Miyakogusa Predicted Gene
- Lj1g3v2297580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2297580.1 tr|B9HCV6|B9HCV6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_761836 PE=4
SV=1,31.05,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_3,,CUFF.28862.1
(492 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 583 e-166
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 229 2e-60
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 5e-55
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 209 4e-54
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 206 2e-53
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 201 1e-51
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 7e-51
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 9e-50
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 1e-48
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 1e-47
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 187 2e-47
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 6e-45
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 2e-44
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 175 7e-44
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 169 3e-42
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 169 6e-42
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 7e-42
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 1e-41
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 160 1e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 9e-39
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 150 2e-36
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 149 5e-36
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 145 5e-35
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 143 3e-34
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 141 8e-34
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 9e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 135 5e-32
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 2e-31
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 125 5e-29
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 123 2e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 123 4e-28
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 120 2e-27
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 119 4e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 118 7e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 118 1e-26
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 118 1e-26
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 115 8e-26
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 113 3e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 4e-25
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 102 4e-22
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 98 1e-20
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 96 4e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 5e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-20
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 94 2e-19
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 94 2e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 93 4e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 93 5e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 91 1e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 90 4e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 86 5e-17
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 85 9e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 85 1e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 84 2e-16
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 82 7e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 82 9e-16
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 82 1e-15
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 81 2e-15
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 79 7e-15
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 78 2e-14
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 76 5e-14
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 76 5e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 74 2e-13
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 74 2e-13
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 73 5e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 72 1e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 69 6e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 68 1e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 67 3e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 66 6e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 66 6e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 5e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 61 2e-09
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 59 7e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 57 3e-08
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 9e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 50 5e-06
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 583 bits (1502), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/495 (54%), Positives = 361/495 (72%), Gaps = 6/495 (1%)
Query: 1 MVDLPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLL 60
MV PK LSP +L LLKSEKNP +A LF ATRHPGY HS+ V H+LRR+ S+ ++
Sbjct: 1 MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRL-SETRMV 59
Query: 61 PHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
H I+ I + Q C C EDV L+++K Y K SMPD+AL++F++M +FGC P +RS+N
Sbjct: 60 NHVSRIVELIRS-QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
+LLNAF ++QW + E FAYF+TAGV+PN++TYNVLIK+ CKK+EFEKA+G L WM
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G +PD FSY T+IN AK G L+ ALE+FDEMSERGV PDV CYN++IDGF K D A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
E+W+RLL + +V+PNV ++N+MI GLS+CGR + L+IWERMK+NER+ D++TYSSLIH
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
GL GN+D A+ V+ ++ R+ S DVVT N ML G C+ GK++ES ELW M S N
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN 358
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
++SYNI IKGL ENGK++EA IW L+ + A D TTYGI IHGLC NGY+NKAL V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+E E GG +DV+AY+S+I+ LCK++RL++A+ +V M K G +LN+HVCN LI G I++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 481 SNL---TLLFKSLGK 492
S L + + +GK
Sbjct: 478 SRLGEASFFLREMGK 492
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 208/438 (47%), Gaps = 53/438 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF-------AVSEQWERAEK 137
T++ AK D+AL LF +M G P V +N L++ F E W+R
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSER-GVAPDVTCYNILIDGFLKEKDHKTAMELWDR--- 244
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA 197
+ + V PNV+T+N++I L K + + M D ++Y +LI+
Sbjct: 245 ---LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
G+++ A VF+E+ ER DV+ YN ++ GF + G ++ E+W + + +V N+
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NI 359
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL--------------- 302
VSYN++I+GL G+ E+ IW M D TY IHGL
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 303 --SQMGNLD------------------GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
S G+LD A + K+M V + CNA++ GL + +
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 343 VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
+ E+ EMG++G R V+SYNI I GL + GK EA + +L E D TY
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML-ENGWKPDLKTYS 538
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
IL+ GLC++ ++ AL++ + G + DV ++ +I+ LC +LDDA V++ M+ R
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 462 GCKLNTHVCNPLIDGFIK 479
C N N L++GF K
Sbjct: 599 NCTANLVTYNTLMEGFFK 616
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 178/359 (49%), Gaps = 5/359 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L + + E+L L+R M+ + S+N L+ + + + A +
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G + + TY + I LC KA G+++ + G D ++Y ++I+ K+ L
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + EMS+ GVE + N +I G + +A+ + R + + P VVSYN++I
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS-FFLREMGKNGCRPTVVSYNILI 506
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL + G+F E+ + M +N K D+ TYS L+ GL + +D A ++ + +
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNI 383
DV+ N +++GLC GK++++ + M ++ + N+++YN ++G F+ G A I
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
W + + L D +Y ++ GLC ++ A++ ++A + G V+ ++ ++ A+
Sbjct: 627 WGYMY-KMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 168/351 (47%), Gaps = 5/351 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+A ++F ++D V ++N++L F + + + + + + S N+ +YN+
Sbjct: 307 DKAESVFNELDER-KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LIK L + + ++A + R M G DK +YG I+ G +N AL V E+ G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
DV Y IID K +A+ + + + + + V N +I GL R R E+
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC-NALIGGLIRDSRLGEA 483
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
M KN + V +Y+ LI GL + G A K+M+ PD+ T + +L G
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 337 LCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
LC+ K++ + ELW + QSG +V+ +NI I GL GK+++AM + + A
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA- 602
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
+ TY L+ G K G N+A + G D+ +Y++++ LC R
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 245/482 (50%), Gaps = 13/482 (2%)
Query: 9 SPH---------RLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTL 59
SPH +LL+ L+S+ + +AL+LF A++ P ++ A+ + +L R+ +
Sbjct: 40 SPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 99
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
I+ +++++ C L L+++YA+ + DE L++ M FG +P +
Sbjct: 100 -DDMKKILEDMKSSR-CEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N +LN + E A G+ P+V T+NVLIK LC+ + A +L M
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
GL PD+ ++ T++ + GDL+ AL + ++M E G + N+I+ GF K G
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVED 277
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A + + ++ FP+ ++N ++ GL + G ++EI + M + DV+TY+S+I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS- 358
GL ++G + A V MI R SP+ VT N +++ LCK +VEE+ EL + G
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
+V ++N I+GL AM ++E + + D TY +LI LC G L++AL
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
+L++ E G V Y+++I+ CK + +A + M+ G N+ N LIDG
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 479 KN 480
K+
Sbjct: 517 KS 518
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 204/402 (50%), Gaps = 5/402 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF-D 143
T+++ Y + D AL + +M FGC S N +++ F + E A F +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVE-FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G P+ T+N L+ LCK + A ++ M G PD ++Y ++I+ K G++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A+EV D+M R P+ + YN +I K +A E+ R+L + + P+V ++N +
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSL 406
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I+GL ++E++E M+ + D FTY+ LI L G LD A + K M
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
+ V+T N +++G CK K E+ E+++EM G SRN ++YN I GL ++ +VE+A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ + ++ E D TY L+ C+ G + KA +++ G + D+ Y ++I+ L
Sbjct: 527 LMDQMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
CK R++ A+ ++ + +G L H NP+I G + T
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 21/387 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K + +EA L R + G P V +FNSL+ ++ A + F +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+ TYN+LI LC K + ++A +L+ M G +Y TLI+ K
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A E+FDEM GV + + YN +IDG KS A ++ ++++ E P+ +YN ++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLL 547
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK--DMIGRR 322
R G ++ +I + M N + D+ TY +LI GL + G ++ A ++ + M G
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR--NVISYNIFIKGLFE-NGKVEE 379
++P N ++ GL + K E+ L+ EM + + +SY I +GL G + E
Sbjct: 608 LTPHAY--NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLC----KNGYLNKALQVLEEAEHRGGDVDVFAY 435
A++ LL E + ++ +L GL + + V+++A +V
Sbjct: 666 AVDFLVELL-EKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV----- 719
Query: 436 SSMINALCKERRLDDA-AGVVSLMDKR 461
SM+ L K R+ DA A + ++D R
Sbjct: 720 -SMVKGLLKIRKFQDALATLGGVLDSR 745
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
++ C E L+ + + DEALN+ ++M+ + GC V ++N+L++ F + +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKT 486
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
AE+ F + GVS N TYN LI LCK R E A L+ M G +PDK++Y +L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
+ + GD+ A ++ M+ G EPD++ Y +I G K+G A+++ R ++ +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL-RSIQMKG 605
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIW-ERMKKNERKHDVFTYSSLIHGLSQMGN-LDG 310
+ +YN +I+GL R + +E++ ++ E +++NE D +Y + GL G +
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKG 370
A +++ + P+ + + GL +EE+ M +R +KG
Sbjct: 666 AVDFLVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVNMVMQKARFSEEEVSMVKG 724
Query: 371 LFENGKVEEAM 381
L + K ++A+
Sbjct: 725 LLKIRKFQDAL 735
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 148/338 (43%), Gaps = 38/338 (11%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
SP Y ++ L + F+ K +L M ++ LI + A+ + L
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 208 VFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
V D M E G++PD YN +++ G+ LK E+
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISH--------------------- 177
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
+ +W K DV T++ LI L + L A + +DM + PD
Sbjct: 178 --------AKMSVWGI------KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWE 385
T ++ G + G ++ + + E+M + G S + +S N+ + G + G+VE+A+N +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+ + D T+ L++GLCK G++ A+++++ G D DV+ Y+S+I+ LCK
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 446 RRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ +A V+ M R C NT N LI K + +
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 221/452 (48%), Gaps = 41/452 (9%)
Query: 66 IIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
+I E QN S D+ L+ + +RS AL + KM ++ G P + + +SLL
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLL 157
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
N + ++ A PN T+N LI L + +A L+ M G +
Sbjct: 158 NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 217
Query: 184 PDKFSYGTLINAAAKRGDL-----------------------------------NAALEV 208
PD F+YGT++N KRGD+ N AL +
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 209 FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
F EM +G+ P+V+ YN +I G + A+ + ++ E + PNVV+++ +I
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFV 336
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ G+ E+ ++++ M K D+FTYSSLI+G LD A+ +++ MI + P+VV
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
T N ++ G CK +VEE EL+ EM Q G N ++YN I+GLF+ G + A I++ +
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ + + D TY IL+ GLCK G L KAL V E + + D++ Y+ MI +CK +
Sbjct: 457 VSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++D + + +G K N + +I GF +
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 218/411 (53%), Gaps = 16/411 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ KR D AL+L +KM++ V + ++++A + A F D
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TYN LI+ LC + A LL M + P+ ++ LI+A K G L
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +++DEM +R ++PD+ Y+ +I+GF +A M+E ++ ++ FPNVV+YN +I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-FPNVVTYNTLI 402
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + R E +E++ M + + TY++LI GL Q G+ D AQ+++K M+ V
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD++T + +L+GLCK+GK+E++ ++E + +S ++ +YNI I+G+ + GKVE+
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG--- 519
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L L + + Y +I G C+ G +A + E + G + Y+++I A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLN------THVCNPLIDGFIKNSNLTLL 486
+ R D AA + + R C + V N L DG ++ S L +L
Sbjct: 580 --RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 110/239 (46%), Gaps = 37/239 (15%)
