Miyakogusa Predicted Gene

Lj1g3v2372300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2372300.1 tr|Q84V95|Q84V95_LOTCO Pyruvate decarboxylase 1
OS=Lotus corniculatus GN=Pdc1 PE=2 SV=1,99.47,0,seg,NULL; PYRUVATE
DECARBOXYLASE,Thiamine pyrophosphate (TPP)-dependent enzyme; THIAMINE
PYROPHOSPHA,CUFF.28951.1
         (563 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54960.1 | Symbols: PDC2 | pyruvate decarboxylase-2 | chr5:22...   969   0.0  
AT4G33070.1 | Symbols:  | Thiamine pyrophosphate dependent pyruv...   968   0.0  
AT5G01320.1 | Symbols:  | Thiamine pyrophosphate dependent pyruv...   950   0.0  
AT5G01330.1 | Symbols: PDC3 | pyruvate decarboxylase-3 | chr5:13...   909   0.0  

>AT5G54960.1 | Symbols: PDC2 | pyruvate decarboxylase-2 |
           chr5:22310858-22312681 REVERSE LENGTH=607
          Length = 607

 Score =  969 bits (2504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/565 (82%), Positives = 498/565 (88%), Gaps = 3/565 (0%)

Query: 1   MDVKLGSLDTTKPASNDVVSCATANHTTAIQSSIP--STAVSTCDATLGRHLARRLAQIG 58
           MD K+GS+D   P ++D+        +T +Q++ P  ST VS CDATLGR+LARRL +IG
Sbjct: 1   MDTKIGSIDACNPTNHDIGGPPNGGVST-VQNTSPLHSTTVSPCDATLGRYLARRLVEIG 59

Query: 59  VTDVFSVPGDFNLTLLDHLIAEPQLNLVGCCNELNXXXXXXXXXXXXXXXXCVVTFTVGG 118
           VTDVFSVPGDFNLTLLDHLIAEP L L+GCCNELN                CVVTFTVGG
Sbjct: 60  VTDVFSVPGDFNLTLLDHLIAEPNLKLIGCCNELNAGYAADGYARSRGVGACVVTFTVGG 119

Query: 119 LSVLNAIAGAYSENLPLICIVGGPNSNDYGTSRILHHTIGLPDFTQELRCFQTVTCFQAV 178
           LSVLNAIAGAYSENLPLICIVGGPNSNDYGT+RILHHTIGLPDFTQELRCFQ VTCFQAV
Sbjct: 120 LSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAVTCFQAV 179

Query: 179 VNNLEDAHEQIDTAISTALKESKPVYISISCNLPGIPHPTFSRDPVPFSLSAKLSNQMGL 238
           +NNLE+AHE IDTAISTALKESKPVYISISCNLP IP PTFSR PVPF L  K+SNQ+GL
Sbjct: 180 INNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLPTFSRHPVPFMLPMKVSNQIGL 239

Query: 239 EAAVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHP 298
           +AAVEA AEFLNKAVKPVLVGGPK+RVAKA+DAFVELADASGY LAVMPSAKGQVPEHH 
Sbjct: 240 DAAVEAAAEFLNKAVKPVLVGGPKMRVAKAADAFVELADASGYGLAVMPSAKGQVPEHHK 299

Query: 299 HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIA 358
           HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRV I 
Sbjct: 300 HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVTIG 359

Query: 359 NGPAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVPEGKPLKSAPKEPLRVNVMFQHIQ 418
           NGPAFGCVLMKDFL  LAKR+KHNN +YENYHRI+VPEGKPL+  P E LRVNV+FQHIQ
Sbjct: 360 NGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVPEGKPLRDNPNESLRVNVLFQHIQ 419

Query: 419 KMLSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVI 478
            MLS E+AV+AETGDSWFNCQKLKLP GCGYEFQMQYGSIGWSVGATLGYAQA+P +RVI
Sbjct: 420 NMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAMPNRRVI 479

Query: 479 ACIGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEA 538
           ACIGDGSFQVTAQDVSTM+RCGQ TIIFLINNGGYTIEVEIHDGPYNVIKNWNYT  +EA
Sbjct: 480 ACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTAFVEA 539

Query: 539 IHNGEGKCWTSKVFCEEELVEAIAT 563
           IHNGEGKCWT+KV CEEELV+AI T
Sbjct: 540 IHNGEGKCWTAKVRCEEELVKAINT 564


>AT4G33070.1 | Symbols:  | Thiamine pyrophosphate dependent pyruvate
           decarboxylase family protein | chr4:15952519-15954676
           REVERSE LENGTH=607
          Length = 607

 Score =  968 bits (2502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/566 (81%), Positives = 500/566 (88%), Gaps = 5/566 (0%)

Query: 1   MDVKLGSLDTTKPASNDVVSCATANHTTA-IQSSIPSTAVST--CDATLGRHLARRLAQI 57
           MD K+GS+D  KP + DV  C+  N T A I +S+PS+A++   CDATLGRHLARRL Q 
Sbjct: 1   MDTKIGSIDDCKPTNGDV--CSPTNGTVATIHNSVPSSAITINYCDATLGRHLARRLVQA 58

