV-DKTRIYNIYLRAXXXX 370
TY L++ LC + +K E+++ M K G + YL
Sbjct: 342 EISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYL--LKYS 399
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVS 430
M +++C N + + + ++ ++ +M PD +
Sbjct: 400 QRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL-GPDQRT 458
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
+T I GL ++ EA F +M + G+ P
Sbjct: 459 YTIRIHGLHTKGKIGEALSYFQEMMSK-GMVP 489
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 153/380 (40%), Gaps = 54/380 (14%)
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+ S R G NE R+ + +P S V Y MI + G + A ++ EM +R
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSS----VSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKARE 343
V +N +I G ++ + G C ++ ++ VD AR
Sbjct: 127 VS----WNVMIKGYVRNRNL--GKARELFEIMPERDVC--SWNTMLSGYAQNGCVDDARS 178
Query: 344 VLKLMLRKEGVDKTRIYNIYLRAXXXXXX-----------------------XXXXXXXX 380
V M K V + + Y++
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
+S DV++ NT+I G+ ++G +DEA ++ + + DV ++T ++SG +
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV-----QDVFTWTAMVSGYIQ 293
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
V+EA +LF + MPE V++NA++ G + +R A ++ M + +
Sbjct: 294 NRMVEEARELFDK-MPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----S 344
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
T+ ++ G C +I EAK+ + + P D +AA++ G +SG+ EA ++
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKM--PK--RDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 561 VDSGVSPNIFSY-NILINCA 579
G N S+ + L CA
Sbjct: 401 EREGGRLNRSSFSSALSTCA 420
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 173/442 (39%), Gaps = 79/442 (17%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
+LV+++ L+ F ++ +A R FFD N +VVS+ T+I GY G I +AR++F
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEA-RQFFDSMN---VRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
D ES V+ + T++ ++ G +Q R +E REL K+ ER V A A V
Sbjct: 274 D---ESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN-----AMLAGYVQ 324
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
R E+F + +PC+ + MI + G+ A + +M KR
Sbjct: 325 GE-RMEMAKELFDV---MPCRNV----STWNTMITGYAQCGKISEAKNLFDKMPKR---- 372
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
V + +I G ++ G H+++ L +
Sbjct: 373 DPVSWAAMIAGYSQSG---------------------HSFEAL--------------RLF 397
Query: 346 KLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKT 405
M R+ G ++ L +++ N ++ +CK
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 406 GSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVV 465
GS++EA + ++M D+VS+ T+I+G + A F M GL+P
Sbjct: 458 GSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVALRFFES-MKREGLKPDDA 511
Query: 466 TYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGLCDCDQIEEA------ 518
T A++ + + +M D G+ +S Y +V+ L +E+A
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 519 ------KSFWHDVIWPSGIHDN 534
+ W ++ S +H N
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGN 593
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/482 (18%), Positives = 184/482 (38%), Gaps = 62/482 (12%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGV---EPNSLTYSVLIRGVLQERDLEGG 196
PN+ S+ I G+ ++ ++ +ML G P+ TY VL + R G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYG 256
++ + ++ +E+ S V A+ + G ++ +E P + + V +
Sbjct: 176 HMILGHVL-KLRLELVSHVHNAS----IHMFASCGDMENARKVFDESPVR----DLVSWN 226
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXX 316
+I+ K+G A + M+ G P DV ++ + GD RG +
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 317 XXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXX 376
L++ D+ +AR + + ++
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT------------------------ 322
Query: 377 XXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVIS 436
+++ T+I+G+ + G +D + K+ DM DVV + +I
Sbjct: 323 ---------------IVSWTTMISGYARCGLLDVSRKLFDDME-----EKDVVLWNAMIG 362
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG 496
G + A R +A LF + N +P +T + +L + ++ + +
Sbjct: 363 GSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS 421
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
+ T +V+ C I EA S +H + ++ Y AI+ GL G+ + A +
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGI----QTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 557 LYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKN-GLNPDCVTWRILHKIQG 615
E++D+G++P+ ++ L++ CH + +MK LNP + I+ + G
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLG 537
Query: 616 KV 617
+
Sbjct: 538 RA 539
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
L+D + +A +F ++ R N ++YT +I G G A F+EM+++G
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
+ P+ +T+ L+ ++ GR+ ++ R ++ + + ++ +VD L R G
Sbjct: 486 IAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQ----LKHYSIMVDLLGRAGL 541
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMI 259
E R+ E +P + A+ V+G ++
Sbjct: 542 LEEADRLMESMPME---ADAAVWGALL 565
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
E C +V + N ++ +C G + EA KV ++M + + D+V++ T+I GL V
Sbjct: 274 EVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKV-RGVVYDIVAYNTMIGGLCSNFEV 332
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
+A +LF R M G+ +TY L+ G K + VY M G AD T
Sbjct: 333 VKAKELF-RDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEA 391
Query: 505 IVEGLC---DCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYEL 560
+VEGLC D ++ EA D + + + Y ++K LC G + A + E+
Sbjct: 392 LVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
Query: 561 VDSGVSPNIFSYNILIN 577
V G P+ +Y I+
Sbjct: 452 VGKGFKPSQETYRAFID 468
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P++ +Y+ LM+ +C +A +++ +MK RG ++V+Y T+I G CS + A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG----RELMCKLWERMSVEVES---- 213
+++F +M G+E LTY L+ G + D++ G RE+ K +E + +E+
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 214 ------GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
G +V A++V RE F P + Y ++ LC+ G+
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMF---------YPSRN------CYELLVKRLCEDGK 440
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
A I EM +GF PS Y I G GD
Sbjct: 441 MDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 186/517 (35%), Gaps = 123/517 (23%)
Query: 7 LISLKPKPFIPFSLRFSTTIATPSSP--SLQHSIATTLHALCDSNRFSEAHQCFSISLAS 64
L SL+P F P T+ ++P SL+ + T ++LC +H
Sbjct: 61 LRSLQPSGFTPSQFS-EITLCLRNNPHLSLRFFLFTRRYSLC-------SH--------- 103
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
D +C+ L+ L RSR ++R + + + R++ F
Sbjct: 104 ----DTHSCSTLIHILSRSRLKSHASEIIRLAL----RLAATDEDEDRVLKVF------- 148
Query: 125 DAHRIFFDMKNR-GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
R NR G P V + LI I A V ++ G+ T + L
Sbjct: 149 ---RSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNAL 203
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKV--------AAFANLVDSLCREGFFNE 235
I V + R G ++ +++ V V+ K+ F +++ S REG
Sbjct: 204 ITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEM 263
Query: 236 VFRIAEELPCQGSLAEEVV-YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
V RI E+ + + V Y ++++ C G A ++ EMK RG V V YN +I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGV 354
G LC F+V KA+E+ + M K
Sbjct: 324 GG-----------------------------------LCSNFEVVKAKELFRDMGLKG-- 346
Query: 355 DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
+E C +T ++NG+CK G VD L V
Sbjct: 347 -----------------------------IECTC----LTYEHLVNGYCKAGDVDSGLVV 373
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLD---ATRVDEAFDLFHRVMPENGLRPCVVTYNALI 471
++M F A D ++ ++ GL D RV EA D+ + E P Y L+
Sbjct: 374 YREMKRKGFEA-DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLV 432
Query: 472 RGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+ L + + + A + + MV G TY ++G
Sbjct: 433 KRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 187/494 (37%), Gaps = 106/494 (21%)
Query: 11 KPKPFIPFSLRFSTTIA----TPSSPSLQHSIA-----------TTLHALCDS----NRF 51
KPKP S+ TT++ PS P + +++ +TL +L S ++F
Sbjct: 15 KPKPDAILSISLLTTVSSPPSPPSDPLISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQF 74
Query: 52 SEAHQCFS----ISLA--------SGSVPDHRTCNVLLARLLRSRTPLQTWALVR-SLIV 98
SE C +SL S D +C+ L+ L RSR ++R +L +
Sbjct: 75 SEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRL 134
Query: 99 AKPG---------FVPSLVNYHR---------LMDQFCVFRRPCD-AHRIFFDMKNRGHC 139
A F + +Y+R L+ + C+ + D A + +++RG
Sbjct: 135 AATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGIN 194
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEM-------------LESGVEPNSLTYSVLIRG 186
+ + LI G + K++ E+ + ++PN+ T++ ++
Sbjct: 195 AQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVS 254
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+ EG E++ ++W M EV V ++ L+++ C G +E ++ EE+ +
Sbjct: 255 FYR----EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVR 310
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G + + V Y MI LC A + +M +G + + Y ++++G K GD G
Sbjct: 311 GVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSG 370
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIY---NIY 363
T + LVE LC D D R V + K+ V + Y N Y
Sbjct: 371 LVVYREMKRKGFEADGLTIEALVEGLCD--DRDGQRVVEAADIVKDAVREAMFYPSRNCY 428
Query: 364 LRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF 423
++ C+ G +D AL + +M+ GK
Sbjct: 429 --------------------------------ELLVKRLCEDGKMDRALNIQAEMV-GKG 455
Query: 424 CAPDVVSFTTVISG 437
P ++ I G
Sbjct: 456 FKPSQETYRAFIDG 469
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGA 497
LD VDEA + ++ +P T+N+++ Y+ ++ M + G
Sbjct: 226 LDDVSVDEAKKMIGKI------KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSP 279
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFL 557
+ +Y +++E C + EA+ W ++ ++D Y ++ GLC + +A
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 558 YELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++ G+ +Y L+N C + REMK+ G D +T L
Sbjct: 340 RDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 409 DEALKVLQDMLMG-KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTY 467
D LKV + ++ C F +I LD+ +D A + R + G+ + T
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAV-MVMRKLRSRGINAQISTC 200
Query: 468 NALI------RGL---YKLKRPNDAFGVYSSMVSDG------IGADSTTYTIIVEGLCDC 512
NALI RG YK+ R + FG+ V + I ++TT+ ++
Sbjct: 201 NALITEVSRRRGASNGYKMYR--EVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYRE 258
Query: 513 DQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+ E + W ++ G N + Y +++ C G +EA E+ GV +I +
Sbjct: 259 GETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVA 318
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQG 615
YN +I C +A ++ R+M G+ C+T+ H + G
Sbjct: 319 YNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE--HLVNG 360
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M E C+ ++ N ++N + D + +++ PDV S+ T+I GL
Sbjct: 131 EMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGK 190
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
EA L + GL+P +T+N L+ Y + + +++ MV + D +
Sbjct: 191 GSFTEAVALIDEI-ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRS 249
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
Y + GL ++ EE S + + D F + A++KG G +EA + E+
Sbjct: 250 YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIE 309
Query: 562 DSGVSPNIFSYNILINCACHL-DLKSEAYQIVREM 595
+G P F +N L+ C DL+S AY++ +E+
Sbjct: 310 KNGCRPLKFVFNSLLPAICKAGDLES-AYELCKEI 343
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+IN + + G + A KV +M + C +SF +++ +++ + D +F + +
Sbjct: 112 IINLYGRVGMFENAQKVFDEM-PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK 170
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+ P V +YN LI+GL +A + + + G+ D T+ I++ + EE
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 518 AKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN 577
+ W ++ + D Y A L GL E +L + + P++F++ +I
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 578 CACHLDLKSEAYQIVREMKKNGLNP 602
EA +E++KNG P
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRP 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P+V SY TLI G C G +A + DE+ G++P+ +T+++L+ + E G +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ- 233
Query: 200 MCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQ 257
+W RM VE VK + ++ + L E E+ + ++L + +
Sbjct: 234 ---IWARM---VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTA 287
Query: 258 MIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXX 317
MI G+ A E++K G P ++N ++ + K GD Y+
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKR 347
Query: 318 XXXCDHTYKVLVEALCHVFDVDKAREVLKL 347
+ + +V+AL D+A E+++L
Sbjct: 348 LLVDEAVLQEVVDALVKGSKQDEAEEIVEL 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 126/307 (41%), Gaps = 7/307 (2%)
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
+A + V L F V I EE ++++E ++I+ +VG + A ++
Sbjct: 71 IAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFD 130
Query: 277 EMKKRGFVPSDVLYNYIIHGL--TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
EM +R + + +N +++ +K D + G +Y L++ LC
Sbjct: 131 EMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV-ASYNTLIKGLCG 189
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+A ++ + K G+ I +NI L M+E + D+
Sbjct: 190 KGSFTEAVALIDEIENK-GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
+ N + G +E + + D L G PDV +FT +I G + ++DEA +++
Sbjct: 249 SYNARLLGLAMENKSEEMVSLF-DKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT-WYK 306
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ +NG RP +N+L+ + K A+ + + + + D +V+ L
Sbjct: 307 EIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGS 366
Query: 514 QIEEAKS 520
+ +EA+
Sbjct: 367 KQDEAEE 373
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/303 (17%), Positives = 119/303 (39%), Gaps = 40/303 (13%)
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
+IN Y VG +A+KVFDEM E + +L+++ L+ + + + + +L ++
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
S+E + VA++ L+ LC +G F E + +E+ +G + + + ++ G+
Sbjct: 172 SIEPD----VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK 227
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
+ +I M ++ YN + GL +
Sbjct: 228 FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS------------------------ 263
Query: 328 LVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
E + +FD K E+ + + ++ + ++
Sbjct: 264 --EEMVSLFDKLKGNELKPDVF---------TFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
CR N+++ CK G ++ A ++ +++ + + V V+ L+ ++ DEA
Sbjct: 313 CRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV-LQEVVDALVKGSKQDEA 371
Query: 448 FDL 450
++
Sbjct: 372 EEI 374
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 88 QTWALVRSLIVAKPGFV---PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVS 144
+ + LV + PG + P + +Y+ L+ C +A + +++N+G P+ ++
Sbjct: 155 KKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHIT 214
Query: 145 YTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW 204
+ L++ + G + +++ M+E V+ + +Y+ + G+ +E E M L+
Sbjct: 215 FNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA----MENKSEEMVSLF 270
Query: 205 ERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCK 264
+++ E V F ++ EG +E +E+ G + V+ ++ ++CK
Sbjct: 271 DKLKGN-ELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICK 329
Query: 265 VGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTK 299
G A + E+ + + + + ++ L K
Sbjct: 330 AGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 16/219 (7%)
Query: 29 PSSPSLQHSIA---TTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLL---R 82
P S++ +A T + LC F+EA G PDH T N+LL +
Sbjct: 168 PGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK 227
Query: 83 SRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNV 142
Q WA + V + + +Y+ + + + + +F +K P+V
Sbjct: 228 FEEGEQIWARMVEKNVKR-----DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 143 VSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCK 202
++T +I G+ S G + +A + E+ ++G P ++ L+ + + DLE EL +
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 203 LWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
++ + + V A +VD+L + +E I E
Sbjct: 343 IFAKRLL-----VDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 170/431 (39%), Gaps = 29/431 (6%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P+L Y+ L+ F +A +I DM+ G PN+V+Y TL+ Y G A +
Sbjct: 185 PNLFIYNSLLGAMRGF---GEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGI 241
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMS-------VEVESGVKV 217
D E G EPN +TYS + + D G E +L E+ + V + +
Sbjct: 242 LDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEF 301
Query: 218 AAFANLVDSLCRE----------GFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
N + +C + + V ++ + G + ++I + +
Sbjct: 302 VKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEH 361
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKV 327
Y + +++R S + N++I + K + + +Y++
Sbjct: 362 YIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYEL 421
Query: 328 LVEALCHVFDVDKAREVLKLMLR------KEGVD-KTRIYNIYLRAXXXXXXXXXXXXXX 380
+V + R + + +R +G+ + R +N L A
Sbjct: 422 VVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIF 481
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
+M+++ + VI+ +++ K DEA +V M+ P++ ++TT+ S L
Sbjct: 482 KAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGI-EPNLYAYTTMASVLTG 540
Query: 441 ATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
+ + D + M G+ P VVT+NA+I G + A+ + M S+ + +
Sbjct: 541 QQKFN-LLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEI 599
Query: 501 TYTIIVEGLCD 511
TY +++E L +
Sbjct: 600 TYEMLIEALAN 610
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
Query: 411 ALKVLQDMLMGKFCAPDVVSFTTVISG---LLDATRVDEAFDLFHRV---MPENGLRPCV 464
AL++ +D+L + P+ +S+ V+S LL A + R+ M + GL+P
Sbjct: 400 ALEIYEDLL-DEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 465 VTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHD 524
+NA++ K A ++ +MV +G +Y ++ L +EA W+
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 525 VIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLD 583
+I GI N + Y + L FN L E+ G+ P++ ++N +I+
Sbjct: 519 MI-KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG 577
Query: 584 LKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLSINYEGQDMDNK 640
L AY+ MK + P+ +T+ +L + K L+ + EG + +K
Sbjct: 578 LSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSK 634
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 4/207 (1%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N +++ K G +++L M K P + V+ A+ A +F +
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKM-EDKGLKPQRRHWNAVLVACSKASETTAAIQIF-KA 483
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
M +NG +P V++Y AL+ L K K ++AF V++ M+ GI + YT + L +
Sbjct: 484 MVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQK 543
Query: 515 IEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ ++ GI + V + A++ G R+G A + + + V PN +Y
Sbjct: 544 FNLLDTLLKEMA-SKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 574 ILINCACHLDLKSEAYQIVREMKKNGL 600
+LI + AY++ + + GL
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGL 629
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 185/458 (40%), Gaps = 38/458 (8%)
Query: 45 LCDSNRFSEA----------HQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
LC +NRF EA + + + P CN L ++ L+ V
Sbjct: 51 LCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCN--LIQVCSQTRALEEGKKVH 108
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
I GFVP +V ++RL+ + DA ++F +M NR C S+ ++NGY
Sbjct: 109 EHIRTS-GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC----SWNVMVNGYAE 163
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES- 213
VG + +ARK+FDEM E +S +++ ++ G +++ E ++ L +R+ +
Sbjct: 164 VGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEAL-VLYSLMQRVPNSRPNI 218
Query: 214 -GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
V +A A R G I + G ++EV++ ++D K G A
Sbjct: 219 FTVSIAVAAAAAVKCIRRGK-----EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 273
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
I ++ ++ V + +I K G+ ++T+ ++ A
Sbjct: 274 NIFDKIVEKDVVS----WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
+ + ++V M R G D Y+ + +++ + D+
Sbjct: 330 ADLTTEELGKQVHGYMTRV-GFDP---YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
++ ++I G + G DEALK D+L+ PD V+F V+S A V++ + F+
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ ++ L Y L+ L + R V S M
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ + N ++NG+ + G ++EA K+ +M D S+T +++G + + +EA L
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEM-----TEKDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+ + RP + T + + +K ++ +V G+ +D ++ +++
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C I+EA++ + ++ D + +++ +S + E ELV S PN +
Sbjct: 265 KCGCIDEARNIFDKIV----EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
++ ++N L + Q+ M + G +P
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
++E CRA+ I+ C + EA++ L+G+ P ++ +I + T
Sbjct: 47 VVERLCRAN--RFGEAIDVLCGQKLLREAVQ-----LLGRAKKPPASTYCNLIQ-VCSQT 98
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