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+ ++++++ M ++ + ++ L+ +++M D + + M R+S D+ + N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 332 AML-----------------------------------NGLCKWGKVEESFELWEEM-GQ 355
++ NG C ++ E+ L ++M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 356 SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
N +++N I GLF + K EA+ + + ++ D TYG +++GLCK G ++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
AL +L++ E + DV Y+++I+ALC + ++DA + + MD +G + N N LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 242/455 (53%), Gaps = 5/455 (1%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATR-HPGYTHSSAVLQHVLRRVASDPTLLPHA 63
P+ L P RL++++ ++N ALQ+F +A + HPG+TH+ +L +++ P
Sbjct: 44 PQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVE 103
Query: 64 PHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
+ + C E++ + LL+ Y + ++ +F ++ FG + VRS N+LL
Sbjct: 104 SLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPD-FGVKRSVRSLNTLL 162
Query: 124 NAFAVSEQWERAEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
N +++++ F ++ G++PN+ T N+L+K LCKK + E A +L + +GL
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
P+ +Y T++ RGD+ +A V +EM +RG PD Y +++DG+ K G F +A
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ + + + E + PN V+Y VMIR L + + E+ +++ M + D +I L
Sbjct: 283 VMDDMEKNE-IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI 362
+ +D A +++ M+ PD + +++ LCK G+V E+ +L++E + +++
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLL 401
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
+YN I G+ E G++ EA +W+ + E ++ TY +LI GL KNG + + ++VLEE
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMY-ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
G + + + L K + +DA +VS+
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 38/319 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRV--FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
L+KA K++ + A ++ +D + G P + ++ ++L + E A++
Sbjct: 197 LVKALCKKNDIESA---YKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G P+ TY VL+ CK F +A ++ M + P++ +YG +I A K
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR-------------- 249
A +FDEM ER PD +ID + +A +W ++L+
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 250 -------------------EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
E+ P++++YN +I G+ G +E+ +W+ M + + K
Sbjct: 374 HWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+ FTY+ LI GLS+ GN+ RV ++M+ P+ T + GL K GK E++ ++
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 351 EEMGQSGSRNVISYNIFIK 369
+G + S+ +F+K
Sbjct: 494 SMAVMNGKVDKESWELFLK 512
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI-GR 321
++R GR+ S+ I+ R+ K V + ++L++ L Q D ++K+
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEA 380
++P++ TCN ++ LCK +E ++++ +E+ G N+++Y + G G +E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ E +L + D+TTY +L+ G CK G ++A V+++ E + + Y MI
Sbjct: 246 KRVLEEML-DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
ALCKE++ +A + M +R ++ +C +ID ++
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCED 344
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 161/367 (43%), Gaps = 39/367 (10%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTA--GVSPNVETYNVLIKVLCKKREFEKAKGLLRWM-- 177
L++ + + A + F Y + G + N +TY+ ++ L + R F+ + L+ +
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN 111
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
S ++ + + L+ G +++ +F + + GV+ V N +++ ++ F
Sbjct: 112 SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+ M++ + PN+ + N++++ L + + ++ + + ++ TY++
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
++ G G+++ A+RV ++M+ R PD T +++G CK G+ E+ + ++M
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM---- 287
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
E ++E + TYG++I LCK +A
Sbjct: 288 ---------------EKNEIEP----------------NEVTYGVMIRALCKEKKSGEAR 316
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ +E R D +I+ALC++ ++D+A G+ M K C + + + LI
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Query: 478 IKNSNLT 484
K +T
Sbjct: 377 CKEGRVT 383
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 210/394 (53%), Gaps = 4/394 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL Y +A+ L +M + G RP +F +L++ + + A
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN+ TY V++ LCK+ + + A LL M + D + T+I++ K ++
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM +G+ P+V+ Y+ +I G + A+++ ++ E+ + PN+V++N +I
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALI 337
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+F E+ ++++ M K D+FTY+SL++G LD A+++++ M+ +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PDVVT N ++ G CK +VE+ EL+ EM G + ++Y I+GLF +G + A +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + D TY IL+ GLC NG L KAL+V + + +D++ Y++MI +C
Sbjct: 458 FKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
K ++DD + + +G K N N +I G
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 211/411 (51%), Gaps = 16/411 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ KR D ALNL KM+ V FN+++++ + A F +T
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TY+ LI LC + A LL M + P+ ++ LI+A K G
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +++D+M +R ++PD+ YN +++GF KA +M+E ++ ++ FP+VV+YN +I
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC-FPDVVTYNTLI 407
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + R + E++ M D TY++LI GL G+ D AQ+V+K M+ V
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD++T + +L+GLC GK+E++ E+++ M +S + ++ Y I+G+ + GKV++
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG--- 524
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L L + + TY +I GLC L +A +L++ + G + Y+++I A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTH------VCNPLIDGFIKNSNLTLL 486
R D AA + + R C+ V N L DG + S L +L
Sbjct: 585 --HLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 175/346 (50%), Gaps = 6/346 (1%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEV 208
P++ +N L+ + K ++F+ L M + + ++Y LIN +R ++ AL +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 209 FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
+M + G EP ++ + +++G+ A + ++++ E P+ +++ +I GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLF 201
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ SE++ + +RM + + ++ TY +++GL + G+ D A + M ++ DVV
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELL 387
N +++ LCK+ V+++ L++EM G R NV++Y+ I L G+ +A + +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ E + + T+ LI K G +A ++ ++ R D D+F Y+S++N C R
Sbjct: 322 I-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL---TLLFKSL 490
LD A + M + C + N LI GF K+ + T LF+ +
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 210/399 (52%), Gaps = 7/399 (1%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+ + +AY K +PD+A++LF +M F C+ V+SFNS+LN + R +F+ Y
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 144 TAG----VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ +SPN ++N++IK LCK R ++A + R M PD ++Y TL++ K
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
++ A+ + DEM G P + YN++IDG K GD + ++ + + + V PN V+
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV-PNEVT 294
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
YN +I GL G+ +++ + ERM ++ + TY +LI+GL + A R+ M
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
R + + +++GL K GK EE+ LW +M + G + N++ Y++ + GL GK
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA I ++ L ++ TY L+ G K G +A+QV +E + G + F YS +
Sbjct: 415 EAKEILNRMIASGCLP-NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
I+ LC R+ +A V S M G K +T + +I G
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 182/361 (50%), Gaps = 5/361 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K DEA+ L +M GC P +N L++ R K
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN TYN LI LC K + +KA LL M P+ +YGTLIN K+
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ + M ERG + Y+++I G FK G +A +W R + E+ PN+V Y+V++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW-RKMAEKGCKPNIVVYSVLV 404
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL R G+ +E+ EI RM + + +TYSSL+ G + G + A +V+K+M S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ + +++GLC G+V+E+ +W +M G + + ++Y+ IKGL G ++ A+ +
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 384 WELLLG--ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
+ +L E D TY IL+ GLC +++A+ +L RG D DV ++ +N
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 442 L 442
L
Sbjct: 585 L 585
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 6/297 (2%)
Query: 188 SYGTLINAAAKRGDLNAALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER 246
S+ + A K + A+++F M E + V +N +++ G + + E ++
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 247 LLREE---TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
++ + PN +S+N++I+ L + ++E++ M + + D +TY +L+ GL
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVI 362
+ +D A + +M SP V N +++GLCK G + +L + M G N +
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
+YN I GL GK+++A+++ E ++ + D TYG LI+GL K A+++L
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND-VTYGTLINGLVKQRRATDAVRLLSS 352
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
E RG ++ YS +I+ L KE + ++A + M ++GCK N V + L+DG +
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 179/385 (46%), Gaps = 8/385 (2%)
Query: 102 LFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVL 161
+F+ ++ + G + +S++ ++A S ++ EK + ++ V+ +
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 162 CKKREFEKAKGLL-RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG---- 216
K +KA L R + + S+ +++N G + LE +D +
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ P+ + +N++I K +A E++ R + E P+ +Y ++ GL + R E+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVF-RGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ + + M+ Y+ LI GL + G+L ++ +M + P+ VT N +++G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 337 LCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
LC GK++++ L E M S N ++Y I GL + + +A+ + + E +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM-EERGYHL 360
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+ Y +LI GL K G +A+ + + +G ++ YS +++ LC+E + ++A ++
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKN 480
+ M GC N + + L+ GF K
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKT 445
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ K +EA++L+RKM GC+P + ++ L++ + A++
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+G PN TY+ L+K K E+A + + M G +KF Y LI+ G +
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE--TVFPNVVSYNV 262
A+ V+ +M G++PD + Y+ II G G A +++ +L +E P+VV+YN+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN--------------- 307
++ GL S ++++ M DV T ++ ++ LS+ N
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 308 ------LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
+ GA + + M+G+ ++P T ++ +CK K+ + +
Sbjct: 606 LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 227 IIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+I+ + SGDF ++ R+ E V S+ V+ R + ++++++ RM
Sbjct: 83 MIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPDKAVDLFHRMVDE 141
Query: 287 ER-KHDVFTYSSLIH-----GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKW 340
R K V +++S+++ GL G L+ V + +SP+ ++ N ++ LCK
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRG-LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 341 GKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT 399
V+ + E++ M + + +Y + GL + +++EA+ + + + E +
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVI 259
Query: 400 YGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMD 459
Y +LI GLCK G L + ++++ +G + Y+++I+ LC + +LD A ++ M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 460 KRGCKLNTHVCNPLIDGFIKNSNLT 484
C N LI+G +K T
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRAT 344
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 279 IWERMKKNERKHDVF-----TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
I E+M K+ K F T SS+I + G+ D +++ + R+ V+ +
Sbjct: 59 ISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIERSF 115
Query: 334 LNGLCKWGKV---EESFELWEEMGQS--GSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
+ +GK +++ +L+ M R+V S+N + + G + ++ ++
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 389 GETA---LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
++ + ++ ++I LCK ++++A++V R D + Y ++++ LCKE
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 446 RRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
R+D+A ++ M GC + + N LIDG K +LT + K
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 213/430 (49%), Gaps = 39/430 (9%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + +RS AL + KM ++ G P + + +SLLN + S++ A
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G PN T+N LI L + +A L+ M G +PD +YG ++N KRGD + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ ++M + +EP V+ YN IIDG K A +++ + + + PNVV+Y+ +I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE-METKGIRPNVVTYSSLIS 299
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS- 324
L GR+S++ + M + + DVFT+S+LI + G L A+++Y +M+ R +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 325 ----------------------------------PDVVTCNAMLNGLCKWGKVEESFELW 350
PDVVT N ++ G CK+ +VEE E++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
EM Q G N ++YNI I+GLF+ G + A I++ ++ + + + TY L+ GLCK
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCK 478
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
NG L KA+ V E + + ++ Y+ MI +CK +++D + + +G K +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 470 CNPLIDGFIK 479
N +I GF +
Sbjct: 539 YNTMISGFCR 548
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 216/411 (52%), Gaps = 16/411 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ KR D A NL KM++ PGV +N++++ + + A F +T
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TY+ LI LC + A LL M + PD F++ LI+A K G L
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +++DEM +R ++P ++ Y+ +I+GF +A +M+E ++ + FP+VV+YN +I
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLI 403
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + R E +E++ M + + TY+ LI GL Q G+ D AQ ++K+M+ V
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNI 383
P+++T N +L+GLCK GK+E++ ++E + +S I +YNI I+G+ + GKVE+
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG--- 520
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L L + D Y +I G C+ G +A + +E + G + Y+++I A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTH------VCNPLIDGFIKNSNLTLL 486
++ + +A ++ M R C V N L DG + S L +L
Sbjct: 581 RLRDGDREASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 197/425 (46%), Gaps = 43/425 (10%)
Query: 97 DEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D+A+ LF +M R F P + F+ LL+A A +++ G+ N TY
Sbjct: 63 DDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 155 NVLIKVLCKK-----------------------------------REFEKAKGLLRWMSG 179
++LI C++ + +A L+ M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G +P+ ++ TLI+ + A+ + D M +G +PD++ Y ++++G K GD
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A + + + + + P V+ YN +I GL + ++L +++ M+ + +V TYSSLI
Sbjct: 240 AFNLLNK-MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGS 358
L G A R+ DMI R+++PDV T +A+++ K GK+ E+ +L++EM +S
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
++++Y+ I G + +++EA ++E ++ + D TY LI G CK + + ++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGME 417
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
V E RG + Y+ +I L + D A + M G N N L+DG
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 479 KNSNL 483
KN L
Sbjct: 478 KNGKL 482
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 208/394 (52%), Gaps = 4/394 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL Y +A+ L +M + G RP +F +L++ + + A
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN+ TY V++ LCK+ + + A LL M + D + T+I++ K ++
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM +G+ P+V+ Y+ +I G + A+++ ++ E+ + PN+V++N +I
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALI 262
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+F E+ ++ + M K D+FTY+SLI+G LD A+++++ M+ +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PD+ T N ++ G CK +VE+ EL+ EM G + ++Y I+GLF +G + A +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + D TY IL+ GLC NG L KAL+V + + +D++ Y++MI +C
