Miyakogusa Predicted Gene

Lj1g3v2377970.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2377970.3 tr|G7KTA1|G7KTA1_MEDTR MATE efflux family protein
expressed OS=Medicago truncatula GN=MTR_7g070210 P,83.28,0,seg,NULL;
MatE,Multi antimicrobial extrusion protein; MATE EFFLUX FAMILY
PROTEIN,NULL; MULTIDRUG RES,CUFF.28967.3
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...   330   5e-91
AT4G38380.1 | Symbols:  | MATE efflux family protein | chr4:1797...   263   1e-70
AT1G51340.1 | Symbols:  | MATE efflux family protein | chr1:1903...   216   1e-56
AT1G51340.2 | Symbols:  | MATE efflux family protein | chr1:1903...   216   2e-56
AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...   211   7e-55
AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...   211   7e-55

>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD LENGTH=521
          Length = 521

 Score =  330 bits (847), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 168/306 (54%), Positives = 210/306 (68%)

Query: 1   MRGPAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXX 60
           MR PA+QFL LRA+GAP IV+ALA QG FRGF DT TPLYAV AGN LN +LDP      
Sbjct: 204 MRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILIFVL 263

Query: 61  XXXXXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVF 120
                        SEYLIAFILLWKL++ V+L+       +   YLKSGG L+GRT+A+ 
Sbjct: 264 GFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTVALL 323

Query: 121 ITMTLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARL 180
           +  TL TS+AA+ GP  MAGHQI +++WL++S                +YS G Y QAR 
Sbjct: 324 VPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQARE 383

Query: 181 IIYRVIQIGLGVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFV 240
           +++ V+Q+GL  G  L+ +LF  F  F+SLFTTDSEVL +A SG LFVAGSQPVNALAFV
Sbjct: 384 VLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFV 443

Query: 241 IDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRL 300
           +DG+YYGVSDF +AAYSMV+ G  SS+F+LV  P FGL G+W GLF+FM LR++AG  RL
Sbjct: 444 LDGLYYGVSDFGFAAYSMVIVGFISSLFMLVAAPTFGLAGIWTGLFLFMALRLVAGAWRL 503

Query: 301 SSKRGP 306
            ++ GP
Sbjct: 504 GTRTGP 509


>AT4G38380.1 | Symbols:  | MATE efflux family protein |
           chr4:17971855-17974787 REVERSE LENGTH=560
          Length = 560

 Score =  263 bits (672), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/303 (46%), Positives = 190/303 (62%)

Query: 4   PAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXXXXX 63
           PA+QFL LRA GAPA V++LA+QG FRGF DTKTP+Y +G GNFL V L P         
Sbjct: 246 PARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVYCLGIGNFLAVFLFPLFIYKFRMG 305

Query: 64  XXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVFITM 123
                     S+Y +A ++L  L+ +V+L+P      K   YLKSGGF+LGRTL+V +TM
Sbjct: 306 VAGAAISSVISQYTVAILMLILLNKRVILLPPKIGSLKFGDYLKSGGFVLGRTLSVLVTM 365

Query: 124 TLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARLIIY 183
           T+ TS+AA+ G   MA HQICMQVWL++S                S S  ++   + +  
Sbjct: 366 TVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVTT 425

Query: 184 RVIQIGLGVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFVIDG 243
            V++IG+  GI L+I+L   F +   LF+ D EVL + R G+LFVA +QP+ ALAF+ DG
Sbjct: 426 FVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFDG 485

Query: 244 IYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRLSSK 303
           ++YG+SDF YAA SM++ G  SS F+L      GL GVW GL +FM LR++AG SRL  +
Sbjct: 486 LHYGMSDFPYAACSMMVVGGISSAFMLYAPAGLGLSGVWVGLSMFMGLRMVAGFSRLMWR 545

Query: 304 RGP 306
           +GP
Sbjct: 546 KGP 548


>AT1G51340.1 | Symbols:  | MATE efflux family protein |
           chr1:19032034-19034681 FORWARD LENGTH=509
          Length = 509

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 175/306 (57%)

Query: 1   MRGPAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXX 60
           M  P+Q++L+LR+ GAPA++++LA QG FRGF DT TPL+A   G+  N+ILDP      
Sbjct: 198 MMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVF 257

Query: 61  XXXXXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVF 120
                        S+YL+  ILLWKL  QV +        +   ++K+G  LL R +AV 
Sbjct: 258 RLGVTGAATAHVISQYLMCGILLWKLMGQVDIFNMSTKHLQFCRFMKNGFLLLMRVIAVT 317

Query: 121 ITMTLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARL 180
             +TL+ S+AA+ G   MA  Q+C+QVWL+ S                +++  +Y +A  
Sbjct: 318 FCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAA 377

Query: 181 IIYRVIQIGLGVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFV 240
              RV+Q+GL +G  L++IL  G      +FT D +VL +   GL FVAG+QP+NALAFV
Sbjct: 378 TASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFV 437