R E H + +G P +V +N L+R K DA V+ M + D ++
Sbjct: 99 RALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN----RDLCSW 154
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
++V G + +EEA+ + ++ D++ + A++ G + EA LY L+
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMT----EKDSYSWTAMVTGYVKKDQPEEAL-VLYSLMQ 209
Query: 563 --SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGK 616
PNIF+ +I + A + +I + + GL+ D V W L + GK
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P++VS+T+LI G G +A K FD +L+SG +P+ +T+ ++ +E G E
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 200 MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
+ E+ + S + LVD L R G F ++ + E+P + S
Sbjct: 443 FYSITEKHRLSHTSD----HYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 389 RADVITL---NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVD 445
RA +I+L N +I+ + K + +A++V G+ D VS+ ++ISGL+ R
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVF-----GELEKKDKVSWNSMISGLVHCERSK 287
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
EA DLF + +G++P +++ L + V+ +++ GI D+ T I
Sbjct: 288 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 347
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDN--FVYAAILKGLCRSGNFNEACHFLYELVDS 563
V+ C IE A ++ GI F + A+L GL G+ E+ + E+V
Sbjct: 348 VDMYAKCGYIETALEIFN------GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLN 601
G PN+ ++ +N CH L E + +MK N
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 115/552 (20%), Positives = 213/552 (38%), Gaps = 78/552 (14%)
Query: 69 DHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
D + N+++ +RSR + W ++ V S V+Y L+ + + +A
Sbjct: 106 DSASFNIMVDGYVRSR---RLWDALKLFDVMPE---RSCVSYTTLIKGYAQNNQWSEAME 159
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGI------------------------------ 158
+F +M+N G N V+ T+I+ +GGI
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 159 -----GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
DARK+FDEM E N +T++V++ G + +E EL ++ E+
Sbjct: 220 LCLCLKDARKLFDEM----PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK------- 268
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ ++ ++D R+ +E E+ G EV+ M+D L R G+++
Sbjct: 269 --DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM---MVDLLSASARSVGSSK 323
Query: 274 IVY---EMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH--TYKVL 328
+ + KRGF D L IIH D Q DH + L
Sbjct: 324 GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK------DHIASRNAL 377
Query: 329 VEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQC 388
+ V++AREV K+ + + Y ++ S SQ
Sbjct: 378 IAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISS---SQV 434
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ D IT+ +V + GS++E K D L P+ +I ++ A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEG-KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
++FH+ +N + +NA+I G A +YS + S I +S T+ ++
Sbjct: 494 NIFHQT--KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSA 551
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
C +E K+++ + GI + Y ++ L ++G EA + ++ V
Sbjct: 552 CCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM---PVKA 608
Query: 568 NIFSYNILINCA 579
++ + +L++ +
Sbjct: 609 DVMIWGMLLSAS 620
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 129/643 (20%), Positives = 235/643 (36%), Gaps = 96/643 (14%)
Query: 6 FLISLKPKPF-IPFSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFSISLAS 64
++ISL+ + F P F + S + ++ + L + SN + Q L S
Sbjct: 14 WVISLQARCFSAPSRTHFDFS---GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKS 70
Query: 65 GSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPC 124
G + CN +L + R ++ R +++ ++D + RR
Sbjct: 71 GLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSA------SFNIMVDGYVRSRRLW 124
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
DA ++F M R + VSYTTLI GY +A ++F EM G+ N +T + +I
Sbjct: 125 DALKLFDVMPER----SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLC-------REGFFNE-- 235
G C++ + ++++++ +V NL+ C F+E
Sbjct: 181 SACSHL-----GGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 236 ------------------VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+ AEEL Q + + V +G MID + + A E
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M + G PS+V+ ++ + +G Q Y L + H +
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF----DCYDFLQATIIHFYA 351
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
V +KL L++ E+ + + + N
Sbjct: 352 VSND---IKLALQQ--------------------------------FEASVKDHIASRNA 376
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I GF K G V++A +V D K D+ S+ +ISG + A LF ++
Sbjct: 377 LIAGFVKNGMVEQAREVF-DQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREMISS 431
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEE 517
+ ++P +T ++ + L + + + I + I++ C IE
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 518 AKSFWHDV--IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
A + +H I S I + AI+ G G+ A +L + PN ++ +
Sbjct: 492 ALNIFHQTKNISSSTISP---WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 576 INCACHLDLKSEAYQIVREMKKN-GLNPDCVTWRILHKIQGKV 617
++ CH L MK + G+ PD + + + GK
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKA 591
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
R M + GL VTY LI+GL++ + A ++ MVSDG+ D TY I+++GLC
Sbjct: 5 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKN 64
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
++E+A +G + L GV PN+ +Y
Sbjct: 65 GKLEKA--------------------------LVAGKVEDGWDLFCSLSLKGVKPNVVTY 98
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+I+ C K EAY + R+MK++G PD T+ L
Sbjct: 99 TTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
+F +M RG N V+YTTLI G G A+++F EM+ GV P+ +TY++L+ G+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 188 LQERDL---------EGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEV 236
+ L E G +L C L + GVK V + ++ C++GF E
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLK-------GVKPNVVTYTTMISGFCKKGFKEEA 114
Query: 237 FRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHG 296
+ + ++ G L + Y +I + + G +A ++ EM+ F Y ++
Sbjct: 115 YTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTD 173
Query: 297 LTKDGDCMRGY 307
+ DG +G+
Sbjct: 174 MLHDGRLDKGF 184
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 102 GFVPSLVNYHRLMDQFC---------VFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGY 152
G P ++ Y+ L+D C V + D +F + +G PNVV+YTT+I+G+
Sbjct: 46 GVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 105
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKL 203
C G +A +F +M E G P+S TY+ LIR L++ D EL+ ++
Sbjct: 106 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 56/202 (27%)
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
TY L++ L D D A+E+ K M
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFK-----------------------------------EM 42
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGK-------FCA-------PDVV 429
+ D++T N +++G CK G +++AL + GK FC+ P+VV
Sbjct: 43 VSDGVPPDIMTYNILLDGLCKNGKLEKAL------VAGKVEDGWDLFCSLSLKGVKPNVV 96
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++TT+ISG +EA+ LF R M E+G P TYN LIR + + +
Sbjct: 97 TYTTMISGFCKKGFKEEAYTLF-RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 490 MVSDGIGADSTTYTIIVEGLCD 511
M S D++TY ++ + L D
Sbjct: 156 MRSCRFAGDASTYGLVTDMLHD 177
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 208/497 (41%), Gaps = 42/497 (8%)
Query: 123 PCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG-VEPNSLTYS 181
P +A +F + + P VVSYT LI+G+ + +A KVF M ++G V+PN T+
Sbjct: 130 PREAILVFVSLSS----PTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFV 185
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF-ANLVDSLCRE---GFFNEVF 237
++ ++ G ++ + V+SG + F +N + SL + ++V
Sbjct: 186 AILTACVRVSRFSLGIQI-------HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK-RGFVPSDVLYNYIIHG 296
++ +E+P Q +A + ++ SL K G+ H A + YEM + GF + ++
Sbjct: 239 KLFDEIP-QRDVAS---WNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 297 LTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK 356
T +RG + L+ +D+ K + ++M+ ++ V
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 357 TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQ 416
T + Y+ + + + IT N ++ GFC+ G +ALK+
Sbjct: 355 TEMITAYM--------SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 417 DMLMGKFCAPDVVSFTTVIS--GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
DML D S T+ + GL+ +V E F + PC+ T AL+
Sbjct: 407 DMLQRGVELTD-FSLTSAVDACGLVSEKKVSEQIHGFC-IKFGTAFNPCIQT--ALLDMC 462
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
+ +R DA ++ S+ + +TT I+ G ++A S +H + + +
Sbjct: 463 TRCERMADAEEMFDQWPSNLDSSKATTS--IIGGYARNGLPDKAVSLFHRTLCEQKLFLD 520
Query: 535 FVYAAILKGLCRSGNFNEACHFLY-ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVR 593
V ++ +C + F E + ++ + +G +I N LI+ +A +I
Sbjct: 521 EVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFN 580
Query: 594 EMKKNGLNPDCVTWRIL 610
M+++ D ++W L
Sbjct: 581 TMREH----DVISWNSL 593
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ T N +I FC++GS + ++ +M K P+ SF +ISG + DE +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEM-ERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
+M + G+ V TYN I+ L K K+ +A + M+S G+ ++ TY+ ++ G C
Sbjct: 245 LA-MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ D EEAK + ++ D+ Y ++ LC+ G+F A E ++ P+
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKN 598
L+N EA +++ ++K+
Sbjct: 364 IMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P L Y+R++ FC ++ I +M+ +G PN S+ +I+G+ + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAA 219
KV M + GV TY++ I+ + + + + + L+ + + +G+K
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM-------LSAGMKPNTVT 294
Query: 220 FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+++L+ C E F E ++ + + +G + Y +I LCK G + A + E
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 280 KRGFVPSDVLYNYIIHGLTKDG 301
++ +VPS + +++GL KD
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDS 376
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 402 FCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGL 460
+ + +D +L+V +D+ KF + V S ++ L A EA ++ + G+
Sbjct: 126 YAQANMLDHSLRVFRDL--EKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGI 183
Query: 461 RPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKS 520
P + TYN +I+ + + ++ + + M GI +S+++ +++ G D+ +E
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 521 FWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCA 579
++ G++ Y ++ LC+ EA L ++ +G+ PN +Y+ LI+
Sbjct: 244 VLA-MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 580 CHLDLKSEAYQIVREMKKNGLNPD 603
C+ D EA ++ + M G PD
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPD 326
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 72 TCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFF 131
T N+ + L + + + AL+ ++ A G P+ V Y L+ FC +A ++F
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSA--GMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
M NRG P+ Y TLI C G A + E +E P+ L+ G+ ++
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDS 376
Query: 192 DLEGGRELMCKLWERMSVEVE 212
+E +EL+ ++ E+ + VE
Sbjct: 377 KVEEAKELIGQVKEKFTRNVE 397
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 101/255 (39%), Gaps = 44/255 (17%)
Query: 233 FNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYN 291
+ E R+ E+P + ++ Y +MI C+ G + IV EM+++G P+ +
Sbjct: 167 YKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 292 YIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL--ML 349
+I G + DK+ EV K+ M+
Sbjct: 227 LMISGF--------------------------------------YAEDKSDEVGKVLAMM 248
Query: 350 RKEGVD-KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV 408
+ GV+ YNI +++ ML + + + +T + +I+GFC
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
+EA K+ + +++ + C PD + T+I L + A L M +N + P
Sbjct: 309 EEAKKLFK-IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV-PSFSIMK 366
Query: 469 ALIRGLYKLKRPNDA 483
+L+ GL K + +A
Sbjct: 367 SLVNGLAKDSKVEEA 381
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+IV + + S + Y ++ T+DG+ Y +K L+ A
Sbjct: 56 KIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAA 115
Query: 333 CHVFDVDKA----REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQC 388
+ D+ + REVL ++ KE + N+ RA + ES
Sbjct: 116 GELNDMKLSCRVFREVL-ILPGKEPLSSDCYLNLA-RAFINTDDCTYLTSLLKEISESSL 173
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+I +N +I F +T +D+ L +L++M + C PDV+++ +V+ L A V+E
Sbjct: 174 PYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWE-CKPDVITYNSVLDILGRAGLVNEIL 232
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+ + + + ++TYN ++ G+ K R + +Y+ MV GI D +YT +++
Sbjct: 233 GVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDS 292
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
L ++E+ + ++ +VY A++ L +SG+F A EL ++
Sbjct: 293 LGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTS 348
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 137/357 (38%), Gaps = 41/357 (11%)
Query: 142 VVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMC 201
V+ Y + + + + K+FDEMLE G++P++ T++ +I Q G +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQ----NGVPKRAV 230
Query: 202 KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS 261
+ +E+MS A ++D+ R G + + + + + V + +I
Sbjct: 231 EWFEKMS-SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRI 289
Query: 262 LCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXC 321
G Y G I EMK G P+ V+YN +I + G R +Q
Sbjct: 290 YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM---GRAKRPWQ------------- 333
Query: 322 DHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXX 381
A+ + K ++ Y +RA
Sbjct: 334 -------------------AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYR 374
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
M E VI NT+++ VDEA ++ QDM + C PD +F+++I+ +
Sbjct: 375 EMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACS 434
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
RV EA + M E G P + ++I+ K K+ +D + ++ GI D
Sbjct: 435 GRVSEAEAALLQ-MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 141/355 (39%), Gaps = 40/355 (11%)
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
E ++Y + K + ++ EM +RG P + + II ++G R +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXX 370
+ T +++A +VD A ++Y RA
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMA------------------LSLYDRART-- 273
Query: 371 XXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDM-LMGKFCAPDVV 429
+ R D +T +T+I + +G+ D L + ++M +G P++V
Sbjct: 274 ---------------EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG--VKPNLV 316
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
+ +I + A R +A + ++ + NG P TY AL+R + + +DA +Y
Sbjct: 317 IYNRLIDSMGRAKRPWQA-KIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI-WPSGIHDNFVYAAILKGLCRSG 548
M G+ Y ++ D ++EA + D+ + D++ +++++ SG
Sbjct: 376 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
+EA L ++ ++G P +F +I C + + ++ + G+ PD
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 139/349 (39%), Gaps = 48/349 (13%)
Query: 119 VFRRPCD---AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
VFR+ D + ++F +M RG P+ ++TT+I+ G A + F++M G EP
Sbjct: 184 VFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEP 243
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
+++T + +I + G ++ L++R E + + F+ L+ G ++
Sbjct: 244 DNVTMAAMIDAYGR----AGNVDMALSLYDRARTE-KWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
I EE+ G V+Y ++IDS+ + R A I ++ GF P N+
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP-----NW--- 350
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
TY LV A D A + + M +++G+
Sbjct: 351 ---------------------------STYAALVRAYGRARYGDDALAIYREM-KEKGLS 382
Query: 356 KTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQ-CRADVITLNTVINGFCKTGSVDEALK 413
T I YN L M + C D T +++I + +G V EA
Sbjct: 383 LTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEA 442
Query: 414 VLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
L M F P + T+VI A +VD+ F +V+ E G+ P
Sbjct: 443 ALLQMREAGF-EPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL-ELGITP 489
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Query: 392 VITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLF 451
V+TLN + N + A VL ++L + +V+ + + + ++++ LF
Sbjct: 146 VVTLNNMTNP-------ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLF 198
Query: 452 HRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCD 511
++ E G++P T+ +I + P A + M S G D+ T +++
Sbjct: 199 DEML-ERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR 257
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
++ A S + D ++ +++ SGN++ + E+ GV PN+
Sbjct: 258 AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
YN LI+ +A I +++ NG P+ T+ L + G+ R
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+VI N + F K+ ++++ K+ +ML + PD +FTT+IS A +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEML-ERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII----- 505
F + M G P VT A+I + + A +Y ++ D+ T++ +
Sbjct: 233 FEK-MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 506 VEGLCD-CDQI-EEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVD 562
V G D C I EE K+ G+ N V Y ++ + R+ +A +L+
Sbjct: 292 VSGNYDGCLNIYEEMKAL--------GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+G +PN +Y L+ +A I REMK+ GL+ + + L
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 43/196 (21%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P+LV Y+RL+D +RP A I+ D+ G PN +Y L+ Y DA
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++ EM E G+ + Y+ L+
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLL------------------------------------- 392
Query: 222 NLVDSLCREG-FFNEVFRIAEELP-CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
S+C + + +E F I +++ C+ + + +I GR A + +M+
Sbjct: 393 ----SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 280 KRGFVPSDVLYNYIIH 295
+ GF P+ + +I
Sbjct: 449 EAGFEPTLFVLTSVIQ 464
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 16/256 (6%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVIS----- 436
M E C+ DV NT+IN C+ G+ +A +L M + F PD ++T +IS
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 437 ----GLLDAT--RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
G A R+ EA +F R M G P VVTYN LI G K R A ++ M
Sbjct: 251 GMQTGCRKAIRRRMWEANRMF-REMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDM 309
Query: 491 VSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDV-IWPSGIHDNFVYAAILKGLCRSGN 549
+ G + TY + ++IE A + G+ + Y ++ L +
Sbjct: 310 KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRR 369
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRI 609
EA + E+V++G+ P ++Y ++ + L S + + + + G+ R+
Sbjct: 370 AAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYS--RV 427
Query: 610 LHKIQGKVRKQTLSEY 625
+ RK+ + +Y
Sbjct: 428 MKIKPTMARKEVVRKY 443
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 125 DAHRIFFDMKNRGHC-PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVE--PNSLTYS 181
+A F+ MK HC P+V +Y T+IN C VG AR + D+M G P++ TY+
Sbjct: 183 EALATFYRMKEY-HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 182 VLIRGVLQERDLEGGRE-LMCKLWERMSVEVESGVK-----VAAFANLVDSLCREGFFNE 235
+LI + G R+ + ++WE + E + V + L+D C+
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF-VPSDVLYNYII 294
+ E++ +G + +V Y I GA ++ MKK G VP Y +I
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
H L + ++TYK++ +AL
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 52/214 (24%)
Query: 101 PGF--VPSLVNYHRLMDQFCVF-----------RRPCDAHRIFFDMKNRGHCPNVVSYTT 147
PGF P Y L+ +C + RR +A+R+F +M RG P+VV+Y
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 148 LINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERM 207
LI+G C IG A ++F++M G PN +TY+ IR ++EG E+M R
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM-----RT 343
Query: 208 SVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGR 267
++ GV ++ Y +I +L + R
Sbjct: 344 MKKLGHGVPGSS----------------------------------TYTPLIHALVETRR 369
Query: 268 YHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
A +V EM + G VP + Y + L+ +G
Sbjct: 370 AAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 12/232 (5%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
+V T+N + CK V+EA V + + +F PD +++ T+I G D + EA L
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVF--IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKL 237
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGL 509
++ +M E G + ++ L K + ++A V+ MVS G D Y ++++ L
Sbjct: 238 WNLMMDE-GFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWL 296
Query: 510 CDCDQIEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
C +I+ A+ + D + G++ DN +A+++ GL EA Y LV+ +P+
Sbjct: 297 CKNGRIDMARKVF-DEMRERGVYVDNLTWASLIYGLLVKRRVVEA----YGLVEGVENPD 351
Query: 569 IFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQ 620
I Y+ LI + SEA ++ R+M + G P T+ +L +QG + ++
Sbjct: 352 ISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLML--LQGHLGRR 401
