Miyakogusa Predicted Gene

Lj1g3v2327870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2327870.1 tr|G7JX91|G7JX91_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_5g057710 PE=4
SV=1,43.56,0.00000000004,F_box_assoc_1: F-box protein interaction
domain,F-box associated interaction domain,gene.g32987.t1.1
         (230 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23880.1 | Symbols:  | F-box and associated interaction domai...   107   5e-24
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ...    97   1e-20
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ...    97   1e-20
AT3G06240.1 | Symbols:  | F-box family protein | chr3:1887336-18...    96   2e-20
AT3G07870.1 | Symbols:  | F-box and associated interaction domai...    80   1e-15
AT4G22390.1 | Symbols:  | F-box associated ubiquitination effect...    77   1e-14
AT1G33530.1 | Symbols:  | F-box family protein | chr1:12159884-1...    51   7e-07
AT2G30380.1 | Symbols:  | Plant protein of unknown function (DUF...    50   1e-06
AT4G17780.1 | Symbols:  | F-box and associated interaction domai...    50   2e-06
AT3G20620.1 | Symbols:  | F-box family protein-related | chr3:71...    49   3e-06
AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | F-box and associate...    49   3e-06
AT1G32600.1 | Symbols:  | F-box associated ubiquitination effect...    49   4e-06

>AT3G23880.1 | Symbols:  | F-box and associated interaction
           domains-containing protein | chr3:8622061-8623155
           REVERSE LENGTH=364
          Length = 364

 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 16/211 (7%)

Query: 26  YGFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVYTLGSDSWRQIQDFPSGVPFDETGR 85
           YGFGYD   D YKVVA+            K + K+Y+     WR    FPSGV   +  R
Sbjct: 159 YGFGYDESEDDYKVVALL-----QQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSR 213

Query: 86  ---FVSGSLNWLASVDSSWVIVSL-DLGKECYQELSLPDC---GDAALTLGVLRDCLCIV 138
              +++G+LNW A+  SS   +   D+ ++ ++EL  P C   G   +TLG LR CL +V
Sbjct: 214 SGIYINGTLNWAATSSSSSWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMV 273

Query: 139 TH-HYEFSDVWLMKEYGNKESWTKIFSVPSMGEQSPYTKTLHISEDDEVLLEFQSQLVVY 197
            +     +DVW+MKE+G   SW+K+ S+P + +   + + L IS+   VLLEF+S L +Y
Sbjct: 274 CYCKGANADVWVMKEFGEVYSWSKLLSIPGLTD---FVRPLWISDGLVVLLEFRSGLALY 330

Query: 198 NFRDCTFKTPQIQNITSWMVPDVYVESLISP 228
           N  +  F  P   +I+      VY+++++SP
Sbjct: 331 NCSNGRFHYPVSNSISGCRDAKVYLKTMVSP 361


>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
           domains-containing protein | chr4:7441815-7443157
           FORWARD LENGTH=413
          Length = 413

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 28/235 (11%)

Query: 23  YTIYGFGYDHFSDSYKVVAVFCYECDSGSG---GYKTQVKVYTLGSDSWRQIQDFPSGVP 79
           Y  YG GYD  SD YKVV +  ++ DS       +  +VKV++L  +SW++I+   S + 
Sbjct: 137 YVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQ 196

Query: 80  F-----------DETGRFVSGSLNWLASVDSSWV----IVSLDLGKECYQELSLPDCG-- 122
                          G     SL+W+       +    IV  DL  E ++ +  P+    
Sbjct: 197 LLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVAN 256

Query: 123 ---DAALTLGVLRDCLCIVTHHYE-FSDVWLMKEYGNKESWTKIFSV--PSMGEQSPYTK 176
              D  + +GVL  CLC++ ++ + + DVW+MKEY  ++SWTK+F+V  P   +   Y +
Sbjct: 257 GNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMR 316

Query: 177 TLHISED-DEVLLEF-QSQLVVYNFRDCTFKTPQIQNITSWMVPDVYVESLISPC 229
            L  S+D  +VLLE   ++LV ++       T +I++  S    ++ V SL+  C
Sbjct: 317 PLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLVLGC 371


>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
           domains-containing protein | chr4:7441815-7443157
           FORWARD LENGTH=413
          Length = 413

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 28/235 (11%)

