Miyakogusa Predicted Gene
- Lj1g3v2313190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2313190.1 Non Chatacterized Hit- tr|G7KS93|G7KS93_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,87.33,0,DUF647,Protein of unknown function DUF647;
coiled-coil,NULL; GB DEF: HYPOTHETICAL PROTEIN
F7A7_30,NU,gene.g32949.t1.1
(365 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01510.1 | Symbols: RUS5 | Protein of unknown function, DUF64... 434 e-122
AT5G49820.1 | Symbols: EMB1879, RUS6 | Protein of unknown functi... 84 2e-16
AT1G13770.2 | Symbols: RUS3 | Protein of unknown function, DUF64... 84 2e-16
AT1G13770.1 | Symbols: RUS3 | Protein of unknown function, DUF64... 83 3e-16
AT3G45890.1 | Symbols: RUS1 | Protein of unknown function, DUF64... 81 1e-15
AT2G31190.2 | Symbols: RUS2 | Protein of unknown function, DUF64... 76 3e-14
AT2G31190.1 | Symbols: RUS2, WXR1 | Protein of unknown function,... 76 3e-14
AT2G23470.1 | Symbols: RUS4 | Protein of unknown function, DUF64... 65 7e-11
>AT5G01510.1 | Symbols: RUS5 | Protein of unknown function, DUF647 |
chr5:201702-205151 FORWARD LENGTH=509
Length = 509
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/368 (61%), Positives = 277/368 (75%), Gaps = 8/368 (2%)
Query: 1 MLLQFPTNVTGWICHTLVTSSLLRAVXXXXXX----XXXXXXXXXXXRWVSKDGIGAFGR 56
ML QFPTN+TGWIC+ LVTSSLL+AV RWVSKDGIGA GR
Sbjct: 136 MLWQFPTNITGWICNVLVTSSLLKAVGVGSFSGTSAAATAAASAAAIRWVSKDGIGALGR 195
Query: 57 LFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLASLGNLTKAVARGL 116
L IGGRFG+LFDDDPKQWRMYADFIGSAGS FDL TQ+YP+ FL LAS GNL KAVARGL
Sbjct: 196 LLIGGRFGSLFDDDPKQWRMYADFIGSAGSFFDLATQLYPSQFLLLASTGNLAKAVARGL 255
Query: 117 KDPSFRVIQNHFAISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXDTPGVVKSYQVLSLTW 176
+DPSFRVIQNHFAISGNLGE+AAKEEVWEV AQ DTPG+VKS+ + LTW
Sbjct: 256 RDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFGILIIDTPGLVKSFPFVLLTW 315
Query: 177 LSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLDCNREENILAWPQFL 236
S+RL+HLWLRY+SL+VLQFNT+NLKRARI+V+SHV+HS VPG +DCN+ ENIL W +F+
Sbjct: 316 TSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSVVPGYVDCNKRENILLWQRFM 375
Query: 237 KPKIIFGLPLEKMDGVGGSHFMVEALIKLYANEKYILMVNQQPEDLEFYVSFKVGASSVS 296
KP+IIFG+ LE++ G+ S V+AL+K+Y EKYIL +N+ +D EF VSFKV A+S
Sbjct: 376 KPRIIFGVSLEELSGLEKSVSKVKALLKMYTKEKYILTLNKLNKDTEFSVSFKVNATSRD 435
Query: 297 VLRSVWQAFWLSENWDS----KGNVCDQLANSLMELEDRFEDFIQKLKSAGWDTQQLKLK 352
VLR +WQA+WL EN + K +V L SL E++++F+DF+ KL +AGW+ ++ LK
Sbjct: 436 VLRCLWQAYWLEENMEESFKDKDSVFHWLKQSLSEMDNKFDDFLFKLDTAGWNLRESNLK 495
Query: 353 VPKEISID 360
VP ++ ID
Sbjct: 496 VPNQVLID 503
>AT5G49820.1 | Symbols: EMB1879, RUS6 | Protein of unknown function,
DUF647 | chr5:20246753-20249432 REVERSE LENGTH=497
Length = 497
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 22/307 (7%)
Query: 45 WVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLAS 104
W+ KDG G G++ R G FD D KQ R D + G+ +L T P FLPLA
Sbjct: 170 WILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLAC 228
Query: 105 LGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEE-VWEVVAQXXXXXXXXXXXDTP 163
N+ K VA + I FA N+G++ AK E V + P
Sbjct: 229 AANVVKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLMGTGFSILISKRNP 288
Query: 164 GVVKSYQVLSLTWLSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLDC 223
+V ++ +LS + L Y+ + + +T+N R + V+S + VP +
Sbjct: 289 SLVTTFGLLSCGY-------LMSSYQEVRSVVLHTLNRARFTVAVESFLKTGRVPSLQEG 341
Query: 224 NREENILAWPQFLKPKIIFGLPLEKMDGVGGSHFMVEALIKLYANEKYILMVNQQPEDLE 283
N +E I +P ++ G + ++ V+ + E+Y MV P +
Sbjct: 342 NIQEKIFTFPWVDDRPVMLGARFKDAFQDPSTYMAVKP---FFDKERY--MVTYSPTKGK 396
