Miyakogusa Predicted Gene
- Lj1g3v2326690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2326690.1 Non Chatacterized Hit- tr|I1K838|I1K838_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37519
PE,27.63,3e-18,seg,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; zf-C3HC4_3,NULL; UNCHARACTERIZED RING
ZINC,CUFF.28901.1
(455 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 299 2e-81
AT2G38185.2 | Symbols: | RING/U-box superfamily protein | chr2:... 283 2e-76
AT2G38185.1 | Symbols: | RING/U-box superfamily protein | chr2:... 283 2e-76
AT2G38185.4 | Symbols: | RING/U-box superfamily protein | chr2:... 281 5e-76
AT2G38220.1 | Symbols: | RING/U-box superfamily protein | chr2:... 256 3e-68
AT2G38195.1 | Symbols: | RING/U-box superfamily protein | chr2:... 246 2e-65
AT2G38185.3 | Symbols: | RING/U-box superfamily protein | chr2:... 201 1e-51
AT2G38195.2 | Symbols: | RING/U-box superfamily protein | chr2:... 193 2e-49
AT4G24204.3 | Symbols: | RING/U-box superfamily protein | chr4:... 71 1e-12
AT4G24204.1 | Symbols: | RING/U-box superfamily protein | chr4:... 68 1e-11
AT4G24204.2 | Symbols: | RING/U-box superfamily protein | chr4:... 66 6e-11
AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis th... 62 1e-09
AT3G23280.2 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis th... 59 6e-09
AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis th... 59 7e-09
AT3G53410.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 5e-07
AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family ... 50 3e-06
>AT5G01450.1 | Symbols: | RING/U-box superfamily protein |
chr5:183693-186244 REVERSE LENGTH=444
Length = 444
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 224/392 (57%), Gaps = 17/392 (4%)
Query: 66 DDRWSCFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLDAK- 124
+D WSC V+ +F FVS+TLILG+YG+ V LGP SS +P+ VFVQ V VE L K
Sbjct: 68 EDPWSCVVVVATFCIFVSMTLILGLYGTTNVWLGPNSSFLIKPTSVFVQNVIVEELGNKG 127
Query: 125 PGPILYGTYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIF 184
G ILYG Q P LDV+T W E +++P+ S+K W YLN+GS+V +SY + SS++
Sbjct: 128 SGLILYGLNQAPQLDVLTKWSEVHYLAVPNDSYKYWIQYLNKGSRVKVSYNVESVGSSLY 187
Query: 185 LIIADGTEGLSVWLENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAX-XXXXXXXXXX 243
L+IA G +GLS W+++PT P+TTLSW+II +G I Q+I S+SYYVA
Sbjct: 188 LVIAQGVDGLSEWVQDPTRPDTTLSWHIISDSGYIEQDITKSSSYYVAVGNVYLNEVKAT 247
Query: 244 XXXSVRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAAVLVSPAPQQNTSNNEWYVKLSY 303
V +++TTNAYY C+ + C+L++ NAAVL SP P+ N S NE+ KLSY
Sbjct: 248 IDIQVEGVLYDTTNAYYNCSFPNDKCTLSVPLFGTNAAVLTSPGPKLNNSKNEFCAKLSY 307
Query: 304 GPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEGNGPQREPLLSRKXXXXXX 363
PRW+ Y + NK ED + PL+ K
Sbjct: 308 EPRWIAYIVCMGVVTALLLIVSSLFNKRQPVTEDE----TVDENDDVAPLIPGKDDDNSS 363
Query: 364 XXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHCA 423
E+L+ GE ++TR LCAIC+DAPRDCFFL CGHC
Sbjct: 364 WCSSYSSILTSTEELEG-----------AHGEGHSSTRYLCAICYDAPRDCFFLSCGHCV 412
