Miyakogusa Predicted Gene

Lj1g3v2372280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2372280.1 Non Chatacterized Hit- tr|Q1PES0|Q1PES0_ARATH
Putative uncharacterized protein OS=Arabidopsis thalia,63.38,2e-19,
,CUFF.28954.1
         (1009 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08960.1 | Symbols:  | ARM repeat superfamily protein | chr3:...  1526   0.0  
AT1G26170.1 | Symbols:  | ARM repeat superfamily protein | chr1:...    71   3e-12
AT3G59020.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    54   4e-07
AT3G59020.2 | Symbols:  | ARM repeat superfamily protein | chr3:...    54   5e-07

>AT3G08960.1 | Symbols:  | ARM repeat superfamily protein |
            chr3:2730405-2736762 REVERSE LENGTH=1010
          Length = 1010

 Score = 1526 bits (3951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 732/1010 (72%), Positives = 848/1010 (83%), Gaps = 1/1010 (0%)

Query: 1    MAVSTSDVAAMYSLLSNSMSADHRHRGPAEQALTQSESRPGFCSCLLEVITAKDLAAQVD 60
            MA+S SD+ AMY+LL+NSMS D   R PAE AL+ SESRPGFCSCL+EVI +KDL + VD
Sbjct: 1    MALSASDLPAMYTLLANSMSGDETVRRPAEAALSLSESRPGFCSCLMEVIASKDLVSHVD 60

Query: 61   VRLMATVYFKNSINRYWRHRRYSSGISNEEKIHLRQKLLMHLREENDQIALMLAVLISKI 120
            VRLMA+VYFKNSINR+W+ RR S  +SNEEK HLRQKLL HLREEN QIA MLAVLISKI
Sbjct: 61   VRLMASVYFKNSINRHWKSRRNSWSMSNEEKSHLRQKLLSHLREENYQIAEMLAVLISKI 120

Query: 121  ARIDYPKEWPDIFLILSQQLQSADILASHRIFMILFRTLKELSTKRLTADQRHFAEISSH 180
            AR DYP+EWPD+F +L+QQL SAD+LASHRIF+ILFRTLKELSTKRLTADQ+ FAEISS 
Sbjct: 121  ARFDYPREWPDLFSVLAQQLHSADVLASHRIFLILFRTLKELSTKRLTADQKTFAEISSQ 180

Query: 181  FFDYSWRLWQSDVQTILHGFSTLSQSFNSNAEDQHHD-LYLTCERWLLCSKIIRQLVISG 239
            FFD+SW LWQ+DVQTILHGFST+ QS+ SN+ +QHHD L+LTCERW LC KI+RQL+ISG
Sbjct: 181  FFDFSWHLWQTDVQTILHGFSTMVQSYGSNSAEQHHDELFLTCERWFLCLKIVRQLIISG 240

Query: 240  FQSDSKCFQEVRPVKEVSPVLLSSIQSLLPYYSTFQKQYPKFWDFLKRTCTKLMKILVAF 299
            F SD+   QE++PVKEVSP LL++ QS LPYYS+FQ + PKFW+F+K+ C KLMK+L A 
Sbjct: 241  FLSDANNIQEIQPVKEVSPALLNAAQSFLPYYSSFQNRDPKFWEFVKKACVKLMKVLGAI 300

Query: 300  QGRHPYSFGDKFVLSSVMDFCLNRITDPEPYLLSFEQFLIQCMVMIKNILECKEYKPTLT 359
            Q RHP+SFGDK  L  V+DFCLN+ITDPE  LL FE F IQCMVM+K++LECKEYKP+ T
Sbjct: 301  QSRHPFSFGDKCALPVVVDFCLNKITDPEQALLPFEDFFIQCMVMVKSVLECKEYKPSRT 360

