Miyakogusa Predicted Gene
- Lj1g3v2377970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2377970.1 tr|G7KTA1|G7KTA1_MEDTR MATE efflux family protein
expressed OS=Medicago truncatula GN=MTR_7g070210 P,83.52,0,seg,NULL;
MatE,Multi antimicrobial extrusion protein; MATE EFFLUX FAMILY
PROTEIN,NULL; MULTIDRUG RES,CUFF.28967.1
(438 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38330.1 | Symbols: | MATE efflux family protein | chr2:1606... 444 e-125
AT4G38380.1 | Symbols: | MATE efflux family protein | chr4:1797... 336 2e-92
AT1G51340.1 | Symbols: | MATE efflux family protein | chr1:1903... 272 4e-73
AT1G51340.2 | Symbols: | MATE efflux family protein | chr1:1903... 271 5e-73
AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p... 268 4e-72
AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p... 268 4e-72
>AT2G38330.1 | Symbols: | MATE efflux family protein |
chr2:16064571-16067318 FORWARD LENGTH=521
Length = 521
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/416 (55%), Positives = 286/416 (68%), Gaps = 6/416 (1%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDISGAG 82
+DTAFVGHIG+ ELAAVGVS SVFNLVSK+FNVPLLN+TTSFVAEEQA+ +K+++
Sbjct: 100 VDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDN----- 154
Query: 83 ENGKSQNKKXXXXXXXXXXXXXXXGIAETVALSLGSGIIMNIMGIPADSLMRGPAQQFLT 142
+ +KK GIAE +ALSLGS +M++M IP DS MR PA+QFL
Sbjct: 155 -DSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPFDSPMRIPAEQFLR 213
Query: 143 LRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXXXXXXXXXXXX 202
LRA+GAP IV+ALA QG FRGF DT TPLYAV AGN LN +LDP
Sbjct: 214 LRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILIFVLGFGISGAAAA 273
Query: 203 XXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVFITMTLTTSIA 262
SEYLIAFILLWKL++ V+L+ + YLKSGG L+GRT+A+ + TL TS+A
Sbjct: 274 TVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTVALLVPFTLATSLA 333
Query: 263 AKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARLIIYRVIQIGL 322
A+ GP MAGHQI +++WL++S +YS G Y QAR +++ V+Q+GL
Sbjct: 334 AQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLFGVLQVGL 393
Query: 323 GVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFVIDGIYYGVSD 382
G L+ +LF F F+SLFTTDSEVL +A SG LFVAGSQPVNALAFV+DG+YYGVSD
Sbjct: 394 ATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDGLYYGVSD 453
Query: 383 FEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRLSSKRGP 438
F +AAYSMV+ G SS+F+LV P FGL G+W GLF+FM LR++AG RL ++ GP
Sbjct: 454 FGFAAYSMVIVGFISSLFMLVAAPTFGLAGIWTGLFLFMALRLVAGAWRLGTRTGP 509
>AT4G38380.1 | Symbols: | MATE efflux family protein |
chr4:17971855-17974787 REVERSE LENGTH=560
Length = 560
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/423 (43%), Positives = 260/423 (61%), Gaps = 10/423 (2%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDISGAG 82
