Miyakogusa Predicted Gene

Lj1g3v2372140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2372140.1 Non Chatacterized Hit- tr|C6TML7|C6TML7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17255 PE,90.19,0,ChlG:
chlorophyll synthase ChlG,Chlorophyll synthase, ChlG; chlor_syn_BchG:
bacteriochlorophyll/chlo,CUFF.28957.1
         (377 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51820.1 | Symbols: ATG4, G4, CHLG | UbiA prenyltransferase f...   575   e-164
AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    66   5e-11
AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    64   2e-10
AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate p...    57   2e-08

>AT3G51820.1 | Symbols: ATG4, G4, CHLG | UbiA prenyltransferase
           family protein | chr3:19216301-19218934 REVERSE
           LENGTH=387
          Length = 387

 Score =  575 bits (1481), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 304/380 (80%), Positives = 324/380 (85%), Gaps = 24/380 (6%)

Query: 1   MASLVNMVSVSPRILSPTTTRAPSVQSRPVLS-PFSDS--FTRRR--------------L 43
           M S++N VS      +  ++R  SV    VLS   SDS  FTRRR               
Sbjct: 1   MTSILNTVS------TIHSSRVTSVDRVGVLSLRNSDSVEFTRRRSGFSTLIYESPGRRF 54

Query: 44  TVRAAETDANEVKSQAPDKAPAKNGSAFNQLLGIKGASQETNKWKIRLQLTKPVTWPPLV 103
            VRAAETD ++VKSQ PDKAPA  GS+ NQLLGIKGASQETNKWKIRLQLTKPVTWPPLV
Sbjct: 55  VVRAAETDTDKVKSQTPDKAPA-GGSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPLV 113

Query: 104 WGVVCGAAASGNFEWNFEDVAKSIMCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIP 163
           WGVVCGAAASGNF W  EDVAKSI+CMMMSGP LTGYTQT+NDWYDR+IDAINEPYRPIP
Sbjct: 114 WGVVCGAAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIP 173

Query: 164 SGAISENEVITQIWVLLLGGLTFAGILDIWAGHDFPIVFYLALGGSLLSYIYSAPPLKLK 223
           SGAISE EVITQ+WVLLLGGL  AGILD+WAGH  P VFYLALGGSLLSYIYSAPPLKLK
Sbjct: 174 SGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLK 233

Query: 224 QNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDR 283
           QNGW+GNFALGASYISLPWWAGQALFGTLTPD++VLTLLYSIAGLGIAIVNDFKSVEGDR
Sbjct: 234 QNGWVGNFALGASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDR 293

Query: 284 ALGLQSLPVAFGSETAKWICVGAIDITQLSIAGYLLGAGKPYYALALVGLIAPQVFFQFK 343
           ALGLQSLPVAFG+ETAKWICVGAIDITQLS+AGYLL +GKPYYALALV LI PQ+ FQFK
Sbjct: 294 ALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFK 353

Query: 344 YFLKDPVKYDVKYQASAQPF 363
           YFLKDPVKYDVKYQASAQPF
Sbjct: 354 YFLKDPVKYDVKYQASAQPF 373


>AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=386
          Length = 386

 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 140/345 (40%), Gaps = 71/345 (20%)

Query: 5   VNMVSVSPRILSPTTTRAPSVQ------SRPVLSPFSDSFTRRRLTVRAAETDANEVKSQ 58
           V   S++PR L+ +    PSV       S P    F+ S +  R+  +   T+  ++  +
Sbjct: 11  VRFSSLAPRFLAASHHHRPSVHLAGKFISLPRDVRFT-SLSTSRMRSKFVSTNYRKISIR 69

Query: 59  APDKAPAKNGSAFNQLLGIKGASQETNKWKIRLQLTKPVTW----PPLVWGVVCGAAA-- 112
           A  +                GA++  +    R+   +   W    P  + G   G+ A  
Sbjct: 70  ACSQV---------------GAAESDDPVLDRIARFQNACWRFLRPHTIRGTALGSTALV 114

Query: 113 -------SGNFEWNFEDVAKSIMCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSG 165
                  +   +W+    A S +  ++ G    GY   +N  YD  ID +N+PY PI +G
Sbjct: 115 TRALIENTHLIKWSLVLKALSGLLALICG---NGYIVGINQIYDIGIDKVNKPYLPIAAG 171