Query: 424 ACFPCGTRIAEASGTCPVCRRNMKKVRKIFTV 455
ACF CGTRIAE SG CPVCR+ ++KV+KIF V
Sbjct: 413 ACFQCGTRIAETSGFCPVCRKKIRKVKKIFNV 444
>AT2G38185.2 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=441
Length = 441
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 216/393 (54%), Gaps = 23/393 (5%)
Query: 71 CFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLD-AKPGPIL 129
CF++ WFF S LI +YG V LGP SSI +PS +FV+ +KV+ LD ++PG L
Sbjct: 64 CFSLALLIWFFASFILIENLYGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPGLQL 123
Query: 130 YGTYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLIIAD 189
YG Y+ P LD W E+R +S+ S+K W YYLN GS +NI+Y + P+ S++ L++ +
Sbjct: 124 YGFYRTPALDCFVNWSESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDE 183
Query: 190 GTEGL-SVWLENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXXXXXXXXXXXXX-XS 247
G +G+ L +P + SWN+I+G+GMI EI S+SYY+A
Sbjct: 184 GHQGVPQSVLNDPAYRYNVWSWNLIEGSGMIQLEIRKSSSYYLAVANLKSKDVEVELNID 243
Query: 248 VRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAAVLVSPAPQQNTS-NNEWYVKLSYGPR 306
V+A +++T ++Y C ++ C+ N GN+ V+ SPA Q S +EWY++ SY PR
Sbjct: 244 VKAVLYDTKQSFYNCNFSNGECTFNAMSLVGNSVVVTSPAASQGVSIEDEWYIRFSYQPR 303
Query: 307 WMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEG----NGPQREPLLSRKXXXXX 362
+ Y + N+ C+ G EG + R LL+ K
Sbjct: 304 EIAYVIGTGVVICFMLVAIQFCNRFQCS-------GGEGHLTEDDSARTRLLADKDDDGS 356
Query: 363 XXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHC 422
+ DL+ +G DGE SN +RRLCAICFD PRDCFFLPCGH
Sbjct: 357 SMGSCDDSYANDDADLEEFMGN--------DGEASNRSRRLCAICFDVPRDCFFLPCGHS 408
Query: 423 AACFPCGTRIAEASGTCPVCRRNMKKVRKIFTV 455
+C+ CGT + EA G+CP+CRR MKKV++I+TV
Sbjct: 409 VSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 441
>AT2G38185.1 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=441
Length = 441
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 216/393 (54%), Gaps = 23/393 (5%)
Query: 71 CFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLD-AKPGPIL 129
CF++ WFF S LI +YG V LGP SSI +PS +FV+ +KV+ LD ++PG L
Sbjct: 64 CFSLALLIWFFASFILIENLYGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPGLQL 123
Query: 130 YGTYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLIIAD 189
YG Y+ P LD W E+R +S+ S+K W YYLN GS +NI+Y + P+ S++ L++ +
Sbjct: 124 YGFYRTPALDCFVNWSESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDE 183
Query: 190 GTEGL-SVWLENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXXXXXXXXXXXXX-XS 247
G +G+ L +P + SWN+I+G+GMI EI S+SYY+A
Sbjct: 184 GHQGVPQSVLNDPAYRYNVWSWNLIEGSGMIQLEIRKSSSYYLAVANLKSKDVEVELNID 243
Query: 248 VRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAAVLVSPAPQQNTS-NNEWYVKLSYGPR 306
V+A +++T ++Y C ++ C+ N GN+ V+ SPA Q S +EWY++ SY PR
Sbjct: 244 VKAVLYDTKQSFYNCNFSNGECTFNAMSLVGNSVVVTSPAASQGVSIEDEWYIRFSYQPR 303
Query: 307 WMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEG----NGPQREPLLSRKXXXXX 362
+ Y + N+ C+ G EG + R LL+ K