Query: 23  YTIYGFGYDHFSDSYKVVAVFCYECDSGSG---GYKTQVKVYTLGSDSWRQIQDFPSGVP 79
           Y  YG GYD  SD YKVV +  ++ DS       +  +VKV++L  +SW++I+   S + 
Sbjct: 137 YVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQ 196

Query: 80  F-----------DETGRFVSGSLNWLASVDSSWV----IVSLDLGKECYQELSLPDCG-- 122
                          G     SL+W+       +    IV  DL  E ++ +  P+    
Sbjct: 197 LLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVAN 256

Query: 123 ---DAALTLGVLRDCLCIVTHHYE-FSDVWLMKEYGNKESWTKIFSV--PSMGEQSPYTK 176
              D  + +GVL  CLC++ ++ + + DVW+MKEY  ++SWTK+F+V  P   +   Y +
Sbjct: 257 GNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMR 316

Query: 177 TLHISED-DEVLLEF-QSQLVVYNFRDCTFKTPQIQNITSWMVPDVYVESLISPC 229
            L  S+D  +VLLE   ++LV ++       T +I++  S    ++ V SL+  C
Sbjct: 317 PLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLVLGC 371


>AT3G06240.1 | Symbols:  | F-box family protein |
           chr3:1887336-1888619 FORWARD LENGTH=427
          Length = 427

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 36/249 (14%)

Query: 2   GTTNDLDEKLRSLENPRREGSYTIYGFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVY 61
           G +  L E  R         ++  YGFG+D  +D YK+V +     D           VY
Sbjct: 190 GDSKRLPENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDI------LDASVY 243

Query: 62  TLGSDSWRQIQD---------FPSGVPFDETGRFVSGSLNWL--ASVDSSWVIVSLDLGK 110
           +L +DSWR+I +         + SGV F+       G+++W+   S  +  V+V+ D+  
Sbjct: 244 SLKADSWRRICNLNYEHNDGSYTSGVHFN-------GAIHWVFTESRHNQRVVVAFDIQT 296

Query: 111 ECYQELSLPDCGD------AALTLGVLRDCLCIVTHHYEF-SDVWLMKEYGNKESWTKIF 163
           E ++E+ +PD  +      +   +G L   LC+V   Y+   D+W+M EYG  +SW++I 
Sbjct: 297 EEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIR 356

Query: 164 SVPSMGEQSPYTKTLHISEDDEVLLEFQSQLVVYNFRDCTFKTPQI--QNITSWMVPDVY 221
                    P   T     D+EVLLE    LV+YNF         I    ++     + Y
Sbjct: 357 INLLYRSMKPLCST---KNDEEVLLELDGDLVLYNFETNASSNLGICGVKLSDGFEANTY 413

Query: 222 VESLISPCS 230
           VESLISP S
Sbjct: 414 VESLISPNS 422


>AT3G07870.1 | Symbols:  | F-box and associated interaction
           domains-containing protein | chr3:2510871-2512124
           FORWARD LENGTH=417
          Length = 417

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 47/260 (18%)

Query: 13  SLENPRREGSY----TIYGFGYDHFSDSYKVVAVFCYECDS--GSGGYK---------TQ 57
           SLE P     Y     ++GFG+   +  YKV+ +  +   S   +G Y+         ++
Sbjct: 148 SLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSE 207

Query: 58  VKVYTLGSD------SWRQIQDFPSGVPFDETGRFVSGSLNWLASVDSS---WVIVSLDL 108
           V++ TL S       SWR +   P       +   V+G L+++            VS DL
Sbjct: 208 VQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDL 267

Query: 109 GKECYQELSLPDCGDAALT---LGVLRDCLCIVTH-HYEFSDVWLMKEYGNKESWTKIFS 164
             E ++E+  PDCG    T   L  L+ CLC V + +Y   D+W+MK YG KESW K +S
Sbjct: 268 EDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYS 327

Query: 165 VPSM------------------GEQSPYTKTLHISEDDEVLLEFQSQ-LVVYNFRDCTFK 205
           + +                    E     + L + E+ E+LLE++S+ LV Y+ +   FK
Sbjct: 328 IGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFK 387

Query: 206 TPQIQNITSWMVPDVYVESL 225
                 + +W    V+  +L
Sbjct: 388 DLLFHGLPNWFHTVVHAGTL 407


>AT4G22390.1 | Symbols:  | F-box associated ubiquitination effector
           family protein | chr4:11813757-11815074 REVERSE
           LENGTH=402
          Length = 402

