Miyakogusa Predicted Gene
- Lj1g3v2315340.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2315340.2 Non Chatacterized Hit- tr|I3SVG3|I3SVG3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.11,0,sigpep_I_bact: signal peptidase I,Peptidase S26A, signal
peptidase I; LEADERPTASE,Peptidase S26A, si,CUFF.28916.2
(173 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08980.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 198 1e-51
AT1G53530.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 86 1e-17
AT1G29960.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 83 8e-17
AT1G53530.2 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 78 2e-15
AT1G23465.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 74 3e-14
AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase... 61 3e-10
AT1G06870.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 58 3e-09
AT2G30440.1 | Symbols: TPP | thylakoid processing peptide | chr2... 55 3e-08
AT1G06200.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 51 3e-07
AT2G31140.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family pr... 50 5e-07
>AT3G08980.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr3:2741279-2742375 FORWARD LENGTH=154
Length = 154
Score = 198 bits (504), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 117/158 (74%), Gaps = 6/158 (3%)
Query: 1 MGPSGFLWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGGVSDDYVF 60
MG LW KK T +I +T+SDR +VVPVRG SMSPTFNP+ +S + DDYV
Sbjct: 1 MGIQNILWQVAKKSFTGSIIGLTISDRCCSVVPVRGDSMSPTFNPQRNSYL----DDYVL 56
Query: 61 VEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPGEWIGAHHNYDVLKIPEGHCWVE 120
V+KFCL+ YKF+ GDVVVF SP + + +IKRI+ +PGEWI + DV+++PEGHCWVE
Sbjct: 57 VDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGEWISSSR--DVIRVPEGHCWVE 114
Query: 121 GDNAASSLDSKSFGPIPLALIRGRVTHVVWPPQRIGAV 158
GDN SSLDS+SFGPIPL LI+GRVT V+WPPQRI +
Sbjct: 115 GDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKI 152
>AT1G53530.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:19978249-19979778 FORWARD LENGTH=168
Length = 168
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 16/148 (10%)
Query: 19 LISVTVSDRYM-TVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVV 77
L + V+DRY+ + V G SM PT N ++ D + E + K GDVV
Sbjct: 30 LCLLHVTDRYIISTTHVHGPSMLPTLN---------LTGDVILAEHLSHRFGKIGLGDVV 80
Query: 78 VFRSPLNHKETHIKRIIALPGEWIGAHHNYDV------LKIPEGHCWVEGDNAASSLDSK 131
+ RSP + K KRI+ L G+ + + V + +P+GH W++GDN +S DS+
Sbjct: 81 LVRSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSR 140
Query: 132 SFGPIPLALIRGRVTHVVWPPQRIGAVK 159
FGP+P +LI G+ VWPP+ G+++
Sbjct: 141 HFGPVPYSLIEGKALLRVWPPEYFGSLR 168
>AT1G29960.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:10494813-10495851 FORWARD LENGTH=169
Length = 169
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 36 GGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIA 95
G SM+PT +P S + + E+ + K S GD+VV RSP N +T IKR+I
Sbjct: 45 GPSMTPTLHP---------SGNVLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVIG 95
Query: 96 LPGEWIG------AHHNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVV 149
+ G+ I + +P+GH +V+GD +S DS++FG +P LI+GRV V
Sbjct: 96 IEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRV 155
Query: 150 WPPQRIGAVKSTP 162
WP Q G + TP
Sbjct: 156 WPFQDFGPLGPTP 168
>AT1G53530.2 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:19978488-19979778 FORWARD LENGTH=118
Length = 118
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 39 MSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPG 98
M PT N ++ D + E + K GDVV+ RSP + K KRI+ L G
Sbjct: 1 MLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEG 51
Query: 99 EWIGAHHNYDV------LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVVWPP 152
+ + + V + +P+GH W++GDN +S DS+ FGP+P +LI G+ VWPP
Sbjct: 52 DRLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLRVWPP 111
Query: 153 QRIGAVK 159
+ G+++
Sbjct: 112 EYFGSLR 118
>AT1G23465.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:8330055-8330938 FORWARD LENGTH=155
Length = 155
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 23/157 (14%)
