Miyakogusa Predicted Gene
- Lj1g3v2379130.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
(898 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08800.1 | Symbols: | ARM repeat superfamily protein | chr3:... 480 e-135
>AT3G08800.1 | Symbols: | ARM repeat superfamily protein |
chr3:2671148-2674910 FORWARD LENGTH=936
Length = 936
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 321/915 (35%), Positives = 473/915 (51%), Gaps = 61/915 (6%)
Query: 20 QPLSLHTLSSMRSLLINPSTPKRTVSSILETLTR-----SPQLTHHSLNLLSELA----T 70
+ +SL TL+S+RSL+IN T +SS+ + LT + + HH L LLS+LA
Sbjct: 14 ESISLDTLASIRSLIINADTSDSVISSVFDFLTGLLSRGNSAILHHVLKLLSDLAFRRKE 73
Query: 71 LNPSFTLDTLLPS--------AAESTTRLAVEALAALKPGCE-----------LDGETFV 111
L P D++L + A S R AVE+LA L E +D E F
Sbjct: 74 LAPQI-FDSILSNLLRLHNTVAEASHERAAVESLAVLASLSERTPSIAAALSKIDDEVFA 132
Query: 112 SLCFGPSVPARLWMLRNAGLGYRVRPALLFPVLLGFTRDPFPYVREASLEGLVRLSECGE 171
S+C G + +RLW+LRNA + V ++LF + LGF++DP+PY+R+ +L+GL+ + G+
Sbjct: 133 SICLGAPISSRLWLLRNAD-RFNVPSSVLFTLFLGFSKDPYPYIRKVALDGLINICNAGD 191
Query: 172 FQDLGLVKGCYQRAVQLLGDVEGCVRISALRVVASWG-LMLAAFNADM-KVYWSNEVFAK 229
F V+GCY RAV+LL D E VR SA+R V+ WG +M+A+ +M + ++ VF +
Sbjct: 192 FNHTHAVEGCYTRAVELLSDAEDSVRSSAVRAVSVWGKVMIASKEEEMNRRDCTDAVFLQ 251
Query: 230 LCSAARDMSMKVRVEAFNGLRKMEVVSEDILMQXXXXXXXXXXXXXXXXDERKSEQFVML 289
LCS RDMS+ VRVE F + SE I++Q + K Q ++
Sbjct: 252 LCSVVRDMSVDVRVEVFKAFGIIGTASESIILQ-------TLSKKVLGAGKGKKPQNLLS 304
Query: 290 -----APSVAGALVHGLEDEFFEVRKAACQSLHRLTILSAKFACEAXXXXXXXXXXXSVV 344
S AG +HG EDEF+EVR+AA S H L++ S KF EA +V
Sbjct: 305 NGSADVSSAAGVYIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLLMDMLYDDYMV 364
Query: 345 VRFQALETMHHMAINGCLKLQEKHVHMFLGALVDCSWEVRHAERKILKIVKLNDLALFKS 404
VR +AL+ +HH+A G LK+QE ++ FL A+VD S +R R ILK+ KL DL L
Sbjct: 365 VRLKALKALHHIADLGNLKIQETYMPAFLDAIVDTSENIRVEARNILKLAKLPDLKLVNK 424
Query: 405 SIDRLLENLQSYSQDEADVFSAFSHLGRNHKKF-VGLIMRETXXXXXXXXXXXXXXXXXX 463
ID +L++L+ Y QDE D+ SA H G+NH F V ++ R +
Sbjct: 425 CIDGVLKSLEMYPQDEPDILSALFHFGQNHTNFLVSMVKRFSEKLGTASGSKAEFNSRQL 484
Query: 464 XXXXXXXXXXXXXFNADIGSIPPLMFSYAVTLLGRIYYAFSDIMDRDALLAYLCERSRST 523
I SIPPL FSY++ +LG+ D+MD+D LLAYL + +
Sbjct: 485 SASLTLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSSGLHDMMDQDMLLAYLTHCAILS 544
Query: 524 AYSAANINLEEGKQQLPLSEGDAANLSSNEVMDSIMVSHIMREQKEVANYQVEQNQSLHN 583
+ S N +G A+L+ N V+ + I E K +A + + N
Sbjct: 545 SSSGTEFN--KGDVFFHAYRDSNADLAGNPVL--LPGKDIPAESKYMA---CKAELEIGN 597
Query: 584 EVTNFTNYILDKFPGLWSMIQTGGTNEVLRSFRCLKEDLALLKFDSLGSGDALAFTVLYL 643
+ F N+IL K W + Q+G + E LR+ R K++LA L DS S L F Y+
Sbjct: 598 QALKFVNHILLKIKAAWLLSQSGCSKEALRALRACKQELATLTADSSISKGTLDFICQYV 657
Query: 644 RNITLLVEVWEHLHLGPANGLSSCGTVLESKLQKLDR-RAKEFLSRFVGFTAXXXXXXXX 702
I LLV+VW H + + +S+C +V L + + E RF G +
Sbjct: 658 HVIELLVQVWPHFNY--SRHISTCSSVEVELLMEEVEIKLMEIRCRFTGLST---EESLV 712
Query: 703 XXXVTYA--LRLYKVETSCLSLTLERLTAIYLRFVSILKEKSSLPSNFVAELGKLLHECT 760
V + LRLYK E C +E+L++ + +++ + PS+F+ E K L E
Sbjct: 713 LELVIFGCLLRLYKFEICCRLSCMEKLSSTISQLELHHEQQCTKPSDFLTETKKSLEEFG 772
Query: 761 STYEA-SCSPLELDKCLKLFSLKQFMFHGGIRHVKAELSIPNNDSEHHLTFVSGLPVGIQ 819
S+ + SC L+L K K FS +QF F ++ V AE+ +P N ++FV GLPV I
Sbjct: 773 SSDDINSCRLLDLIKIFKCFSPEQFTFSVNLQCVSAEVEVPGNGPYSPISFVPGLPVAIP 832
Query: 820 CEITLHNVLCDSRLWLRMSVDDGSTQYVFLDLDRFEGSREVRKLAFVVPFYRTPKANSLK 879
CEITL NV D+ LWLR+S +D + Q+V+LD + + G+ ++ F Y TP+A
Sbjct: 833 CEITLLNVPRDTCLWLRISRNDETCQFVYLDPNLYNGNGREKRFMFTAVTYMTPRAVVFT 892
Query: 880 LKVSIGLECMFENVC 894
L+VSIG+EC+FE++C
Sbjct: 893 LRVSIGIECLFEDIC 907