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 28/247 (11%)

Query: 11  LRSLENPRRE--GSYTIYGFGYDHFSDSYKVVAVFCYECDSGSGGYK--TQVKVYTLGSD 66
           +  ++ P R+    Y  YG GYD   D +KVV +   +   G   +    +VKV++L  +
Sbjct: 123 IEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKN 182

Query: 67  SWRQ-----------IQDFPSGVPFDETGRFVSGSLNWL----ASVDSSWVIVSLDLGKE 111
           SW++           I  +   +P    G  V+  L+W+      V +   I+  DL  +
Sbjct: 183 SWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASD 242

Query: 112 CYQELSLPD--CGDAALTLGVLRDCLCIVTH-HYEFSDVWLMKEYGNKESWTKIFSVPSM 168
               LS P     +  + +GVL  C+C++ +  Y   DVW++KEY + +SWTK++ VP  
Sbjct: 243 DIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRVPKP 302

Query: 169 G--EQSPYTKTLHISED-DEVLLEFQ--SQLVVYNFRDCTFKTPQIQNITSWMVPDVYVE 223
              E   + + L  S+D  ++LLE    + L+ ++    +  T  I+  +S+   D+ V 
Sbjct: 303 ESVESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIECDSSFTA-DILVS 361

Query: 224 SLISPCS 230
           SL+  C 
Sbjct: 362 SLVLGCK 368


>AT1G33530.1 | Symbols:  | F-box family protein |
           chr1:12159884-12161314 FORWARD LENGTH=441
          Length = 441

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 24/163 (14%)

Query: 12  RSLENPRREGSYTIYGFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVYTLGSDSWRQI 71
           R+L  PR  G+    GFG D  + +YKV+ ++ ++        +    V+ L ++ WRQ 
Sbjct: 215 RTLTPPR--GTKLSVGFGIDVVTGTYKVMVLYGFD--------RVGTVVFDLDTNKWRQR 264

Query: 72  QDFPSGVPF------DETGRFVSGSLNWLASVDSSWVIVSLDLGKECYQELSLP-DCGDA 124
                 +P       +    FV+GSL WL + D S ++V +DL  E ++ LS P D  D 
Sbjct: 265 YKTAGPMPLSCIPTPERNPVFVNGSLFWLLASDFSEILV-MDLHTEKFRTLSQPNDMDDV 323

Query: 125 ALTLG-----VLRDCLCIVTHHYEF-SDVWLMKEYGNKESWTK 161
            ++ G      L D LC+        S VW++ +    E W +
Sbjct: 324 DVSSGYIYMWSLEDRLCVSNVRQGLHSYVWVLVQDELSEKWER 366


>AT2G30380.1 | Symbols:  | Plant protein of unknown function
           (DUF641) | chr2:12948284-12950573 FORWARD LENGTH=519
          Length = 519

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 19/145 (13%)

Query: 23  YTIYGFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVYTLGSDSWRQIQD-FPSGVPFD 81
           Y   GFG D  + +YK+V +F Y+ +        Q ++  L    WR + +  P  V  +
Sbjct: 369 YWAMGFGKDKVNGTYKIVRMF-YDTN--------QFEILDLTIGEWRTMPNPLPYYVQPN 419

Query: 82  ETGRFVSGSLNWLASVDSSWVIVSLDLGKECYQELSLPDCGDAALTLGVLRDCLCIV--- 138
               FV+GS+ W   V + + I++LDL  E ++++  P        L  L D L ++   
Sbjct: 420 HHSAFVNGSIYWYDLV-TGYKILALDLHTEQFRDVPRPHGSPTLAPLANLEDRLAMICDY 478

Query: 139 --THHYEFSDVWLMKEYGNKESWTK 161
             +HH++ + +W M     +E+WTK
Sbjct: 479 EPSHHWKVA-IWTMD--TQEETWTK 500


>AT4G17780.1 | Symbols:  | F-box and associated interaction
           domains-containing protein | chr4:9880259-9881455
           REVERSE LENGTH=398
          Length = 398

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 27  GFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVYTLGSDS--WRQIQDFPSGVPFDETG 84
           GFG D  + SYKVV + C    S       +V+   L  ++  WR +   P  V      
Sbjct: 150 GFGKDKVTGSYKVVKM-CLISFSEICARDPEVEYSVLDVETGEWRMLSPPPYKVFEVRKS 208