Query: 166 AISENEVITQIWVLLLGGLTFAGILDIWAGHDF-PIVFYLALGGSLLSYIYSAPPLKLKQ 224
            +S    +   W+L++     AG+L +  G +F P +  L   G  L  IYS PPL++K+
Sbjct: 172 DLS----VQSAWLLVI-FFAIAGLLVV--GFNFGPFITSLYSLGLFLGTIYSVPPLRMKR 224

Query: 225 ------------NGWIGNFAL---GASYISLPW-WAGQALFGTLTPDIIVLTLLYSIAGL 268
                        G++ NF +     + + LP+ W+    F         +T   ++  L
Sbjct: 225 FPVAAFLIIATVRGFLLNFGVYHATRAALGLPFQWSAPVAF---------ITSFVTLFAL 275

Query: 269 GIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDITQLS 313
            IAI  D   VEGDR   + +L    G     ++  G + +  +S
Sbjct: 276 VIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVS 320


>AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=393
          Length = 393

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 70/348 (20%)

Query: 5   VNMVSVSPRILSPTTTRAPSVQ------SRPVLSPFSDSFTRRRLTVRAAETDANE---V 55
           V   S++PR L+ +    PSV       S P    F+   T R   +  A T  +    V
Sbjct: 11  VRFSSLAPRFLAASHHHRPSVHLAGKFISLPRDVRFTSLSTSRMRILAVALTFKSRCVYV 70

Query: 56  KSQAPDKAPAKNGSAFNQLLGIKGASQETNKWKIRLQLTKPVTW----PPLVWGVVCGAA 111
             + P           +Q+L   GA++  +    R+   +   W    P  + G   G+ 
Sbjct: 71  NYEIPK----------DQIL--VGAAESDDPVLDRIARFQNACWRFLRPHTIRGTALGST 118

Query: 112 A---------SGNFEWNFEDVAKSIMCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPI 162
           A         +   +W+    A S +  ++ G    GY   +N  YD  ID +N+PY PI
Sbjct: 119 ALVTRALIENTHLIKWSLVLKALSGLLALICG---NGYIVGINQIYDIGIDKVNKPYLPI 175

Query: 163 PSGAISENEVITQIWVLLLGGLTFAGILDIWAGHDF-PIVFYLALGGSLLSYIYSAPPLK 221
            +G +S    +   W+L++     AG+L +  G +F P +  L   G  L  IYS PPL+
Sbjct: 176 AAGDLS----VQSAWLLVI-FFAIAGLLVV--GFNFGPFITSLYSLGLFLGTIYSVPPLR 228

Query: 222 LKQ------------NGWIGNFAL---GASYISLPW-WAGQALFGTLTPDIIVLTLLYSI 265
           +K+             G++ NF +     + + LP+ W+    F         +T   ++
Sbjct: 229 MKRFPVAAFLIIATVRGFLLNFGVYHATRAALGLPFQWSAPVAF---------ITSFVTL 279

Query: 266 AGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDITQLS 313
             L IAI  D   VEGDR   + +L    G     ++  G + +  +S
Sbjct: 280 FALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVS 327


>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate
           phytyltransferase 1 | chr2:8207491-8210047 FORWARD
           LENGTH=393
          Length = 393

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 28/219 (12%)

Query: 120 FEDVAKSIMCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVL 179
           F  + ++++  +M   ++ G    LN   D EID +N+PY P+ SG  S N  I  +   
Sbjct: 135 FTGILEAVVAALMMNIYIVG----LNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIV--- 187

Query: 180 LLGGLTFAGILDIWAG---HDFPIVFYLALGGSL-LSYIYSAPPLKLKQNGWIGN---FA 232
                +F+ I+  W G     +P+ + L +   L  +Y  + P L+ K+   +      A
Sbjct: 188 ----ASFS-IMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILA 242

Query: 233 LGASYISLPWWAG--QALFGT---LTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGL 287
           + A  + + ++      +FG     T  +I  T   S   + IA+  D   +EGD+  G+
Sbjct: 243 VRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGI 302

Query: 288 QSLPVAFGSETAKWICVGAIDITQLSIA-GYLLGAGKPY 325
           +S  V  G +   W CV    + Q++ A   L+GA  P+
Sbjct: 303 RSFSVTLGQKRVFWTCV---TLLQMAYAVAILVGATSPF 338