Miyakogusa Predicted Gene

Lj1g3v2372130.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2372130.2 Non Chatacterized Hit- tr|I1KKG6|I1KKG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23437
PE,74.4,0,seg,NULL; SCO1/SENC,Copper chaperone SCO1/SenC;
SCO1-SenC,Copper chaperone SCO1/SenC; Thioredoxin-li,CUFF.28928.2
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08950.1 | Symbols: HCC1 | electron transport SCO1/SenC famil...   381   e-106
AT4G39740.1 | Symbols:  | Thioredoxin superfamily protein | chr4...   158   5e-39

>AT3G08950.1 | Symbols: HCC1 | electron transport SCO1/SenC family
           protein | chr3:2727285-2729289 FORWARD LENGTH=334
          Length = 334

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/283 (66%), Positives = 219/283 (77%), Gaps = 24/283 (8%)

Query: 53  GNGVLVMCQRFLSSAAADSNQEKPASDNSSKDDSGQGKESGGEQDQKSD----------- 101
           G  +L M QR L S +A        SD +SK DSG+ +    E+++KS            
Sbjct: 59  GIEMLKMDQRCLLSTSA--------SDTTSKHDSGKPETKSSEKNEKSGGSESSDGGSDH 110

Query: 102 -----AGKSVRGSPISWLSFVLLVLTGAGVVFYYDREKKRHIEDINNASEAVKHGPSAGK 156
                +GK VRG P+SW+SF LL  TGAG+V+YYD +KKRHIEDIN  S AVK GPSAGK
Sbjct: 111 KNERASGKDVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGK 170

Query: 157 AAIGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLAVAVDKIKEKSGI 216
           AAIGGPF L    GKRVTEK+ +GKWT++YFGFTHCPDICPDEL KLA A+DKIKE SG+
Sbjct: 171 AAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGV 230

Query: 217 EIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSD 276
           ++VPVFISVDPERDTV+QV EYVKEFHPKLIGLTGS +EIKSVAR+YRVYYMKT EEDSD
Sbjct: 231 DVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSD 290

Query: 277 YLVDHSIVMYLMGPDMNYVKFFGKNNDADSLADGIVKEIKQYK 319
           YLVDHSIVMYLM P+MN+VKF+GKN+D DSL DG+VKEI+QY+
Sbjct: 291 YLVDHSIVMYLMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQYR 333


>AT4G39740.1 | Symbols:  | Thioredoxin superfamily protein |
           chr4:18435586-18437095 REVERSE LENGTH=276
          Length = 276

 Score =  158 bits (399), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 108/157 (68%)

Query: 159 IGGPFHLTNHHGKRVTEKDFLGKWTVMYFGFTHCPDICPDELQKLAVAVDKIKEKSGIEI 218
           IGGPF L +   K VTE DF GKW ++YFG++  PD+ P++L+ ++ AVDK++ K   +I
Sbjct: 115 IGGPFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKLESKHNEKI 174

Query: 219 VPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGSSDEIKSVARAYRVYYMKTAEEDSDYL 278
           +PVF+++DP+RDT   +  Y+KEF  +++GLTG++  ++ +A+ YRVY+ K  E+  DYL
Sbjct: 175 LPVFVTLDPQRDTPSHLHAYLKEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDGEDYL 234

Query: 279 VDHSIVMYLMGPDMNYVKFFGKNNDADSLADGIVKEI 315
           VD S  MYL+ P M  V+ FG   + D L+  ++KE+
Sbjct: 235 VDTSHNMYLINPKMEIVRCFGVEYNPDELSQELLKEV 271