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 54/277 (19%)
Query: 84 RTPLQTWALVRSL--------IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKN 135
R L+T A R L ++ G++ ++ +R ++ C + +A +F +K
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE 209
Query: 136 RGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEG 195
P+ ++Y T+I G+C VG + +A K+++ M++ G + D+E
Sbjct: 210 FIK-PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDV----------------DIEA 252
Query: 196 GRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ-GSLAEEVV 254
G+++M ++L ++ F+E ++ + + G +
Sbjct: 253 GKKIM------------------------ETLLKKNQFDEASKVFYVMVSKRGGDLDGGF 288
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
Y MID LCK GR A ++ EM++RG ++ + +I+GL + Y
Sbjct: 289 YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE 348
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
Y L++ L + +A EV + M+++
Sbjct: 349 NPDIS----IYHGLIKGLVKIKRASEATEVFRKMIQR 381
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
Y +++ LC D+A + +L + YN+ +R M+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMI 72
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
D IT N++I+G CK + +A KV K C+ +F T+I+G ATRV
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV------SKSCS----TFNTLINGYCKATRV 122
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
+ +LF M G+ V+TY LI G ++ N A ++ MVS+G+ + S T+
Sbjct: 123 KDGMNLFCE-MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 505 IVEGLCDCDQIEEA 518
I+ LC ++ +A
Sbjct: 182 ILPQLCSRKELRKA 195
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+H LC + +F EA F+ L SG PD +T N+++ R + + L +I +
Sbjct: 21 IHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI--RR 74
Query: 102 GFVPSLVNYHR--------------------------LMDQFCVFRRPCDAHRIFFDMKN 135
G VP + Y+ L++ +C R D +F +M
Sbjct: 75 GLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYR 134
Query: 136 RGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEG 195
RG NV++YTTLI+G+ VG A +F EM+ +GV +S+T+ ++ + ++L
Sbjct: 135 RGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL-- 192
Query: 196 GRELMCKLWERMSV 209
R+ + L ++ S+
Sbjct: 193 -RKAVAMLLQKSSM 205
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
M ES D N +I+G CK G DEA + ++L+ PDV ++ +I +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGL-QPDVQTYNMMIR----FS 59
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
+ A L+ M GL P +TYN++I GL K + A V S +T+
Sbjct: 60 SLGRAEKLYAE-MIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS---------CSTF 109
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELV 561
++ G C ++++ + + + ++ GI N + Y ++ G + G+FN A E+V
Sbjct: 110 NTLINGYCKATRVKDGMNLFCE-MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 562 DSGV 565
+GV
Sbjct: 169 SNGV 172
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 18/217 (8%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F M+ + Y +I+G C G +A +F +L SG++P+ TY+++IR
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--- 57
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
L +L ++ R V + +++ LC++ + ++++
Sbjct: 58 -FSSLGRAEKLYAEMIRRGLVP-----DTITYNSMIHGLCKQNKLAQARKVSKSCS---- 107
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQ 308
+ +I+ CK R + EM +RG V + + Y +IHG + GD
Sbjct: 108 -----TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 309 XXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
T++ ++ LC ++ KA +L
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
+VM E+ + YN +I GL K + ++A ++++++ G+ D TY +++
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----F 58
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+ A+ + ++I + D Y +++ GLC+ +A VS + ++
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTF 109
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
N LIN C + + EM + G+ + +T+ L
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTL 147
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 533 DNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIV 592
D Y I+ GLC++G F+EA + L+ SG+ P++ +YN++I A ++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 593 REMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQSLS 629
EM + GL PD +T+ + I G ++ L++ + +S
Sbjct: 69 AEMIRRGLVPDTITYNSM--IHGLCKQNKLAQARKVS 103
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/524 (21%), Positives = 204/524 (38%), Gaps = 42/524 (8%)
Query: 48 SNRFSEAHQCFSISLASGS--VPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGF-- 103
++ F EA + F S S +PDH T LL P V + V K GF
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC-NDAVPQNAVGQVHAFAV-KLGFDT 180
Query: 104 VPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARK 163
P L + L+ +C RR A +F ++ + + V++ TLI GY G ++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DSVTFNTLITGYEKDGLYTESIH 236
Query: 164 VFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANL 223
+F +M +SG +P+ T+S +++ V+ D G++L +SV + +
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA-----LSVTTGFSRDASVGNQI 291
Query: 224 VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
+D + E + +E+P + V Y +I S + +Y + EM+ GF
Sbjct: 292 LDFYSKHDRVLETRMLFDEMP----ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 284 VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE--ALCHVFDVDKA 341
+ + ++ G Q H LV+ A C +F ++A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF--EEA 405
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+ K + ++ V T + + Y++ M S RAD T TV+
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQ----KGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
S+ K L ++ +V S + ++ + +A +F MP+
Sbjct: 462 SASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE-MPDRN-- 517
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
V++NALI A G ++ M+ G+ DS + ++ C +E+ +
Sbjct: 518 --AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 522 WHDV-----IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
+ + I P H YA +L L R+G F EA + E+
Sbjct: 576 FQAMSPIYGITPKKKH----YACMLDLLGRNGRFAEAEKLMDEM 615
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 71 RTCNVLLARLLRSRTPLQTWALVRSL--IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHR 128
R A +L++ + L + L + + G + ++ + L+D + DA +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
+F +M +R N VS+ LI+ + G A F +M+ESG++P+S++ I GVL
Sbjct: 509 VFEEMPDR----NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS----ILGVL 560
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
G E + ++ MS K +A ++D L R G F E ++ +E+P +
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE-- 618
Query: 249 LAEEVVYGQMIDSLCKVGRYHG----AARIVYEMKK 280
+E+++ ++++ C++ + AA ++ M+K
Sbjct: 619 -PDEIMWSSVLNA-CRIHKNQSLAERAAEKLFSMEK 652
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPD--VVSFTTVISGLLDATRVDEAF 448
+ ++ NT+I+G KTG V A + M PD VV++T ++ + DEAF
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAM-------PDRTVVTWTILMGWYARNSHFDEAF 130
Query: 449 DLFHRVMPENGLR-PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS--TTYTII 505
LF ++ + P VT+ L+ G N V++ V G + T ++
Sbjct: 131 KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
++ C+ +++ A + ++ P D+ + ++ G + G + E+ H ++ SG
Sbjct: 191 LKSYCEVRRLDLACVLFEEI--PE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH 246
Query: 566 SPNIFSYNILINCACHL 582
P+ F+++ ++ L
Sbjct: 247 QPSDFTFSGVLKAVVGL 263
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 211/528 (39%), Gaps = 67/528 (12%)
Query: 93 VRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGY 152
V SLI P F+ + L+D + DA R+F +M +R NVVS+ +LI +
Sbjct: 174 VHSLIAKSP-FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR----NVVSWNSLITCF 228
Query: 153 CSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVE 212
G +A VF MLES VEP+ +T + +I ++ G+E+ ++ + + +
Sbjct: 229 EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND 288
Query: 213 SGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
+ A VD + E I + +P + +AE MI A
Sbjct: 289 IILSNA----FVDMYAKCSRIKEARFIFDSMPIRNVIAET----SMISGYAMAASTKAAR 340
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+ +M +R V +N +I G T++G+ +++ +++A
Sbjct: 341 LMFTKMAERNVVS----WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
+ ++ + + + K G +S D+
Sbjct: 397 ADLAELHLGMQA-HVHVLKHGFK----------------------------FQSGEEDDI 427
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
N++I+ + K G V+E V + M+ D VS+ +I G +EA +LF
Sbjct: 428 FVGNSLIDMYVKCGCVEEGYLVFRKMM-----ERDCVSWNAMIIGFAQNGYGNEALELF- 481
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIVEGLCD 511
R M E+G +P +T ++ + +SSM D G+ YT +V+ L
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 512 CDQIEEAKSFWHDV-IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP-NI 569
+EEAKS ++ + P D+ ++ ++L N + +L++ V P N
Sbjct: 542 AGFLEEAKSMIEEMPMQP----DSVIWGSLLAACKVHRNITLGKYVAEKLLE--VEPSNS 595
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGL--NPDCVTWRILHKIQG 615
Y +L N L + + + M+K G+ P C +W KIQG
Sbjct: 596 GPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC-SWI---KIQG 639
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 164/434 (37%), Gaps = 68/434 (15%)
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
R V +++SG + LI + LE GR++ K+ +R + +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR---------NIYTWN 90
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
++V L + GF +E + +P + ++ + M+ + R A M K
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKE 146
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
GFV ++ + ++ + D +G Q + LV+ +V+ A
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+ V M + +V++ N++I
Sbjct: 207 QRVFDEMGDR---------------------------------------NVVSWNSLITC 227
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLR 461
F + G EAL V Q ML + PD V+ +VIS + + ++ RV+ + LR
Sbjct: 228 FEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 462 PCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSF 521
++ NA + K R +A ++ SM + A+++ ++ G + A+
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS----MISGYAMAASTKAAR-- 340
Query: 522 WHDVIWPSGIHDNFV-YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY-NILINCA 579
+++ N V + A++ G ++G EA L V P +S+ NIL CA
Sbjct: 341 ---LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 580 ----CHLDLKSEAY 589
HL +++ +
Sbjct: 398 DLAELHLGMQAHVH 411
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 94/512 (18%), Positives = 194/512 (37%), Gaps = 37/512 (7%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
V K GF + +RL+D + D ++F M R N+ ++ +++ G +G
Sbjct: 46 VIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGF 101
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ +A +F M E + T++ ++ G Q E E +C M + +
Sbjct: 102 LDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCE---EALCYF--AMMHKEGFVLNE 152
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
+FA+++ + N+ ++ + L++ + ++D K G + A R+ E
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 278 MKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFD 337
M R V +N +I ++G + + T ++ A +
Sbjct: 213 MGDRNVVS----WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 338 VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNT 397
+ +EV +++ DK R I A + +S +VI +
Sbjct: 269 IKVGQEVHGRVVKN---DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPE 457
+I+G+ S A ++ K +VVS+ +I+G +EA LF ++
Sbjct: 326 MISGYAMAASTKAA-----RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKR 379
Query: 458 NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG--LCD---- 511
+ P ++ +++ L + + ++ G S I G L D
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
C +EE + ++ D + A++ G ++G NEA E+++SG P+ +
Sbjct: 440 CGCVEEGYLVFRKMM----ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 572 YNILINCACHLDLKSEAYQIVREMKKN-GLNP 602
+++ H E M ++ G+ P
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 192/475 (40%), Gaps = 73/475 (15%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
++V+++ L+ + R +A +F M R NVVS+T ++ GY G +G+A +F
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
M E N ++++V+ G++ + ++ R KL++ M V+ V A N++
Sbjct: 134 WRMPER----NEVSWTVMFGGLIDDGRIDKAR----KLYDMMPVK-----DVVASTNMIG 180
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
LCREG +E I +E+ + V + MI + R A ++ M ++
Sbjct: 181 GLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEK---- 232
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
++V + ++ G T G + C+ ++ V ++ KAR V
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN----AMIVGFGEVGEISKARRVF 288
Query: 346 KLM------------------------------LRKEGVDKTRIYNI-YLRAXXXXXXXX 374
LM ++K+GV + I L
Sbjct: 289 DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 375 XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTV 434
++ Q DV + ++ + K G + +A ++ +F + D++ + ++
Sbjct: 349 YGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA-----KLVFDRFSSKDIIMWNSI 403
Query: 435 ISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDG 494
ISG +EA +FH MP +G P VT A++ + + ++ SM S
Sbjct: 404 ISGYASHGLGEEALKIFHE-MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 495 -IGADSTTYTIIVEGLCDCDQIEEAKSFWHDV-IWPSGIHDNFVYAAILKGLCRS 547
+ Y+ V+ L Q+++A + I P D V+ A+L G C++
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP----DATVWGALL-GACKT 512
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DV+ +I G C+ G VDEA + +M +VV++TT+I+G RVD A L
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F VMPE V++ +++ G R DA + M + A + ++ G
Sbjct: 226 FE-VMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA----MIVGFG 276
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ +I +A+ + D++ DN + ++K R G EA ++ GV P+
Sbjct: 277 EVGEISKARRVF-DLMED---RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFP 332
Query: 571 SY-NILINCACHLDLK 585
S +IL CA L+
Sbjct: 333 SLISILSVCATLASLQ 348
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 10/279 (3%)
Query: 328 LVEALCHVFDVDKAREV---LKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
LV+ALC V +A E+ ++ V T+I+N+ LR M
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
D+ + + ++ CK+G +A+K+ ++M + DVV++ TVI + + V
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM-KSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
+ +F R M E G P V T+N +I+ L + R DA+ + M G DS TY
Sbjct: 276 EFGIRVF-REMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDS 563
+ L ++ E S + +I SG+ Y +++ R G + + +S
Sbjct: 335 LFSRL---EKPSEILSLFGRMI-RSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES 390
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
G +P+ +YN +I+ + A + EM + GL+P
Sbjct: 391 GDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 44/287 (15%)
Query: 35 QHSIATTLHALCDSNRFSEAHQ-CFSISLASG--SVPDHRTCNVLLARLLRSRTPLQTWA 91
+ S + ALC+ EA + CF ++ SV + + N++L R + L W
Sbjct: 151 ETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLIL----RGWSKLGWWG 206
Query: 92 LVRSLI--VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLI 149
+ + G L +Y MD C +P A +++ +MK+R +VV+Y T+I
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 150 NGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQE---RD-------------- 192
+ G+ +VF EM E G EPN T++ +I+ + ++ RD
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 193 ------------LEGGRELMCKLWERMSVEVESGV--KVAAFANLVDSLCREGFFNEVFR 238
LE E++ L+ RM + SGV K+ + L+ R GF V
Sbjct: 327 PDSITYMCLFSRLEKPSEILS-LFGRM---IRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 239 IAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
+ + + G + Y +ID+L + G A EM +RG P
Sbjct: 383 VWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 116/290 (40%), Gaps = 7/290 (2%)
Query: 326 KVLVEAL-CHVFDVDKAREVLKLMLRKEGV-DKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
K + EAL C+ D KA E + R+ G T +N + M
Sbjct: 48 KTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRM 107
Query: 384 L-ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
+ ++ + +T V + V EA+ + F D SF ++ L +
Sbjct: 108 IGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL--DDFNLRDETSFYNLVDALCEHK 165
Query: 443 RVDEAFDL-FHRVMPENGLRPC-VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADST 500
V EA +L F + + NG +N ++RG KL + M ++G+ D
Sbjct: 166 HVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLF 225
Query: 501 TYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYEL 560
+Y+I ++ +C + +A + ++ D Y +++ + S E+
Sbjct: 226 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 561 VDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ G PN+ ++N +I C +AY+++ EM K G PD +T+ L
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 172/428 (40%), Gaps = 39/428 (9%)
Query: 7 LISLKPKPFIPFSLRFSTTIATPSSPSLQHSIATTLHALCDSNRFSEAHQCFS-ISLASG 65
L+S+KP + +F + S Q ++ L C SN + +A + F+ + SG
Sbjct: 20 LLSVKPISNVD-DAKFRSQEEEDQSSYDQKTVCEAL--TCYSNDWQKALEFFNWVERESG 76
Query: 66 SVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCD 125
T N ++ L + +WAL+ +I VP+ V + VF+R
Sbjct: 77 FRHTTETFNRVIDILGKYFEFEISWALINRMI-GNTESVPNHVTFR------IVFKRYVT 129
Query: 126 AHRI-----FFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV--FDEMLESGVE-PNS 177
AH + +D + + + S+ L++ C + +A ++ ++ +G N+
Sbjct: 130 AHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNT 189
Query: 178 LTYSVLIRGVLQERDLEGGRELMCK-LWERMSVEVESGVKVAAFANLV--DSLCREGFFN 234
+++++RG + G CK W++M E GV F+ + D +C+ G
Sbjct: 190 KIHNLILRGWSK-----LGWWGKCKEYWKKMDTE---GVTKDLFSYSIYMDIMCKSGKPW 241
Query: 235 EVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYII 294
+ ++ +E+ + + V Y +I ++ R+ EM++RG P+ +N II
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 295 HGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKL---MLRK 351
L +DG Y+ TY +C ++K E+L L M+R
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRS 355
Query: 352 EGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEA 411
K Y + +R +M ES D N VI+ + G +D A
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
Query: 412 LKVLQDML 419
+ ++M+
Sbjct: 416 REYEEEMI 423
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 113/611 (18%), Positives = 231/611 (37%), Gaps = 65/611 (10%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
++ L + F+E Q L G + CN L+ R+ L S
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK------LELSR 144
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
V +L +++ ++ + DA + +M+ G P++V++ +L++GY S G
Sbjct: 145 KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRE-----LMCKLW------- 204
DA V M +G++P++ + S L++ V + L+ G+ L +LW
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 205 --------------ERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLA 250
RM ++ + A+ +LV L + + + +G
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 251 EEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXX 310
+ + + + +G+ A ++ +MK++G P+ V + I G +K+G+ +
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 311 XXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK----EGVDKTRIYNIYLRA 366
T L++ L + + +EV LRK + T + ++Y ++
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
L S N ++ G+ G +E + ML P
Sbjct: 445 GDLQSAIEIFWGIKNKSLAS--------WNCMLMGYAMFGRGEEGIAAFSVMLEAGM-EP 495
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D ++FT+V+S ++ V E + F + G+ P + + ++ L + ++A+
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWH--DVIWPSGIHDNFVYAAILKGL 544
+M + D+T + + +E A+ W V+ P H++ Y ++
Sbjct: 556 IQTM---SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEP---HNSANYMMMINLY 609
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHL------------DLKSEAYQIV 592
+ + + ++ V I I+ H+ D+ E Y++V
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
Query: 593 REMKKNGLNPD 603
EMKK+G PD
Sbjct: 670 SEMKKSGYVPD 680
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 106/221 (47%), Gaps = 10/221 (4%)
Query: 390 ADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
++V N++I + + G ++ + KV M ++ S+ +++S VD+A
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMK-----DRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
L M GL+P +VT+N+L+ G DA V M G+ +++ + +++ +
Sbjct: 177 LLDE-MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
+ ++ K+ ++ +D +V ++ ++G A +++++D+ NI
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA-RMVFDMMDA---KNI 291
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
++N L++ + L +A ++ M+K G+ PD +TW L
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/353 (17%), Positives = 140/353 (39%), Gaps = 12/353 (3%)
Query: 255 YGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
+ ++ S K+G A ++ EM+ G P V +N ++ G G
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXX 374
+ L++A+ + + + +LR + Y++Y+
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ-----LWYDVYVETTLIDMYIK 272
Query: 375 XXXXXXXSMLESQCRA-DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
M+ A +++ N++++G + +A + L + + PD +++ +
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA-EALMIRMEKEGIKPDAITWNS 331
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+ SG + ++A D+ + M E G+ P VV++ A+ G K +A V+ M +
Sbjct: 332 LASGYATLGKPEKALDVIGK-MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
G+G ++ T + +++ L + K + + I D +V A++ +SG+ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 554 CHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ + + ++ S+N ++ E M + G+ PD +T