Sbjct: 304 EIAYVIGTGVVICFMLVAIQFCNRFQCS-------GGEGHLTEDDSARTRLLADKDDDGS 356
Query: 363 XXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHC 422
+ DL+ +G DGE SN +RRLCAICFD PRDCFFLPCGH
Sbjct: 357 SMGSCDDSYANDDADLEEFMGN--------DGEASNRSRRLCAICFDVPRDCFFLPCGHS 408
Query: 423 AACFPCGTRIAEASGTCPVCRRNMKKVRKIFTV 455
+C+ CGT + EA G+CP+CRR MKKV++I+TV
Sbjct: 409 VSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 441
>AT2G38185.4 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=447
Length = 447
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 216/399 (54%), Gaps = 29/399 (7%)
Query: 71 CFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLD-AKPGPIL 129
CF++ WFF S LI +YG V LGP SSI +PS +FV+ +KV+ LD ++PG L
Sbjct: 64 CFSLALLIWFFASFILIENLYGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPGLQL 123
Query: 130 YGTYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLIIAD 189
YG Y+ P LD W E+R +S+ S+K W YYLN GS +NI+Y + P+ S++ L++ +
Sbjct: 124 YGFYRTPALDCFVNWSESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDE 183
Query: 190 GTEGL-SVWLENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXXXXXXXXXXXXXXS- 247
G +G+ L +P + SWN+I+G+GMI EI S+SYY+A
Sbjct: 184 GHQGVPQSVLNDPAYRYNVWSWNLIEGSGMIQLEIRKSSSYYLAVANLKSKDVEVTTTDQ 243
Query: 248 ------VRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAAVLVSPAPQQNTS-NNEWYVK 300
V+A +++T ++Y C ++ C+ N GN+ V+ SPA Q S +EWY++
Sbjct: 244 VELNIDVKAVLYDTKQSFYNCNFSNGECTFNAMSLVGNSVVVTSPAASQGVSIEDEWYIR 303
Query: 301 LSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEG----NGPQREPLLSR 356
SY PR + Y + N+ C+ G EG + R LL+
Sbjct: 304 FSYQPREIAYVIGTGVVICFMLVAIQFCNRFQCS-------GGEGHLTEDDSARTRLLAD 356
Query: 357 KXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFF 416
K + DL+ +G DGE SN +RRLCAICFD PRDCFF
Sbjct: 357 KDDDGSSMGSCDDSYANDDADLEEFMGN--------DGEASNRSRRLCAICFDVPRDCFF 408
Query: 417 LPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFTV 455
LPCGH +C+ CGT + EA G+CP+CRR MKKV++I+TV
Sbjct: 409 LPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 447
>AT2G38220.1 | Symbols: | RING/U-box superfamily protein |
chr2:16008112-16010538 FORWARD LENGTH=404
Length = 404
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 210/398 (52%), Gaps = 47/398 (11%)
Query: 70 SCFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLD-AKPGPI 128
SCF +I WFF SV LI GVYGS V LGP SSI +PS +FV+ +KV+ LD +KPG
Sbjct: 40 SCFGIIMGLWFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSIKVKELDFSKPGLQ 99
Query: 129 LYG-TYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLII 187
LYG Q P W E+R +S+ S+K W YYLNRG+ +NISY ++P+ S++ L+I
Sbjct: 100 LYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNILPKGSAVRLVI 159
Query: 188 ADGTEGLSV------WLENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXX-XXXXXX 240
+G++ + + L++ +T SWN+IQG+GMI +I S YY+
Sbjct: 160 TEGSQVIGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDI 219
Query: 241 XXXXXXSVRAFVHNTTNAYYKCALTSSPCS--LNIFFPNGNAAVLVSPAPQQNTS-NNEW 297