Query: 85  RFVSGSLNWL-ASVDSSWVIVSLDLGKECYQELSLPDCGDAALTLGV--LRDCLCIVTHH 141
              +GS+ WL    + +W I++LDL KE    +S+PD      T  +  L D L I   +
Sbjct: 209 ECANGSIYWLHKPTERAWTILALDLHKEELHNISVPDMSVTQETFQIVNLEDRLAIANTY 268

Query: 142 YEFS---DVWLMKEYGNKESWTKIFSV 165
            +     ++W M      E+WTK +S+
Sbjct: 269 TKTEWKLEIWSMD--TEVETWTKTYSI 293


>AT3G20620.1 | Symbols:  | F-box family protein-related |
           chr3:7198708-7199969 REVERSE LENGTH=391
          Length = 391

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 57  QVKVYTLGSDSWRQIQDFP------SGVPFDETGR-FVSGSLNWLASVDSSWVIVSLDL- 108
           + +VY+  + SW+ I   P      S  P+  TG  FV G + WL S+D+   I+S+DL 
Sbjct: 199 ECEVYSSSTGSWKNIGTVPCLPMSCSLRPYRRTGHIFVGGKVYWLVSLDAPGKILSVDLE 258

Query: 109 GKECYQELSLPDCGDA---------ALTLGVLRDCLCIVTHHYEFSDVWLMKEYGNKESW 159
           GK  ++ ++LP   D          A  L  L+  L ++  H E  DVW+ K  G + SW
Sbjct: 259 GK--FEVINLPAYADGLREDEQITEASHLINLKGSLGLLVLHPENMDVWVWKHDGERYSW 316

Query: 160 T 160
            
Sbjct: 317 V 317


>AT3G22650.1 | Symbols: ATSFL61, SFL61, CEG | F-box and associated
           interaction domains-containing protein |
           chr3:8014809-8015960 FORWARD LENGTH=372
          Length = 372

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)

Query: 21  GSYTIYGFGYDHF-SDSYKVVAVFCYECDSGS---GGYKTQVKVYTLGSDSWRQIQDFPS 76
            S   YGFGYD+   D YK++ +F  E +  S   G Y+ ++++Y   SDSWR +     
Sbjct: 135 SSNDFYGFGYDNVCRDEYKLLRIFDGEIEDESEIAGSYEPKIQIYDFKSDSWRIV----- 189

Query: 77  GVPFDETGRFVSGSLNWLASVDS--SWVIVSLDLGKECYQEL-SLP-DCG--DAALTLGV 130
               D+T   V G++ W+A  ++     I S D   E ++ + +LP +C   D A    +
Sbjct: 190 ----DDTRVSVKGNMYWIAHWNNRPEIFIQSFDFSTETFKIVCNLPFECNVLDTAALSSL 245

Query: 131 LRDCLCIVTHHYEFS--DVWLMKEYGNK-ESWTKIFSVPSMGEQSPYTKTLHISE 182
             D L ++    E    +VW+  +  ++  SWTK   V      SP   TLH  +
Sbjct: 246 RGDRLSLLHQSGETMKIEVWITNKLSDEVVSWTKYVDV-----TSPDLPTLHTDQ 295


>AT1G32600.1 | Symbols:  | F-box associated ubiquitination effector
           family protein | chr1:11794802-11795683 FORWARD
           LENGTH=293
          Length = 293

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 10  KLRSLENPRREGSYTIYGFGYDHFSDSYKVVAVFCYECDSGSGGYKTQVKVYTLGSDSWR 69
           K + +   +R  +  + GFGYD   D YK+V +              +  ++T    SWR
Sbjct: 71  KFKRVPMIKRGQTQNLLGFGYDRVLDDYKIVTII-----------DKKTYIFTFKESSWR 119

Query: 70  QIQDFPSGVPF--DETGRFVSGSLNWLAS-VDSSWVIVSLDLGKECYQELSLPDCGDAAL 126
           + +  PS   F  + TG  V   + W+A+  +    I+  D   E Y +L++P       
Sbjct: 120 ESKLIPSSDCFFKERTGTVVDNCMYWIANRFNKEKFILCFDFVNEEYSKLNVPMMLSGLE 179

Query: 127 T---LGVLRDCLCIVTHHYEFSD 146
               L V R  LC++ H+    D
Sbjct: 180 FNSWLDVSRGELCVINHYPSVDD 202