++TA++G +G+VEL + GVS ++FN +SK+FN+PLL++ TSFVAE+ A I+ ++ A
Sbjct: 129 METAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSVATSFVAEDIAKIAAQDL---AS 185
Query: 83 ENGKSQ-------NKKXXXXXXXXXXXXXXXGIAETVALSLGSGIIMNIMGIPADSLMRG 135
E+ +S +K GI E +ALSL SG + +MGI + S M
Sbjct: 186 EDSQSDIPSQGLPERKQLSSVSTALVLAIGIGIFEALALSLASGPFLRLMGIQSMSEMFI 245
Query: 136 PAQQFLTLRAFGAPAIVIALAVQGTFRGFMDTKTPLYAVGAGNFLNVILDPXXXXXXXXX 195
PA+QFL LRA GAPA V++LA+QG FRGF DTKTP+Y +G GNFL V L P
Sbjct: 246 PARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVYCLGIGNFLAVFLFPLFIYKFRMG 305
Query: 196 XXXXXXXXXXSEYLIAFILLWKLSDQVLLIPFDFDGRKLFSYLKSGGFLLGRTLAVFITM 255
S+Y +A ++L L+ +V+L+P K YLKSGGF+LGRTL+V +TM
Sbjct: 306 VAGAAISSVISQYTVAILMLILLNKRVILLPPKIGSLKFGDYLKSGGFVLGRTLSVLVTM 365
Query: 256 TLTTSIAAKLGPIPMAGHQICMQVWLSISXXXXXXXXXXXXXXXGSYSLGNYAQARLIIY 315
T+ TS+AA+ G MA HQICMQVWL++S S S ++ + +
Sbjct: 366 TVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVTT 425
Query: 316 RVIQIGLGVGITLSIILFFGFGAFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFVIDG 375
V++IG+ GI L+I+L F + LF+ D EVL + R G+LFVA +QP+ ALAF+ DG
Sbjct: 426 FVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFDG 485
Query: 376 IYYGVSDFEYAAYSMVLAGLFSSIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRLSSK 435
++YG+SDF YAA SM++ G SS F+L GL GVW GL +FM LR++AG SRL +
Sbjct: 486 LHYGMSDFPYAACSMMVVGGISSAFMLYAPAGLGLSGVWVGLSMFMGLRMVAGFSRLMWR 545
Query: 436 RGP 438
+GP
Sbjct: 546 KGP 548
>AT1G51340.1 | Symbols: | MATE efflux family protein |
chr1:19032034-19034681 FORWARD LENGTH=509
Length = 509
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 240/454 (52%), Gaps = 38/454 (8%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDISGAG 82
+DTAF+G IG VELAAVGVS ++FN VS++ PL++ITTSFVAEE A S+++ +
Sbjct: 50 VDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDACSSQQDTVRDHK 109
Query: 83 E------NGKSQ--------------------------------NKKXXXXXXXXXXXXX 104
E N ++ K+
Sbjct: 110 ECIEIGINNPTEETIELIPEKHKDSLSDEFKTSSSIFSISKPPAKKRNIPSASSALIIGG 169
Query: 105 XXGIAETVALSLGSGIIMNIMGIPADSLMRGPAQQFLTLRAFGAPAIVIALAVQGTFRGF 164
G+ + V L + +++ MG+ DS M P+Q++L+LR+ GAPA++++LA QG FRGF
Sbjct: 170 VLGLFQAVFLISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGF 229
Query: 165 MDTKTPLYAVGAGNFLNVILDPXXXXXXXXXXXXXXXXXXXSEYLIAFILLWKLSDQVLL 224
DT TPL+A G+ N+ILDP S+YL+ ILLWKL QV +
Sbjct: 230 KDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATAHVISQYLMCGILLWKLMGQVDI 289
Query: 225 IPFDFDGRKLFSYLKSGGFLLGRTLAVFITMTLTTSIAAKLGPIPMAGHQICMQVWLSIS 284
+ ++K+G LL R +AV +TL+ S+AA+ G MA Q+C+QVWL+ S
Sbjct: 290 FNMSTKHLQFCRFMKNGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATS 349
Query: 285 XXXXXXXXXXXXXXXGSYSLGNYAQARLIIYRVIQIGLGVGITLSIILFFGFGAFTSLFT 344
+++ +Y +A RV+Q+GL +G L++IL G +FT
Sbjct: 350 LLADGYAVAGQAILASAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFT 409