Query: 284 FYVSFKVGASSVSVLRSVWQA----FWLSENWDSKGNVCDQL----ANSLMELEDRFEDF 335
Y K A+S +L++ + A +++++ D +QL A + ELE R +
Sbjct: 397 VYALLKHQANSDDILKAAFHAHVLLHFMNQSKDGNPRSVEQLDPAFAPTEYELESRIAES 456
Query: 336 IQKLKSA 342
+ + ++
Sbjct: 457 CEMVSTS 463
>AT1G13770.2 | Symbols: RUS3 | Protein of unknown function, DUF647 |
chr1:4722243-4724345 FORWARD LENGTH=353
Length = 353
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 44/328 (13%)
Query: 44 RWVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLA 103
+W +D G G + G+ D + K WR+ AD + G + DL + ++P+ F+ +
Sbjct: 27 QWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVV 86
Query: 104 SLGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXD-T 162
LG+L+++ + + HFA+ N +I+AKE E +A T
Sbjct: 87 CLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFT 146
Query: 163 PGVVKSYQVLSLTWLSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLD 222
G + + L++LS+ + H++ Y ++ L N++N +R+ IL+ + V
Sbjct: 147 SG---NPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQ 203
Query: 223 CNREENILA-WPQFLKP--------KIIFG-----LP----LEKMDGVGGSHFMVEA--L 262
+ E +L W L+ ++ G LP L+ ++GVG S + L
Sbjct: 204 VSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLL 263
Query: 263 IKLYANEKYILMVNQQPED-LEFYVSFKVGASSVSVLRSVWQAFWLSENWDSKGNVCDQL 321
+ N IL + +P D L+ Y+ V A+ + S + E W
Sbjct: 264 AHIKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSE---GEAW---------- 310
Query: 322 ANSLMELEDRFEDFIQKLKSAGWDTQQL 349
++ +++ + KL+S GW T++L
Sbjct: 311 ------IDKHYDELLHKLRSGGWKTERL 332
>AT1G13770.1 | Symbols: RUS3 | Protein of unknown function, DUF647 |
chr1:4721717-4724345 FORWARD LENGTH=440
Length = 440
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 44/328 (13%)
Query: 44 RWVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLA 103
+W +D G G + G+ D + K WR+ AD + G + DL + ++P+ F+ +
Sbjct: 114 QWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVV 173
Query: 104 SLGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXD-T 162
LG+L+++ + + HFA+ N +I+AKE E +A T
Sbjct: 174 CLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFT 233
Query: 163 PGVVKSYQVLSLTWLSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLD 222
G + + L++LS+ + H++ Y ++ L N++N +R+ IL+ + V
Sbjct: 234 SG---NPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQ 290
Query: 223 CNREENILA-WPQFLKP--------KIIFG-----LP----LEKMDGVGGSHFMVEA--L 262
+ E +L W L+ ++ G LP L+ ++GVG S + L
Sbjct: 291 VSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLL 350
Query: 263 IKLYANEKYILMVNQQPED-LEFYVSFKVGASSVSVLRSVWQAFWLSENWDSKGNVCDQL 321
+ N IL + +P D L+ Y+ V A+ + S + E W
Sbjct: 351 AHIKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSE---GEAW---------- 397
Query: 322 ANSLMELEDRFEDFIQKLKSAGWDTQQL 349
++ +++ + KL+S GW T++L
Sbjct: 398 ------IDKHYDELLHKLRSGGWKTERL 419
>AT3G45890.1 | Symbols: RUS1 | Protein of unknown function, DUF647 |
chr3:16871697-16874100 FORWARD LENGTH=608
Length = 608
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 42/372 (11%)
Query: 9 VTGWICHTLVTSSLLRAVXXXXXXXXXXXXXXXXXRWVSKDGIGAFGRLFIGGRFGNLFD 68
+ I L T SLL AV WV KDGIG ++ + ++G FD
Sbjct: 223 IASQISGVLATQSLLYAVGLGKGAIPTAAAI----NWVLKDGIGYLSKIMLS-KYGRHFD 277
Query: 69 DDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLASLGNLTKAVARGLKDPSFRVIQNHF 128
PK WR++AD + +A ++ T V+P +F+ + + ++ A ++ + F
Sbjct: 278 VHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGF 337
Query: 129 AISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXDTPGVVKSYQVLSLTWLSMRLLHLWLRY 188
A N E+ AK E +V++ + G S + + ++ +H++
Sbjct: 338 ASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANCIGTSTSLALAAFGVVTT--IHMYTNL 395