Query: 58  GVTDVFSVPGDFNLTLLDHLIAEPQLNLVGCCNELNXXXXXXXXXXXXXXXXCVVTFTVG 117
           GVTDVFSVPGDFNLTLLDHL+AEP LNL+GCCNELN                CVVTFTVG
Sbjct: 59  GVTDVFSVPGDFNLTLLDHLMAEPDLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVG 118

Query: 118 GLSVLNAIAGAYSENLPLICIVGGPNSNDYGTSRILHHTIGLPDFTQELRCFQTVTCFQA 177
           GLSVLNAIAGAYSENLPLICIVGGPNSNDYGT+RILHHTIGLPDF+QELRCFQTVTC+QA
Sbjct: 119 GLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQA 178

Query: 178 VVNNLEDAHEQIDTAISTALKESKPVYISISCNLPGIPHPTFSRDPVPFSLSAKLSNQMG 237
           VVNNL+DAHEQID AISTALKESKPVYIS+SCNL  IPH TFSRDPVPFSL+ +LSN+MG
Sbjct: 179 VVNNLDDAHEQIDKAISTALKESKPVYISVSCNLAAIPHHTFSRDPVPFSLAPRLSNKMG 238

Query: 238 LEAAVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHH 297
           LEAAVEAT EFLNKAVKPV+VGGPKLRVAKA DAFVELADASGYALA+MPSAKG VPEHH
Sbjct: 239 LEAAVEATLEFLNKAVKPVMVGGPKLRVAKACDAFVELADASGYALAMMPSAKGFVPEHH 298

Query: 298 PHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVI 357
           PHFIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYSLLLKKEKAI+VQPDR+ +
Sbjct: 299 PHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVQPDRITV 358

Query: 358 ANGPAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVPEGKPLKSAPKEPLRVNVMFQHI 417
           ANGP FGC+LM DF + L+KR+K N  AYENYHRIFVPEGKPLK   +EPLRVN MFQHI
Sbjct: 359 ANGPTFGCILMSDFFRELSKRVKRNETAYENYHRIFVPEGKPLKCESREPLRVNTMFQHI 418

Query: 418 QKMLSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 477
           QKMLS ETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQA PEKRV
Sbjct: 419 QKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQASPEKRV 478

Query: 478 IACIGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIE 537
           +A IGDGSFQVT QD+STMLR GQ TIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGL++
Sbjct: 479 LAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 538

Query: 538 AIHNGEGKCWTSKVFCEEELVEAIAT 563
           AIHNGEG CWT+KV  EEELVEAI T
Sbjct: 539 AIHNGEGNCWTAKVRYEEELVEAITT 564


>AT5G01320.1 | Symbols:  | Thiamine pyrophosphate dependent pyruvate
           decarboxylase family protein | chr5:129484-131625
           REVERSE LENGTH=603
          Length = 603

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/563 (80%), Positives = 492/563 (87%), Gaps = 3/563 (0%)

Query: 1   MDVKLGSLDTTKPASNDVVSCATANHTTAIQSSIPSTAVSTCDATLGRHLARRLAQIGVT 60
           MD K+G++DT KP + D+ S   +N    IQ S P T  +T ++TLGRHL+RRL Q GVT
Sbjct: 1   MDTKIGAIDTCKPTTGDIGS-PPSNAVATIQDSAPIT--TTSESTLGRHLSRRLVQAGVT 57

Query: 61  DVFSVPGDFNLTLLDHLIAEPQLNLVGCCNELNXXXXXXXXXXXXXXXXCVVTFTVGGLS 120
           DVFSVPGDFNLTLLDHLIAEP+LN +GCCNELN                CVVTFTVGGLS
Sbjct: 58  DVFSVPGDFNLTLLDHLIAEPELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLS 117

Query: 121 VLNAIAGAYSENLPLICIVGGPNSNDYGTSRILHHTIGLPDFTQELRCFQTVTCFQAVVN 180
           VLNAIAGAYSENLP+ICIVGGPNSND+GT+RILHHTIGLPDF+QELRCFQTVTC+QAVVN
Sbjct: 118 VLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVN 177

Query: 181 NLEDAHEQIDTAISTALKESKPVYISISCNLPGIPHPTFSRDPVPFSLSAKLSNQMGLEA 240
           NLEDAHEQID AI+TALKESKPVYISISCNL   PHPTF+RDPVPF L+ ++SN MGLEA
Sbjct: 178 NLEDAHEQIDKAIATALKESKPVYISISCNLAATPHPTFARDPVPFDLTPRMSNTMGLEA 237

Query: 241 AVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHPHF 300
           AVEAT EFLNKAVKPV+VGGPKLRVAKAS+AF+ELADASGY LAVMPS KG VPE+HPHF
Sbjct: 238 AVEATLEFLNKAVKPVMVGGPKLRVAKASEAFLELADASGYPLAVMPSTKGLVPENHPHF 297