Sbjct: 383 FKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
K ++DD + + +G K N N +I G
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 208/411 (50%), Gaps = 16/411 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ KR D A NL KM+ V FN+++++ + A F +T
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TY+ LI LC + A LL M + P+ ++ LI+A K G
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++ D+M +R ++PD+ YN +I+GF KA +M+E ++ ++ FP++ +YN +I
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD-CFPDLDTYNTLI 332
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + R + E++ M D TY++LI GL G+ D AQ+V+K M+ V
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD++T + +L+GLC GK+E++ E+++ M +S + ++ Y I+G+ + GKV++
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG--- 449
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L L + + TY +I GLC L +A +L++ + G D Y+++I A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTH------VCNPLIDGFIKNSNLTLL 486
R D AA + + R C+ V N L DG + S L +L
Sbjct: 510 --HLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 190/370 (51%), Gaps = 3/370 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + FN LL+A A ++++ G+S N+ TYN+LI C++ + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M +G P + +L+N ++ A+ + D+M E G PD + + +I G F
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
+A + +R++ + PN+V+Y V++ GL + G + + +M+ + + DV
Sbjct: 128 HNKASEAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
++++I L + ++D A ++K+M + + P+VVT +++++ LC +G+ ++ +L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ + N++++N I + GK EA + + ++ + ++ D TY LI+G C +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDR 305
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
L+KA Q+ E + D+ Y+++I CK +R++D + M RG +T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 473 LIDGFIKNSN 482
LI G + +
Sbjct: 366 LIQGLFHDGD 375
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 72 AAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
+++C D TL+K + K ++ LFR+M G ++ +L+
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGD 375
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
+ A+K F + GV P++ TY++L+ LC + EKA + +M ++ D + Y T
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+I K G ++ ++F +S +GV+P+V+ YN +I G +A + ++ ++E+
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKED 494
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
P+ +YN +IR R G + S E+ M+ D T L+ + G LD
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLD 551
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 214/410 (52%), Gaps = 16/410 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ KR D AL+L +KM++ PGV +N++++A + A F D
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ PNV TYN LI+ LC + A LL M + P+ ++ LI+A K G L A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+++DEM +R ++PD+ Y+ +I+GF +A M+E ++ ++ FPNVV+YN +I+
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-FPNVVTYNTLIK 404
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + R E +E++ M + + TY++LIHG Q D AQ V+K M+ V P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D++T + +L+GLC GKVE + ++E + +S ++ +YNI I+G+ + GKVE+ W
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG---W 521
Query: 385 ELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+L L + + TY ++ G C+ G +A + E + G D Y+++I A
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTH------VCNPLIDGFIKNSNLTLL 486
++ D AA + + R C+ V N L DG + S L +L
Sbjct: 582 LRDG--DKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 214/452 (47%), Gaps = 41/452 (9%)
Query: 66 IIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
+I E QN S ++ L+ + +RS AL + KM ++ G P + + NSLL
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLL 158
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
N F + A G P+ T+N LI L + +A L+ M G +
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
PD +YG ++N KRGD++ AL + +M + +EP V+ YN IID + A +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFS----------------------------- 274
+ + + + PNVV+YN +IR L GR+S
Sbjct: 279 FTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 275 ------ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
E+ ++++ M K D+FTYSSLI+G LD A+ +++ MI + P+VV
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
T N ++ G CK +V+E EL+ EM Q G N ++Y I G F+ + + A +++ +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ + L D TY IL+ GLC NG + AL V E + + D++ Y+ MI +CK +
Sbjct: 458 VSDGVLP-DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++D + + +G K N ++ GF +
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNI 366
LD A ++ DM+ R P +V + +L+ + K K + L E+M G S N+ +Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I ++ A+ + ++ + D T L++G C ++ A+ ++ +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLL 486
G D F ++++I+ L + R +A +V M +GC+ + +++G K ++ L
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 487 FKSLGK 492
L K
Sbjct: 241 LSLLKK 246
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 206/393 (52%), Gaps = 4/393 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A K D ++L +KM+ V G R + +FN ++N F Q A
Sbjct: 91 LLSAIVKLKKYDVVISLGKKME-VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 149
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P+ T L+ C++ A L+ M +G +PD +Y +I++ K +N A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ F E+ +G+ P+V+ Y +++G S + A + +++++ + PNV++Y+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLD 268
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G+ E+ E++E M + D+ TYSSLI+GL +D A +++ M+ +
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
DVV+ N ++NG CK +VE+ +L+ EM Q G N ++YN I+G F+ G V++A +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ ++ D TY IL+ GLC NG L KAL + E+ + R D+D+ Y+++I +CK
Sbjct: 389 SQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
++++A + + +G K + ++ G
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 186/346 (53%), Gaps = 8/346 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ + +R+ +A++L KM + G +P + ++N+++++ +++ A FF +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TY L+ LC + A LL M + P+ +Y L++A K G +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A E+F+EM ++PD++ Y+ +I+G +AN+M++ L+ + +VVSYN +I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD-LMVSKGCLADVVSYNTLI 337
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + R + ++++ M + + TY++LI G Q G++D AQ + M +S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNI 383
PD+ T N +L GLC G++E++ ++E+M + ++++Y I+G+ + GKVEEA
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA--- 454
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
W L L L D TY ++ GLC G L++ + + + G
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 58/246 (23%)
Query: 52 RVASDPTLLPHAPHIIGAI------EAAQNCN------CSEDVPL--TLLKAYAKRSMPD 97
R++ DP ++ ++ I G EA Q + C DV TL+ + K +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
+ + LFR+M + G ++N+L+ F + ++A++FF+ D G+SP++ TYN+L
Sbjct: 348 DGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 158 -----------------------------------IKVLCKKREFEKAKGLLRWMSGVGL 182
I+ +CK + E+A L +S GL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+PD +Y T+++ +G L+ ++ +M + G+ + D GD + E
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAE 518
Query: 243 MWERLL 248
+ +++L
Sbjct: 519 LIKKML 524
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 196/378 (51%), Gaps = 4/378 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A +K D + L+ +M ++ G + + N LLN F Q A F
Sbjct: 87 LLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL 145
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T+ L+ C+ A + M G+G +P+ Y T+I+ K ++ A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L++ + M + G+ PDV+ YN +I G SG + A M + + E ++P+V ++N +I
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE-IYPDVFTFNALID 264
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ GR SE+ E +E M + D+ TYS LI+GL LD A+ ++ M+ + P
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIW 384
DVVT + ++NG CK KVE +L+ EM Q G RN ++Y I I+G GK+ A I+
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++ + + TY +L+HGLC NG + KAL +L + + G D D+ Y+ +I +CK
Sbjct: 385 RRMV-FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 445 ERRLDDAAGVVSLMDKRG 462
+ DA + ++ +G
Sbjct: 444 AGEVADAWDIYCSLNCQG 461
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 17/433 (3%)
Query: 26 ALQLFQHATRH---PGYTHSSAVLQHVLRRVASDPTL-LPHAPHIIGAIEAAQNCNCSED 81
+L LF H + P S +L + + D + L ++G CN
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN---- 120
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
LL + + S AL+ KM ++ G P + +F SLLN F ++ A F
Sbjct: 121 ---ILLNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
G PNV YN +I LCK ++ + A LL M G+ PD +Y +LI+ G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
+ A + M++R + PDV +N +ID K G +A E +E ++R ++ P++V+Y+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYS 295
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++I GL R E+ E++ M DV TYS LI+G + ++ +++ +M R
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
V + VT ++ G C+ GK+ + E++ M G N+I+YN+ + GL +NGK+E+A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ I + + + D TY I+I G+CK G + A + +G D++ Y++M+
Sbjct: 416 LVILA-DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 441 ALCKE--RRLDDA 451
L K+ RR DA
Sbjct: 475 GLYKKGLRREADA 487
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 43/390 (11%)
Query: 97 DEALNLFRKMDRVFGCRP--GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D++L+LF M + CRP + F+ LL+A + ++++ + G+ N+ T
Sbjct: 63 DDSLDLFFHMVQ---CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N+L+ C+ + A L M +G P ++G+L+N + + AL +FD+M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +P NVV YN +I GL + +
Sbjct: 180 MGYKP------------------------------------NVVIYNTIIDGLCKSKQVD 203
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
+L++ RM+K+ DV TY+SLI GL G A R+ M R + PDV T NA++
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 335 NGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+ K G+V E+ E +EEM +S ++++Y++ I GL +++EA ++ ++ +
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
D TY ILI+G CK+ + +++ E RG + Y+ +I C+ +L+ A
Sbjct: 324 P-DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ M G N N L+ G N +
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 133/244 (54%), Gaps = 1/244 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V +FN+L++A + AE+F+ + P++ TY++LI LC ++A+ +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
+M G PD +Y LIN K + +++F EMS+RGV + + Y ++I G+ +
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
+G A E++ R++ V PN+++YNV++ GL G+ ++L I M+KN D+
Sbjct: 374 AGKLNVAEEIFRRMVFC-GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY+ +I G+ + G + A +Y + + + PD+ T M+ GL K G E+ L+ +M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 354 GQSG 357
+ G
Sbjct: 493 KEDG 496
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 150/303 (49%), Gaps = 3/303 (0%)
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
P + L++A +K + + ++++M G+ ++ N++++ F + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
++++ P++V++ ++ G R R ++L ++++M K +V Y+++I GL
Sbjct: 139 LGKMIKLGHE-PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVI 362
+ +D A + M + PDVVT N++++GLC G+ ++ + M + +V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++N I + G+V EA +E ++ +L D TY +LI+GLC L++A ++
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+G DV YS +IN CK ++++ + M +RG NT LI G+ +
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 483 LTL 485
L +
Sbjct: 377 LNV 379
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 2/232 (0%)
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
+ N Y M+R R + +SL+++ M + + +S L+ +S+M D
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY 102
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLF 372
+++ M + ++ TCN +LN C+ ++ + +M + G +++++ + G
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
+V +A+ +++ ++G + Y +I GLCK+ ++ AL +L E G DV
Sbjct: 163 RGDRVYDALYMFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
Y+S+I+ LC R DA +VS M KR + N LID +K ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K + + LF +M + R V ++ L+ + + + AE+ F
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTV-TYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV PN+ TYNVL+ LC + EKA +L M G+ D +Y +I K G++ A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
+++ ++ +G+ PD+ Y ++ G +K G +A+ ++ R ++E+ + PN
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF-RKMKEDGILPN 500
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 249/523 (47%), Gaps = 65/523 (12%)
Query: 16 LLKSEKNPHSALQLFQHATRHPGYT-HSSAVLQHVLRR-------------VASDPTLLP 61
LLKS+ + L+ A H +T + H+L + VA+
Sbjct: 55 LLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDE 114
Query: 62 HAPHIIGAIEAAQN-CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
+A + +++ + C + V ++K+Y++ S+ D+AL++ + + G PGV S+N
Sbjct: 115 YASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYN 173
Query: 121 SLLNA------------------------------------FAVSEQWERAEKFFAYFDT 144
++L+A F + + A F +T
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PNV TYN LI CK R+ + LLR M+ GL P+ SY +IN + G +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
V EM+ RG D + YN +I G+ K G+F +A M +LR + P+V++Y +I
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLI 352
Query: 265 RGLSRCGRFSESLEIWERMK-----KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ + G + ++E ++M+ NER TY++L+ G SQ G ++ A RV ++M
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNER-----TYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
SP VVT NA++NG C GK+E++ + E+M + G S +V+SY+ + G + V+
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA+ + ++ E + D+ TY LI G C+ +A + EE G D F Y+++
Sbjct: 468 EALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
INA C E L+ A + + M ++G + + LI+G K S
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 193/367 (52%), Gaps = 4/367 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L++ + D AL LF KM+ GC P V ++N+L++ + + + K
Sbjct: 211 LIRGFCFAGNIDVALTLFDKME-TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ PN+ +YNV+I LC++ ++ +L M+ G D+ +Y TLI K G+ + A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L + EM G+ P V+ Y +I K+G+ +A E ++ +R + PN +Y ++
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ-MRVRGLCPNERTYTTLVD 388
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G S+ G +E+ + M N V TY++LI+G G ++ A V +DM + +SP
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
DVV+ + +L+G C+ V+E+ + EM + G + + I+Y+ I+G E + +EA +++
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
E +L L D TY LI+ C G L KALQ+ E +G DV YS +IN L K
Sbjct: 509 EEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 445 ERRLDDA 451
+ R +A
Sbjct: 568 QSRTREA 574
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 204/401 (50%), Gaps = 26/401 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+K Y K +AL + +M R G P V ++ SL+++ + RA +F
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PN TY L+ +K +A +LR M+ G P +Y LIN G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ V ++M E+G+ PDV+ Y+ ++ GF +S D +A + +R + E+ + P+ ++Y+ +I
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV-KREMVEKGIKPDTITYSSLI 492
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G R E+ +++E M + D FTY++LI+ G+L+ A +++ +M+ + V
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 325 PDVVTCNAMLNGLCKWGKVEESFEL-----WEEMGQSGS--------------RNVISYN 365
PDVVT + ++NGL K + E+ L +EE S ++V+S
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS-- 610
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
IKG G + EA ++E +LG+ D T Y I+IHG C+ G + KA + +E
Sbjct: 611 -LIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
G + +++ AL KE ++++ V+ + R C+L+
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVI-VHVLRSCELS 708
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 203/448 (45%), Gaps = 58/448 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y K D+ L R M + G P + S+N ++N + + +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G S + TYN LIK CK+ F +A + M GL P +Y +LI++ K G++N
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET---VFPNVVSYN 261
A+E D+M RG+ P+ Y ++DGF + G NE + R+LRE P+VV+YN