V+A +++T Y C+ ++ CS +N +P N AV+ SPA Q S ++EW
Sbjct: 220 EVELDIDVKAVLYDTKQTSYNCSFSNGECSFKMNERYPVENYAVVTSPALGQGVSIDDEW 279
Query: 298 YVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVG-SEGNGPQREPLLSR 356
Y++LSY PR + Y ++ NKL C G G G+ R LL+
Sbjct: 280 YIELSYQPRLIAYGSFTGVLLSFMLVAIHFCNKLKCC----GGEGFLSGDDSVRTCLLAD 335
Query: 357 KXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFF 416
K D D E SN + LCAICFDAPRDC F
Sbjct: 336 KG----------------------------DNDCCNDVEASN--KSLCAICFDAPRDCCF 365
Query: 417 LPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFT 454
LPCGHC +C+ CGT+I G CP+CR+ M V++I+T
Sbjct: 366 LPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIYT 403
>AT2G38195.1 | Symbols: | RING/U-box superfamily protein |
chr2:16003836-16006261 FORWARD LENGTH=399
Length = 399
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 207/395 (52%), Gaps = 46/395 (11%)
Query: 70 SCFAVIFSFWFFVSVTLILGVYGSMIVVLGPESSIAFQPSPVFVQYVKVENLD-AKPGPI 128
SCF +I WFF SV LI GVYGS V LGP SSI +PS +FV+ + + LD +KPG
Sbjct: 40 SCFGIIMGLWFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSINAKELDFSKPGLQ 99
Query: 129 LYG-TYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESSSIFLII 187
LYG Q P W E+R +S+ S+K W YYLNRG+ +NISY ++P+ S++ L+I
Sbjct: 100 LYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNILPKGSAVRLVI 159
Query: 188 ADGTEGLSVW----LENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXXXXX-XXXXX 242
TEG+ + L++ +T SWN+IQG+GMI +I S YY+
Sbjct: 160 ---TEGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDVEV 216
Query: 243 XXXXSVRAFVHNTTNAYYKCALTSSPCS--LNIFFPNGNAAVLVSPAPQQNTS-NNEWYV 299
V+ +++T + Y C+ ++ CS +N P N AV+ SPA Q S ++EWY+
Sbjct: 217 ELDIDVKVVLYDTKQSSYNCSFSNGECSFKMNERSPVENYAVVTSPALGQGVSIDDEWYI 276
Query: 300 KLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEGNGPQREPLLSRKXX 359
+LSY PR + Y ++ NKL C + G SE + R LL+ K
Sbjct: 277 ELSYQPRLIAYGSFTGVLLSFMLVAIHFCNKLKCCGGE--GFLSEDDS-VRTCLLADKG- 332
Query: 360 XXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPC 419
D D E SN + LCAICFDAPRDC FLPC
Sbjct: 333 ---------------------------DNDCCNDVEASN--KSLCAICFDAPRDCCFLPC 363
Query: 420 GHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFT 454
GHC +C+ CGT+I G CP+CR+ + V++I+T
Sbjct: 364 GHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYT 398
>AT2G38185.3 | Symbols: | RING/U-box superfamily protein |
chr2:16000516-16002699 FORWARD LENGTH=346
Length = 346
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 22/299 (7%)
Query: 164 LNRGSQVNISYRLIPESSSIFLIIADGTEGL-SVWLENPTHPNTTLSWNIIQGTGMITQE 222
L GS +NI+Y + P+ S++ L++ +G +G+ L +P + SWN+I+G+GMI E
Sbjct: 63 LTSGSLLNITYTVKPQGSAVQLVVDEGHQGVPQSVLNDPAYRYNVWSWNLIEGSGMIQLE 122
Query: 223 IFSSTSYYVAXXXXXXXXXXXXX-XSVRAFVHNTTNAYYKCALTSSPCSLNIFFPNGNAA 281
I S+SYY+A V+A +++T ++Y C ++ C+ N GN+
Sbjct: 123 IRKSSSYYLAVANLKSKDVEVELNIDVKAVLYDTKQSFYNCNFSNGECTFNAMSLVGNSV 182
Query: 282 VLVSPAPQQNTS-NNEWYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAG 340