Query: 345 TDSEVLDVARSGLLFVAGSQPVNALAFVIDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVV 404
D +VL + GL FVAG+QP+NALAFV DG+ +G SDF YAA S+V+ + S + LL +
Sbjct: 410 KDDKVLHLISIGLPFVAGTQPINALAFVFDGVNFGASDFGYAAASLVMVAIVSILCLLFL 469
Query: 405 GPIFGLPGVWAGLFIFMTLRVLAGVSRLSSKRGP 438
G G+W GL I+M+LR G R+ + GP
Sbjct: 470 SSTHGFIGLWFGLTIYMSLRAAVGFWRIGTGTGP 503
>AT1G51340.2 | Symbols: | MATE efflux family protein |
chr1:19032021-19034681 FORWARD LENGTH=515
Length = 515
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 240/454 (52%), Gaps = 38/454 (8%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDISGAG 82
+DTAF+G IG VELAAVGVS ++FN VS++ PL++ITTSFVAEE A S+++ +
Sbjct: 56 VDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDACSSQQDTVRDHK 115
Query: 83 E------NGKSQ--------------------------------NKKXXXXXXXXXXXXX 104
E N ++ K+
Sbjct: 116 ECIEIGINNPTEETIELIPEKHKDSLSDEFKTSSSIFSISKPPAKKRNIPSASSALIIGG 175
Query: 105 XXGIAETVALSLGSGIIMNIMGIPADSLMRGPAQQFLTLRAFGAPAIVIALAVQGTFRGF 164
G+ + V L + +++ MG+ DS M P+Q++L+LR+ GAPA++++LA QG FRGF
Sbjct: 176 VLGLFQAVFLISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGF 235
Query: 165 MDTKTPLYAVGAGNFLNVILDPXXXXXXXXXXXXXXXXXXXSEYLIAFILLWKLSDQVLL 224
DT TPL+A G+ N+ILDP S+YL+ ILLWKL QV +
Sbjct: 236 KDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATAHVISQYLMCGILLWKLMGQVDI 295
Query: 225 IPFDFDGRKLFSYLKSGGFLLGRTLAVFITMTLTTSIAAKLGPIPMAGHQICMQVWLSIS 284
+ ++K+G LL R +AV +TL+ S+AA+ G MA Q+C+QVWL+ S
Sbjct: 296 FNMSTKHLQFCRFMKNGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATS 355
Query: 285 XXXXXXXXXXXXXXXGSYSLGNYAQARLIIYRVIQIGLGVGITLSIILFFGFGAFTSLFT 344
+++ +Y +A RV+Q+GL +G L++IL G +FT
Sbjct: 356 LLADGYAVAGQAILASAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFT 415
Query: 345 TDSEVLDVARSGLLFVAGSQPVNALAFVIDGIYYGVSDFEYAAYSMVLAGLFSSIFLLVV 404
D +VL + GL FVAG+QP+NALAFV DG+ +G SDF YAA S+V+ + S + LL +
Sbjct: 416 KDDKVLHLISIGLPFVAGTQPINALAFVFDGVNFGASDFGYAAASLVMVAIVSILCLLFL 475
Query: 405 GPIFGLPGVWAGLFIFMTLRVLAGVSRLSSKRGP 438
G G+W GL I+M+LR G R+ + GP
Sbjct: 476 SSTHGFIGLWFGLTIYMSLRAAVGFWRIGTGTGP 509
>AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
protein | chr3:2566593-2569397 REVERSE LENGTH=526
Length = 526
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 242/461 (52%), Gaps = 49/461 (10%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDI---- 78
IDTAFVG +GAV+LAAVGVS ++FN S++ PL+++TTSFVAEE + +E+
Sbjct: 57 IDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKAN 116
Query: 79 -------------------------------------SGAGENGKSQNKKXXXXXXXXXX 101
S +G + K+
Sbjct: 117 LVHAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAMI 176
Query: 102 XXXXXGIAETVALSLGSGIIMNIMGIPADSLMRGPAQQFLTLRAFGAPAIVIALAVQGTF 161
G+ + + L S +++ +MG+ +S M PA ++L++RA GAPA++++LA+QG F
Sbjct: 177 LGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGIF 236