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKG---YMNEAY-RVLREMNDNGFSPSVVTYN 419
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+I G G+ +++ + E MK+ DV +YS+++ G + ++D A RV ++M+ +
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR---------------------- 359
+ PD +T ++++ G C+ + +E+ +L+EEM + G
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 360 --------------NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI--- 402
+V++Y++ I GL + + EA + L E ++ D T + +
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 403 -----------LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
LI G C G + +A QV E + D AY+ MI+ C+ + A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ M K G L+T L+ K
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHK 687
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 73/400 (18%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ + K + A+ +M RV G P R++ +L++ F+ A + +
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G SP+V TYN LI C + E A +L M GL PD SY T+++ + D++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR--------------- 249
AL V EM E+G++PD + Y+ +I GF + +A +++E +LR
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 250 -------------------EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
E+ V P+VV+Y+V+I GL++ R E+ + ++ E
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 291 DVFTYS---------------SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
TY SLI G G + A +V++ M+G+ PD N M++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 336 GLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
G C+ G + +++ L++EM +SG + ++ +K L + GKV E +N
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE-LN------------ 695
Query: 395 VDSTTYGILIHGLCKNGYLNKALQ--VLEEAEHRGGDVDV 432
+++H L ++ L++A Q VL E HR G++DV
Sbjct: 696 ------SVIVHVL-RSCELSEAEQAKVLVEINHREGNMDV 728
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 204/382 (53%), Gaps = 5/382 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
DEA++LF KM + C P VR++ L+ + SE+ A + G+ PN+ TY V
Sbjct: 305 DEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI LC + +FEKA+ LL M GL P+ +Y LIN KRG + A++V + M R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ P+ YN +I G+ KS + KA + ++L E V P+VV+YN +I G R G F +
Sbjct: 424 LSPNTRTYNELIKGYCKS-NVHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ M D +TY+S+I L + ++ A ++ + + V+P+VV A+++G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 337 LCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
CK GKV+E+ + E+M ++ N +++N I GL +GK++EA + E ++ + L
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-KIGLQP 600
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+T ILIH L K+G + A ++ G D Y++ I C+E RL DA ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 456 SLMDKRGCKLNTHVCNPLIDGF 477
+ M + G + + LI G+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGY 682
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 243/483 (50%), Gaps = 37/483 (7%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHII 67
+SP + +L + +P +AL +++P Y HS + AS TLL + ++
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHS-------VYSYASLLTLLINNGYV- 139
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDR----------VFGCRPGVR 117
G + + L ++K+ L+L RKM++ + GC
Sbjct: 140 GVVFK---------IRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGC----- 185
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
+N+LLN+ A + ++ + V PN+ TYN ++ CK E+A + +
Sbjct: 186 -YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
GL PD F+Y +LI +R DL++A +VF+EM +G + + Y +I G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+A +++ + ++++ FP V +Y V+I+ L R SE+L + + M++ K ++ TY+
Sbjct: 305 DEAMDLFVK-MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQS 356
LI L + A+ + M+ + + P+V+T NA++NG CK G +E++ ++ E M +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 357 GSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
S N +YN IKG + V +AM + +L L D TY LI G C++G + A
Sbjct: 424 LSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSA 481
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
++L RG D + Y+SMI++LCK +R+++A + ++++G N + LIDG
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 477 FIK 479
+ K
Sbjct: 542 YCK 544
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 201/400 (50%), Gaps = 5/400 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ Y +R D A +F +M + GCR ++ L++ V+ + + A F
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMP-LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
P V TY VLIK LC +A L++ M G++P+ +Y LI++ +
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A E+ +M E+G+ P+V+ YN +I+G+ K G A ++ E L+ + PN +YN +I
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE-LMESRKLSPNTRTYNELI 435
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + +++ + +M + + DV TY+SLI G + GN D A R+ M R +
Sbjct: 436 KGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PD T +M++ LCK +VEE+ +L++ + Q G + NV+ Y I G + GKV+EA +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
E +L + L +S T+ LIHGLC +G L +A + E+ G V + +I+ L
Sbjct: 555 LEKMLSKNCLP-NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
K+ D A M G K + H I + + L
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 142/273 (52%), Gaps = 3/273 (1%)
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
DE E + + CYN +++ + G + +++ +L E+ V PN+ +YN M+ G +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML-EDKVCPNIYTYNKMVNGYCK 230
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
G E+ + ++ + D FTY+SLI G Q +LD A +V+ +M + + V
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLL 388
+++GLC +++E+ +L+ +M V +Y + IK L + + EA+N+ + +
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK-EM 349
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
ET + + TY +LI LC KA ++L + +G +V Y+++IN CK +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 449 DDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
+DA VV LM+ R NT N LI G+ K++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 187/412 (45%), Gaps = 23/412 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K +EA +LF +++ G P V + +L++ + + + + A +
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
PN T+N LI LC + ++A L M +GL+P + LI+ K GD +
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A F +M G +PD Y I + + G L A +M ++ RE V P++ +Y+ +I
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLI 679
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH------------------GLSQMG 306
+G G+ + + ++ +RM+ + T+ SLI +S M
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--SRNVISY 364
D + + M+ V+P+ + ++ G+C+ G + + ++++ M ++ S + + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
N + + K EA + + ++ L + +LI GL K G + V +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLP-QLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
G D A+ +I+ + K+ ++ + ++M+K GCK ++ + LI+G
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 206/395 (52%), Gaps = 7/395 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L AK D ++LF M+ V G + S+N ++N ++ A
Sbjct: 75 VLSKIAKSKNYDLVISLFHHME-VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF 133
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P+V T + LI C+ A L+ M +G RPD Y T+I+ + K G +N A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+E+FD M GV D + YN ++ G SG + A + ++ + V PNV+++ +I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV-PNVITFTAVID 252
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G+FSE+++++E M + DVFTY+SLI+GL G +D A+++ M+ + P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
DVVT N ++NG CK +V+E +L+ EM Q G + I+YN I+G F+ G+ + A I+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + TY IL++GLC N + KAL + E + ++D+ Y+ +I+ +CK
Sbjct: 373 SRMDSRPNIR----TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++DA + + +G K + +I GF +
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 140/244 (57%), Gaps = 4/244 (1%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V +F ++++ F ++ A K + V P+V TYN LI LC ++AK +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M G PD +Y TLIN K ++ ++F EM++RG+ D + YN II G+F+
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
+G A E++ R+ PN+ +Y++++ GL R ++L ++E M+K+E + D+
Sbjct: 362 AGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY+ +IHG+ ++GN++ A +++ + + + PDVV+ M++G C+ + ++S L+ +M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 354 GQSG 357
+ G
Sbjct: 478 QEDG 481
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 36/266 (13%)
Query: 4 LPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHA 63
+P ++ ++++ E A++L++ TR DP + +
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-----------------CVDPDVFTYN 283
Query: 64 PHIIGAI------EAAQNCN------CSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRV 109
I G EA Q + C DV TL+ + K DE LFR+M +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G ++N+++ + + + + A++ F+ D+ PN+ TY++L+ LC EK
Sbjct: 344 -GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEK 399
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A L M + D +Y +I+ K G++ A ++F +S +G++PDV+ Y +I
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 230 GFFKSGDFLKANEMWERLLREETVFP 255
GF + + K++ ++ R ++E+ + P
Sbjct: 460 GFCRKRQWDKSDLLY-RKMQEDGLLP 484
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 201/396 (50%), Gaps = 4/396 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL Y +A+ L +M + G +P +F +L++ + + A
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P++ TY ++ LCK+ + + A LL+ M + D Y T+I+ K ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM +G+ PDV Y+ +I G + A+ + ++ E + PNVV+++ +I
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALI 335
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ E+ ++++ M K D+FTYSSLI+G LD A+ +++ MI +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P+VVT + ++ G CK +VEE EL+ EM Q G N ++Y I G F+ + A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + TY IL+ GLCKNG L KA+ V E + + D++ Y+ MI +C
Sbjct: 456 FKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
K +++D + + +G N N +I GF +
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 203/399 (50%), Gaps = 4/399 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A AK + + ++L +M + G + +++ +N F Q A A
Sbjct: 89 LLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T + L+ C + A L+ M +G +PD F++ TLI+ + A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ + D+M +RG +PD++ Y +++G K GD A + +++ + + +VV YN +I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIID 266
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GL + ++L ++ M + DVFTYSSLI L G A R+ DMI R+++P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT +A+++ K GK+ E+ +L++EM +S ++ +Y+ I G + +++EA +++
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
EL++ + + TY LI G CK + + +++ E RG + Y+++I+ +
Sbjct: 387 ELMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
R D+A V M G N N L+DG KN L
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ A+ K EA L+ +M + P + +++SL+N F + ++ + A+ F +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
PNV TY+ LIK CK + E+ L R MS GL + +Y TLI+ + D + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
VF +M GV P+++ YN+++DG K+G KA ++E L R T+ P++ +YN+MI
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIE 511
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+ + G+ + E++ + +V Y+++I G + G+ + A + K M P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
+ T N ++ + G E S EL +EM G S + + +G+++++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
LS + +D A ++ DM+ R P +V N +L+ + K K E L E+M G S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ +Y+IFI ++ A+ + ++ + D T L++G C + ++ A+ ++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
++ G D F ++++I+ L + +A +V M +RGC+ + +++G K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 481 SNLTLLFKSLGK 492
++ L L K
Sbjct: 237 GDIDLALSLLKK 248
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 210/418 (50%), Gaps = 7/418 (1%)
Query: 66 IIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
+I E QN S ++ + + +RS AL + KM ++ G P + + NSLL
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKL-GYGPSIVTLNSLL 152
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
N F + A G P+ T+ L+ L + + +A L+ M G +
Sbjct: 153 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
PD +YG +IN KRG+ + AL + ++M + +E DV+ YN IIDG K A ++
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
+ + + + + P+V +YN +I L GR+S++ + M + D+ +++LI
Sbjct: 273 FNK-METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 304 QMGNLDGAQRVYKDMI-GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNV 361
+ G L A+++Y +M+ + PDVV N ++ G CK+ +VEE E++ EM Q G N
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
++Y I G F+ + A +++ ++ + + D TY IL+ GLC NG + AL V E
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ R +D+ Y++MI ALCK +++D + + +G K N ++ GF +
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 209/411 (50%), Gaps = 15/411 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + + EA+ L +M V GC+P + ++ +++N + + A +
Sbjct: 185 TLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ +V YN +I LCK + + A L M G++PD F+Y LI+ G +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + +M E+ + PD++ +N +ID F K G ++A ++++ +++ + FP+VV+YN +I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+G + R E +E++ M + + TY++LIHG Q + D AQ V+K M+ V
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD++T N +L+GLC G VE + ++E M + + ++++Y I+ L + GKVE+
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG--- 480
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L L + + TY ++ G C+ G +A + E + G + Y+++I A
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTH------VCNPLIDGFIKNSNLTLL 486
+ R D+AA + + R C V N L DG + S L +L
Sbjct: 541 --RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
FP++V ++ ++ +++ +F + + E+M+ H+++TYS I+ + L A
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFE 373
+ M+ P +VT N++LNG C ++ E+ L ++
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ--------------------- 170
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
+ E D+ T+ L+HGL ++ ++A+ ++E +G D+
Sbjct: 171 --------------MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
Y ++IN LCK D A +++ M+K + + + N +IDG K ++ F K
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 203/396 (51%), Gaps = 4/396 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL Y +A+ L +M + G RP +F +L++ + + A
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN+ TY V++ LCK+ + + A LL M + + Y T+I++ K +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM +GV P+V+ Y+ +I + A+ + ++ E + PNVV++N +I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERKINPNVVTFNALI 337
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ E+ ++++ M K D+FTYSSLI+G LD A+ +++ MI +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P+VVT N ++NG CK +++E EL+ EM Q G N ++Y I G F+ + A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + + TY L+ GLCKNG L KA+ V E + + ++ Y+ MI +C
Sbjct: 458 FKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
K +++D + + +G K + + N +I GF +
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 180/346 (52%), Gaps = 8/346 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ KR D A NL KM+ V +++++++ + A F +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV PNV TY+ LI LC + A LL M + P+ ++ LI+A K G L
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +++DEM +R ++PD+ Y+ +I+GF +A M+E ++ ++ FPNVV+YN +I
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-FPNVVTYNTLI 407
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + R E +E++ M + + TY++LIHG Q + D AQ V+K M+ V
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNI 383
P+++T N +L+GLCK GK+E++ ++E + +S I +YNI I+G+ + GKVE+
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG--- 524
Query: 384 WELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
W+L L + D Y +I G C+ G +A + + G
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 200/399 (50%), Gaps = 4/399 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A AK D ++L KM R+ G + ++N L+N F Q A
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T + L+ C + A L+ M +G RPD ++ TLI+ + A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ + D M +RG +P+++ Y ++++G K GD A + ++ + NVV Y+ +I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVID 268