Sbjct: 451 IEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 397 TVINGFCKT-GSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
T+I CK G++ A ++L D L G+ + F+ VI L V +A L M
Sbjct: 341 TLITALCKNDGTITFAQEMLGD-LSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLD-M 398
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
G P +N ++ K ++A V M S G+ D TYT+I+ G +
Sbjct: 399 ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMM 458
Query: 516 EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNIL 575
+EA+ + Y A+++G C+ ++EA L E+ GV PN YN L
Sbjct: 459 DEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL 518
Query: 576 INCACHLDLKSEAYQIV-REMKKNGLNPDCVTWRILHKIQ 614
I C L E +++ EMK+ GL+ + ++ ++ ++
Sbjct: 519 IQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVK 558
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 57/397 (14%)
Query: 90 WALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLI 149
W LV+ + + V +L + L+ F + A +F + G PN +Y +
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTL 273
Query: 150 NGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV 209
C + A V ++ML+SGV +I +E G E ++E ++
Sbjct: 274 EALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKE----GKAEEAYSVYE-LAK 328
Query: 210 EVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV------VYGQMIDSLC 263
E + A L+ +LC+ + A+E+ G L+ E + +I SLC
Sbjct: 329 TKEKSLPPRFVATLITALCKN---DGTITFAQEM--LGDLSGEARRRGIKPFSDVIHSLC 383
Query: 264 KVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDH 323
++ A ++ +M +G P + ++N ++H +K G
Sbjct: 384 RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG---------------------- 421
Query: 324 TYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSM 383
D+D+A+EVLKLM + Y + +
Sbjct: 422 -------------DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 384 LESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKF-CAPDVVSFTTVISGL-LDA 441
+ + +T + +I G+CK DEALK+L + M +F P+ + +I L A
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNE--MDRFGVQPNADEYNKLIQSFCLKA 526
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLK 478
++A LF M + GL ++ LIR + +++
Sbjct: 527 LDWEKAEVLFEE-MKQKGLHLNAIS-QGLIRAVKEME 561
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 398 VINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV-MP 456
+ CK +D A V + ML + + +I+ + +EA+ ++
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLS-EGEQMGNIITWFCKEGKAEEAYSVYELAKTK 330
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS-----TTYTIIVEGLCD 511
E L P V LI L K ND ++ + + ++ ++ ++ LC
Sbjct: 331 EKSLPPRFVA--TLITALCK----NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCR 384
Query: 512 CDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
+++AK+ D+I N V+ ++ ++G+ +EA L + G+ P++++
Sbjct: 385 MRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYT 444
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
Y ++I+ + EA +I+ E KK VT+ L
Sbjct: 445 YTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHAL 483
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 131/304 (43%), Gaps = 35/304 (11%)
Query: 36 HSIATTLHALCDSNRFSEAHQCFSISLASGSVP-DHRTCNVLLARLLRSRTPLQTWALVR 94
S L LC+ + S A F+ G++P D + N++++ + + +++
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLK 279
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
++ + GF P ++Y L++ R D+ IF ++K++G+ P+ Y +I + S
Sbjct: 280 EMV--ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEV--- 211
++ + + ML+ EPN TYS L+ G+++ R + E+ ++ R +
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 212 -------------------------ESGVKV--AAFANLVDSLCREGFFNEVFRIAEELP 244
++G ++ +A+ L+ L R G + + +E+
Sbjct: 398 VTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQ 457
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCM 304
G ++ VY ++D LC +G A ++ E ++GF P+ +Y+ + L
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Query: 305 RGYQ 308
Y+
Sbjct: 518 LAYK 521
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 172/444 (38%), Gaps = 52/444 (11%)
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSL 227
E GV + +YSV++R + G R+L + + + V GV + +DS
Sbjct: 144 EPGVTKDVGSYSVILRAL-------GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYH-GAARIVYEMKKRGFVPS 286
R + + EE G + ++ LC+ R H AA+ V+ KK G +P
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCE--RSHVSAAKSVFNAKK-GNIPF 253
Query: 287 DVL-YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVL 345
D YN +I G +K G+ + +Y L+E L ++ + E+
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 346 KLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKT 405
+ K V +YN +I F
Sbjct: 314 DNIKHKGNVPDANVYN-----------------------------------AMICNFISA 338
Query: 406 GSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVV 465
DE+++ + ML + C P++ +++ ++SGL+ +V +A ++F ++ G+ P
Sbjct: 339 RDFDESMRYYRRML-DEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR-GVLPTTG 396
Query: 466 TYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDV 525
+ ++ L P+ A +Y G + Y ++++ L + + W ++
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 526 IWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLK 585
D VY I+ GLC G+ A + E + G PN F Y+ L + +
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Query: 586 SEAYQIVREMKKNGLNPDCVT-WR 608
AY++ ++KK + + WR
Sbjct: 517 ELAYKLFLKIKKARATENARSFWR 540
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 6/256 (2%)
Query: 349 LRKEGVDK-TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGS 407
+R+ GV K Y++ LRA M+ D+ L ++ F +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 408 VDEALKVLQDM-LMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
V A+++ ++ G C+ + SF ++ L + + V A +F+ C +
Sbjct: 202 VRRAIELFEESESFGVKCSTE--SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSC--S 257
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
YN +I G KL + V MV G G D +Y+ ++EGL +I ++ + ++
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKS 586
+ D VY A++ + +F+E+ + ++D PN+ +Y+ L++ S
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVS 377
Query: 587 EAYQIVREMKKNGLNP 602
+A +I EM G+ P
Sbjct: 378 DALEIFEEMLSRGVLP 393
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/485 (19%), Positives = 197/485 (40%), Gaps = 76/485 (15%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P+ V + L + P +A +F M++ GH P+ +++ T+IN Y +G + DAR +
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV 224
F EM P+ + ++V+I G G R E +S VK + + L
Sbjct: 284 FGEM----SSPDVVAWNVMISG-------HGKRGCETVAIEYFFNMRKSSVK-STRSTLG 331
Query: 225 DSLCREGFFN--EVFRIAEELPCQGSLAEEVVYGQMIDSL-CKVGRYHGAARIVYEMKKR 281
L G ++ + + LA + G + S+ K + AA++ ++++
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
+DV +N +I G +G+ + + D T+ L+ D++
Sbjct: 392 ----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 342 REVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVING 401
+ ++++K + ++ N +++
Sbjct: 448 SQFHSIIIKK-----------------------------------KLAKNLFVGNALVDM 472
Query: 402 FCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR-----VMP 456
+ K G++++A ++ + M C D V++ T+I + EAFDLF R ++
Sbjct: 473 YAKCGALEDARQIFERM-----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
+ + + GLY+ K+ V+ V G+ D T + +++ C I+
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQ------VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 517 EAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILI 576
+A+ + + S + N A++ G ++ N EA E++ GV+P+ ++ ++
Sbjct: 582 DARKVFSSLPEWSVVSMN----ALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 577 NCACH 581
ACH
Sbjct: 637 E-ACH 640
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 153/394 (38%), Gaps = 44/394 (11%)
Query: 141 NVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELM 200
+V ++ ++++ Y S+G G + F + E+ + PN T+S+++ +E ++E GR++
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 201 CKLWERMSVEVES---GVKVAAFAN------------------------LVDSLCREGFF 233
C + +M +E S G V +A L + G
Sbjct: 184 CSMI-KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLP 242
Query: 234 NEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
E + E + +G + + + +I++ ++G+ A + EM P V +N +
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVM 298
Query: 294 IHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEG 353
I G K G + T ++ A+ V ++D L L++ E
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD-----LGLVVHAEA 353
Query: 354 VDKTRIYNIYLRAXXXXXXXX-XXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEAL 412
+ NIY+ + + E+ + + N +I G+ G + +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 413 KVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIR 472
++ DM + D +FT+++S A+ E FH ++ + L + NAL+
Sbjct: 414 ELFMDMKSSGYNIDD-FTFTSLLS-TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVD 471
Query: 473 GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
K DA ++ M D+ T+ I+
Sbjct: 472 MYAKCGALEDARQIFERMCD----RDNVTWNTII 501
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 51 FSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNY 110
+ EA + + G +PD T V + R+ + L+ + SLI + L +
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATF-VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS- 770
Query: 111 HRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLE 170
+ L+D + + ++F +M+ R NVVS+ +LINGY G DA K+FD M +
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 171 SGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCRE 230
S + P+ +T+ ++ + GR K++E M + +V A +VD L R
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGR----KIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 231 GFFNEV 236
G+ E
Sbjct: 884 GYLQEA 889
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 153/354 (43%), Gaps = 36/354 (10%)
Query: 257 QMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD-GDCMRGYQXXXXXXX 315
++I + G GA R+ + M+ + + + +N ++ G++KD M +Q
Sbjct: 66 KIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 316 XXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXX 375
+Y +++ + +KA+ M K+ +N +
Sbjct: 122 PDTF----SYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS----WNTMITGYARRGEMEK 173
Query: 376 XXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP--DVVSFTT 433
SM+E + ++ N +I+G+ + G +++A + AP VV++T
Sbjct: 174 ARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFK-------VAPVRGVVAWTA 222
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+I+G + A +V+ A +F + L VT+NA+I G + RP D ++ +M+ +
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNL----VTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI-HDNFVYAAILKGLCRSGNFNE 552
GI +S+ + + G + ++ + H ++ S + +D +++ C+ G +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 553 ACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
A ++L + ++ ++N +I+ +A + REM N + PD +T
Sbjct: 338 A----WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 201/514 (39%), Gaps = 46/514 (8%)
Query: 92 LVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCD-AHRIFFDMKNRGHCPNVVSYTTLIN 150
LVRS + KP + ++++ + CV D A R+F M+ + N +++ +L+
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIAR-CVRSGDIDGALRVFHGMRAK----NTITWNSLLI 100
Query: 151 GYCS-VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSV 209
G + +A ++FDE+ EP++ +Y++++ ++ + E + ++RM
Sbjct: 101 GISKDPSRMMEAHQLFDEI----PEPDTFSYNIMLSCYVRNVNFEKAQSF----FDRMPF 152
Query: 210 EVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYH 269
+ A++ ++ R G + A EL EV + MI + G
Sbjct: 153 K-----DAASWNTMITGYARRGEMEK----ARELFYSMMEKNEVSWNAMISGYIECGDLE 203
Query: 270 GAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLV 329
A+ RG V + +I G K T+ ++
Sbjct: 204 KASHFFKVAPVRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLV---TWNAMI 256
Query: 330 EALCHVFDVDKAREVLKLMLRKEGV--DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ 387
+ ++ + ML +EG+ + + + + L +
Sbjct: 257 SGYVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 388 CRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
C DV L ++I+ +CK G + +A K+ + M DVV++ +ISG D+A
Sbjct: 316 CN-DVTALTSLISMYCKCGELGDAWKLFEVMK-----KKDVVAWNAMISGYAQHGNADKA 369
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD-GIGADSTTYTIIV 506
LF R M +N +RP +T+ A++ N + SMV D + YT +V
Sbjct: 370 LCLF-REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVS 566
+ L ++EEA + P H V+ +L G CR E F E + S
Sbjct: 429 DLLGRAGKLEEALKLIRSM--PFRPHAA-VFGTLL-GACRVHKNVELAEFAAEKLLQLNS 484
Query: 567 PNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
N Y L N + + ++ + MK++ +
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNV 518
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 126/613 (20%), Positives = 220/613 (35%), Gaps = 120/613 (19%)
Query: 52 SEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTP---LQTWALVRSLIVAKPGFVP-SL 107
+EA F + SG PD T L+ +SR +Q L+ + AK FV SL
Sbjct: 116 NEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
V+++ + A ++F +M R NVVS+T++I GY DA +F
Sbjct: 176 VHFYAECGELD------SARKVFDEMSER----NVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 168 ML-ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
M+ + V PNS+T +I + DL E+G KV AF
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDL------------------ETGEKVYAF------ 261
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
+ G +++ ++D K A R+ E
Sbjct: 262 ----------------IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 287 DVLY-NYIIHGLTKDG----DCM--RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ + NY+ GLT++ + M G + C +L CH + +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
E + + ++Y++ + + V+T N+++
Sbjct: 366 NGFESWDNICNA-------LIDMYMKCHRQDTAF--------RIFDRMSNKTVVTWNSIV 410
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G+ + G VD A + + M ++VS+ T+ISGL+ + +EA ++F + + G
Sbjct: 411 AGYVENGEVDAAWETFETMP-----EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+ VT ++ L + A +Y + +GI D T +V+ C E A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 520 SFWH-------------------------------DVIWPSGIHDNFVYAAILKGLCRSG 548
S ++ D+I D + L G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 549 NFNEACHFLYELVD-SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ Y ++ GVSP Y +++ L EA Q++ +M + P+ V W
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIW 642
Query: 608 RILH---KIQGKV 617
L ++QG V
Sbjct: 643 NSLLAACRVQGNV 655
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 126/614 (20%), Positives = 220/614 (35%), Gaps = 120/614 (19%)
Query: 52 SEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTP---LQTWALVRSLIVAKPGFVP-SL 107
+EA F + SG PD T L+ +SR +Q L+ + AK FV SL
Sbjct: 116 NEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 108 VNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDE 167
V+++ + A ++F +M R NVVS+T++I GY DA +F
Sbjct: 176 VHFYAECGELD------SARKVFDEMSER----NVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 168 ML-ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
M+ + V PNS+T +I + DL E+G KV AF
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDL------------------ETGEKVYAF------ 261
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
+ G +++ ++D K A R+ E
Sbjct: 262 ----------------IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 287 DVLY-NYIIHGLTKDG----DCM--RGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ + NY+ GLT++ + M G + C +L CH + +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
E + + ++Y++ + + V+T N+++
Sbjct: 366 NGFESWDNICNA-------LIDMYMKCHRQDTAFR--------IFDRMSNKTVVTWNSIV 410
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
G+ + G VD A + + M ++VS+ T+ISGL+ + +EA ++F + + G
Sbjct: 411 AGYVENGEVDAAWETFETM-----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAK 519
+ VT ++ L + A +Y + +GI D T +V+ C E A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 520 SFWH-------------------------------DVIWPSGIHDNFVYAAILKGLCRSG 548
S ++ D+I D + L G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 549 NFNEACHFLYELVD-SGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+ Y ++ GVSP Y +++ L EA Q++ +M + P+ V W
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIW 642
Query: 608 RILH---KIQGKVR 618
L ++QG V
Sbjct: 643 NSLLAACRVQGNVE 656
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAP-DVVSFTTVISGLLDA---TRVDEAFDL 450
L+T+I + + D A+K+ ++M K P VVSF +++ L + RV + FD
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEM--DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDE 162
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F + N + P ++Y LI+ +P A + M G+ +T I+ L
Sbjct: 163 FPQRY--NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
++EA+S W +++ DN VY L + + E+ G+ P+
Sbjct: 221 KNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTV 279
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
SYN L+ C + SEA ++ +++ P+ T+R L
Sbjct: 280 SYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTL 315
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+++G CK G V EA+K+ ++ K P+VV +T V+ A ++++A +F R M
Sbjct: 136 AMLDGLCKDGLVQEAMKLF-GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIF-RKMQ 193
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
NG+ P +Y L++GLY +DA S M+ G + T+ +V+ LC +E
Sbjct: 194 NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVE 253
Query: 517 EAKS 520
+A+S
Sbjct: 254 QAQS 257
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P+ V ++D C +A ++F M+++G P VV YT ++ +C I DA
Sbjct: 129 GLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG--VKVAA 219
+++F +M +G+ PN+ +Y VL++G+ L+ ++ +ESG V
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM-------LESGHSPNVPT 238
Query: 220 FANLVDSLCR 229
F LVD+LCR
Sbjct: 239 FVELVDALCR 248
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
E D + M E GL P V A++ GL K +A ++ M G + YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSG 564
VE C +IE+AK + + +GI N F Y +++GL ++A F E+++SG
Sbjct: 173 VEAFCKAHKIEDAKRIFRK-MQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
SPN+ ++ L++ C + +A + + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P +V Y +++ FC + DA RIF M+N G PN SY L+ G + + DA
Sbjct: 161 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
EMLESG PN T+ L+ + + + +E + + L ++
Sbjct: 221 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
++ GL V EA LF +M + G P VV Y A++ K + DA ++ M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFG-LMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFN 551
+GI ++ +Y ++V+GL +C+ +++A +F +++ SG N + ++ LCR
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-SGHSPNVPTFVELVDALCRVKGVE 253
Query: 552 EACHFLYELVDSGVSPNI 569
+A + L G + N+
Sbjct: 254 QAQSAIDTLNQKGFAVNV 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV 536
L P D+ ++ M G+ ++ +++GLC ++EA + + I + +
Sbjct: 112 LPPPEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
Y A+++ C++ +A ++ ++G++PN FSY +L+ + ++ +A EM
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 597 KNGLNPDCVTW 607
++G +P+ T+
Sbjct: 229 ESGHSPNVPTF 239
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
E G+ A A ++D LC++G E ++ + +G++ E V+Y ++++ CK + A
Sbjct: 127 EGGLIPNAVA-MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
RI +M+ G P+ Y ++ GL T+ LV+A
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 332 LCHVFDVDKAREVLKLMLRK 351
LC V V++A+ + + +K
Sbjct: 246 LCRVKGVEQAQSAIDTLNQK 265
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+++G CK G V EA+K+ ++ K P+VV +T V+ A ++++A +F R M
Sbjct: 136 AMLDGLCKDGLVQEAMKLF-GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIF-RKMQ 193
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIE 516
NG+ P +Y L++GLY +DA S M+ G + T+ +V+ LC +E
Sbjct: 194 NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVE 253
Query: 517 EAKS 520
+A+S
Sbjct: 254 QAQS 257
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P+ V ++D C +A ++F M+++G P VV YT ++ +C I DA
Sbjct: 129 GLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG--VKVAA 219
+++F +M +G+ PN+ +Y VL++G+ L+ ++ +ESG V
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM-------LESGHSPNVPT 238
Query: 220 FANLVDSLCR 229
F LVD+LCR
Sbjct: 239 FVELVDALCR 248
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTII 505
E D + M E GL P V A++ GL K +A ++ M G + YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSG 564
VE C +IE+AK + + +GI N F Y +++GL ++A F E+++SG
Sbjct: 173 VEAFCKAHKIEDAKRIFRK-MQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
SPN+ ++ L++ C + +A + + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G +P +V Y +++ FC + DA RIF M+N G PN SY L+ G + + DA
Sbjct: 161 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
EMLESG PN T+ L+ + + + +E + + L ++
Sbjct: 221 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
++ GL V EA LF +M + G P VV Y A++ K + DA ++ M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFG-LMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 493 DGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFN 551
+GI ++ +Y ++V+GL +C+ +++A +F +++ SG N + ++ LCR
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-SGHSPNVPTFVELVDALCRVKGVE 253
Query: 552 EACHFLYELVDSGVSPNI 569
+A + L G + N+
Sbjct: 254 QAQSAIDTLNQKGFAVNV 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFV 536