Query: 241 IDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRL 300
            DG+ +G SDF YAA S+V+  + S + LL +    G  G+W GL I+M+LR   G  R+
Sbjct: 438 FDGVNFGASDFGYAAASLVMVAIVSILCLLFLSSTHGFIGLWFGLTIYMSLRAAVGFWRI 497

Query: 301 SSKRGP 306
            +  GP
Sbjct: 498 GTGTGP 503


>AT1G51340.2 | Symbols:  | MATE efflux family protein |
           chr1:19032021-19034681 FORWARD LENGTH=515
          Length = 515

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 175/306 (57%)

Query: 1   MRGPAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXX 60
           M  P+Q++L+LR+ GAPA++++LA QG FRGF DT TPL+A   G+  N+ILDP      
Sbjct: 204 MMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVF 263

Query: 61  XXXXXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVF 120
                        S+YL+  ILLWKL  QV +        +   ++K+G  LL R +AV 
Sbjct: 264 RLGVTGAATAHVISQYLMCGILLWKLMGQVDIFNMSTKHLQFCRFMKNGFLLLMRVIAVT 323

Query: 121 ITMTLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARL 180
             +TL+ S+AA+ G   MA  Q+C+QVWL+ S                +++  +Y +A  
Sbjct: 324 FCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAA 383

Query: 181 IIYRVIQIGLGVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFV 240
              RV+Q+GL +G  L++IL  G      +FT D +VL +   GL FVAG+QP+NALAFV
Sbjct: 384 TASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFV 443

Query: 241 IDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRL 300
            DG+ +G SDF YAA S+V+  + S + LL +    G  G+W GL I+M+LR   G  R+
Sbjct: 444 FDGVNFGASDFGYAAASLVMVAIVSILCLLFLSSTHGFIGLWFGLTIYMSLRAAVGFWRI 503

Query: 301 SSKRGP 306
            +  GP
Sbjct: 504 GTGTGP 509


>AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score =  211 bits (536), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/310 (37%), Positives = 178/310 (57%), Gaps = 8/310 (2%)

Query: 1   MRGPAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXX 60
           M  PA ++L++RA GAPA++++LA+QG FRGF DTKTPL+A    + +N++LDP      
Sbjct: 208 MLSPAHKYLSIRALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVL 267

Query: 61  XXXXXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVF 120
                        S+Y +  IL   L+ +V LIP +F   +   +LK+G  LL RT+AV 
Sbjct: 268 RLGIIGAAIAHVISQYFMTLILFVFLAKKVNLIPPNFGDLQFGRFLKNGLLLLARTIAVT 327

Query: 121 ITMTLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARL 180
              TL  ++AA+LG  PMA  QIC+QVWL+ S                S++  +Y +   
Sbjct: 328 FCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTA 387

Query: 181 IIYRVIQIGLGVGITLSII----LFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNA 236
           +  RV+Q+G  +G+ LS+     L+FG G    +F+ D  V+ +   G+ F+A +QP+N+
Sbjct: 388 VASRVLQMGFVLGLGLSVFVGLGLYFGAG----VFSKDPAVIHLMAIGIPFIAATQPINS 443

Query: 237 LAFVIDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAG 296
           LAFV+DG+ +G SDF Y AYSMV     S   ++ +    G  G+W  L I+M LR + G
Sbjct: 444 LAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITG 503

Query: 297 VSRLSSKRGP 306
           ++R+++  GP
Sbjct: 504 IARMATGTGP 513


>AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score =  211 bits (536), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/310 (37%), Positives = 178/310 (57%), Gaps = 8/310 (2%)

Query: 1   MRGPAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXX 60
           M  PA ++L++RA GAPA++++LA+QG FRGF DTKTPL+A    + +N++LDP      
Sbjct: 208 MLSPAHKYLSIRALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVL 267

Query: 61  XXXXXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVF 120
                        S+Y +  IL   L+ +V LIP +F   +   +LK+G  LL RT+AV 
Sbjct: 268 RLGIIGAAIAHVISQYFMTLILFVFLAKKVNLIPPNFGDLQFGRFLKNGLLLLARTIAVT 327

Query: 121 ITMTLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARL 180
              TL  ++AA+LG  PMA  QIC+QVWL+ S                S++  +Y +   
Sbjct: 328 FCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTA 387

Query: 181 IIYRVIQIGLGVGITLSII----LFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNA 236
           +  RV+Q+G  +G+ LS+     L+FG G    +F+ D  V+ +   G+ F+A +QP+N+
Sbjct: 388 VASRVLQMGFVLGLGLSVFVGLGLYFGAG----VFSKDPAVIHLMAIGIPFIAATQPINS 443

Query: 237 LAFVIDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAG 296
           LAFV+DG+ +G SDF Y AYSMV     S   ++ +    G  G+W  L I+M LR + G
Sbjct: 444 LAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITG 503

Query: 297 VSRLSSKRGP 306
           ++R+++  GP
Sbjct: 504 IARMATGTGP 513