Query: 3 PSGFLWNFTKK-------FVTFGLISVTVSDRYMTVVP-VRGGSMSPTFNPKTHSLMGGV 54
PS WN + FV + V+ Y+ + G SM PT +P
Sbjct: 4 PSSSFWNTASREAMKSGMFVAKVYCFLHVTTNYLGFMAYAYGPSMIPTLHP--------- 54
Query: 55 SDDYVFVEKFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPGEWIG------AHHNYD 108
S + + E+ + K S GD+VV RSP N +T IKR++ + G+ I
Sbjct: 55 SGNMLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVVGVEGDCISFVIDPVKSDESQ 114
Query: 109 VLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRV 145
+ +P+GH +V+GD +S DS++FGP+P LI+GRV
Sbjct: 115 TIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRV 151
>AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase 1
| chr3:8970694-8972020 FORWARD LENGTH=291
Length = 291
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 40/170 (23%)
Query: 17 FGLISVTVSDRYMTVVP--VRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSHG 74
F I+V+++ RY P + SM PTF+ D + EK K
Sbjct: 119 FVAIAVSLAFRYFIAEPRYIPSLSMYPTFD----------VGDRLVAEKVSYYFRKPCAN 168
Query: 75 DVVVFRSP-------LNHKETHIKRIIALPGEWIGAHHN-------------------YD 108
D+V+F+SP + IKRI+A G+ + H+ Y+
Sbjct: 169 DIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYE 228
Query: 109 V--LKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVVWPPQRIG 156
+ +++PE +V GDN +S DS +GP+PL I GR WPP R+
Sbjct: 229 MTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVS 278
>AT1G06870.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:2108832-2110642 FORWARD LENGTH=367
Length = 367
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 34/180 (18%)
Query: 7 LWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCL 66
L N + +VTVS + R P P T L D V EK
Sbjct: 179 LLNICSEDAKAAFTAVTVSLLF------RSALAEPKSIPSTSMLPTLDVGDRVIAEKVSY 232
Query: 67 QKYKFSHGDVVVFRSP-------LNHKETHIKRIIALPGEWIGA---------------- 103
K D+V+F++P + + IKRI+A G+W+
Sbjct: 233 FFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDF 292
Query: 104 -----HHNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRVTHVVWPPQRIGAV 158
+ + + +PEG+ +V GDN S DS ++GP+P+ I GR WPP ++ +
Sbjct: 293 VLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDI 352
>AT2G30440.1 | Symbols: TPP | thylakoid processing peptide |
chr2:12973244-12975027 FORWARD LENGTH=340
Length = 340
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 31/130 (23%)
Query: 57 DYVFVEKFCLQKYKFSHGDVVVFRSP----------LNHKETHIKRIIALPGEWIGAH-- 104
D V EK K D+V+F++P + + IKRI+A G+W+
Sbjct: 193 DRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDG 252
Query: 105 -------------------HNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLALIRGRV 145
+ + + +P+G+ +V GDN S DS ++GP+P+ I GR
Sbjct: 253 KLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRS 312
Query: 146 THVVWPPQRI 155
WPP ++
Sbjct: 313 VFRYWPPSKV 322
>AT1G06200.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr1:1894604-1896852 REVERSE LENGTH=206
Length = 206
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 7 LWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGG----VSDDYVFVE 62
L+ K + +G IS SD+ G M+PT +L+ V Y+FV
Sbjct: 36 LFGVVMKNLFYGRISYLHSDK--------GKEMAPTMGTNESTLLVRKLPVVDTRYIFV- 86
Query: 63 KFCLQKYKFSHGDVVVFRSPLNHKETHIKRIIALPG-EWIGAHHNYDVLKIPEGHCWVEG 121
GD VV + P + ++R+ AL G E + + + + + CWV
Sbjct: 87 -----------GDAVVLKDPNETNKYIVRRLAALEGSEMVSSDEKDEPFVLEKDQCWVVA 135
Query: 122 DN----AASSLDSKSFGPIPLALIRGRVTHVV 149
+N + + DS++FGPI +A I GR + +
Sbjct: 136 ENQEMKSKEAYDSRTFGPISMADIVGRAIYCL 167
>AT2G31140.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family
protein | chr2:13270088-13271619 FORWARD LENGTH=205
Length = 205
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 35 RGGSMSPTFNPKTHSLMGGVSDDYVFVEKFCLQKYKFSH-GDVVVFRSPLNHKETHIKRI 93
+G MSPT ++L+ + K + +F GD VV + P + + ++R+
Sbjct: 56 KGPEMSPTMTANENTLL---------IRKIPIANTRFVFIGDAVVLKDPNDSDKYLVRRL 106
Query: 94 IALPG-EWIGAHHNYDVLKIPEGHCWVEGDN----AASSLDSKSFGPIPLALIRGRVTHV 148
A+ G E + + + + CWV +N A + DS++FGP+ A I GR +
Sbjct: 107 AAVEGFEMVSGDEKEEPFVLEKNQCWVTAENQELKAKEAYDSRTFGPVSTADIVGRAIYC 166
Query: 149 VWPPQRIGAVKST 161
+ G V+++
Sbjct: 167 LRTAVDHGPVRNS 179