L P D+ ++ M G+ ++ +++GLC ++EA + + I + +
Sbjct: 112 LPPPEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 168
Query: 537 YAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK 596
Y A+++ C++ +A ++ ++G++PN FSY +L+ + ++ +A EM
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 597 KNGLNPDCVTW 607
++G +P+ T+
Sbjct: 229 ESGHSPNVPTF 239
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 212 ESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGA 271
E G+ A A ++D LC++G E ++ + +G++ E V+Y ++++ CK + A
Sbjct: 127 EGGLIPNAVA-MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 272 ARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEA 331
RI +M+ G P+ Y ++ GL T+ LV+A
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 332 LCHVFDVDKAREVLKLMLRK 351
LC V V++A+ + + +K
Sbjct: 246 LCRVKGVEQAQSAIDTLNQK 265
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 180/454 (39%), Gaps = 14/454 (3%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
Y L+D + R+ A + + + G + L+ G S G A+K+F +M
Sbjct: 120 YRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMR 179
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCR 229
GV N+L + V I + + L+ ++ ++ ++ + +G +A ++ SLC+
Sbjct: 180 HKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEV-KKANLNI-NGSIIALL--ILHSLCK 235
Query: 230 EGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVL 289
+ F I EEL + + Y + ++ G + ++ + +K G P
Sbjct: 236 CSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSD 295
Query: 290 YNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLML 349
Y I L + + L+ ++ V D D A E L M+
Sbjct: 296 YRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV-DPDSAVEFLVYMV 354
Query: 350 RKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCR-ADVITLNTVINGFCKTGSV 408
+ R + L +L S+ +++ + + +I+ CK G V
Sbjct: 355 STGKLPAIRTLS-KLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRV 413
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYN 468
E+ LQ+M + APDV + +I A + A L+ + E G + + TYN
Sbjct: 414 RESYTALQEM-KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE-GCKMNLTTYN 471
Query: 469 ALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWP 528
LIR L + ++ ++ M+ GI D T Y ++EGLC +IE A + +
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Query: 529 SGIHDNF---VYAAILKGLCRSGNFNEACHFLYE 559
H V + + LC +G+ EA L E
Sbjct: 532 D--HKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 62 LASGSVPDHRTCNVL---LARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFC 118
+++G +P RT + L L R +S ++ + L+ S G+ L +Y ++ C
Sbjct: 354 VSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS-----KGYFSELQSYSLMISFLC 408
Query: 119 VFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSL 178
R +++ +MK G P+V Y LI C I A+K++DEM G + N
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 179 TYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFN---E 235
TY+VLIR + +E + E L K+ ER +E + + + +L++ LC+E E
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLER-GIEPDETI----YMSLIEGLCKETKIEAAME 523
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYE 277
VFR E + V + + +LC G A++++ E
Sbjct: 524 VFRKCMERDHKT--VTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/516 (19%), Positives = 196/516 (37%), Gaps = 31/516 (6%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
PSLV R++D F + + + G+ + +SY ++ +
Sbjct: 47 PSLVA--RVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDAL 104
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLW---ERMSVEVESGVKVAAFA 221
F ++ + + +S Y LI ++ GR+ W E S E V
Sbjct: 105 FKQVKSNKILLDSSVYRSLIDTLVL------GRKAQSAFWVLEEAFSTGQEIHPDVCN-- 156
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ L +G ++ ++ ++ +G + +G I C+ + R+V E+KK
Sbjct: 157 RLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKA 216
Query: 282 GF-VPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCD---HTYKVLVEALCHVFD 337
+ ++ I+H L K C R C Y+V+ EA +
Sbjct: 217 NLNINGSIIALLILHSLCK---CSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGN 273
Query: 338 VDKAREVLKLMLRKEGV-DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
+ + + VLK RK GV ++ Y ++ ++ + D L+
Sbjct: 274 LYERQVVLK-KKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILD 332
Query: 397 TVINGFCKTGSVDEALKVLQDML-MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+I G D A++ L M+ GK P + + + + L + D + ++
Sbjct: 333 ALI-GSVSAVDPDSAVEFLVYMVSTGKL--PAIRTLSKLSKNLCRHDKSDHLIKAYE-LL 388
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
G + +Y+ +I L K R +++ M +G+ D + Y ++E C + I
Sbjct: 389 SSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI 448
Query: 516 EEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNI 574
AK W D ++ G N Y +++ L G E+ ++++ G+ P+ Y
Sbjct: 449 RPAKKLW-DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMS 507
Query: 575 LINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
LI C A ++ R+ + + VT R+L
Sbjct: 508 LIEGLCKETKIEAAMEVFRKCMER--DHKTVTRRVL 541
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 202/514 (39%), Gaps = 78/514 (15%)
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVF 165
S+ +++ ++ + P DA ++F +M +R N++S+ L++GY G I +ARKVF
Sbjct: 47 SISSWNSMVAGYFANLMPRDARKLFDEMPDR----NIISWNGLVSGYMKNGEIDEARKVF 102
Query: 166 DEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
D M E N ++++ L++G + ++ L K+ E+ V ++ ++
Sbjct: 103 DLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV---------SWTVMLI 149
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV- 284
++G ++ ++ E +P + ++A MI LCK GR A I EM +R +
Sbjct: 150 GFLQDGRIDDACKLYEMIPDKDNIART----SMIHGLCKEGRVDEAREIFDEMSERSVIT 205
Query: 285 --------------------------PSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXX 318
++V + ++ G ++G +
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 319 XXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXX 378
C+ ++ L ++ KAR V M + + I+ R
Sbjct: 266 IACN----AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 379 XXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGL 438
M + R TL ++++ S+ +V ++ +F DV + +++
Sbjct: 322 ----MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV-DVYVASVLMTMY 376
Query: 439 LDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM-VSDGIGA 497
+ + ++ +F R ++ ++ +N++I G +A V+ M +S
Sbjct: 377 IKCGELVKSKLIFDRFPSKD-----IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 498 DSTTYTIIVEGLCDCDQIEEAKSFWHDV-----IWPSGIHDNFVYAAILKGLCRSGNFNE 552
+ T+ + +EE + + + P H YA ++ L R+G FNE
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH----YACMVDMLGRAGRFNE 487
Query: 553 ACHFLYELVDS-GVSPNIFSYNILIN-CACHLDL 584
A E++DS V P+ + L+ C H L
Sbjct: 488 A----MEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 382 SMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA 441
SM ++ D T +I K+G +D A K+ Q M K P F++++ + A
Sbjct: 303 SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKL-RPSFSVFSSLVDSMGKA 361
Query: 442 TRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTT 501
R+D + ++ M G RP + +LI K + + A ++ M G +
Sbjct: 362 GRLDTSMKVYME-MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 502 YTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELV 561
YT+I+E ++E A + + D+ + Y+ +L+ SG + A +
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPD 603
++G+ P + SY L+ + L A +I+ EMK G + D
Sbjct: 481 NAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 157/420 (37%), Gaps = 79/420 (18%)
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
L +L FC F++ ++ G + +Y L+ + + G A ++++
Sbjct: 253 LAKAEKLEVAFCCFKKAQES----------GCKIDTQTYNNLMMLFLNKGLPYKAFEIYE 302
Query: 167 EMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDS 226
M ++ + TY ++I + + L+ +L ++ ER + + F++LVDS
Sbjct: 303 SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKER-----KLRPSFSVFSSLVDS 357
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
+ + G + ++ E+ G ++ +IDS K G+ A R+ EMKK GF P+
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
LY II K G TY L+E VD A
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSA----- 472
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
+IYN SM + R + + +++
Sbjct: 473 ----------MKIYN--------------------SMTNAGLRPGLSSYISLLTLLANKR 502
Query: 407 SVDEALKVLQDM-LMG---KFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRP 462
VD A K+L +M MG CA DV+ + DA+ VD A R M +G++
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLMIY-----IKDAS-VDLALKWL-RFMGSSGIK- 554
Query: 463 CVVTYNALIR---------GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
T N +IR GLY RP + ++V D YT I+ L C
Sbjct: 555 ---TNNFIIRQLFESCMKNGLYDSARP-----LLETLVHSAGKVDLVLYTSILAHLVRCQ 606
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 42/289 (14%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
+ L + + A CF + SG D +T N L+ L P + + + S+
Sbjct: 250 IQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDS 309
Query: 102 GF--------VPSLVNYHRLMDQFCVFR-------RPC------------------DAHR 128
+PSL RL F +F+ RP + +
Sbjct: 310 LLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMK 369
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVL 188
++ +M+ GH P+ + +LI+ Y G + A +++DEM +SG PN Y+++I
Sbjct: 370 VYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHA 429
Query: 189 QERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS 248
+ LE + + + + S ++ L++ G + +I + G
Sbjct: 430 KSGKLEVAMTVFKDMEKAGFLPTPS-----TYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 249 LAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFV----PSDVLYNYI 293
Y ++ L A +I+ EMK G+ SDVL YI
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI 533
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
++ VI L A +++ AF F + E+G + TYN L+ P AF +Y S
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQ-ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSG 548
M D +TY +I+ L +++ A + + + +F V+++++ + ++G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMK-ERKLRPSFSVFSSLVDSMGKAG 362
Query: 549 NFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWR 608
+ + E+ G P+ + LI+ A ++ EMKK+G P+ +
Sbjct: 363 RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 609 IL---HKIQGKV 617
++ H GK+
Sbjct: 423 MIIESHAKSGKL 434
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D ++ N+VI G+ K G +D AL + + M + +S+TT+ISG + A EA L
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKM-----AEKNAISWTTMISGYVQADMNKEALQL 234
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
FH M + + P V+ + +L ++S + I DS ++++
Sbjct: 235 FHE-MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
C ++EEA + ++ S + A++ G G+ EA E+ G+ PN+
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKN-GLNP 602
++ ++ + L E I M+++ L P
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 16/218 (7%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DV +N++IN + TG+ L +L + PD VS+ +VI G + A ++D A L
Sbjct: 149 DVYAVNSLINSYAVTGNFK-----LAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F ++ +N +++ +I G + +A ++ M + + D+ + +
Sbjct: 204 FRKMAEKNA-----ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL-CRSGNFNEACHFLYELVDSGVSPNI 569
+E+ K + H + + I + V +L + + G EA + V
Sbjct: 259 QLGALEQGK-WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ--- 314
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
++ LI+ + EA EM+K G+ P+ +T+
Sbjct: 315 -AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 323 HTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXS 382
H ++L + H + KA E+ K + TR YN+ ++A
Sbjct: 156 HLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
MLE DV + +I GFC+ G V+ A+++L DML F PD T+I GL D
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV-PD----RTLIGGLCDQG 270
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
DE M G P N L++G + +A V ++ +G S T+
Sbjct: 271 MFDEGKKYLEE-MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 329
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVI 526
+++ +C+ D+ E+ K F D +
Sbjct: 330 EMVIPLICNEDESEKIKLFLEDAV 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 444 VDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
+ +AF+LF + +G+ P +YN L++ + A+ ++ M+ + D +Y
Sbjct: 171 LQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYK 229
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
I+++G C Q+ A D++ + D ++ GLC G F+E +L E++
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISK 285
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G SP+ N L+ C EA +V + KNG TW ++
Sbjct: 286 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 332
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 103 FVPSLVNYHRLMDQFCVFRRPCD-AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
F P + +R++D R A +F + G PN SY L+ +C + A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
++F +MLE V P+ +Y +LI+G ++ + G EL+ + + V +
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT-------- 261
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ LC +G F+E + EE+ +G V ++ C G+ A +V + K
Sbjct: 262 -LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 282 G 282
G
Sbjct: 321 G 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 417 DMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYK 476
++LM FC D +S A+ LF +++ E + P V +Y LI+G +
Sbjct: 194 NLLMQAFCLNDDLSI---------------AYQLFGKML-ERDVVPDVDSYKILIQGFCR 237
Query: 477 LKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF- 535
+ N A + M++ G D T ++ GLCD +E K + ++I G +F
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMI-SKGFSPHFS 292
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
V ++KG C G EAC + ++ +G + + ++ ++I C+ D +SE ++ E
Sbjct: 293 VSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNED-ESEKIKLFLE 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Query: 156 GGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGV 215
G + A ++F GV PN+ +Y++L++ DL +L K+ ER V
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP----- 223
Query: 216 KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
V ++ L+ CR+G N + +++ +G + + + G LC G + + +
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIG----GLCDQGMFDEGKKYL 279
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
EM +GF P + N ++ G G T+++++ +C+
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 339
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNI 362
+ +K + L+ +++E TRI ++
Sbjct: 340 DESEKIKLFLEDAVKEEITGDTRIVDV 366
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 150/363 (41%), Gaps = 13/363 (3%)
Query: 252 EVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXX 311
E + + L ++ + A + M+ G P+ N + L ++GD + +
Sbjct: 107 EETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFE 166
Query: 312 XXXXXXXXXCDHTYKVLVEALCHVFDVDKA----REVLKLMLRKEGVDKTRIYNIYLRAX 367
HTY ++++A+ V + A RE+ + R+ D +YN +
Sbjct: 167 FMRKKENVT-GHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVV-LYNTAISLC 224
Query: 368 XXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPD 427
M IT + +++ F + G + AL V +M+ K +
Sbjct: 225 GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 428 VVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVY 487
+ +IS + D A +F M + G++P +V N LI L K + F VY
Sbjct: 285 DAMYA-MISACTKEEKWDLALKIFQS-MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVY 342
Query: 488 SSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGI--HDNFVYAAILKGLC 545
S + S G D T+ ++ L ++ E+ + D+I + + ++Y +
Sbjct: 343 SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLF-DMIRSENLCCLNEYLYNTAMVSCQ 401
Query: 546 RSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE-MKKNGLNPDC 604
+ G + +A LYE+ SG++ + SYN++I+ AC KS+ +V E M + P+
Sbjct: 402 KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVIS-ACEKSRKSKVALLVYEHMAQRDCKPNT 460
Query: 605 VTW 607
T+
Sbjct: 461 FTY 463
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 189/483 (39%), Gaps = 62/483 (12%)
Query: 35 QHSIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVR 94
+ +++ L L ++ A + F G P+ CN L+ LLR+ +Q V
Sbjct: 107 EETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRN-GDIQKAFTVF 165
Query: 95 SLIVAKPGFVPSLVNYHRLMDQFCVFRRPCD-AHRIFFDMK---NRGHCPNVVSYTTLIN 150
+ K + + LM + + C+ A R+F +++ R C +VV Y T I+
Sbjct: 166 EFMRKKENVTG---HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAIS 222
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
+ + + +++ M G +TYS+L+ S+
Sbjct: 223 LCGRINNVYETERIWRVMKGDGHIGTEITYSLLV-----------------------SIF 259
Query: 211 VESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHG 270
V G A ++ D + N++ SL E+ +Y MI + K ++
Sbjct: 260 VRCGRSELAL-DVYDEMVN----NKI-----------SLREDAMYA-MISACTKEEKWDL 302
Query: 271 AARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
A +I M K+G P+ V N +I+ L K G ++ ++T+ L+
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 331 ALCHVFDVDKAREVLKL--MLRKEGV--DKTRIYNIYLRAXXXXXXXXXXXXXXXSMLES 386
AL + ++ +VL+L M+R E + +YN + + M S
Sbjct: 363 AL---YKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Query: 387 QCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
+ N VI+ K+ AL V + M + C P+ ++ +++ + + DE
Sbjct: 420 GLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQ-RDCKPNTFTYLSLVRSCIWGSLWDE 478
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
D+ +V P+ V YNA I G+ + A +Y M G+ D T +++
Sbjct: 479 VEDILKKVEPD------VSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMML 532
Query: 507 EGL 509
+ L
Sbjct: 533 QNL 535
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D+ T N +I C++GS + ++ +M K+ P SF +I G + DE +
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEM-ERKWIKPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
R+M E G+ V TYN +I+ L K K+ +A + ++S + +S TY++++ G C
Sbjct: 240 M-RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ ++EA + + ++ D+ Y ++ LC+ G+F A E ++ P+
Sbjct: 299 SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFS 358
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKN 598
L+N EA +++ +K+
Sbjct: 359 VMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P L Y+R++ C ++ I +M+ + P S+ +I+G+ +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
RKV M E GV TY+++I+ + + + + L+ + MS + ++
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGV---MSCRMRPNS--VTYS 291
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ C E +E + E + C G + Y +I LCK G + A + E ++
Sbjct: 292 LLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEK 351
Query: 282 GFVPSDVLYNYIIHGLT 298
+VPS + ++++GL
Sbjct: 352 NWVPSFSVMKWLVNGLA 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 6/228 (2%)
Query: 125 DAHRIFFDM-KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVL 183
+A+R++ +M K G P++ +Y +I C G + + EM ++P + ++ ++
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 184 IRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
I G +E + R++M RM E V VA + ++ LC+ E + + +
Sbjct: 224 IDGFYKEEKFDEVRKVM-----RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGV 278
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDC 303
V Y +I C A + M G+ P Y +IH L K GD
Sbjct: 279 MSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
Query: 304 MRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK 351
K LV L VD+A+E++ ++ K
Sbjct: 339 ETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 102/497 (20%), Positives = 192/497 (38%), Gaps = 70/497 (14%)
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
R +AH +F R + SY +L+ G+ G +A+++F + G+E + +S
Sbjct: 42 RLYNAHNLFDKSPGR----DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+++ D GR+L C+ + ++ V+ +LVD+ + F + ++ +
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDG 301
E+ + V + +I + + M+ G P+ + + L ++G
Sbjct: 153 EMKERNV----VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 302 DCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYN 361
RG Q L+ +V KAR ++ K V +N
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR----ILFDKTEVKSVVTWN 264
Query: 362 IYLRAXXXXXXXXXXXXXXXSM------LESQCRADVITL-------------------- 395
+ SM L A VI L
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 396 ---------NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDE 446
++ + K ++ +AL++ +++ C +VVS+T +ISG L +E
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEI----GCVGNVVSWTAMISGFLQNDGKEE 380
Query: 447 AFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIV 506
A DLF M G+RP TY+ ++ L + P++ V++ +V ST T ++
Sbjct: 381 AVDLFSE-MKRKGVRPNEFTYSVILTALPVIS-PSE---VHAQVVKTNYERSSTVGTALL 435
Query: 507 EGLCDCDQIEEAKSFWHDVIWPSGIHDN--FVYAAILKGLCRSGNFNEACHFLYELVDSG 564
+ ++EEA + SGI D ++A+L G ++G A EL G
Sbjct: 436 DAYVKLGKVEEAAKVF------SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 565 VSPNIFSYNILIN-CAC 580
+ PN F+++ ++N CA
Sbjct: 490 IKPNEFTFSSILNVCAA 506
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 149/379 (39%), Gaps = 78/379 (20%)
Query: 106 SLVNYHRLMDQ-----FCVFRRPC----DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
S+V Y L DQ V C DA R+F K G NVVS+T +I+G+
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF---KEIGCVGNVVSWTAMISGFLQND 376
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
G +A +F EM GV PN TYSV++ + E +++ +ER S V
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSST-----VG 431
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVY 276
A L+D+ + G E ++ + + + V + M+ + G A ++