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L + ++L ++ M+ + +V TYSSLI L A R+ DMI R+++P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT NA+++ K GK+ E+ +L++EM +S ++ +Y+ I G + +++EA +++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
EL++ + + TY LI+G CK +++ +++ E RG + Y+++I+ +
Sbjct: 389 ELMISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
R D+A V M G N N L+DG KN L
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K DE + LFR+M + G ++ +L++ F + + A+ F +
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV PN+ TYN L+ LCK + EKA + ++ + P ++Y +I K G +
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
++F +S +GV+PDV+ YN +I GF + G +A+ ++ R +RE+ P+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF-RKMREDGPLPD 574
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 204/393 (51%), Gaps = 7/393 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ Y K + AL++ +M P V ++N++L + S + ++A +
Sbjct: 178 MISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
P+V TY +LI+ C+ A LL M G PD +Y L+N K G L+ A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++ ++M G +P+V+ +N+I+ +G ++ A ++ +LR+ P+VV++N++I
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILIN 352
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L R G +++I E+M ++ + + +Y+ L+HG + +D A + M+ R P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIW 384
D+VT N ML LCK GKVE++ E+ ++ G V I+YN I GL + GK +A+ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + + L D+ TY L+ GL + G +++A++ E E G + ++S++ LCK
Sbjct: 473 DEMRAKD-LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
R+ D A + M RGCK N LI+G
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 6/361 (1%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N+ L + + E KF G P++ LI+ C+ + KA +L + G
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G PD +Y +I+ K G++N AL V D MS V PDV+ YN I+ SG +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A E+ +R+L+ + +P+V++Y ++I R ++++ + M+ DV TY+ L+
Sbjct: 223 AMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-S 358
+G+ + G LD A + DM P+V+T N +L +C G+ ++ +L +M + G S
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
+V+++NI I L G + A++I E + + +S +Y L+HG CK +++A++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILE-KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
LE RG D+ Y++M+ ALCK+ +++DA +++ + +GC N +IDG
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 479 K 479
K
Sbjct: 461 K 461
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 190/354 (53%), Gaps = 6/354 (1%)
Query: 77 NCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
+C DV L++A + S A+ L +M R GC P V ++N L+N + +
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A KF ++G PNV T+N++++ +C + A+ LL M G P ++ LIN
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
++G L A+++ ++M + G +P+ + YN ++ GF K +A E ER++ +
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCY 411
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P++V+YN M+ L + G+ +++EI ++ + TY+++I GL++ G A ++
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFE 373
+M + + PD +T ++++ GL + GKV+E+ + + E + G R N +++N + GL +
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ + + A++ ++ + T+Y ILI GL G +AL++L E ++G
Sbjct: 532 SRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 185/365 (50%), Gaps = 6/365 (1%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + +L+ F + +A K + +G P+V TYNV+I CK E A +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L MS + PD +Y T++ + G L A+EV D M +R PDV+ Y ++I+ +
Sbjct: 195 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
A ++ + + R+ P+VV+YNV++ G+ + GR E+++ M + + +V
Sbjct: 252 DSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
T++ ++ + G A+++ DM+ + SP VVT N ++N LC+ G + + ++ E+M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
Q G + N +SYN + G + K++ A+ E ++ D TY ++ LCK+G
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGK 429
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
+ A+++L + +G + Y+++I+ L K + A ++ M + K +T +
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 473 LIDGF 477
L+ G
Sbjct: 490 LVGGL 494
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 178/335 (53%), Gaps = 7/335 (2%)
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
+VE+ N L + + + E E+ L M G PD TLI + G A ++
Sbjct: 102 DVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
+ + G PDV+ YN++I G+ K+G+ A + +R+ +V P+VV+YN ++R L
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCD 216
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
G+ +++E+ +RM + + DV TY+ LI + + A ++ +M R +PDVVT
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLL 388
N ++NG+CK G+++E+ + +M SG + NVI++NI ++ + G+ +A + +L
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
+ T+ ILI+ LC+ G L +A+ +LE+ G + +Y+ +++ CKE+++
Sbjct: 337 -RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 449 DDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
D A + M RGC + N ++ K+ +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 5/326 (1%)
Query: 65 HIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
H + ++ ++ C+ DV L+ K DEA+ M GC+P V + N +
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNII 315
Query: 123 LNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
L + + +W AEK A G SP+V T+N+LI LC+K +A +L M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+P+ SY L++ K ++ A+E + M RG PD++ YN ++ K G A E
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ + L + P +++YN +I GL++ G+ +++++ + M+ + K D TYSSL+ GL
Sbjct: 436 ILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NV 361
S+ G +D A + + + + P+ VT N+++ GLCK + + + + M G + N
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELL 387
SY I I+GL G +EA+ + L
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RN 360
+ + G L+ + ++M+ PD++ C ++ G C+ GK ++ ++ E + SG+ +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
VI+YN+ I G + G++ A+++ L +++ D TY ++ LC +G L +A++VL
Sbjct: 172 VITYNVMISGYCKAGEINNALSV----LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ R DV Y+ +I A C++ + A ++ M RGC + N L++G K
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 481 SNLTLLFKSL 490
L K L
Sbjct: 288 GRLDEAIKFL 297
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ AK +A+ L +M R +P +++SL+ + + + A KFF F+
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PN T+N ++ LCK R+ ++A L +M G +P++ SY LI A G
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 205 ALEVFDEMSERGV 217
ALE+ +E+ +G+
Sbjct: 573 ALELLNELCNKGL 585
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 222/442 (50%), Gaps = 41/442 (9%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ AY+ + + +EA L M G PGV ++N+++N ++ERA++ FA
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 145 AGVSPNVETYNVLIKVLCKKRE-----------------------------------FEK 169
+G+SP+ TY L+ CKK + +K
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A + GL PD Y LI ++G ++ A+ + +EM ++G DV+ YN I+
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
G K +A++++ + E +FP+ + ++I G + G ++E++++MK+ +
Sbjct: 454 GLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
DV TY++L+ G ++G++D A+ ++ DM+ + + P ++ + ++N LC G + E+F +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
W+EM + V+ N IKG +G + + E ++ E D +Y LI+G
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFV 631
Query: 409 KNGYLNKALQVLEEAEHRGGDV--DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
+ ++KA ++++ E G + DVF Y+S+++ C++ ++ +A V+ M +RG +
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 467 THVCNPLIDGFIKNSNLTLLFK 488
+I+GF+ NLT F+
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFR 713
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 199/378 (52%), Gaps = 3/378 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P + ++N+L++A++ E A + G SP V TYN +I LCK ++E+A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
K + M GL PD +Y +L+ A K+GD+ +VF +M R V PD++C++ ++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F +SG+ KA M+ ++E + P+ V Y ++I+G R G S ++ + M +
Sbjct: 385 FTRSGNLDKA-LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
DV TY++++HGL + L A +++ +M R + PD T +++G CK G ++ + EL+
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
++M + R +V++YN + G + G ++ A IW ++ + L +Y IL++ LC
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT-PISYSILVNALCS 562
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
G+L +A +V +E + V +SMI C+ D + M G +
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 470 CNPLIDGFIKNSNLTLLF 487
N LI GF++ N++ F
Sbjct: 623 YNTLIYGFVREENMSKAF 640
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 175/351 (49%), Gaps = 3/351 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + F+S+++ F S ++A +F AG+ P+ Y +LI+ C+K A L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M G D +Y T+++ KR L A ++F+EM+ER + PD ++IDG K
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G+ A E+++++ +E+ + +VV+YN ++ G + G + EIW M E
Sbjct: 493 LGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
+YS L++ L G+L A RV+ +MI + + P V+ CN+M+ G C+ G + E+M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA-LAVDSTTYGILIHGLCKNG 411
G + ISYN I G + +A + + + E L D TY ++HG C+
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 412 YLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+ +A VL + RG + D Y+ MIN + L +A + M +RG
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 237/528 (44%), Gaps = 56/528 (10%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLF--QHATRHPGYTHSSAVLQ---HVLRRVA----SDPT 58
L+P ++ +L +N + Q F Q P + H+S L H+L R +
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSC 135
Query: 59 LLPHAP-------HIIGAIEAA-QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVF 110
LL I+ ++++ NC ++ V L++ Y + EA F + R
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLL-RSK 194
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G + + N+L+ + E A + +GV NV T N+++ LCK + EK
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L + G+ PD +Y TLI+A + +G + A E+ + M +G P V YN +I+G
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K G + +A E++ +LR + P+ +Y ++ + G E+ +++ M+ +
Sbjct: 315 LCKHGKYERAKEVFAEMLR-SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D+ +SS++ ++ GNLD A + + + PD V ++ G C+ G + + L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
EM Q G + +V++YN + GL + + EA ++ + E AL DS T ILI G CK
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-ERALFPDSYTLTILIDGHCK 492
Query: 410 NGYLNKALQVLEEAEHRG------------------GDVDV-----------------FA 434
G L A+++ ++ + + GD+D +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
YS ++NALC + L +A V M + K +CN +I G+ ++ N
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G + +V TYN ++ LCK++ +A L M+ L PD ++ LI+ K G+L A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+E+F +M E+ + DV+ YN ++DGF K GD A E+W ++ +E + P +SY++++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISYSILVN 558
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L G +E+ +W+ M K V +S+I G + GN + + MI P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS---RNVISYNIFIKGLFENGKVEEAMN 382
D ++ N ++ G + + ++F L ++M + +V +YN + G +++EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ ++ E + D +TY +I+G L +A ++ +E RG D
Sbjct: 679 VLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 78 CSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C+ DV T+L KR M EA LF +M P + L++ + A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+ F + +V TYN L+ K + + AK + M + P SY L+NA
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+G L A V+DEM + ++P VM N +I G+ +SG+ E+++ E V P
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-P 618
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK--HDVFTYSSLIHGLSQMGNLDGAQR 313
+ +SYN +I G R S++ + ++M++ + DVFTY+S++HG + + A+
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
V + MI R V+PD T M+NG + E+F + +EM Q G
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMD--RVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
L+ + K A+ LF+KM R+ R V ++N+LL+ F + A++ +A
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRI---RLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ + P +Y++L+ LC K +A + M ++P ++I + G+ +
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET-VFPNVVSYNV 262
++M G PD + YN +I GF + + KA + +++ E+ + P+V +YN
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ G R + E+ + +M + D TY+ +I+G NL A R++ +M+ R
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 323 VSPD 326
SPD
Sbjct: 723 FSPD 726
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD- 143
+++K Y + + + KM G P S+N+L+ F E +A +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 144 -TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
G+ P+V TYN ++ C++ + ++A+ +LR M G+ PD+ +Y +IN + +L
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 203 NAALEVFDEMSERGVEPD 220
A + DEM +RG PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 246/548 (44%), Gaps = 75/548 (13%)
Query: 7 PLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHI 66
PL P + ++K +K+P AL++F + G+ H+ + + V+ ++ +
Sbjct: 4 PLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 67 IGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
+ E N + E V + +K Y ++ EA+N+F +MD + C P V S+N++++
Sbjct: 64 VDMRENVGN-HMLEGVYVGAMKNYGRKGKVQEAVNVFERMD-FYDCEPTVFSYNAIMSVL 121
Query: 127 AVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK 186
S +++A K + G++P+V ++ + +K CK A LL MS G +
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 181
Query: 187 FSYGT-----------------------------------LINAAAKRGDLNAALEVFDE 211
+Y T L+ K+GD+ ++ D+
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
+ +RGV P++ YN+ I G + G+ A M L+ E+ P+V++YN +I GL +
Sbjct: 242 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI-EQGPKPDVITYNNLIYGLCKNS 300
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+F E+ +M + D +TY++LI G + G + A+R+ D + PD T
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 332 AMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
++++GLC G+ + L+ E +G+ NVI YN IKGL G + EA + + E
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN-EMSE 419
Query: 391 TALAVDSTTYGILIHGLCK------------------------------NGY-----LNK 415
L + T+ IL++GLCK +GY +
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
AL++L+ G D DV+ Y+S++N LCK + +D M ++GC N N L++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 476 GFIKNSNL 483
+ L
Sbjct: 540 SLCRYRKL 547
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 206/393 (52%), Gaps = 14/393 (3%)
Query: 108 RVFGC------RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVL 161
R+ GC +P V ++N+L+ + +++ AE + G+ P+ TYN LI
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 162 CKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
CK + A+ ++ G PD+F+Y +LI+ G+ N AL +F+E +G++P+V
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+ YN +I G G L+A ++ + E+ + P V ++N+++ GL + G S++ + +
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
M D+FT++ LIHG S ++ A + M+ V PDV T N++LNGLCK
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 342 KVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
K E+ E ++ M + G + N+ ++NI ++ L K++EA+ + E + ++ + D+ T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS-VNPDAVTF 569
Query: 401 GILIHGLCKNGYLNKALQV---LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
G LI G CKNG L+ A + +EEA Y+ +I+A ++ + A +
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP--TYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 458 MDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
M R + + ++DGF K N+ L +K L
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 39/433 (9%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
+K++ K S P AL L M GC V ++ +++ F + F +G
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
VS + T+N L++VLCKK + ++ + LL + G+ P+ F+Y I +RG+L+ A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
+ + E+G +PDV+ YN +I G K+ F +A E++ + E + P+ +YN +I G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
+ G + I N D FTY SLI GL G + A ++ + +G+ + P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG----------------------------- 357
V+ N ++ GL G + E+ +L EM + G
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 358 -------SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
++ ++NI I G K+E A+ I +++L + + D TY L++GLCK
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML-DNGVDPDVYTYNSLLNGLCKT 509
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC 470
++ + +G ++F ++ ++ +LC+ R+LD+A G++ M + +
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 471 NPLIDGFIKNSNL 483