V+ SPA Q S +EWY++ SY PR + Y + N+ C+
Sbjct: 183 VVTSPAASQGVSIEDEWYIRFSYQPREIAYVIGTGVVICFMLVAIQFCNRFQCS------ 236
Query: 341 VGSEG----NGPQREPLLSRKXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGET 396
G EG + R LL+ K + DL+ +G DGE
Sbjct: 237 -GGEGHLTEDDSARTRLLADKDDDGSSMGSCDDSYANDDADLEEFMGN--------DGEA 287
Query: 397 SNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFTV 455
SN +RRLCAICFD PRDCFFLPCGH +C+ CGT + EA G+CP+CRR MKKV++I+TV
Sbjct: 288 SNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 346
>AT2G38195.2 | Symbols: | RING/U-box superfamily protein |
chr2:16002654-16006261 FORWARD LENGTH=326
Length = 326
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 172/341 (50%), Gaps = 45/341 (13%)
Query: 123 AKPGPILYG-TYQYPPLDVVTTWGETRNVSLPSGSHKEWRYYLNRGSQVNISYRLIPESS 181
+KPG LYG Q P W E+R +S+ S+K W YYLNRG+ +NISY ++P+ S
Sbjct: 21 SKPGLQLYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNILPKGS 80
Query: 182 SIFLIIADGTEGLSVW----LENPTHPNTTLSWNIIQGTGMITQEIFSSTSYYVAXX-XX 236
++ L+I TEG+ + L++ +T SWN+IQG+GMI +I S YY+
Sbjct: 81 AVRLVI---TEGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLK 137
Query: 237 XXXXXXXXXXSVRAFVHNTTNAYYKCALTSSPCS--LNIFFPNGNAAVLVSPAPQQNTS- 293
V+ +++T + Y C+ ++ CS +N P N AV+ SPA Q S
Sbjct: 138 RKDVEVELDIDVKVVLYDTKQSSYNCSFSNGECSFKMNERSPVENYAVVTSPALGQGVSI 197
Query: 294 NNEWYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEGNGPQREPL 353
++EWY++LSY PR + Y ++ NKL C + G SE + R L
Sbjct: 198 DDEWYIELSYQPRLIAYGSFTGVLLSFMLVAIHFCNKLKCCGGE--GFLSEDDSV-RTCL 254
Query: 354 LSRKXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRD 413
L+ K D D E SN + LCAICFDAPRD
Sbjct: 255 LADKG----------------------------DNDCCNDVEASN--KSLCAICFDAPRD 284
Query: 414 CFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFT 454
C FLPCGHC +C+ CGT+I G CP+CR+ + V++I+T
Sbjct: 285 CCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYT 325
>AT4G24204.3 | Symbols: | RING/U-box superfamily protein |
chr4:12562069-12562815 REVERSE LENGTH=178
Length = 178
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 271 LNIFFPNGNAAVLVSPAPQQNTSNNEWYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNK 330
L +FF N+ L P N WY+ LS+ R + Y +L++
Sbjct: 13 LYMFFRKLNSIKL----PSDNDEFVRWYLGLSFSARVVIYITVLGTIMTITYLVLKFLSE 68
Query: 331 LHCAHEDRAGVGSEGNGPQREPLLSRKXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKL 390
C ED QR PL++ + E L+ G V+
Sbjct: 69 --CDMED---------DTQRLPLVAEEEVTTDWTPPLI------NESLEVTGKGDVETAS 111
Query: 391 LVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRI-AEASGTCPVCRRNMKKV 449
+ + + LC ICF+ R+CFF+PCGH A C C RI +E S CP+CRR ++K
Sbjct: 112 FSSSDDVDYST-LCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICRRVIRKS 170
Query: 450 RKI 452
+++
Sbjct: 171 KRL 173
>AT4G24204.1 | Symbols: | RING/U-box superfamily protein |
chr4:12562069-12562440 REVERSE LENGTH=123
Length = 123
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 403 LCAICFDAPRDCFFLPCGHCAACFPCGTRI-AEASGTCPVCRRNMKKVRKI 452
