Miyakogusa Predicted Gene

Lj1g3v2379130.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
         (898 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08800.1 | Symbols:  | ARM repeat superfamily protein | chr3:...   480   e-135

>AT3G08800.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:2671148-2674910 FORWARD LENGTH=936
          Length = 936

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 321/915 (35%), Positives = 473/915 (51%), Gaps = 61/915 (6%)

Query: 20  QPLSLHTLSSMRSLLINPSTPKRTVSSILETLTR-----SPQLTHHSLNLLSELA----T 70
           + +SL TL+S+RSL+IN  T    +SS+ + LT      +  + HH L LLS+LA     
Sbjct: 14  ESISLDTLASIRSLIINADTSDSVISSVFDFLTGLLSRGNSAILHHVLKLLSDLAFRRKE 73

Query: 71  LNPSFTLDTLLPS--------AAESTTRLAVEALAALKPGCE-----------LDGETFV 111
           L P    D++L +        A  S  R AVE+LA L    E           +D E F 
Sbjct: 74  LAPQI-FDSILSNLLRLHNTVAEASHERAAVESLAVLASLSERTPSIAAALSKIDDEVFA 132

Query: 112 SLCFGPSVPARLWMLRNAGLGYRVRPALLFPVLLGFTRDPFPYVREASLEGLVRLSECGE 171
           S+C G  + +RLW+LRNA   + V  ++LF + LGF++DP+PY+R+ +L+GL+ +   G+
Sbjct: 133 SICLGAPISSRLWLLRNAD-RFNVPSSVLFTLFLGFSKDPYPYIRKVALDGLINICNAGD 191

Query: 172 FQDLGLVKGCYQRAVQLLGDVEGCVRISALRVVASWG-LMLAAFNADM-KVYWSNEVFAK 229
           F     V+GCY RAV+LL D E  VR SA+R V+ WG +M+A+   +M +   ++ VF +
Sbjct: 192 FNHTHAVEGCYTRAVELLSDAEDSVRSSAVRAVSVWGKVMIASKEEEMNRRDCTDAVFLQ 251

Query: 230 LCSAARDMSMKVRVEAFNGLRKMEVVSEDILMQXXXXXXXXXXXXXXXXDERKSEQFVML 289
           LCS  RDMS+ VRVE F     +   SE I++Q                 + K  Q ++ 
Sbjct: 252 LCSVVRDMSVDVRVEVFKAFGIIGTASESIILQ-------TLSKKVLGAGKGKKPQNLLS 304

Query: 290 -----APSVAGALVHGLEDEFFEVRKAACQSLHRLTILSAKFACEAXXXXXXXXXXXSVV 344
                  S AG  +HG EDEF+EVR+AA  S H L++ S KF  EA            +V
Sbjct: 305 NGSADVSSAAGVYIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLLMDMLYDDYMV 364

Query: 345 VRFQALETMHHMAINGCLKLQEKHVHMFLGALVDCSWEVRHAERKILKIVKLNDLALFKS 404
           VR +AL+ +HH+A  G LK+QE ++  FL A+VD S  +R   R ILK+ KL DL L   
Sbjct: 365 VRLKALKALHHIADLGNLKIQETYMPAFLDAIVDTSENIRVEARNILKLAKLPDLKLVNK 424

Query: 405 SIDRLLENLQSYSQDEADVFSAFSHLGRNHKKF-VGLIMRETXXXXXXXXXXXXXXXXXX 463
            ID +L++L+ Y QDE D+ SA  H G+NH  F V ++ R +                  
Sbjct: 425 CIDGVLKSLEMYPQDEPDILSALFHFGQNHTNFLVSMVKRFSEKLGTASGSKAEFNSRQL 484

Query: 464 XXXXXXXXXXXXXFNADIGSIPPLMFSYAVTLLGRIYYAFSDIMDRDALLAYLCERSRST 523
                            I SIPPL FSY++ +LG+      D+MD+D LLAYL   +  +
Sbjct: 485 SASLTLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSSGLHDMMDQDMLLAYLTHCAILS 544

Query: 524 AYSAANINLEEGKQQLPLSEGDAANLSSNEVMDSIMVSHIMREQKEVANYQVEQNQSLHN 583
           + S    N  +G           A+L+ N V+  +    I  E K +A    +    + N
Sbjct: 545 SSSGTEFN--KGDVFFHAYRDSNADLAGNPVL--LPGKDIPAESKYMA---CKAELEIGN 597

Query: 584 EVTNFTNYILDKFPGLWSMIQTGGTNEVLRSFRCLKEDLALLKFDSLGSGDALAFTVLYL 643
           +   F N+IL K    W + Q+G + E LR+ R  K++LA L  DS  S   L F   Y+
Sbjct: 598 QALKFVNHILLKIKAAWLLSQSGCSKEALRALRACKQELATLTADSSISKGTLDFICQYV 657

Query: 644 RNITLLVEVWEHLHLGPANGLSSCGTVLESKLQKLDR-RAKEFLSRFVGFTAXXXXXXXX 702
             I LLV+VW H +   +  +S+C +V    L +    +  E   RF G +         
Sbjct: 658 HVIELLVQVWPHFNY--SRHISTCSSVEVELLMEEVEIKLMEIRCRFTGLST---EESLV 712

Query: 703 XXXVTYA--LRLYKVETSCLSLTLERLTAIYLRFVSILKEKSSLPSNFVAELGKLLHECT 760
              V +   LRLYK E  C    +E+L++   +     +++ + PS+F+ E  K L E  
Sbjct: 713 LELVIFGCLLRLYKFEICCRLSCMEKLSSTISQLELHHEQQCTKPSDFLTETKKSLEEFG 772

Query: 761 STYEA-SCSPLELDKCLKLFSLKQFMFHGGIRHVKAELSIPNNDSEHHLTFVSGLPVGIQ 819
           S+ +  SC  L+L K  K FS +QF F   ++ V AE+ +P N     ++FV GLPV I 
Sbjct: 773 SSDDINSCRLLDLIKIFKCFSPEQFTFSVNLQCVSAEVEVPGNGPYSPISFVPGLPVAIP 832

Query: 820 CEITLHNVLCDSRLWLRMSVDDGSTQYVFLDLDRFEGSREVRKLAFVVPFYRTPKANSLK 879
           CEITL NV  D+ LWLR+S +D + Q+V+LD + + G+   ++  F    Y TP+A    
Sbjct: 833 CEITLLNVPRDTCLWLRISRNDETCQFVYLDPNLYNGNGREKRFMFTAVTYMTPRAVVFT 892

Query: 880 LKVSIGLECMFENVC 894
           L+VSIG+EC+FE++C
Sbjct: 893 LRVSIGIECLFEDIC 907