LIDGF KN +L
Sbjct: 570 GTLIDGFCKNGDL 582
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 35/352 (9%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G +P V +N+L+ + A + G+ P V+T+N+L+ LCK A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
GL++ M G PD F++ LI+ + + + ALE+ D M + GV+PDV YN +++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K+ F E ++ ++ E+ PN+ ++N+++ L R + E+L + E MK
Sbjct: 506 LCKTSKFEDVMETYKTMV-EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D T+ +LI G + G+LDGA +++ K+EE++++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFR-------------------------KMEEAYKV- 598
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
S + +YNI I E V A +++ ++ + L D TY +++ G CK
Sbjct: 599 -------SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRLMVDGFCKT 650
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
G +N + L E G + +IN LC E R+ +AAG++ M ++G
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 9/293 (3%)
Query: 205 ALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL-REETVFPNVVS--Y 260
ALE+F+ M E G + + Y +I+ K G + K M E L+ E V +++ Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIE---KLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
++ R G+ E++ ++ERM + + VF+Y++++ L G D A +VY M
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEE 379
R ++PDV + + CK + + L M G NV++Y + G +E E
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
++ +L + +++ +T+ L+ LCK G + + ++L++ RG ++F Y+ I
Sbjct: 200 GYELFGKMLA-SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 440 NALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
LC+ LD A +V + ++G K + N LI G KNS LGK
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 4/165 (2%)
Query: 67 IGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
+G +E +N + + D TL+ + K D A LFRKM+ + ++N +++
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
AF AEK F + P+ TY +++ CK L M G P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
+ G +IN + A + M ++G+ P+ + N I D
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 233/478 (48%), Gaps = 10/478 (2%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHII 67
++P +L LL+ N ++++LF GY HS V Q ++ ++ ++ +I
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
+ + E + +++++ Y K P + L +M V+ C P +S+N +L
Sbjct: 136 QMKD--EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 193
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
+ A F + + P + T+ V++K C E + A LLR M+ G P+
Sbjct: 194 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
Y TLI++ +K +N AL++ +EM G PD +N +I G K +A +M R+
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
L P+ ++Y ++ GL + GR + +++ R+ K E + +++LIHG G
Sbjct: 314 LIRGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE----IVIFNTLIHGFVTHGR 368
Query: 308 LDGAQRVYKDMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYN 365
LD A+ V DM+ + PDV T N+++ G K G V + E+ +M G + NV SY
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I + G + GK++EA N+ + + L ++ + LI CK + +A+++ E
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+G DV+ ++S+I+ LC+ + A ++ M G NT N LI+ F++ +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 218/441 (49%), Gaps = 45/441 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + +K + +EAL L +M + GC P +FN ++ ++ A K
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEM-FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLR----------------------------- 175
G +P+ TY L+ LCK + AK L
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 176 ---WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
++ G+ PD +Y +LI K G + ALEV +M +G +P+V Y +++DGF
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 233 KSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K G K +E + L + + + PN V +N +I + R E++EI+ M + K
Sbjct: 436 KLG---KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
DV+T++SLI GL ++ + A + +DMI V + VT N ++N + G+++E+ +L
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
EM GS + I+YN IKGL G+V++A +++E +L + A + + ILI+GLC+
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCR 611
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+G + +A++ +E RG D+ ++S+IN LC+ R++D + + G +T
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 470 CNPLID-----GFIKNSNLTL 485
N L+ GF+ ++ L L
Sbjct: 672 FNTLMSWLCKGGFVYDACLLL 692
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 9/369 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + D+A + M +G P V ++NSL+ + A +
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PNV +Y +L+ CK + ++A +L MS GL+P+ + LI+A K +
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE---ETVFPNVVSYN 261
A+E+F EM +G +PDV +N +I G + + A +W LLR+ E V N V+YN
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA--LW--LLRDMISEGVVANTVTYN 533
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+I R G E+ ++ M D TY+SLI GL + G +D A+ +++ M+
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
+P ++CN ++NGLC+ G VEE+ E +EM GS +++++N I GL G++E+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ ++ L E + D+ T+ L+ LCK G++ A +L+E G + +S ++
Sbjct: 654 LTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 441 ALCKERRLD 449
++ + LD
Sbjct: 713 SIIPQETLD 721
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 211/407 (51%), Gaps = 11/407 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ KR D ALNL KM+ + V FN+++++ E A F +T
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAA-RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV TYN LI LC + A LL M + P+ ++ LI+A K G L
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++ +EM +R ++PD + YN++I+GF +A +M++ ++ ++ + PN+ +YN +I
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLI 405
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G +C R + +E++ M + + TY+++I G Q G+ D AQ V+K M+ RV
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
D++T + +L+GLC +GK++ + +++ + +S N+ YN I+G+ + GKV EA
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA--- 522
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
W+L ++ D TY +I GLC L +A + + + G + Y+++I A
Sbjct: 523 WDLFCS-LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 444 KERRLDDAAGVVSLMDKRG----CKLNTHVCNPLIDGFIKNSNLTLL 486
++ +A ++ M G + V N L DG + S L +L
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 41/424 (9%)
Query: 66 IIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
+I E Q S D+ + + +RS AL + KM ++ G P + + +SLL
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLL 160
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
N + S++ A G P+ T+ LI L + +A L+ M G +
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 184 PDKFSYGTLINAAAKRGDLNAAL-----------------------------------EV 208
PD +YGT++N KRGD++ AL ++
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 209 FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
F EM +G+ P+V+ YN +I+ G + A+ + +L E+ + PNVV++N +I
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML-EKKINPNVVTFNALIDAFF 339
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ G+ E+ ++ E M + D TY+ LI+G LD A++++K M+ + P++
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
T N ++NG CK +VE+ EL+ EM Q G N ++Y I+G F+ G + A +++ +
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ + D TY IL+HGLC G L+ AL + + + ++++F Y++MI +CK +
Sbjct: 460 VSN-RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 448 LDDA 451
+ +A
Sbjct: 519 VGEA 522
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 202/386 (52%), Gaps = 8/386 (2%)
Query: 97 DEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D+A++LF M R F P + FN LL+A A ++E T G+S ++ TY
Sbjct: 65 DDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
++ I C++ + A +L M +G PD + +L+N ++ A+ + D+M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +PD + +I G F +A + ++++ + P++V+Y ++ GL + G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
+L + +M+ K +V ++++I L + +++ A ++ +M + + P+VVT N+++
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 335 NGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
N LC +G+ ++ L M + + NV+++N I F+ GK+ EA + E ++ + ++
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI-QRSI 359
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
D+ TY +LI+G C + L++A Q+ + + ++ Y+++IN CK +R++D
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ M +RG NT +I GF +
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQ 445
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 37/267 (13%)
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
FP++V +N ++ +++ +F + + E+M+ HD++TYS I+ + L A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLF 372
V M+ PD+VT +++LNG C ++ ++ L ++M + G + + ++ I GLF
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE----------- 421
+ K EA+ + + ++ + D TYG +++GLCK G ++ AL +L
Sbjct: 200 LHNKASEAVALVDQMV-QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 422 ------------------------EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
E E +G +V Y+S+IN LC R DA+ ++S
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 458 MDKRGCKLNTHVCNPLIDGFIKNSNLT 484
M ++ N N LID F K L
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLV 345
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
LS + +D A ++ DM+ R P +V N +L+ + K K E L E+M G S +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ +Y+IFI ++ A+ + ++ + D T L++G C + ++ A+ ++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
++ G D F ++++I+ L + +A +V M +RGC+ + +++G K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 481 SNLTLLFKSLGK 492
++ L L K
Sbjct: 237 GDIDLALNLLNK 248
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 81 DVPLTLLKAYAKRSMPDEALNLFRKMDRVFG-CRPGVRSFNSLLNAFAVSEQWERAEKFF 139
D L + K K M LN+F + G C+ G V E W+
Sbjct: 485 DTALVIFKYLQKSEME---LNIFIYNTMIEGMCKAG-----------KVGEAWD------ 524
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
F + + P+V TYN +I LC KR ++A L R M G P+ +Y TLI A +
Sbjct: 525 -LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 200 GDLNAALEVFDEMSERGVEPDV----MCYNMIIDG 230
D A+ E+ EM G D + NM+ DG
Sbjct: 584 CDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 201/395 (50%), Gaps = 4/395 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL AK + D ++LF +M ++ G P + + N +++ +S Q RA F
Sbjct: 89 LLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T+ L+ C E A L + G+G +P+ +Y TLI K LN A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+E+F++M G P+V+ YN ++ G + G + A + +++ + PNV+++ +I
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR-IEPNVITFTALID 266
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G+ E+ E++ M + DVFTY SLI+GL G LD A++++ M P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+ V +++G CK +VE+ +++ EM Q G N I+Y + I+G G+ + A ++
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ A D TY +L+ GLC NG + KAL + E R D+++ Y+ +I +CK
Sbjct: 387 NQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+++DA + + +G K N +I GF +
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 191/373 (51%), Gaps = 10/373 (2%)
Query: 94 SMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT---AGVSPN 150
S P A KM ++ G P + +F SLLN + W R E A FD G PN
Sbjct: 132 SQPCRASCFLGKMMKL-GFEPDLVTFTSLLNGYC---HWNRIEDAIALFDQILGMGFKPN 187
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
V TY LI+ LCK R A L M G RP+ +Y L+ + G A +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
+M +R +EP+V+ + +ID F K G ++A E++ ++ + +V+P+V +Y +I GL
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMY 306
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
G E+ +++ M++N + Y++LIHG + ++ +++ +M + V + +T
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 331 NAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
++ G C G+ + + E++ +M + ++ +YN+ + GL NGKVE+A+ I+E +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE-YMR 425
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
+ + ++ TY I+I G+CK G + A + +G +V Y++MI+ C+ +
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 450 DAAGVVSLMDKRG 462
+A + M + G
Sbjct: 486 EADSLFKKMKEDG 498
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 174/390 (44%), Gaps = 43/390 (11%)
Query: 97 DEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
++AL+LF +M R P + F LL+ A +++ F G+ P + T
Sbjct: 65 NDALDLFTRMVHSRPL---PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N+++ +C + +A L M +G PD ++ +L+N + A+ +FD++
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +P NVV+Y +IR L + +
Sbjct: 182 MGFKP------------------------------------NVVTYTTLIRCLCKNRHLN 205
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
++E++ +M N + +V TY++L+ GL ++G A + +DM+ RR+ P+V+T A++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 335 NGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+ K GK+ E+ EL+ M Q S +V +Y I GL G ++EA ++ L+
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNGC 324
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
+ Y LIHG CK+ + +++ E +G + Y+ +I C R D A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
V + M R + N L+DG N +
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 140/295 (47%), Gaps = 5/295 (1%)
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
SY ++ N AL++F M P ++ + ++ K + ++E++
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+ + P + + N+++ + + + +M K + D+ T++SL++G
Sbjct: 110 -QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNI 366
++ A ++ ++G P+VVT ++ LCK + + EL+ +MG +GSR NV++YN
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 367 FIKGLFENGKVEEAMNIWELL-LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
+ GL E G+ +A W L + + + + T+ LI K G L +A ++
Sbjct: 229 LVTGLCEIGRWGDAA--WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
DVF Y S+IN LC LD+A + LM++ GC N + LI GF K+
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
SY ++R +F+++L+++ RM + + ++ L+ +++M D +++ M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGK-VEESFELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
+ P + TCN +++ +C + S L + M +++++ + G ++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
E+A+ +++ +LG + TY LI LCKN +LN A+++ + G +V Y++
Sbjct: 170 EDAIALFDQILG-MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
++ LC+ R DAA ++ M KR + N LID F+K L
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L++ Y PD A +F +M P +R++N LL+ + + E+A F Y
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ N+ TY ++I+ +CK + E A L + G++P+ +Y T+I+ +RG ++
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 205 ALEVFDEMSERGVEPD 220
A +F +M E G P+
Sbjct: 487 ADSLFKKMKEDGFLPN 502
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 212/410 (51%), Gaps = 7/410 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TLL EAL L +M + G +P + + N+L+N ++ + A
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN TY ++ V+CK + A LLR M ++ D Y +I+ K G L+
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +F+EM +G + D++ YN +I GF +G + ++ +++ + + PNVV+++V+I
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLI 340
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ E+ ++ + M + + TY+SLI G + L+ A ++ MI +
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNI 383
PD++T N ++NG CK ++++ EL+ EM G N ++YN ++G ++GK+E A +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ D +Y IL+ GLC NG L KAL++ + E ++D+ Y +I+ +C
Sbjct: 461 FQEMVSRRVRP-DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSL 490
++DDA + + +G KL+ N +I + +L+ +LF+ +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 207/389 (53%), Gaps = 6/389 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+A++LFR M + P V FN L +A A ++Q+E ++ G++ ++ T ++
Sbjct: 70 DDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+I C+ R+ A + + +G PD + TL+N ++ ALE+ D M E G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF-PNVVSYNVMIRGLSRCGRFSE 275
+P ++ N +++G +G A + +R++ ET F PN V+Y ++ + + G+ +
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV--ETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
++E+ +M++ K D YS +I GL + G+LD A ++ +M + D++T N ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 336 GLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
G C G+ ++ +L +M + S NV+++++ I + GK+ EA + + ++ + +A
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIA 365
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
++ TY LI G CK L +A+Q+++ +G D D+ ++ +IN CK R+DD +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 455 VSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