Query: 301 IGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIANG 360
           IGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYSLLLKKEKAIIV PDRVV+ANG
Sbjct: 298 IGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDRVVVANG 357

Query: 361 PAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVPEGKPLKSAPKEPLRVNVMFQHIQKM 420
           P FGCVLM DF + LAKR+K N  AYENY RIFVPEGKPLK  P EPLRVN MFQHIQKM
Sbjct: 358 PTFGCVLMSDFFRELAKRVKRNETAYENYERIFVPEGKPLKCKPGEPLRVNAMFQHIQKM 417

Query: 421 LSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIAC 480
           LS ETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQA PEKRV++ 
Sbjct: 418 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLSF 477

Query: 481 IGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEAIH 540
           IGDGSFQVTAQD+STM+R GQ  IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGL++AIH
Sbjct: 478 IGDGSFQVTAQDISTMIRNGQKAIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIH 537

Query: 541 NGEGKCWTSKVFCEEELVEAIAT 563
           NGEGKCWT+KV  EEELVEAI T
Sbjct: 538 NGEGKCWTTKVRYEEELVEAIKT 560


>AT5G01330.1 | Symbols: PDC3 | pyruvate decarboxylase-3 |
           chr5:132538-134807 REVERSE LENGTH=592
          Length = 592

 Score =  909 bits (2350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/542 (80%), Positives = 474/542 (87%), Gaps = 2/542 (0%)

Query: 24  ANHTTAIQSSIPSTA--VSTCDATLGRHLARRLAQIGVTDVFSVPGDFNLTLLDHLIAEP 81
           +N    IQ S P+ A  + +  ATLGRHL+RRL Q GVTD+F+VPGDFNL+LLD LIA P
Sbjct: 8   SNGVATIQDSAPTAATILGSSAATLGRHLSRRLVQAGVTDIFTVPGDFNLSLLDQLIANP 67

Query: 82  QLNLVGCCNELNXXXXXXXXXXXXXXXXCVVTFTVGGLSVLNAIAGAYSENLPLICIVGG 141
           +LN +GCCNELN                CVVTFTVGGLSVLNAIAGAYSENLP+ICIVGG
Sbjct: 68  ELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGG 127

Query: 142 PNSNDYGTSRILHHTIGLPDFTQELRCFQTVTCFQAVVNNLEDAHEQIDTAISTALKESK 201
           PNSND+GT+RILHHTIGLPDF+QELRCFQTVTC+QAVVN+LEDAHEQID AI+TAL+ESK
Sbjct: 128 PNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNHLEDAHEQIDKAIATALRESK 187

Query: 202 PVYISISCNLPGIPHPTFSRDPVPFSLSAKLSNQMGLEAAVEATAEFLNKAVKPVLVGGP 261
           PVYISISCNL  IPHPTF+  PVPF L+ +LSN+  LEAAVEAT EFLNKAVKPV+VGGP
Sbjct: 188 PVYISISCNLAAIPHPTFASYPVPFDLTPRLSNKDCLEAAVEATLEFLNKAVKPVMVGGP 247

Query: 262 KLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHPHFIGTYWGAVSTAFCAEIVESAD 321
           KLRVAKA DAFVELADASGY +AVMPSAKG VPE+HPHFIGTYWGAVST FC+EIVESAD
Sbjct: 248 KLRVAKARDAFVELADASGYPVAVMPSAKGFVPENHPHFIGTYWGAVSTLFCSEIVESAD 307

Query: 322 AYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIANGPAFGCVLMKDFLKALAKRLKH 381
           AY+FAGPIFNDYSSVGYSLLLKKEKAIIV PD VV+ANGP FGCV M +F + LAKR+K 
Sbjct: 308 AYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDSVVVANGPTFGCVRMSEFFRELAKRVKP 367

Query: 382 NNAAYENYHRIFVPEGKPLKSAPKEPLRVNVMFQHIQKMLSGETAVIAETGDSWFNCQKL 441
           N  AYENYHRIFVPEGKPLK  P+EPLR+N MFQHIQKMLS ETAVIAETGDSWFNCQKL
Sbjct: 368 NKTAYENYHRIFVPEGKPLKCKPREPLRINAMFQHIQKMLSNETAVIAETGDSWFNCQKL 427

Query: 442 KLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIACIGDGSFQVTAQDVSTMLRCGQ 501
           KLP+GCGYEFQMQYGSIGWSVGATLGYAQA PEKRV++ IGDGSFQVTAQDVSTM+R GQ
Sbjct: 428 KLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRVLSFIGDGSFQVTAQDVSTMIRNGQ 487

Query: 502 NTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEAIHNGEGKCWTSKVFCEEELVEAI 561
            TIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGL++AIHNGEGKCWT+KV  EEELVEAI
Sbjct: 488 KTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAI 547

Query: 562 AT 563
            T
Sbjct: 548 NT 549