Query: 162 RGFMDTKTPLYAVGAGNFLNVILDPXXXXXXXXXXXXXXXXXXXSEYLIAFILLWKLSDQ 221
RGF DTKTPL+A + +N++LDP S+Y + IL L+ +
Sbjct: 237 RGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLAKK 296
Query: 222 VLLIPFDFDGRKLFSYLKSGGFLLGRTLAVFITMTLTTSIAAKLGPIPMAGHQICMQVWL 281
V LIP +F + +LK+G LL RT+AV TL ++AA+LG PMA QIC+QVWL
Sbjct: 297 VNLIPPNFGDLQFGRFLKNGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWL 356
Query: 282 SISXXXXXXXXXXXXXXXGSYSLGNYAQARLIIYRVIQIGLGVGITLSII----LFFGFG 337
+ S S++ +Y + + RV+Q+G +G+ LS+ L+FG G
Sbjct: 357 TSSLLNDGLAVAGQAILACSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAG 416
Query: 338 AFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFVIDGIYYGVSDFEYAAYSMVLAGLFS 397
+F+ D V+ + G+ F+A +QP+N+LAFV+DG+ +G SDF Y AYSMV S
Sbjct: 417 ----VFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDGVNFGASDFAYTAYSMVGVAAIS 472
Query: 398 SIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRLSSKRGP 438
++ + G G+W L I+M LR + G++R+++ GP
Sbjct: 473 IAAVIYMAKTNGFIGIWIALTIYMALRAITGIARMATGTGP 513
>AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
protein | chr3:2566593-2569397 REVERSE LENGTH=526
Length = 526
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 242/461 (52%), Gaps = 49/461 (10%)
Query: 23 IDTAFVGHIGAVELAAVGVSTSVFNLVSKVFNVPLLNITTSFVAEEQALISKEEDI---- 78
IDTAFVG +GAV+LAAVGVS ++FN S++ PL+++TTSFVAEE + +E+
Sbjct: 57 IDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKAN 116
Query: 79 -------------------------------------SGAGENGKSQNKKXXXXXXXXXX 101
S +G + K+
Sbjct: 117 LVHAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAMI 176
Query: 102 XXXXXGIAETVALSLGSGIIMNIMGIPADSLMRGPAQQFLTLRAFGAPAIVIALAVQGTF 161
G+ + + L S +++ +MG+ +S M PA ++L++RA GAPA++++LA+QG F
Sbjct: 177 LGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGIF 236
Query: 162 RGFMDTKTPLYAVGAGNFLNVILDPXXXXXXXXXXXXXXXXXXXSEYLIAFILLWKLSDQ 221
RGF DTKTPL+A + +N++LDP S+Y + IL L+ +
Sbjct: 237 RGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLAKK 296
Query: 222 VLLIPFDFDGRKLFSYLKSGGFLLGRTLAVFITMTLTTSIAAKLGPIPMAGHQICMQVWL 281
V LIP +F + +LK+G LL RT+AV TL ++AA+LG PMA QIC+QVWL
Sbjct: 297 VNLIPPNFGDLQFGRFLKNGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWL 356
Query: 282 SISXXXXXXXXXXXXXXXGSYSLGNYAQARLIIYRVIQIGLGVGITLSII----LFFGFG 337
+ S S++ +Y + + RV+Q+G +G+ LS+ L+FG G
Sbjct: 357 TSSLLNDGLAVAGQAILACSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAG 416
Query: 338 AFTSLFTTDSEVLDVARSGLLFVAGSQPVNALAFVIDGIYYGVSDFEYAAYSMVLAGLFS 397
+F+ D V+ + G+ F+A +QP+N+LAFV+DG+ +G SDF Y AYSMV S
Sbjct: 417 ----VFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDGVNFGASDFAYTAYSMVGVAAIS 472
Query: 398 SIFLLVVGPIFGLPGVWAGLFIFMTLRVLAGVSRLSSKRGP 438
++ + G G+W L I+M LR + G++R+++ GP
Sbjct: 473 IAAVIYMAKTNGFIGIWIALTIYMALRAITGIARMATGTGP 513