M RG NT N L+ GF ++ L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 189/380 (49%), Gaps = 8/380 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L K A+ L RKM+ + ++ +++ + A F +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G ++ TYN LI C ++ LLR M + P+ ++ LI++ K G L A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++ EM +RG+ P+ + YN +IDGF K +A +M + L+ + P+++++N++I
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD-LMISKGCDPDIMTFNILIN 411
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + R + LE++ M + TY++L+ G Q G L+ A++++++M+ RRV P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D+V+ +L+GLC G++E++ E++ ++ +S ++ Y I I G+ KV++A W
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA---W 528
Query: 385 ELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+L L + +D+ Y I+I LC+ L+KA + + G D Y+ +I A
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 443 CKERRLDDAAGVVSLMDKRG 462
+ AA ++ M G
Sbjct: 589 LGDDDATTAAELIEEMKSSG 608
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 180/358 (50%), Gaps = 4/358 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ K D A NLF +M+ + G + + ++N+L+ F + +W+ K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+SPNV T++VLI K+ + +A LL+ M G+ P+ +Y +LI+ K L A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+++ D M +G +PD+M +N++I+G+ K+ E++ R + V N V+YN +++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF-REMSLRGVIANTVTYNTLVQ 446
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + G+ + ++++ M + D+ +Y L+ GL G L+ A ++ + ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D+ +++G+C KV+++++L+ + G + + +YNI I L + +A +I
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA-DIL 565
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ E A D TY ILI + A +++EE + G DV +IN L
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 170/334 (50%), Gaps = 5/334 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + D+ L R M + P V +F+ L+++F + A++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++PN TYN LI CK+ E+A ++ M G PD ++ LIN K ++
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
LE+F EMS RGV + + YN ++ GF +SG A ++++ ++ V P++VSY +++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILL 480
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL G ++LEI+ +++K++ + D+ Y +IHG+ +D A ++ + + V
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
D N M++ LC+ + ++ L+ +M + G + + ++YNI I+ + A +
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
E + + D +T ++I+ L +G L+K+
Sbjct: 601 IE-EMKSSGFPADVSTVKMVINML-SSGELDKSF 632
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 210/410 (51%), Gaps = 7/410 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ EAL L +M + G +P + + N+L+N +S + A
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEM-GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN TY ++ V+CK + A LLR M ++ D Y +I+ K G L+
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +F+EM +G+ +++ YN++I GF +G + ++ +++ + + PNVV+++V+I
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLI 340
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ E+ E+ + M D TY+SLI G + +LD A ++ M+ +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P++ T N ++NG CK ++++ EL+ +M G + ++YN I+G E GK+ A +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + TY IL+ GLC NG KAL++ E+ E ++D+ Y+ +I+ +C
Sbjct: 461 FQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSL 490
++DDA + + +G K N +I G K L+ LLF+ +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 207/384 (53%), Gaps = 8/384 (2%)
Query: 97 DEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D+A++LFR M R P V F+ L +A A ++Q++ + G++ N+ T
Sbjct: 70 DDAIDLFRDMIHSRPL---PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
+++I C+ R+ A + + +G P+ ++ TLIN G ++ ALE+ D M E
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +PD++ N +++G SG +A + ++++ E PN V+Y ++ + + G+ +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
++E+ +M++ K D YS +I GL + G+LD A ++ +M + ++ +++T N ++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 335 NGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
G C G+ ++ +L +M + + NV+++++ I + GK+ EA + + ++ +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI-HRGI 364
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
A D+ TY LI G CK +L+KA Q+++ +G D ++ ++ +IN CK R+DD
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGF 477
+ M RG +T N LI GF
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGF 448
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 207/408 (50%), Gaps = 12/408 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L K A+ L RKM+ + ++ +++ + A F +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G++ N+ TYN+LI C ++ LLR M + P+ ++ LI++ K G L A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E+ EM RG+ PD + Y +IDGF K KAN+M + L+ + PN+ ++N++I
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTFNILIN 411
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + R + LE++ +M D TY++LI G ++G L+ A+ ++++M+ R+V P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
++VT +L+GLC G+ E++ E++E++ +S ++ YNI I G+ KV++A W
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA---W 528
Query: 385 ELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+L L + TY I+I GLCK G L++A + + E G D + Y+ +I A
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTH----VCNPLIDGFIKNSNLTLL 486
+ + ++ + + G ++ V + L DG +K S L +L
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
D A +++DMI R P V+ + + + + K + + L ++M G + N+ + +I
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
I K+ A + ++ + ++ T+ LI+GLC G +++AL++++ G
Sbjct: 130 INCFCRCRKLCLAFSAMGKII-KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLF 487
D+ ++++N LC + +A ++ M + GC+ N P+++ K+ L
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 488 KSLGK 492
+ L K
Sbjct: 249 ELLRK 253
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 251/524 (47%), Gaps = 52/524 (9%)
Query: 8 LSPHRLLNLLKSEK---NPHSALQLFQHATRHPGYTHS---SAVLQHVLRRVASDPTLLP 61
LSP+ + +LKS++ P A F + + YTH+ L VL +A D +
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLA-LAKDVDRIR 172
Query: 62 HAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNS 121
I E + + L+K++ K M +E L ++RKM + G P + ++N
Sbjct: 173 FVSSEIKKFEFPMTVSAAN----ALIKSFGKLGMVEELLWVWRKM-KENGIEPTLYTYNF 227
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
L+N + + AE+ F ++ + P++ TYN +IK CK + +KA LR M G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 182 LRPDKFSYGTLINAA-----------------------------------AKRGDLNAAL 206
DK +Y T+I A K G LN
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
VF+ M +G +P+V Y ++IDG+ KSG A + R++ +E P+VV+Y+V++ G
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI-DEGFKPDVVTYSVVVNG 406
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
L + GR E+L+ + + + + YSSLI GL + G +D A+R++++M + + D
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQS--GSRNVISYNIFIKGLFENGKVEEAMNIW 384
NA+++ K KV+E+ L++ M + + V +Y I + G+F+ + EEA+ +W
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW 526
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++++ + + + + L GLC +G + +A ++L+E G +D A MIN LCK
Sbjct: 527 DMMI-DKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCK 584
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
R+ +A + + +RG ++ + +I+ K L K
Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMK 628
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 5/295 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+E +F M R G +P V + L++ +A S E A + G P+V TY+V
Sbjct: 344 NEGYTVFENMIRK-GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
++ LCK E+A GL + Y +LI+ K G ++ A +F+EMSE+G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
D CYN +ID F K +A +++R+ EE V +Y +++ G+ + R E+
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
L++W+ M + +L GL G + A ++ ++ V D C M+N
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINT 581
Query: 337 LCKWGKVEESFELWEEMGQSGSRNVIS--YNIFIKGLFENGKVEEAMNIWELLLG 389
LCK G+++E+ +L + + + G R V + I L + GK + AM + +G
Sbjct: 582 LCKAGRIKEACKLADGITERG-REVPGRIRTVMINALRKVGKADLAMKLMHSKIG 635
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 216/446 (48%), Gaps = 50/446 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY---- 141
L+K + +L+ F K+ ++ G +P V +FN+LL+ + ++ A F Y
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 142 --------FDTA---GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
FD G++P V T+N LI LC + +A L+ M G GL D +YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
T++N K GD +AL + +M E ++PDV+ Y+ IID K G A ++ +L E
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML-E 324
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ + PNV +YN MI G GR+S++ + M + E DV T+++LI + G L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG----------------------------- 341
A+++ +M+ R + PD VT N+M+ G CK
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 342 --KVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
+V+E +L E+ + G N +YN I G E + A ++++ ++ + D+
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTI 503
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
T IL++G C+N L +AL++ E + D+D AY+ +I+ +CK ++D+A + +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNLT 484
G + + N +I GF S ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAIS 589
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 12/381 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ K ALNL KM+ +P V ++++++ A+ F+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++PNV TYN +I C + A+ LLR M + PD ++ LI+A+ K G L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++ DEM R + PD + YN +I GF K F A M++ + P+VV++N +I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTII 439
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R R E +++ + + + TY++LIHG ++ NL+ AQ ++++MI V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PD +TCN +L G C+ K+EE+ EL+E + S + ++YNI I G+ + KV+EA
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA--- 556
Query: 384 WELLLGETALAV--DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L V D TY ++I G C ++ A + + + G + D Y+++I
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 442 LCKERRLDDAAGVVSLMDKRG 462
K +D + ++S M G
Sbjct: 617 CLKAGEIDKSIELISEMRSNG 637
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 200/405 (49%), Gaps = 27/405 (6%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSF--NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D+A++ F M R RP + N ++ F + + A + + + N+ ++
Sbjct: 88 DDAIDFFDYMVR---SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL-------- 206
N+LIK C + + ++ +G +PD ++ TL++ ++ AL
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 207 -------EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
+FD+M E G+ P V+ +N +I+G G L+A + +++ + + +VV+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG-KGLHIDVVT 263
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y ++ G+ + G +L + +M++ K DV YS++I L + G+ AQ ++ +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ ++P+V T N M++G C +G+ ++ L +M + + +V+++N I + GK+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA + + +L D+ TY +I+G CK+ + A + + DV ++++
Sbjct: 384 EAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTI 438
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
I+ C+ +R+D+ ++ + +RG NT N LI GF + NL
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K + D+A ++F M P V +FN++++ + +++ + +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ N TYN LI C+ A+ L + M G+ PD + L+ + L
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNV 262
ALE+F+ + ++ D + YN+II G K K +E W+ L V P+V +YNV
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGS---KVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
MI G S++ ++ +MK N + D TY++LI G + G +D + + +M
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESF 347
S D T M+ L G++++SF
Sbjct: 638 FSGDAFTIK-MVADLITDGRLDKSF 661
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYN 365
+LD A + M+ R V CN ++ + + + + L+ +M + N+ S+N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC----------------K 409
I IK + K+ +++ + L + D T+ L+HGLC +
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKL-TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
G+L +A+ + ++ G V ++++IN LC E R+ +AA +V+ M +G ++
Sbjct: 205 TGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 470 CNPLIDGFIK----NSNLTLLFK 488
+++G K S L LL K
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSK 286
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 216/446 (48%), Gaps = 50/446 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY---- 141
L+K + +L+ F K+ ++ G +P V +FN+LL+ + ++ A F Y
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 142 --------FDTA---GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
FD G++P V T+N LI LC + +A L+ M G GL D +YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
T++N K GD +AL + +M E ++PDV+ Y+ IID K G A ++ +L E
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML-E 324
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ + PNV +YN MI G GR+S++ + M + E DV T+++LI + G L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG----------------------------- 341
A+++ +M+ R + PD VT N+M+ G CK
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 342 --KVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
+V+E +L E+ + G N +YN I G E + A ++++ ++ + D+
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTI 503
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
T IL++G C+N L +AL++ E + D+D AY+ +I+ +CK ++D+A + +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNLT 484
G + + N +I GF S ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAIS 589
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 12/381 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ K ALNL KM+ +P V ++++++ A+ F+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++PNV TYN +I C + A+ LLR M + PD ++ LI+A+ K G L
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++ DEM R + PD + YN +I GF K F A M++ + P+VV++N +I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTII 439
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R R E +++ + + + TY++LIHG ++ NL+ AQ ++++MI V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PD +TCN +L G C+ K+EE+ EL+E + S + ++YNI I G+ + KV+EA
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA--- 556
Query: 384 WELLLGETALAV--DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
W+L V D TY ++I G C ++ A + + + G + D Y+++I
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 442 LCKERRLDDAAGVVSLMDKRG 462
K +D + ++S M G
Sbjct: 617 CLKAGEIDKSIELISEMRSNG 637
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 200/405 (49%), Gaps = 27/405 (6%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSF--NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
D+A++ F M R RP + N ++ F + + A + + + N+ ++
Sbjct: 88 DDAIDFFDYMVR---SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL-------- 206
N+LIK C + + ++ +G +PD ++ TL++ ++ AL
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 207 -------EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
+FD+M E G+ P V+ +N +I+G G L+A + +++ + + +VV+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG-KGLHIDVVT 263
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y ++ G+ + G +L + +M++ K DV YS++I L + G+ AQ ++ +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ ++P+V T N M++G C +G+ ++ L +M + + +V+++N I + GK+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA + + +L D+ TY +I+G CK+ + A + + DV ++++
Sbjct: 384 EAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTI 438
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
I+ C+ +R+D+ ++ + +RG NT N LI GF + NL
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 10/257 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K + D+A ++F M P V +FN++++ + +++ + +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ N TYN LI C+ A+ L + M G+ PD + L+ + L
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNV 262
ALE+F+ + ++ D + YN+II G K K +E W+ L V P+V +YNV
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGS---KVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
MI G S++ ++ +MK N + D TY++LI G + G +D + + +M
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 323 VSPDVVTCNAMLNGLCK 339
S D T +C+
Sbjct: 638 FSGDAFTIKMAEEIICR 654
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSR 359
G +LD A + M+ R V CN ++ + + + + L+ +M +
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC----------- 408