Sbjct: 432 TA----LLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 277 EMKKRGFVPSDVLYNYIIHGLTKDGDCM-RGYQXXXXXXXXXXXXCDHTYKV---LVEAL 332
E+ K G P++ ++ I++ M +G Q H + + L +L
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-------------HGFAIKSRLDSSL 530
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
C L M K+G NI + + Q D+
Sbjct: 531 C-------VSSALLTMYAKKG-------NI---------------ESAEEVFKRQREKDL 561
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA---FD 449
++ N++I+G+ + G +AL V ++M K D V+F V + A V+E FD
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRK-VKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 450 LFHR---VMPENGLRPCVV 465
+ R + P C+V
Sbjct: 621 IMVRDCKIAPTKEHNSCMV 639
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 207/530 (39%), Gaps = 99/530 (18%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
GF + + +++ +C DA +F M+ R ++VS+ T+I+GY SVG + +
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEI 229
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
K+ M G+ P+ T+ + DLE GR L C++ + +V+ +K A
Sbjct: 230 LKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI-VKTGFDVDMHLKTA--- 285
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
L+ + G +R+ E +P + + V + MI L ++GR A + EM +
Sbjct: 286 -LITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 282 GFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDK- 340
G S ++ + G G H Y L H + +D
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASV-------------HGY-----VLRHGYTLDTP 382
Query: 341 AREVLKLMLRKEG-VDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A L M K G +DK+ + + E D+++ N +I
Sbjct: 383 ALNSLITMYAKCGHLDKSLV-----------------------IFERMNERDLVSWNAII 419
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF---DLFHRVMP 456
+G+ + + +AL + ++M KF V TV+S LL A A L H ++
Sbjct: 420 SGYAQNVDLCKALLLFEEM---KFKTVQQVDSFTVVS-LLQACSSAGALPVGKLIHCIVI 475
Query: 457 ENGLRPC-------------------------------VVTYNALIRGLYKLKRPNDAFG 485
+ +RPC VV++ LI G + + A
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 486 VYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVY-AAILKGL 544
+YS + G+ + + ++ +++ + ++ G+ N + A ++ L
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLL 595
Query: 545 CRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
CR+ +A F E + P+I I+++ AC + K+E I+ E
Sbjct: 596 CRAKRIEDAFKFYKE---NFTRPSIDVLGIILD-ACRANGKTEVEDIICE 641
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 25/330 (7%)
Query: 128 RIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGV 187
R +FD R +VVS+ +++GY G DA ++F++ML GV PN T+ ++I
Sbjct: 218 RKYFD---RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 188 LQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD--SLCREGFFNEVFRIAEELPC 245
D R L+ KL + V + VK A L+D + CR+ RI EL
Sbjct: 275 SFRADPSLTRSLV-KLIDEKRVRLNCFVKTA----LLDMHAKCRD--IQSARRIFNELGT 327
Query: 246 QGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMR 305
Q +L V + MI ++G A ++ M KR V +N +I G +G
Sbjct: 328 QRNL---VTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS----WNSLIAGYAHNGQAAL 380
Query: 306 GYQXXXXXXXXXXXXCDHTYKVLVEALC-HVFDVDKAREVLKLMLRKEGVDKTRIYNIYL 364
+ D + V + C H+ D++ ++ +RK ++ ++ +
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY-IRK---NQIKLNDSGY 436
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
R+ + + DV++ NT+ F G E L +L M +
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM-KDEGI 495
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRV 454
PD V++T+V++ A + E +F +
Sbjct: 496 EPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 55/248 (22%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
N +I+G+ K G+ +EA K+ DM+ DVVS+T +I+G ++ A F R M
Sbjct: 171 NVMISGYWKWGNKEEACKLF-DMM----PENDVVSWTVMITGFAKVKDLENARKYFDR-M 224
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG------- 508
PE VV++NA++ G + DA +++ M+ G+ + TT+ I++
Sbjct: 225 PEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 509 --------LCD--------------------CDQIEEAKSFWHDVIWPSGIHDNFV-YAA 539
L D C I+ A+ ++++ G N V + A
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL----GTQRNLVTWNA 336
Query: 540 ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
++ G R G+ + A +L D+ N+ S+N LI H + A + +M G
Sbjct: 337 MISGYTRIGDMSSA----RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 600 -LNPDCVT 606
PD VT
Sbjct: 393 DSKPDEVT 400
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/604 (18%), Positives = 238/604 (39%), Gaps = 76/604 (12%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDH-RTCNVLLARLLRSRTPLQTWALVRSLIVAK 100
+++LC SN + EA + F + + S RT L+ SR+ Q + ++ +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 101 PGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGD 160
+ L N+ M C R DA +F M R N+VSYT++I GY G +
Sbjct: 98 CKYDTILNNHILSMYGKCGSLR--DAREVFDFMPER----NLVSYTSVITGYSQNGQGAE 151
Query: 161 ARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF 220
A +++ +ML+ + P+ + +I+ D+ G++L ++ +++ES + A
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV-----IKLESSSHLIAQ 206
Query: 221 ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
L+ R ++ R+ +P + + + + +I ++G A + EM
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIP----MKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 281 RG-FVPSDVLYNYIIHG----LTKD-GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
G F P++ ++ + L D G + G C +LC
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC---------SLCD 313
Query: 335 VFD----VDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRA 390
++ ++ AR V + R + T +N+ + M S
Sbjct: 314 MYARCGFLNSARRVFDQIERPD----TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 391 DVITLNTVINGFCKTGSVDEALKV---------LQD-------MLMGKFCA--------- 425
D I+L +++ K ++ + +++ L D + M FC+
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 426 ------PDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKR 479
D VS+ T+++ L + E LF ++M + P +T L+RG ++
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 480 PNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAA 539
V+ + G+ + +++ C + +A+ + + D ++
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM----DNRDVVSWST 544
Query: 540 ILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMK-KN 598
++ G +SG EA E+ +G+ PN ++ ++ H+ L E ++ M+ ++
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 599 GLNP 602
G++P
Sbjct: 605 GISP 608
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 37 SIATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSL 96
S T L A + E + F + L S PDH T + LLR + + L +
Sbjct: 440 SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT----MGNLLRGCVEISSLKLGSQV 495
Query: 97 --IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS 154
K G P + L+D + A RIF M NR +VVS++TLI GY
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQ 551
Query: 155 VGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESG 214
G +A +F EM +G+EPN +T+ GVL G E KL+ M E
Sbjct: 552 SGFGEEALILFKEMKSAGIEPNHVTFV----GVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKV-GRYHGAAR 273
+ +VD L R G NE R +E+ L +VV + + S CK G H A +
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMK----LEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 274 IVYEMKK 280
+ K
Sbjct: 664 AAENILK 670
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 169/450 (37%), Gaps = 55/450 (12%)
Query: 107 LVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFD 166
L+ + L+ + F + DA R+F+ + + +++S++++I G+ +G +A
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMK----DLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 167 EMLESGV-EPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVD 225
EML GV PN + ++ + G ++ + ++ E A +L D
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-----HGLCIKSELAGNAIAGCSLCD 313
Query: 226 SLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVP 285
R GF N R+ +++ + + V+ I L G A + +M+ GF+P
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVI----IAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 286 SDVLYNYIIHGLTKDGDCMRGYQXXX--------------XXXXXXXXXCDHTY------ 325
+ ++ TK +G Q C Y
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 326 -------------KVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXX 372
+L L H V+ R + KLML E LR
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLR-LFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 373 XXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFT 432
L++ + N +I+ + K GS+ +A ++ M DVVS++
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM-----DNRDVVSWS 543
Query: 433 TVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVS 492
T+I G + +EA LF + M G+ P VT+ ++ + + +Y++M +
Sbjct: 544 TLIVGYAQSGFGEEALILF-KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 493 D-GIGADSTTYTIIVEGLCDCDQIEEAKSF 521
+ GI + +V+ L ++ EA+ F
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERF 632
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/516 (19%), Positives = 203/516 (39%), Gaps = 37/516 (7%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V K G +L+ FC + +A R+F + ++ + V Y T++ G+ V
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN----VLYHTMLKGFAKVS 114
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
+ A + F M VEP ++ L++ E +L G+E+ L V+SG
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL-------VKSGFS 167
Query: 217 VAAFANL----VDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAA 272
+ FA + + CR+ NE ++ + +P + + V + ++ + G A
Sbjct: 168 LDLFAMTGLENMYAKCRQ--VNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMAL 221
Query: 273 RIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEAL 332
+V M + PS + ++ ++ G + + LV+
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 333 CHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADV 392
++ AR++ ML + V +N + A ML+ +
Sbjct: 282 AKCGSLETARQLFDGMLERNVVS----WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
+++ ++ G ++ + + + + +V ++IS VD A +F
Sbjct: 338 VSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 453 RVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
++ +V++NA+I G + RP DA +S M S + D+ TY ++ + +
Sbjct: 397 KLQSRT-----LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 513 DQIEEAKSFWHDVIWPSGIHDN-FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS 571
AK + H V+ S + N FV A++ + G A + D ++ +
Sbjct: 452 SITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCG----AIMIARLIFDMMSERHVTT 506
Query: 572 YNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+N +I+ A ++ EM+K + P+ VT+
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 107/524 (20%), Positives = 189/524 (36%), Gaps = 47/524 (8%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ K GF L L + + R+ +A ++F M R ++VS+ T++ GY G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNG 215
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A ++ M E ++P+ +T ++ V R + G+E+ M +S V
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY---AMRSGFDSLVN 272
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVV-YGQMIDSLCKVGRYHGAARIV 275
++ LVD + G ++ + G L VV + MID+ + A I
Sbjct: 273 IST--ALVDMYAKCGSLETARQLFD-----GMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 276 YEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHV 335
+M G P+DV +H GD RG L+ C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 336 FDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITL 395
+VD A + + + V +N + M + D T
Sbjct: 386 KEVDTAASMFGKLQSRTLVS----WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVM 455
+VI + S+ K + ++M + C V TT + + L +M
Sbjct: 442 VSVITAIAEL-SITHHAKWIHGVVM-RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 456 PENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI 515
E V T+NA+I G A ++ M I + T+ ++ +
Sbjct: 500 SERH----VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 516 EEA-KSFWHDVIWPSGIHDNFV-------YAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
E K F+ + +N+ Y A++ L R+G NEA F+ ++ V P
Sbjct: 556 EAGLKCFYM-------MKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM---PVKP 605
Query: 568 NIFSYNILIN-CACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
+ Y ++ C H ++ R + LNPD + +L
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFE---LNPDDGGYHVL 646
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/514 (20%), Positives = 200/514 (38%), Gaps = 35/514 (6%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V K GF + L+ + A IF +M R + V+Y TLING G
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCG 368
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL---MCKLWERMSVEVES 213
A ++F M G+EP+S T + L+ + L G++L KL + ++E
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE- 427
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
G + +A D +F E + V++ M+ + + + R
Sbjct: 428 GALLNLYAKCADIETALDYFLET-----------EVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
I +M+ VP+ Y I+ + GD G Q + VL++
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 334 HVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVI 393
+ +D A ++L K+ V T + Y + ML+ R+D +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ----YNFDDKALTTFRQMLDRGIRSDEV 592
Query: 394 TLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHR 453
L ++ ++ E ++ + F + D+ +++ +++E++ F +
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGF-SSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 454 VMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCD 513
+ + +NAL+ G + +A V+ M +GI ++ T+ V+ +
Sbjct: 652 TEAGDN-----IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 514 QIEEAKSFWHDVIWPSGI-HDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
+++ K H VI +G + V A++ + G+ ++A E+ + N S+
Sbjct: 707 NMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS----TKNEVSW 761
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
N +IN SEA +M + + P+ VT
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 106/548 (19%), Positives = 195/548 (35%), Gaps = 68/548 (12%)
Query: 126 AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIR 185
A R+F ++ + H S+ +I+G +A ++F +M G+ P +S ++
Sbjct: 241 ARRVFDGLRLKDHS----SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 186 GVLQERDLEGGREL---MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEE 242
+ LE G +L + KL V + + V+ + +L + + E F+ +
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL-VSLYFHLGNLISAEHIFSNM------ 349
Query: 243 LPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGD 302
S + V Y +I+ L + G A + M G P ++ + DG
Sbjct: 350 -----SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 303 CMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNI 362
RG Q + L+ D++ A L L E V+ ++N+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA---LDYFLETE-VENVVLWNV 460
Query: 363 YLRAXXXXXXXXXXXXXXXSM--------------------------LESQCRADVITLN 396
L A M L Q + +I N
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 397 TVINGF---------CKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEA 447
+N + K G +D A +L +F DVVS+TT+I+G D+A
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILI-----RFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 448 FDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVE 507
F R M + G+R V + L+ + +++ G +D +V
Sbjct: 576 LTTF-RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 508 GLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSP 567
C +IEE+ + + DN + A++ G +SGN EA + G+
Sbjct: 635 LYSRCGKIEES----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 568 NIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVRKQTLSEYQS 627
N F++ + A + Q+ + K G + + L + K + +E Q
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 628 LSINYEGQ 635
L ++ + +
Sbjct: 751 LEVSTKNE 758
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 10/227 (4%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT---RVD 445
R + T +I+ C+ G VD A ++++ M V+ + S LL + +
Sbjct: 176 RLEESTFGILIDALCRIGEVDCATELVRYM-----SQDSVIVDPRLYSRLLSSVCKHKDS 230
Query: 446 EAFDL--FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYT 503
FD+ + + + P + Y ++R L + R + V + M D + D YT
Sbjct: 231 SCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 504 IIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDS 563
I+++G+ + +A + +++ D + Y + GLC+ + A + +
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 564 GVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
G PN+ +YNILI S A + +EM+ NG+N + T+ I+
Sbjct: 351 GSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIM 397
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 120/315 (38%), Gaps = 35/315 (11%)
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRG 306
G EE +G +ID+LC++G A +V M + + LY+ ++ +
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV--------- 224
Query: 307 YQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRA 366
C H + + ++ D+ K R L R Y + +R
Sbjct: 225 --------------CKHKDSSCFDVIGYLEDLRKTRFSPGL----------RDYTVVMRF 260
Query: 367 XXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAP 426
M + D++ V+ G +A K+ D L+ AP
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF-DELLLLGLAP 319
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
DV ++ I+GL ++ A + M + G P VVTYN LI+ L K + A +
Sbjct: 320 DVYTYNVYINGLCKQNDIEGALKMMSS-MNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 378
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
+ M ++G+ +S T+ I++ + D++ A + + + ++ LC
Sbjct: 379 WKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCE 438
Query: 547 SGNFNEACHFLYELV 561
G ++A L LV
Sbjct: 439 KGLMDQAVELLAHLV 453
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P LV Y ++ A ++F ++ G P+V +Y ING C I A K+
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES------GVKVA 218
M + G EPN +TY++LI+ +++ DL + LW+ M + + ++
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK----TLWKEMETNGVNRNSHTFDIMIS 399
Query: 219 AFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIV 275
A+ + + +C G E F + + + S EEV I LC+ G A ++
Sbjct: 400 AYIEVDEVVCAHGLLEEAFNM--NVFVKSSRIEEV-----ISRLCEKGLMDQAVELL 449
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 118/304 (38%), Gaps = 30/304 (9%)
Query: 48 SNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVA--KPGFVP 105
S R EA + F VP T N LL L+R R Q+ LV ++V + G
Sbjct: 121 SGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKR---QSLELVPEILVKACRMGVRL 177
Query: 106 SLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCS---------VG 156
+ L+D C A + M + Y+ L++ C +G
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG 237
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGR--ELMCKLWERMSVEVESG 214
+ D RK + P Y+V++R ++ EGGR E++ L + VE
Sbjct: 238 YLEDLRK-------TRFSPGLRDYTVVMRFLV-----EGGRGKEVVSVLNQMKCDRVEPD 285
Query: 215 VKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ + ++ + + + + ++ +EL G + Y I+ LCK GA ++
Sbjct: 286 L--VCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ M K G P+ V YN +I L K GD R HT+ +++ A
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
Query: 335 VFDV 338
V +V
Sbjct: 404 VDEV 407
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 46/287 (16%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L LC ++A + SL PD +T N+LL S A +
Sbjct: 187 LRTLCQEKSMTDARNVYH-SLKHQFQPDLQTFNILL-----SGWKSSEEAEAFFEEMKGK 240
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLING---------- 151
G P +V Y+ L+D +C R A+++ M+ P+V++YTT+I G
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 152 -------------------------YCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+C +GDA K+ DEM++ G+ PN+ TY++ R
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+ DL EL ++ + E + F L+ R + R+ E++ +
Sbjct: 361 LSLANDLGRSWELYVRM---LGNECLPNTQSCMF--LIKMFKRHEKVDMAMRLWEDMVVK 415
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYI 293
G + +V ++D LC + + A + + EM ++G PS+V + I
Sbjct: 416 GFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 6/185 (3%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D N ++ C+ S+ +A V L +F PD+ +F ++SG + E +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHS-LKHQF-QPDLQTFNILLSGW----KSSEEAEA 232
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F M GL+P VVTYN+LI K + A+ + M + D TYT ++ GL
Sbjct: 233 FFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
Q ++A+ ++ D Y A ++ C + +A + E+V G+SPN
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 571 SYNIL 575
+YN+
Sbjct: 353 TYNLF 357
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
+ DV+T N++I+ +CK +++A K++ D + + PDV+++TTVI GL + D+A
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLI-DKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
++ + M E G P V YNA IR +R DA + MV G+ ++TTY +
Sbjct: 302 EVL-KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 509 LC------------------DC-----------------DQIEEAKSFWHDVIWPSGIHD 533
L +C ++++ A W D++
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYN 573
+ V +L LC EA L E+V+ G P+ S+
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFK 460
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 427 DVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGV 486
D F ++ L + +A +++H + ++ +P + T+N L+ G K +A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL--KHQFQPDLQTFNILLSGW---KSSEEAEAF 233