Query: 360  GRVMDENGVTLEQIKKNIXXXXXXXXXXXXPNERIVLLCNVLIQRYFVLTASDLEEWYRN 419
            GRVMD+NG T EQ KKN             PNERIVLLCNVL++RYFVLTASDLEEWY+N
Sbjct: 361  GRVMDDNGDTFEQRKKNASNTVGGIVSSLLPNERIVLLCNVLVRRYFVLTASDLEEWYQN 420

Query: 420  PESFHHEQDMVQWTEKLRPCAEALYIVLFENYSQLLCPVVVSLLQEAMNSCPTSVTEITP 479
            PESFHHEQDM+QWTEKLRPCAEALY+VLFENYSQLL P+VVS+LQEAMN+CP SVTEITP
Sbjct: 421  PESFHHEQDMIQWTEKLRPCAEALYMVLFENYSQLLGPIVVSILQEAMNNCPPSVTEITP 480

Query: 480  XXXXXXXXXXXXXXXXXXXSNYLSFKDWFNGALSPELSNEHPNSRIIHRKVAVILGQWVS 539
                               SNYL+F+DWFNGALS ELSN+HPN RIIHRKVA+ILG WVS
Sbjct: 481  ALLLKDAAYAATAYVYYELSNYLNFRDWFNGALSLELSNDHPNRRIIHRKVAMILGHWVS 540

Query: 540  EIKDDTKRPVYCALIRLLQGNDLSVRLAACRSMCLHIEDANFSDKEFVDLLPNCWESCFK 599
            EIKDDTKR VYCALI+LLQ NDL+V+LAA RS+CLH+EDANFS++ F+DLLP CW+SCFK
Sbjct: 541  EIKDDTKRAVYCALIKLLQDNDLAVKLAASRSLCLHVEDANFSEQSFLDLLPICWDSCFK 600

Query: 600  LFEEVQEFDSKVQILNLISILIGHVSEVIPFANKLVQFFQKVWEESSGESLLQIQLLVAL 659
            + E VQEFDSKVQILNLIS LIGHVSEVIP+A KLVQFFQKVWEESSGESLLQIQLLVAL
Sbjct: 601  MVEVVQEFDSKVQILNLISTLIGHVSEVIPYAQKLVQFFQKVWEESSGESLLQIQLLVAL 660

Query: 660  RNFVVALGYQSPICYNILLPILENGIDINSPDELNLLEDSMLLWEATLSQAPSMVPQLLS 719
            RNFV+ALGYQSPICY+ILLPIL+ GIDINSPD LNLLEDSM LWE TLS AP MVPQLL+
Sbjct: 661  RNFVIALGYQSPICYSILLPILQKGIDINSPDSLNLLEDSMALWETTLSYAPMMVPQLLA 720

Query: 720  YFSRLVAIMERNFDHLQVAVNIIEDYIILGGNDFLSMHATNIAKILDLIVGNVSDKGLLS 779
             F  +V I+ER+FDHLQVAV+I++ YIIL G +FL+MHA+++AKILDLIVGNV+DKGLLS
Sbjct: 721  LFPYMVEIIERSFDHLQVAVSIMDSYIILDGGEFLNMHASSVAKILDLIVGNVNDKGLLS 780

Query: 780  VLPVIDILIQCFPMEVPPLISSALQKLIIVCLSGGDDRDPSKTSVKASSAAILARLLVMN 839
            +LPVIDIL+QCFP+EVPPLISS LQKL+I+CLSGGDDRDPSKT+VK SSAAILAR+LVMN
Sbjct: 781  ILPVIDILVQCFPVEVPPLISSCLQKLVIICLSGGDDRDPSKTAVKVSSAAILARILVMN 840

Query: 840  TNSLAQLASDPSTSLLLQAASIPIQENILLCLVDIWVDKVDNVSSIQKKAIGLALSIILT 899
            T  LAQL SD S S+LLQ A +P+++NILLCL+DIW+DKVD+ S +Q+K  GLALSIILT
Sbjct: 841  TTYLAQLTSDSSLSVLLQQAGVPVEDNILLCLIDIWLDKVDHASPMQQKTFGLALSIILT 900