LC ICF+ R+CFF+PCGH A C C RI +E S CP+CRR ++K +++
Sbjct: 68 LCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPICRRVIRKSKRL 118
>AT4G24204.2 | Symbols: | RING/U-box superfamily protein |
chr4:12562069-12562646 REVERSE LENGTH=157
Length = 157
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 297 WYVKLSYGPRWMTYXXXXXXXXXXXXXXXNYLNKLHCAHEDRAGVGSEGNGPQREPLLSR 356
WY+ LS+ R + Y +L++ C ED QR PL++
Sbjct: 14 WYLGLSFSARVVIYITVLGTIMTITYLVLKFLSE--CDMED---------DTQRLPLVAE 62
Query: 357 KXXXXXXXXXXXXXXXXXEEDLDFHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFF 416
+ E L+ G V+ + + + LC ICF+ R+CFF
Sbjct: 63 EEVTTDWTPPLI------NESLEVTGKGDVETASFSSSDDVDYST-LCVICFEERRNCFF 115
Query: 417 LPCGHCAACFPCGTRI-AEASGTCPVCRRNMKKVRKI 452
+PCGH A C C RI +E S CP+CRR ++K +++
Sbjct: 116 VPCGHSATCRGCAQRILSEESKVCPICRRVIRKSKRL 152
>AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis
thaliana | chr4:8271660-8273685 REVERSE LENGTH=376
Length = 376
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 395 ETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKIFT 454
+T+N LC IC DAP + +PCGH A C C I CPVCR N+ +V K++
Sbjct: 316 KTANKEDGLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYH 375
Query: 455 V 455
V
Sbjct: 376 V 376
>AT3G23280.2 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis
thaliana | chr3:8321588-8324109 FORWARD LENGTH=438
Length = 438
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 384 GSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCR 443
S +G+ DG T CAIC DAP + +PCGH A C C I + CPVCR
Sbjct: 372 ASTEGERKEDGNTGT-----CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCR 426
Query: 444 RNMKKVRKIFTV 455
+ +V K++ V
Sbjct: 427 AKIDQVIKLYRV 438
>AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis
thaliana | chr3:8321588-8324109 FORWARD LENGTH=462
Length = 462
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 384 GSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCR 443
S +G+ DG T CAIC DAP + +PCGH A C C I + CPVCR
Sbjct: 396 ASTEGERKEDGNTGT-----CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCR 450
Query: 444 RNMKKVRKIFTV 455
+ +V K++ V
Sbjct: 451 AKIDQVIKLYRV 462
>AT3G53410.1 | Symbols: | RING/U-box superfamily protein |
chr3:19801175-19802274 REVERSE LENGTH=299
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 380 FHIGGSVDGKLLVDGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTC 439
+ IG +VD +GE +N + C IC PRD LPC H C C + + C
Sbjct: 223 YGIGNTVDD----NGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLC 278
Query: 440 PVCRRNMKKVRKI 452
P+CR+ + ++ +I
Sbjct: 279 PICRQPVDRLLEI 291
>AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family
protein | chr1:21881741-21883632 FORWARD LENGTH=338
Length = 338
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 393 DGETSNNTRRLCAICFDAPRDCFFLPCGHCAACFPCGTRIAEASGTCPVCRRNMKKVRKI 452
DG+T + LC +C D + F+ CGH C PC ++ TCP+CR +++V KI
Sbjct: 284 DGDTPD----LCVVCLDQKYNTAFVECGHMCCCTPCSLQLR----TCPLCRERIQQVLKI 335
Query: 453 F 453
+
Sbjct: 336 Y 336