Query: 487 YSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCR 546
+ M G+ D TY +++ C +IE+A + D Y ++ GL
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 547 SGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
G ++A L E+ + G P++ +YN I C +A ++V EM K GL+P+ T
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 607 WRILHKI 613
+ + ++
Sbjct: 354 YNLFFRV 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 162/425 (38%), Gaps = 75/425 (17%)
Query: 72 TCNVLLARLLRSRTPLQTWALV-------RSLIVAKP-----GFVPSLVNYHRLMDQFCV 119
+ + +L L R+R Q W L+ RSLI + G V L + + ++ F
Sbjct: 110 SLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWK 169
Query: 120 FRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLT 179
F+R FFD + L+ C + DAR V+ L+ +P+ T
Sbjct: 170 FKRLVPD---FFD---------TACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQT 216
Query: 180 YSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK--VAAFANLVDSLCREGFFNEVF 237
+++L+ G + E E M G+K V + +L+D C++ + +
Sbjct: 217 FNILLSGWKSSEEAEAFFEEMKG----------KGLKPDVVTYNSLIDVYCKDREIEKAY 266
Query: 238 RIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGL 297
++ +++ + + + Y +I L +G+ A ++ EMK+ G P YN I
Sbjct: 267 KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRN- 325
Query: 298 TKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKT 357
C + A +++ M++K
Sbjct: 326 ----------------------------------FCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 358 RIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQD 417
YN++ R ML ++C + + +I F + VD A+++ +D
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWED 411
Query: 418 MLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKL 477
M++ F + +VS + A +V+EA M E G RP V++ I+ L +L
Sbjct: 412 MVVKGFGSYSLVSDVLLDLLCDLA-KVEEAEKCLLE-MVEKGHRPSNVSFKR-IKLLMEL 468
Query: 478 KRPND 482
+D
Sbjct: 469 ANKHD 473
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 187/457 (40%), Gaps = 38/457 (8%)
Query: 154 SVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
S + ARKVFDE+ +PNS ++ LIR G + + +W + + ES
Sbjct: 76 SFASLEYARKVFDEI----PKPNSFAWNTLIRA------YASGPDPVLSIWAFLDMVSES 125
Query: 214 GV--KVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEV-VYGQMIDSLCKVGRYHG 270
F L+ + + + + + + ++ +V V +I G
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLS-LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDS 184
Query: 271 AARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVE 330
A ++ +K++ V +N +I+G + G + + T ++
Sbjct: 185 ACKVFTTIKEKDVVS----WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 331 ALCHVFDVDKAREVLKLMLRKEGVDKTRI-YNIYL-RAXXXXXXXXXXXXXXXSMLESQC 388
A + +++ R+V +++ R+ N+ L A + ++
Sbjct: 241 ACAKIRNLEFGRQVCSY------IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 389 RADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAF 448
D +T T+++G+ + + A +VL M D+V++ +IS + +EA
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ-----KDIVAWNALISAYEQNGKPNEAL 349
Query: 449 DLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG 508
+FH + + ++ +T + + ++ ++S + GI + + ++
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 509 LCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPN 568
C +E+++ ++ V D FV++A++ GL G NEA Y++ ++ V PN
Sbjct: 410 YSKCGDLEKSREVFNSV----EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 569 IFSYNILINCAC-HLDLKSEAYQIVREMKKN-GLNPD 603
++ + CAC H L EA + +M+ N G+ P+
Sbjct: 466 GVTFTNVF-CACSHTGLVDEAESLFHQMESNYGIVPE 501
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 109/534 (20%), Positives = 207/534 (38%), Gaps = 51/534 (9%)
Query: 67 VPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKPGFVPSLVNYHRLMDQFCVFRRPCDA 126
+P+ R V + R+ +R L + K G +L+ + L+D +C R P A
Sbjct: 2 IPNQRQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 127 HRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
+++F M R NVVS++ L++G+ G + + +F EM G+ PN T+S ++
Sbjct: 61 YKVFDSMPER----NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKA 116
Query: 187 VLQERDLEGGREL--MC-KLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEEL 243
LE G ++ C K+ M VEV + +LVD + G NE ++ +
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGN--------SLVDMYSKCGRINEAEKVFRRI 168
Query: 244 PCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG--------FVPSDVLYNYIIH 295
+ ++ + MI G Y A + M + F + +L
Sbjct: 169 VDRSLIS----WNAMIAGFVHAG-YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 223
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
G+ G + G+ + L ++F KA + +K +
Sbjct: 224 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK--------E 275
Query: 356 KTRI-YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKV 414
KT I ++ + + E + D L+++I F + + K
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQ 334
Query: 415 LQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGL 474
+Q + + + +V+ L VDEA F + ++ V+++ +I G
Sbjct: 335 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKD-----VISWTVVITGY 389
Query: 475 YKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDN 534
K + ++ M+ I D Y ++ I+E + + ++ GI
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPR 449
Query: 535 FV-YAAILKGLCRSGNFNEACHFLYELVDS-GVSPNIFSYNILIN-CACHLDLK 585
YA ++ L R+G EA H L+D+ + PN+ + L++ C H D++
Sbjct: 450 VEHYACVVDLLGRAGRLKEAKH----LIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+A + F +M+ + +V+S+T +I GY G + ++F EML +EP+ + Y ++
Sbjct: 366 EAEKCFAEMQLK----DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELP 244
++ G EL KL E ++ +V +A +VD L R G E + + +P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIK----PRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 245 CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKK 280
+ V Q + SLC+V HG + E+ K
Sbjct: 478 ----IKPNVGIWQTLLSLCRV---HGDIELGKEVGK 506
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 8/218 (3%)
Query: 388 CRADVITLNTVINGFC-KTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDA-TRVD 445
C V N +I C + + A V ML PD+ ++T ++S LL +++
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLN 198
Query: 446 EAFDLFHRV------MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
+ H V M NG+ P N +I+ K ++A V+ M G ++
Sbjct: 199 VCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNA 258
Query: 500 TTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYE 559
TY+ +V+G+C+ ++ + F+ ++ + + Y ++ L +EA +Y+
Sbjct: 259 YTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYD 318
Query: 560 LVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK 597
++ + +SP++ +YN ++ C SEA ++V E KK
Sbjct: 319 MLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 132 DMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQER 191
MK+ G P+ +I Y + +A +VF EM G EPN+ TYS L++GV ++
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 192 DLEGGRELMCKLWERMSVE--VESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL 249
+ G ++ M V+ V +G + + L+ SL E +E + ++
Sbjct: 273 RVGQG----LGFYKEMQVKGMVPNG---SCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKR 281
+ + Y ++ LC+ GR A +V E KKR
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 93 VRSLI--VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLIN 150
VRSL + G +P + ++ + +A R+F +M G PN +Y+ L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 151 GYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVE 210
G C G +G + EM G+ PN Y VLI + ER L+ E+ +++ ++
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEV---VYDMLANS 323
Query: 211 VESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSL 262
+ + + ++ LCR G +E + EE + + E Y ++D +
Sbjct: 324 LSP--DMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 437 GLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIG 496
L R DEA ++ + M G P +TY+ L+ GL K KR +A GV M + G
Sbjct: 379 SLTSVGRFDEAEEI-TKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 497 ADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHF 556
D T+TI+++G C +++++A + + +++ D+ + ++ G F A F
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 557 LYELV-DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNG 599
L E+V ++ V P +Y +LI+ + EA +++ MKK
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 114/327 (34%), Gaps = 83/327 (25%)
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
VFR++ + G + VY + SL VGR+ A I M+ G+ P ++
Sbjct: 354 VFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNI------- 406
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
TY LV LC +++AR VL M
Sbjct: 407 ----------------------------TYSQLVFGLCKAKRLEEARGVLDQM------- 431
Query: 356 KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQ-CRADVITLNTVINGFCKTGSVDEALKV 414
E+Q C D+ T +I G CK +D+AL
Sbjct: 432 -----------------------------EAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 415 LQDMLMGKFCAPDVVS--FTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIR 472
+ML F D+ S +I G + + + A ++ ++P TY LI
Sbjct: 463 FANMLEKGF---DIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLID 519
Query: 473 GLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEG-LCDCDQIEEAKSFWHDVIWPSGI 531
L K+K+ +A + M A Y +G L +E+AK F DV+
Sbjct: 520 KLLKIKKSEEALDLLQMMKKQNYPA----YAEAFDGYLAKFGTLEDAKKFL-DVLSSKDS 574
Query: 532 HDNFVYAAILKGLCRSGNFNEACHFLY 558
Y +++ R G +A + L+
Sbjct: 575 PSFAAYFHVIEAFYREGRLTDAKNLLF 601
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 125 DAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLI 184
+A I M+N G+ P+ ++Y+ L+ G C + +AR V D+M G P+ T+++LI
Sbjct: 388 EAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILI 447
Query: 185 RGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREG---FFNEVFRIAE 241
+G + +L+ + E+ +++S + V EG F E+ + A
Sbjct: 448 QGHCKNNELDKALACFANMLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGF 283
P Q + Y +ID L K+ + A ++ MKK+ +
Sbjct: 507 VKPWQST------YKLLIDKLLKIKKSEEALDLLQMMKKQNY 542
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G+ P + Y +L+ C +R +A + M+ +G P++ ++T LI G+C + A
Sbjct: 400 GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFA 221
F MLE G + +S VLI G + EG + ++ + +V+ + +
Sbjct: 460 LACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQ----STYK 515
Query: 222 NLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDS-LCKVGRYHGAARIVYEMKK 280
L+D L + E + + + Q A Y + D L K G A + + +
Sbjct: 516 LLIDKLLKIKKSEEALDLLQMMKKQNYPA----YAEAFDGYLAKFGTLEDAKKFLDVLSS 571
Query: 281 RGFVPSDVLYNYIIHGLTKDG 301
+ PS Y ++I ++G
Sbjct: 572 KD-SPSFAAYFHVIEAFYREG 591
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 357 TRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQ 416
T YN LR M + D+ T V F K+ + E +K+ +
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 417 DMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV---MPENGLRPCVVTYNALIRG 473
M+ G F P + + ++ L + D DL RV G Y+ + R
Sbjct: 323 YMMDGPF-KPSIQDCSLLLRYLSGSPNPD--LDLVFRVSRKYESTGKSLSKAVYDGIHRS 379
Query: 474 LYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD 533
L + R ++A + +M + G D+ TY+ +V GLC ++EEA+ + D
Sbjct: 380 LTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPD 439
Query: 534 NFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILIN-CACHLDLKSEAYQIV 592
+ +++G C++ ++A +++ G + ++LI+ H + + ++
Sbjct: 440 IKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLM 499
Query: 593 REMKKNGLNPDCVTWRILHKIQGKVRK 619
+K + P T+++L K++K
Sbjct: 500 EMVKNANVKPWQSTYKLLIDKLLKIKK 526
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF 535
K +P A + M GI YT +++G ++++AK + ++ + + F
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 536 VYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREM 595
Y ++++GLC +G F EAC L E+ G +PN Y+ L+ SEA ++++EM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 596 KKNG 599
K G
Sbjct: 821 VKKG 824
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 40/161 (24%)
Query: 122 RPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYS 181
+P A MK G P+V+ YTTLI+GY G + A+++F EM G PN TY+
Sbjct: 704 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 763
Query: 182 VLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAE 241
+IRG LC G F E + +
Sbjct: 764 SMIRG----------------------------------------LCMAGEFREACWLLK 783
Query: 242 ELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRG 282
E+ +G VVY ++ L K G+ A +++ EM K+G
Sbjct: 784 EMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G PS+++Y L+D + V A +F +M +G PNV +Y ++I G C G +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER 206
+ EM G PN + YS L+ + + L R+++ ++ ++
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 20/250 (8%)
Query: 110 YHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEML 169
++ L+ FC R +A IF + +R + P+V + L+ G+ G + + EM+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSRFN-PDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 170 ESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLV--DSL 227
+ G +PNS+TY + I G ++R+ G L +L+E M ++ + V L+ +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNF--GEAL--RLFEDMD-RLDFDITVQILTTLIHGSGV 292
Query: 228 CREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSD 287
R + ++ +E+ +G + Y ++ SL K G GA +++ EM+++G P
Sbjct: 293 ARNKI--KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 288 VLYNYIIHGLTK------DGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKA 341
V ++ + G+ K +G C YQ T +L++ CH +V+
Sbjct: 351 VTFHSMFIGMMKSKEFGFNGVC-EYYQKMKERSLVPKTP---TIVMLMKLFCHNGEVNLG 406
Query: 342 REVLKLMLRK 351
++ K ML K
Sbjct: 407 LDLWKYMLEK 416
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 112/294 (38%), Gaps = 41/294 (13%)
Query: 42 LHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIVAKP 101
L A C EA F L S PD +T N+LL + T ++ K
Sbjct: 183 LRAFCTEREMKEARSIFE-KLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV--KR 239
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDM---------------------------- 133
GF P+ V Y +D FC R +A R+F DM
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 134 -------KNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRG 186
RG P+ +Y L++ G + A KV EM E G+EP+S+T+ + G
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 187 VLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQ 246
+++ ++ G +C+ +++M E K L+ C G N + + + +
Sbjct: 360 MMKSKEF--GFNGVCEYYQKMK-ERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 247 GSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
G + +LC R + A ++ +RG S+ +Y + L+ +
Sbjct: 417 GYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSN 470
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 5/268 (1%)
Query: 325 YKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSML 384
+ +L+ A C ++ +AR + + + + D + NI L M+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSRFNPD-VKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 385 ESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRV 444
+ + + +T I+GFCK + EAL++ +DM F V TT+I G A
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDI-TVQILTTLIHGSGVARNK 296
Query: 445 DEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTI 504
+A LF + + GL P YNAL+ L K + A V M GI DS T+
Sbjct: 297 IKARQLFDEI-SKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 505 IVEGLCDCDQ--IEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVD 562
+ G+ + ++ + S + ++K C +G N +++
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 563 SGVSPNIFSYNILINCACHLDLKSEAYQ 590
G P+ + +L C ++A++
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDAFE 443
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 394 TLNTVINGFCKTGSVDEAL----KVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFD 449
+++ ++ K GS +E L K+ +++ KF V F ++ + EA
Sbjct: 141 SMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKF---GVDEFNILLRAFCTEREMKEARS 197
Query: 450 LFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGL 509
+F ++ + P V T N L+ G + Y MV G +S TY I ++G
Sbjct: 198 IFEKL--HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGF 255
Query: 510 CDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNI 569
C EA + D+ + ++ G + N +A E+ G++P+
Sbjct: 256 CKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDC 315
Query: 570 FSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
+YN L++ S A ++++EM++ G+ PD VT+
Sbjct: 316 GAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 140/378 (37%), Gaps = 22/378 (5%)
Query: 227 LCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPS 286
LC + + + L G A+ Y ++I H I + G P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 287 DVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK 346
L N +I+ K +Q ++ ++ A KA E+L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLV 151
Query: 347 LMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTG 406
LMLR Y+ LR+ +++ +DV + +I+ F K G
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHC---GIIKEGLESDVFVRSALIDVFAKLG 208
Query: 407 SVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVT 466
++AL V +M+ G D + + ++I G +R D A +LF R M G T
Sbjct: 209 EPEDALSVFDEMVTG-----DAIVWNSIIGGFAQNSRSDVALELFKR-MKRAGFIAEQAT 262
Query: 467 YNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVI 526
+++R L + +V D +V+ C C +E+A ++ +
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQM- 319
Query: 527 WPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFS-YNILINCACHLDLK 585
D ++ ++ GL ++G EA + SG PN + +L C+ H L
Sbjct: 320 ---KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS-HAGLL 375
Query: 586 SEAYQIVREMKK-NGLNP 602
+ + R MKK G++P
Sbjct: 376 EDGWYYFRSMKKLYGIDP 393
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 144/391 (36%), Gaps = 62/391 (15%)
Query: 102 GFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDA 161
G P + + L++ + F DAH++F M R NV+S+TT+I+ Y A
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKA 146
Query: 162 RKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAF- 220
++ ML V PN TYS ++R D+ R L C + ++ G++ F
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGI-------IKEGLESDVFV 196
Query: 221 -ANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMK 279
+ L+D + G + + +E+ + +V+ +I + R A + MK
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 280 KRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVD 339
+ GF+ ++ T G Q + LV+ C ++
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN--ALVDMYCKCGSLE 310
Query: 340 KAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVI 399
A V M + DVIT +T+I
Sbjct: 311 DALRVFNQMKER---------------------------------------DVITWSTMI 331
Query: 400 NGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENG 459
+G + G EALK+ + M P+ ++ V+ A +++ + F + G
Sbjct: 332 SGLAQNGYSQEALKLFERM-KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 460 LRPCVVTYNALIRGLYKLKRPNDAFGVYSSM 490
+ P Y +I L K + +DA + + M
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 146/367 (39%), Gaps = 78/367 (21%)
Query: 121 RRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTY 180
RR D + KN Y+TLI Y A + F++M + G +++++
Sbjct: 81 RRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSF 140
Query: 181 SVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIA 240
+ L+ L ++ + +L ++ +R +N++
Sbjct: 141 NALLNACLHSKNFDKVPQLFDEIPQR--------------------------YNKI---- 170
Query: 241 EELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
+ +++ YG +I S C G A I+ +M+ +G + + + I+ L K
Sbjct: 171 --------IPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKK 222
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM-LRKEGVDKTRI 359
G+ D+ + +V+ C ++D A +++M +KE ++ +
Sbjct: 223 GEL---------------EVADNLWNEMVKKGC---ELDNAAYNVRIMSAQKESPERVK- 263
Query: 360 YNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDML 419
M + D I+ N ++ +C+ G +DEA KV + L
Sbjct: 264 ------------------ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEG-L 304
Query: 420 MGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKR 479
G CAP+ +F T+I L + ++ + +F + + + + P T L+ GL + K+
Sbjct: 305 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI-PDFNTLKHLVVGLVENKK 363
Query: 480 PNDAFGV 486
+DA G+
Sbjct: 364 RDDAKGL 370
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 7/218 (3%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKFCAP-DVVSFTTVISGLLDATRVDEAFDLFHRV 454
+T+I + + + A++ + M ++ P VSF +++ L + D+ LF +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQM--DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 455 MPE--NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDC 512
P+ N + P ++Y LI+ P A + M G+ + +T I+ L
Sbjct: 164 -PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKK 222
Query: 513 DQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSY 572
++E A + W++++ DN Y + + + E+ G+ P+ SY
Sbjct: 223 GELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISY 281
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRIL 610
N L+ C + EA ++ ++ N P+ T+R L
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 95/227 (41%), Gaps = 10/227 (4%)
Query: 39 ATTLHALCDSNRFSEAHQCFSISLASGSVPDHRTCNVLLARLLRSRTPLQTWALVRSLIV 98
+T + + ++ F+ A + F G+ + N LL L S+ + L +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 99 AKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGI 158