Query: 900  LRLPQVLDKLDQILSVCTSVILGRSDDLTXXXXXXXXXXXXXXXXGSIPSKEFRKRQIKF 959
            LR+PQVLDKLD ILS CTSVILG + DLT                 + PSKE RK QIK 
Sbjct: 901  LRMPQVLDKLDLILSTCTSVILGENKDLTEEESSGDMSSSRSQGEETPPSKELRKSQIKV 960

Query: 960  SDSINQLSLEDSVRENLQTCAAIHGESFNAAMSSMHPSAFAQLKQALKMP 1009
            SD I Q+SLE+S RENLQTC+ +HG++FN+A+S MHPSA AQ+KQALK+P
Sbjct: 961  SDPIYQMSLENSTRENLQTCSTLHGDAFNSAISRMHPSALAQVKQALKLP 1010


>AT1G26170.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:9047539-9054438 REVERSE LENGTH=1022
          Length = 1022

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 15  LSNSMSADHRHRGPAEQALTQSESRPGFCSCLLEVITAKDLAAQVDVRLMATVYFKNSIN 74
           LS S+  +   R  AE +L Q+  +PGF S L  V   KDL+  + +R +A V  K  I 
Sbjct: 14  LSASLDPNQNVRSFAETSLNQASLQPGFGSALCRVAANKDLS--LGLRQLAAVLLKQFIK 71

Query: 75  RYWRHRRYSSG---ISNEEKIHLRQKLLMHLREENDQIALMLAVLISKIARIDYPKEWPD 131
           ++WR    +     +S+EEK  +R +LL  L + + +I   +++ IS IA  D+P+EWP+
Sbjct: 72  KHWRENEEAFEYPLVSSEEKALIRGQLLGSLDDSHRKICTAISMDISSIATYDWPEEWPE 131

Query: 132 I 132
           +
Sbjct: 132 L 132


>AT3G59020.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1029
          Length = 1029

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 18  SMSADHRHRGPAEQALTQSESRPGFCSCLLEVITAKDLAAQVDVRLMATVYFKNSINRYW 77
           + S +   R  AEQ+L Q +  P     +L++I   D  + + VR  A+++FKN I ++W
Sbjct: 14  AFSPNPDERRAAEQSLNQLQHTPQHLIRILQIIV--DGGSDLSVRQSASIHFKNFIAKHW 71

Query: 78  R-HRRYSSGISNEEKIHLRQKLLMHLREENDQIALMLAVLISKIARIDYPKEWPDIFLIL 136
             H    + I   +K  +R ++L+ + +    + + +   +  I   DYP++WP++   +
Sbjct: 72  EPHSGDQNIILPSDKNVVRNQILVFVSQVPPILRVQMGECLKTIIYADYPEQWPELLDWV 131

Query: 137 SQQLQSADILASHRIFMIL 155
            Q LQ   +  +  +  IL
Sbjct: 132 KQNLQKPQVYGALFVLRIL 150


>AT3G59020.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1030
          Length = 1030

 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 18  SMSADHRHRGPAEQALTQSESRPGFCSCLLEVITAKDLAAQVDVRLMATVYFKNSINRYW 77
           + S +   R  AEQ+L Q +  P     +L++I   D  + + VR  A+++FKN I ++W
Sbjct: 14  AFSPNPDERRAAEQSLNQLQHTPQHLIRILQIIV--DGGSDLSVRQSASIHFKNFIAKHW 71

Query: 78  R-HRRYSSGISNEEKIHLRQKLLMHLREENDQIALMLAVLISKIARIDYPKEWPDIFLIL 136
             H    + I   +K  +R ++L+ + +    + + +   +  I   DYP++WP++   +
Sbjct: 72  EPHSGDQNIILPSDKNVVRNQILVFVSQVPPILRVQMGECLKTIIYADYPEQWPELLDWV 131

Query: 137 SQQLQSADILASHRIFMIL 155
            Q LQ   +  +  +  IL
Sbjct: 132 KQNLQKPQVYGALFVLRIL 150