Query: 189 ESLSVLQFNTINLKRARILVKSHVLHSTVPGCLDCNREENILAWPQFLKPKII-----FG 243
+S +Q T+N RA ++ +++ P + N EE + +F K F
Sbjct: 396 KSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVNDEEPLFPTVRFSNMKSPEKLQDFV 455
Query: 244 LPLE----------------KMDGVGGSHFMVEALIKLYANEKYILMVNQQPEDLEFYVS 287
L E K+ V + AL LY NE YIL ++ F V
Sbjct: 456 LSSEAKAAAADIEERLQLGSKLSDVIHNKEEAIALFDLYRNEGYILTEHKG----RFCVM 511
Query: 288 FKVGASSVSVLRSVWQA---FWLSENWD----SKGNVCD---QLANSLMELEDRFEDFIQ 337
K ++ +LRS++Q +WL +N S + C +L SL + FE +
Sbjct: 512 LKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAKE 571
Query: 338 KLKSAGWDTQQL 349
+S GW T+ L
Sbjct: 572 DSESVGWVTEGL 583
>AT2G31190.2 | Symbols: RUS2 | Protein of unknown function, DUF647 |
chr2:13291458-13293681 REVERSE LENGTH=432
Length = 432
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 45 WVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLAS 104
W+ KDG+ G+L I G D +PK+WR+ AD + G+ +L + + P FL +A
Sbjct: 126 WILKDGMQHVGKL-ICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAG 184
Query: 105 LGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXDTPG 164
LGN K +A + I + FA GNL +I AK E + T
Sbjct: 185 LGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLAST-- 242
Query: 165 VVKSYQVLSLTWLSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLDCN 224
+ S + + + ++H++ E + + NT+N +R ++V + + VP D
Sbjct: 243 ICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLR 302
Query: 225 REENILAWPQFLKP-----KIIFGLPLEKMDGVGGSHFMVEALIKLYANEKYILMVNQQP 279
+E+++ +P+ +P + G L K V S V+ L +++ EK++L +
Sbjct: 303 FQEDLM-FPE--RPIQDAGNVKVGRALHK--AVKPSE--VQRLKQVFVEEKFLLSHGKSW 355
Query: 280 EDLEFYVSFKVGASSVSVLRSVWQAFW---LSENWDSKGNVCDQLANSLMELEDRFEDFI 336
D+ + A+ LR A + +++ ++ ++ L ++ ++ D F F+
Sbjct: 356 TDM----VLEHDATGEDALRGWLVAAYVKSMTKIYNDPDDII--LQDAYDKMNDVFNPFL 409
Query: 337 QKLKSAGWDTQQL 349
++++ GW T +
Sbjct: 410 SQVQAKGWYTDRF 422
>AT2G31190.1 | Symbols: RUS2, WXR1 | Protein of unknown function,
DUF647 | chr2:13291458-13293681 REVERSE LENGTH=433
Length = 433
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 45 WVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLAS 104
W+ KDG+ G+L I G D +PK+WR+ AD + G+ +L + + P FL +A
Sbjct: 127 WILKDGMQHVGKL-ICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAG 185
Query: 105 LGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEEVWEVVAQXXXXXXXXXXXDTPG 164
LGN K +A + I + FA GNL +I AK E + T
Sbjct: 186 LGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLAST-- 243
Query: 165 VVKSYQVLSLTWLSMRLLHLWLRYESLSVLQFNTINLKRARILVKSHVLHSTVPGCLDCN 224
+ S + + + ++H++ E + + NT+N +R ++V + + VP D
Sbjct: 244 ICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLR 303
Query: 225 REENILAWPQFLKP-----KIIFGLPLEKMDGVGGSHFMVEALIKLYANEKYILMVNQQP 279
+E+++ +P+ +P + G L K V S V+ L +++ EK++L +
Sbjct: 304 FQEDLM-FPE--RPIQDAGNVKVGRALHK--AVKPSE--VQRLKQVFVEEKFLLSHGKSW 356
Query: 280 EDLEFYVSFKVGASSVSVLRSVWQAFW---LSENWDSKGNVCDQLANSLMELEDRFEDFI 336
D+ + A+ LR A + +++ ++ ++ L ++ ++ D F F+
Sbjct: 357 TDM----VLEHDATGEDALRGWLVAAYVKSMTKIYNDPDDII--LQDAYDKMNDVFNPFL 410
Query: 337 QKLKSAGWDTQQL 349
++++ GW T +
Sbjct: 411 SQVQAKGWYTDRF 423
>AT2G23470.1 | Symbols: RUS4 | Protein of unknown function, DUF647 |
chr2:9999105-10001398 REVERSE LENGTH=520
Length = 520
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 45 WVSKDGIGAFGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLTTQVYPAYFLPLAS 104
W+ KDG+G R + FD + K+ R + S +L T V+P YFL LAS
Sbjct: 177 WILKDGLGRLSRCIYTASLASAFDTNLKRVRFSTSVLFSLSIGVELMTPVFPQYFLLLAS 236
Query: 105 LGNLTKAVARGLKDPSFRVIQNHFAISGNLGEIAAKEEVWEVV 147
+ N+ K ++ + + FA++ NLGE++AK ++ V
Sbjct: 237 IANIAKQISLSCYLATGSAVHRSFAVADNLGEVSAKAQIQTVC 279