+P ++Y L+ +C P A I M+ +G +++TT+++ G +
Sbjct: 166 RYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL 225
Query: 159 GDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK-- 216
A +++EM++ G E ++ Y+V I +E E + +L E MS G+K
Sbjct: 226 EVADNLWNEMVKKGCELDNAAYNVRIMSAQKE-----SPERVKELIEEMS---SMGLKPD 277
Query: 217 VAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLC 263
++ L+ + C G +E ++ E L + +I LC
Sbjct: 278 TISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 176/446 (39%), Gaps = 34/446 (7%)
Query: 137 GHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGG 196
G+ NV T++++ Y + DAR+VFDE+ V P+ ++++V++R L+ +
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVMSDARRVFDEI----VNPSDVSWNVIVRRYLEMGFNDEA 247
Query: 197 RELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSL-AEEVVY 255
+ K+ E + V A C EV ++ + + S+ A+ VV
Sbjct: 248 VVMFFKMLELNVRPLNHTVSSVMLA------CSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 256 GQMIDSLCKVGRYHGAARIVYEMKKRGFVP-SDVLYNYIIHGLTKDGDCMRGYQXXXXXX 314
+ D K R A R+ + + + + + Y + GLT++ +
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 315 XXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRK-EGVDKTRIYNIYLRAXXXXXXX 373
++ ++ H + D+A + L LM ++ E +D + I L
Sbjct: 362 ---------SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI-LNVCSGISDV 411
Query: 374 XXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTT 433
+ +VI N +++ + K G++ A + M + D VS+
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR----DEVSWNA 467
Query: 434 VISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSD 493
+++G+ R ++A F + E +P T L+ G + N ++ ++ D
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 494 GIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEA 553
G D +V+ C + A +V + D ++ +I++G CR+G E
Sbjct: 526 GYKIDVVIRGAMVDMYSKCRCFDYAI----EVFKEAATRDLILWNSIIRGCCRNGRSKEV 581
Query: 554 CHFLYELVDSGVSPNIFSY-NILINC 578
L + GV P+ ++ IL C
Sbjct: 582 FELFMLLENEGVKPDHVTFLGILQAC 607
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 383 MLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDAT 442
+L+ C D+ ++I+ + + G +++A KV K DVVS+T +I G
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD-----KSPHRDVVSYTALIKGYASRG 214
Query: 443 RVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTY 502
++ A LF + ++ VV++NA+I G + +A ++ M+ + D +T
Sbjct: 215 YIENAQKLFDEIPVKD-----VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 503 TIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNF-VYAAILKGLCRSGNFNEACHFLYELV 561
+V IE + H I G N + A++ + G AC L
Sbjct: 270 VTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 562 DSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
++ S+N LI H++L EA + +EM ++G P+ VT
Sbjct: 329 ----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 98 VAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGG 157
+ K GF +V Y +MD + RR DA R+ MK RG PN+ Y +LI+ +
Sbjct: 414 MVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMD 473
Query: 158 IGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKV 217
+ A K++ EM + V P+ ++Y+ +I + ++LE EL + RM+ +
Sbjct: 474 LRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEF--RMN---RGKIDR 528
Query: 218 AAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVG 266
A +V + +E+ R+ +++ +G+ + +Y +++L G
Sbjct: 529 AMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 144/361 (39%), Gaps = 40/361 (11%)
Query: 111 HRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLE 170
H++++ F F+ + R+ F K G YT + + G +A +V +EM +
Sbjct: 226 HKVVELFQEFK----SQRLSFLAKESGSI-----YTIVCSSLAKSGRAFEALEVLEEMKD 276
Query: 171 SGVEPNSLTYSVLIRGVLQERDL---------EGGREL-----MCKLWERMSVE---VES 213
G+ +S YS+LIR + R++ GG++L MC M V +E+
Sbjct: 277 KGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMET 336
Query: 214 GVKVAA-------------FANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMID 260
++V A +V+ ++ F E ++ E + A +V Y I+
Sbjct: 337 TLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAIN 396
Query: 261 SLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXX 320
+ C++ +Y+ A + EM K+GF V Y+ I+ K +
Sbjct: 397 AYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKP 456
Query: 321 CDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXX 380
Y L++ D+ +A ++ K M R + + Y + A
Sbjct: 457 NIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELY 516
Query: 381 XSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLD 440
++ + D ++ F KT +DE +++LQDM + + D +++ ++ L D
Sbjct: 517 QEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKV-EGTRLDARLYSSALNALRD 575
Query: 441 A 441
A
Sbjct: 576 A 576
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 141/369 (38%), Gaps = 68/369 (18%)
Query: 254 VYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXX 313
+Y + SL K GR A ++ EMK +G S LY+ +I + +
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREV---------- 299
Query: 314 XXXXXXXCDHTYKVLVEALCHVFDVDKAREVLK---------LMLRKEGVDKTRIYNIYL 364
V+ E L F +++LK LM +EG +T + +
Sbjct: 300 -------------VITEKL---FKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVV-- 341
Query: 365 RAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFC 424
+M +++ + L ++NGF K EA+KV + M + C
Sbjct: 342 ----------------AAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYE-WAMKEEC 384
Query: 425 APDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAF 484
V++ I+ + ++A LF M + G CVV Y+ ++ K +R +DA
Sbjct: 385 EAGQVTYAIAINAYCRLEKYNKAEMLFDE-MVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 485 GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGL 544
+ + M G + Y +++ + A+ W ++ + D Y +++
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
Query: 545 CRSGNFNEACHFLYE-------LVD---SGVSPNIFSYNILINCACHL--DLKSEAYQIV 592
RS E C LY+ +D +G+ +FS I+ L D+K E ++
Sbjct: 504 NRSKEL-ERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLD 562
Query: 593 REMKKNGLN 601
+ + LN
Sbjct: 563 ARLYSSALN 571
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 33/288 (11%)
Query: 337 DVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLN 396
D+ AR+V M + V T + Y+++ SM + ++ + N
Sbjct: 160 DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAK--------SMFDLMPERNLGSWN 211
Query: 397 TVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMP 456
+++G K+G + A K+ +M D++S+T++I G + A DLF
Sbjct: 212 ALVDGLVKSGDLVNAKKLFDEM-----PKRDIISYTSMIDGYAKGGDMVSARDLF----- 261
Query: 457 ENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQI- 515
E V ++ALI G + +PN+AF V+S M + + D I+V + C Q+
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE---FIMVGLMSACSQMG 318
Query: 516 -----EEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
E+ S+ H + + ++V A++ + G+ + A E+ ++
Sbjct: 319 CFELCEKVDSYLHQRM--NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR----DLV 372
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTWRILHKIQGKVR 618
SY ++ SEA ++ +M G+ PD V + ++ K+ G+ R
Sbjct: 373 SYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/514 (19%), Positives = 203/514 (39%), Gaps = 65/514 (12%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
+V K G+V +V L+ + F ++ ++F +M R +V S+ T+I+ + G
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSG 187
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVK 216
A ++F M SG EPNS++ +V I + LE G+E+ K V+ G +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC-------VKKGFE 240
Query: 217 VAAFAN--LVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARI 274
+ + N LVD + + +++P + SL V + MI G I
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSL---VAWNSMIKGYVAKGDSKSCVEI 296
Query: 275 VYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCH 334
+ M G PS I+ ++ + + G H Y
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI-------------HGY--------- 334
Query: 335 VFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVIT 394
V++ ++ + + ++Y + + ES
Sbjct: 335 ---------VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES-------- 377
Query: 395 LNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRV 454
N +I+ + G+ +A++V D ++ PDVV+FT+V+ +++ + H
Sbjct: 378 WNVMISSYISVGNWFKAVEVY-DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI-HLS 435
Query: 455 MPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLCDCDQ 514
+ E+ L + +AL+ K +AF +++S+ D ++T+++ Q
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQ 491
Query: 515 IEEAKSFWHDVIWPSGIH-DNFVYAAILKGLCRSGNFNEACHFLYELVDS-GVSPNIFSY 572
EA + D + G+ D A+L +G +E F ++ G+ P I Y
Sbjct: 492 PREAL-YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 573 NILINCACHLDLKSEAYQIVREMKKNGLNPDCVT 606
+ +I+ EAY+I+++ + N + ++
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 396 NTVINGFCKTGSVDEALKVLQDMLMGKF--CAPDVVSFTTVISGLL--------DATRVD 445
N++I F K G + A+ + + M+ K C P + ++ + LL + ++
Sbjct: 211 NSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYME 270
Query: 446 EAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM-VSDGIGADSTTYTI 504
LF R M ++G+ P V N L++G NDA ++ M V +S TY
Sbjct: 271 TVRSLF-RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 505 IVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSG 564
++ GLC + A+ ++ + + Y +++ SG ++A L+E++++G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 565 VSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGL 600
+ SY L++ +C EA +++ +++ L
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 129 IFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEM-LESGVEPNSLTYSVLIRGV 187
+F M + G P+V + L+ GY + DA ++F +M + EPNS TY LI G+
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 188 LQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQG 247
+ REL+ ++ + V ++ +LV++ G ++ + E+ G
Sbjct: 335 CAQGRTINARELLSEMKGKGFVP-----NGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 248 SLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
+ + + Y ++D C+ G+Y A R++ ++++ V D Y+ +++ L KD
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS-YDKLVNVLHKD 441
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 431 FTTVISGLLDATRVDEAFDLFHRVMPENGL--RPCVVTYNALIRGLYKLKRPNDAF---- 484
+ ++I A ++ A ++F ++ L RP + TY+ L + L L R N+++
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKAL--LGRGNNSYINHV 267
Query: 485 ------GVYSSMVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHD----N 534
++ MV GI D +V+G + +A +H + S ++D +
Sbjct: 268 YMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM---SVVYDCEPNS 324
Query: 535 FVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVRE 594
F Y ++ GLC G A L E+ G PN SYN L+N +A + + E
Sbjct: 325 FTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWE 384
Query: 595 MKKNGLNPDCVTWRIL 610
M +NG D +++R L
Sbjct: 385 MIENGRVVDFISYRTL 400
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 11/206 (5%)
Query: 387 QCRADVITLNTVINGFCKTGSVD-------EALKVLQDMLMGKFCAPDVVSFTTVISGLL 439
+CR + T + + G+ E ++ L ++ PDV + ++ G +
Sbjct: 240 ECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYV 299
Query: 440 DATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADS 499
+ V++A +FH++ P TY+ LI GL R +A + S M G +
Sbjct: 300 LSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNG 359
Query: 500 TTYTIIVEGLCDCDQIEEA-KSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
+Y +V +I++A K W ++I + D Y ++ CR G ++EA L
Sbjct: 360 KSYNSLVNAFALSGEIDDAVKCLW-EMIENGRVVDFISYRTLVDESCRKGKYDEATRLL- 417
Query: 559 ELVDSGVSPNIFSYNILINCACHLDL 584
E++ + SY+ L+N H DL
Sbjct: 418 EMLREKQLVDRDSYDKLVNV-LHKDL 442
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 27/236 (11%)
Query: 138 HCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG---VEPNSLTYSVLIRGVLQERD-- 192
H N Y ++I + G + A +F M+ S P TY +L + +L +
Sbjct: 203 HIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNS 262
Query: 193 ------LEGGRELMCKLWERMSVEVESGVKVAAFAN--LVDSLCREGFFNEVFRIAEELP 244
+E R L ++ V+SG++ FA LV N+ RI ++
Sbjct: 263 YINHVYMETVRSLFRQM-------VDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS 315
Query: 245 ----CQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKD 300
C+ Y +I LC GR A ++ EMK +GFVP+ YN +++
Sbjct: 316 VVYDCE---PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALS 372
Query: 301 GDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDK 356
G+ + +Y+ LV+ C D+A +L+++ K+ VD+
Sbjct: 373 GEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 105 PSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKV 164
P+ Y L+ C R +A + +MK +G PN SY +L+N + G I DA K
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 165 FDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVES 213
EM+E+G + ++Y L+ ++ + L+ L E+ V+ +S
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS 430
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/491 (19%), Positives = 193/491 (39%), Gaps = 74/491 (15%)
Query: 140 PNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGREL 199
P V+++ ++I + A F EM SG P+ + +++ DL G +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 200 ---MCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGS-------L 249
+ +L M ++ +G A N+ L G V + +E+P + S
Sbjct: 128 HGFIVRL--GMDCDLYTG---NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 250 AEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQX 309
AE + IDS+ R V+E+ R V S YN II G + G +
Sbjct: 183 AETCIMPFGIDSV----------RRVFEVMPRKDVVS---YNTIIAGYAQSGMYEDALRM 229
Query: 310 XXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVDKTRIYNIYLRAXXX 369
T ++ DV K +E+ ++RK G+D
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GID-------------- 274
Query: 370 XXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVV 429
+DV +++++ + K+ ++++ +V + +C D +
Sbjct: 275 --------------------SDVYIGSSLVDMYAKSARIEDSERVFSRL----YCR-DGI 309
Query: 430 SFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSS 489
S+ ++++G + R +EA LF R M ++P V ++++I L + ++
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLF-RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 490 MVSDGIGADSTTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGN 549
++ G G++ + +V+ C I+ A+ + + + D + AI+ G G+
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM----NVLDEVSWTAIIMGHALHGH 424
Query: 550 FNEACHFLYELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKK-NGLNPDCVTWR 608
+EA E+ GV PN ++ ++ H+ L EA+ M K GLN + +
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 609 ILHKIQGKVRK 619
+ + G+ K
Sbjct: 485 AVADLLGRAGK 495
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 148/386 (38%), Gaps = 52/386 (13%)
Query: 116 QFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESGVEP 175
+ C+ D+ R F++ R +VVSY T+I GY G DA ++ EM + ++P
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPR---KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 176 NSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGFFNE 235
+S T S ++ + D+ G+E+ + + ++S V + ++LVD + +
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK---GIDSDVYIG--SSLVDMYAKSARIED 295
Query: 236 VFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLYNYIIH 295
R+ L C+ ++ + ++ + GRY+ A R+ +M P V ++ +I
Sbjct: 296 SERVFSRLYCRDGIS----WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
Query: 296 GLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLMLRKEGVD 355
G Q LV+ ++ AR++ M
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM------- 404
Query: 356 KTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSVDEALKVL 415
N+ D ++ +I G G EA+ +
Sbjct: 405 -----NVL---------------------------DEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 416 QDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFHRVMPENGLRPCVVTYNALIRGLY 475
++M + P+ V+F V++ VDEA+ F+ + GL + Y A+ L
Sbjct: 433 EEMKR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 476 KLKRPNDAFGVYSSMVSDGIGADSTT 501
+ + +A+ S M + G+ +T
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWST 517
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 113 LMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEMLESG 172
L+D + R D+ R+F +R +C + +S+ +L+ GY G +A ++F +M+ +
Sbjct: 283 LVDMYAKSARIEDSERVF----SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 338
Query: 173 VEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLCREGF 232
V+P ++ +S +I L G++L + + G + + LVD + G
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYV-----LRGGFGSNIFIASALVDMYSKCGN 393
Query: 233 FNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDVLY 290
+I + + ++ +EV + +I G H A + EMK++G P+ V +
Sbjct: 394 IKAARKIFDRM----NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 146/385 (37%), Gaps = 57/385 (14%)
Query: 113 LMDQFCVFRRPCD----AHRIFFDMKNRGHCPNVVSYTTLINGYCSVGGIGDARKVFDEM 168
L + +F CD A ++ +M + NVVS+T +I+ Y G +A VF EM
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPEK----NVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 169 LESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWERMSVEVESGVKVAAFANLVDSLC 228
+ S +PN T++ ++ ++ L G+++ + V+ + ++L+D
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQI-----HGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 229 REGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAARIVYEMKKRGFVPSDV 288
+ G E I E LP + + V +I ++G A + + + G P
Sbjct: 200 KAGQIKEAREIFECLPER----DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSP--- 252
Query: 289 LYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALCHVFDVDKAREVLKLM 348
NY+ TY L+ AL + +D ++ +
Sbjct: 253 --NYV------------------------------TYASLLTALSGLALLDHGKQAHCHV 280
Query: 349 LRKEGVDKTRIYNIYLRAXXXXXXXXXXXXXXXSMLESQCRADVITLNTVINGFCKTGSV 408
LR+E Y + + + ++ I+ N ++ G+ K G
Sbjct: 281 LRRE----LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 409 DEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH-RVMPENGLRPCVVTY 467
E L++ + M K PD V+ V+SG D ++F V E G +P Y
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 468 NALIRGLYKLKRPNDAFGVYSSMVS 492
++ L + R ++AF M S
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPS 421
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 393 ITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDLFH 452
I T +N K+ EAL V ML+ PD+V++ ++ L A + E F +
Sbjct: 508 IIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVID 567
Query: 453 --RVMPENGLRPC------------VVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGAD 498
R P+ +P VV YNA++ + K+ AF V + G
Sbjct: 568 TMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPS 627
Query: 499 STTYTIIVEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLY 558
TY +I+E + C++ F+ + S I + Y ++ L + G +EA H +
Sbjct: 628 PVTYGLIMEVMLACEKYNLVHEFFRK-MQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVE 686
Query: 559 ELVDSGVSPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNPDCVTW 607
++ G+ + Y L C C +E +++++ + P VT+
Sbjct: 687 DMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTY 735
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
DV+ N V+N + + A VLQ L + P V++ ++ +L + + +
Sbjct: 592 DVVVYNAVLNACVQRKQWEGAFWVLQ-QLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 451 FHRVMPENGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSMVSDGIGADSTTYTIIVEGLC 510
F R M ++ + P + Y L+ L+K + ++A M S GI + Y + LC
Sbjct: 651 F-RKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLC 708
Query: 511 DCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGVSPNIF 570
+ E + + + Y +++ SGN A ++++ + SPN+
Sbjct: 709 SAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAA-YIFDQMKKVCSPNLV 767
Query: 571 SYNILINCACHLDLKSEAYQIVREMKKNG 599
+ NI++ L EA ++ ++M ++G
Sbjct: 768 TCNIMLKAYLQGGLFEEARELFQKMSEDG 796
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 391 DVITLNTVINGFCKTGSVDEALKVLQDMLMGKFCAPDVVSFTTVISGLLDATRVDEAFDL 450
D++T +++ + K+G+ + A + ++ L PD + +I G ++A + L
Sbjct: 418 DILTATALVHMYSKSGNFERATEAFEN-LKSYGLRPDEKIYEAMILGYVNAGKPK----L 472
Query: 451 FHRVMPE---NGLRPCVVTYNALIRGLYKLKRPNDAFGVYSSM--VSDGIGADSTTYTII 505
R+M E L+ Y AL+R ++ N A G+ SSM SDG Y++
Sbjct: 473 GERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDG-PLSFEAYSLF 531
Query: 506 VEGLCDCDQIEEAKSFWHDVIWPSGIHDNFVYAAILKGLCRSGNFNEACHFLYELVDSGV 565
VE Q+++AKS + ++ D+ A +++ + ++A L +L G+
Sbjct: 532 VEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGI 591
Query: 566 SPNIFSYNILINCACHLDLKSEAYQIVREMKKNGLNP 602
+ +Y +L++ +L L EA Q++ ++ + G P
Sbjct: 592 EIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 628
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 10/252 (3%)
Query: 97 IVAKPGFVPSLVNYHRLMDQFCVFRRPCDAHRIFFDMKNRGHCPNVVSYTTLINGYCSVG 156
++ + F S+ +Y +L+ D RI M G P++++ T L++ Y G
Sbjct: 374 VLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSG 433
Query: 157 GIGDARKVFDEMLESGVEPNSLTYSVLIRGVLQERDLEGGRELMCKLWER---MSVEVES 213
A + F+ + G+ P+ Y +I G + + G LM ++ + S EV
Sbjct: 434 NFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYM 493
Query: 214 GVKVAAFANLVDSLCREGFFNEVFRIAEELPCQGSLAEEVVYGQMIDSLCKVGRYHGAAR 273
+ + A+A + D+ G + + + G L+ E Y +++ K G+ A
Sbjct: 494 AL-LRAYAQMGDANGAAGISSSM-----QYASDGPLSFEA-YSLFVEAYGKAGQVDKAKS 546
Query: 274 IVYEMKKRGFVPSDVLYNYIIHGLTKDGDCMRGYQXXXXXXXXXXXXCDHTYKVLVEALC 333
EM+K G P D ++ + + + TY VLV+ +
Sbjct: 547 NFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMA 606
Query: 334 HVFDVDKAREVL 345
++ +++A ++L
Sbjct: 607 NLGLIEEAEQLL 618