N+ S+NI IK + K+ +++ + L + D T+ L+HGLC
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 409 -----KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
+ G+L +A+ + ++ G V ++++IN LC E R+ +AA +V+ M +G
Sbjct: 199 FGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 464 KLNTHVCNPLIDGFIK----NSNLTLLFK 488
++ +++G K S L LL K
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 216/464 (46%), Gaps = 51/464 (10%)
Query: 24 HSALQLFQHATRH---PGYTHSSAVLQHVLRRVASDPTL-LPHAPHIIGAIEAAQNCNCS 79
+ AL LF H P + +L + + D + L I+G CN
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN-- 111
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
L+ + + S P A + KM ++ G P + +F SL+N F + + E A
Sbjct: 112 -----LLMNCFCQSSQPYLASSFLGKMMKL-GFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
G+ P+V Y +I LCK A L M G+RPD Y +L+N
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR---------- 249
G A + M++R ++PDV+ +N +ID F K G FL A E++ ++R
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 250 ------------------------EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
+ FP+VV+Y +I G +C + ++++I+ M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+ TY++LI G Q+G + AQ V+ M+ R V P++ T N +L+ LC GKV++
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 346 SFELWEEMGQ----SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
+ ++E+M + + N+ +YN+ + GL NGK+E+A+ ++E + + + + TY
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE-DMRKREMDIGIITYT 464
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
I+I G+CK G + A+ + +G +V Y++MI+ L +E
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 169/325 (52%), Gaps = 8/325 (2%)
Query: 62 HAPHIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
H + + + +N DV + +L+ +A +L R M + +P V +F
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITF 250
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N+L++AF ++ AE+ + ++PN+ TY LI C + ++A+ + M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G PD +Y +LIN K ++ A+++F EMS++G+ + + Y +I GF + G
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH---DVFTYS 296
A E++ ++ V PN+ +YNV++ L G+ ++L I+E M+K E +++TY+
Sbjct: 371 AQEVFSHMV-SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
L+HGL G L+ A V++DM R + ++T ++ G+CK GKV+ + L+ +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 357 GSR-NVISYNIFIKGLFENGKVEEA 380
G + NV++Y I GLF G EA
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEA 514
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 188/399 (47%), Gaps = 7/399 (1%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
+AL+ R +D F R L N S Q+ A F + + P++ + L
Sbjct: 20 KALSFSRLLDLSFWVRAFCNYREILRNGLH-SLQFNEALDLFTHMVESRPLPSIIDFTKL 78
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+ V+ K ++F+ L + +G+ D ++ L+N + A +M + G
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
EPD++ + +I+GF +A M +++ E + P+VV Y +I L + G + +L
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++++M+ + DV Y+SL++GL G A + + M R++ PDV+T NA+++
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 338 CKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K GK ++ EL+ EM + S + N+ +Y I G G V+EA ++ L+ + D
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP-D 316
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
Y LI+G CK ++ A+++ E +G + Y+++I + + + A V S
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 457 LMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSLGK 492
M RG N N L+ N + ++F+ + K
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 143/274 (52%), Gaps = 3/274 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ A+ K +A L+ +M R+ P + ++ SL+N F + + A + F +T
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P+V Y LI CK ++ + A + MS GL + +Y TLI + G N A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET--VFPNVVSYNVM 263
EVF M RGV P++ YN+++ +G KA ++E + + E V PN+ +YNV+
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ GL G+ ++L ++E M+K E + TY+ +I G+ + G + A ++ + + V
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
P+VVT M++GL + G E+ L+ +M + G
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 210/401 (52%), Gaps = 4/401 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+K EA+ L +M GC+P V ++NS++N S A +
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V +V TY+ +I LC+ + A L + M G++ +Y +L+ K G N
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
+ +M R + P+V+ +N+++D F K G +ANE+++ ++ + PN+++YN ++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLM 340
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G R SE+ + + M +N+ D+ T++SLI G + +D +V++++ R +
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ VT + ++ G C+ GK++ + EL++EM G +V++Y I + GL +NGK+E+A+ I
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+E L ++ + + Y +I G+CK G + A + +G +V Y+ MI+ LC
Sbjct: 461 FE-DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
K+ L +A ++ M++ G N N LI +++ +LT
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 203/378 (53%), Gaps = 4/378 (1%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL+L RKM+ + V ++++++++ + A F +T G+ +V TYN L+
Sbjct: 212 ALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
+ LCK ++ LL+ M + P+ ++ L++ K G L A E++ EM RG+
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
P+++ YN ++DG+ +AN M + ++R + P++V++ +I+G R + ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-PDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ + K + TYS L+ G Q G + A+ ++++M+ V PDV+T +L+GLC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 339 KWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
GK+E++ E++E++ +S ++ Y I+G+ + GKVE+A N++ L + +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF-CSLPCKGVKPNV 508
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
TY ++I GLCK G L++A +L + E G + Y+++I A ++ L +A ++
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 458 MDKRGCKLNTHVCNPLID 475
M G + +ID
Sbjct: 569 MKSCGFSADASSIKMVID 586
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 212/458 (46%), Gaps = 72/458 (15%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+A+ LF++M R P + F+ +A A ++Q+ F + G++ N+ T N+
Sbjct: 70 DDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+I C+ + A +L + +G PD ++ TLI G ++ A+ + D M E G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+PDV+ YN I++G +SGD A ++ R + E V +V +Y+ +I L R G +
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLL-RKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ +++ M+ K V TY+SL+ GL + G + + KDM+ R + P+V+T N +L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 337 LCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL-------- 387
K GK++E+ EL++EM G S N+I+YN + G ++ EA N+ +L+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 388 --------------------------LGETALAVDSTTYGILIH---------------- 405
+ + L ++ TY IL+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 406 -------------------GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
GLC NG L KAL++ E+ + D+ + Y+++I +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 447 RLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
+++DA + + +G K N +I G K +L+
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL + K EA L+++M G P + ++N+L++ + + + A
Sbjct: 304 LLDVFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
SP++ T+ LIK C + + + R +S GL + +Y L+ + G + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E+F EM GV PDVM Y +++DG +G KA E++E L + + +V Y +I
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL-GIVMYTTIIE 481
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+ + G+ ++ ++ + K +V TY+ +I GL + G+L A + + M +P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+ T N ++ + G + S +L EEM G
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 130/255 (50%), Gaps = 6/255 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y ++ EA N+ M R C P + +F SL+ + + ++ + K F
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ N TY++L++ C+ + + A+ L + M G+ PD +YG L++ G L
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNV 262
ALE+F+++ + ++ ++ Y II+G K G K + W L + V PNV++Y V
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG---KVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
MI GL + G SE+ + +M+++ + TY++LI + G+L + ++ ++M
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 323 VSPDVVTCNAMLNGL 337
S D + +++ L
Sbjct: 574 FSADASSIKMVIDML 588
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 4/395 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L AK + D + L+ KM+ + G + SF L++ F + A
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENL-GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL 143
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T L+ C+ F++A L+ M G G P+ Y T+IN K DLN A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LEVF M ++G+ D + YN +I G SG + A + +++ + + PNV+ + +I
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALID 262
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G E+ +++ M + +VFTY+SLI+G G L A+ ++ M+ + P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
DVVT N ++ G CK +VE+ +L+ EM G + +YN I G + GK+ A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++ + ++ D TY IL+ LC NG + KAL ++E+ + DVD+ Y+ +I LC+
Sbjct: 383 NRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+L +A + + ++G K + +I G +
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 40/355 (11%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G RP + + SLLN F +++ A D G PNV YN +I LCK R+
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A + M G+R D +Y TLI+ + G A + +M +R ++P+V+ + +ID
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 230 GFFKSGDFLKANEMWERLLREETV----------------------------------FP 255
F K G+ L+A +++ ++R V FP
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+VV+YN +I G + R + ++++ M D FTY++LIHG Q G L+ AQ+V+
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
M+ VSPD+VT N +L+ LC GK+E++ + E++ +S ++I+YNI I+GL
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 375 GKVEEAMNIWELLLGETALAV--DSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
K++EA W L T V D+ Y +I GLC+ G +A ++ + G
Sbjct: 443 DKLKEA---WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 202/400 (50%), Gaps = 7/400 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+A +LF +M + P + F +L A +++ + + G+S ++ ++ +
Sbjct: 61 DDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI C+ A LL M +G RP + G+L+N + A+ + D M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
P+V+ YN +I+G K+ D A E++ + ++ + + V+YN +I GLS GR++++
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ M K + +V +++LI + GNL A+ +YK+MI R V P+V T N+++NG
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 337 LCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
C G + ++ +++ M G +V++YN I G ++ +VE+ M ++ + L
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF-CEMTYQGLVG 357
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D+ TY LIHG C+ G LN A +V G D+ Y+ +++ LC +++ A +V
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSLGK 492
+ K ++ N +I G + L LF+SL +
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 7/254 (2%)
Query: 104 RKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCK 163
RK+D P V F +L++ F A + V PNV TYN LI C
Sbjct: 248 RKID------PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 164 KREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMC 223
AK + M G PD +Y TLI K + +++F EM+ +G+ D
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN +I G+ ++G A +++ R++ + V P++V+YN+++ L G+ ++L + E +
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
+K+E D+ TY+ +I GL + L A +++ + + V PD + M++GLC+ G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 344 EESFELWEEMGQSG 357
E+ +L M + G
Sbjct: 481 READKLCRRMKEDG 494
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K ++ + LF +M G ++N+L++ + + + A+K F
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GVSP++ TYN+L+ LC + EKA ++ + + D +Y +I + L
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +F ++ +GV+PD + Y +I G + G +A+++ R ++E+ P+ Y+ +
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR-MKEDGFMPSERIYDETL 506
Query: 265 R 265
R
Sbjct: 507 R 507
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 189/346 (54%), Gaps = 8/346 (2%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL+LFRKM+ + V ++ ++++ ++ A F + G+ +V TY+ LI
Sbjct: 229 ALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
LC +++ +LR M G + PD ++ LI+ K G L A E+++EM RG+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD + YN +IDGF K +AN+M++ L+ + P++V+Y+++I + R + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFD-LMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ + + TY++L+ G Q G L+ A+ ++++M+ R V P VVT +L+GLC
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 339 KWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAV 395
G++ ++ E++E+M +S + + YNI I G+ KV++A W L L + +
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA---WSLFCSLSDKGVKP 523
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
D TY ++I GLCK G L++A + + + G D F Y+ +I A
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 204/419 (48%), Gaps = 39/419 (9%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G P +F++L+N F + + A P++ T + LI LC K +
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A L+ M G +PD+ +YG ++N K G+ AL++F +M ER ++ V+ Y+++ID
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 230 GFFKSGDFLKA----NEM------------------------WE---RLLRE---ETVFP 255
K G F A NEM W+ ++LRE + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+VV+++ +I + G+ E+ E++ M D TY+SLI G + L A +++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
M+ + PD+VT + ++N CK +V++ L+ E+ G N I+YN + G ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
GK+ A +++ ++ + TYGIL+ GLC NG LNKAL++ E+ + + +
Sbjct: 434 GKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSL 490
Y+ +I+ +C ++DDA + + +G K + N +I G K +L+ +LF+ +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 199/400 (49%), Gaps = 4/400 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + EAL L +M +G +P ++ +LN S A F +
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ +V Y+++I LCK F+ A L M G++ D +Y +LI G +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
++ EM R + PDV+ ++ +ID F K G L+A E++ ++ + P+ ++YN +I
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLI 357
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + E+ ++++ M + D+ TYS LI+ + +D R+++++ + +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P+ +T N ++ G C+ GK+ + EL++EM G +V++Y I + GL +NG++ +A+ I
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+E + ++ + + Y I+IHG+C ++ A + +G DV Y+ MI LC
Sbjct: 478 FE-KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
K+ L +A + M + GC + N LI + S L
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 39/423 (9%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
++A++LF M + P FN L +A A ++Q++ F + G+ ++ T +
Sbjct: 52 NDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY--------------------------- 189
+I C+K++ A +L +G PD ++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 190 --------GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
TLIN +G ++ AL + D M E G +PD + Y +++ KSG+ A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
+++ R + E + +VV Y+++I L + G F ++L ++ M+ K DV TYSSLI G
Sbjct: 231 DLF-RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
L G D ++ ++MIGR + PDVVT +A+++ K GK+ E+ EL+ EM G + +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
I+YN I G + + EA +++L++ + D TY ILI+ CK ++ +++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
E +G + Y++++ C+ +L+ A + M RG + L+DG N
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 481 SNL 483
L
Sbjct: 469 GEL 471
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + K EA L+ +M G P ++NSL++ F A + F +
Sbjct: 321 LIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ TY++LI CK + + L R +S GL P+ +Y TL+ + G LNAA
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E+F EM RGV P V+ Y +++DG +G+ KA E++E++ + + YN++I
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL-GIGIYNIIIH 498
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+ + ++ ++ + K DV TY+ +I GL + G+L A +++ M +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
D T N ++ + S EL EEM G
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 39/256 (15%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ + K + EA +F M GC P + +++ L+N++ +++ + + F +
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PN TYN L+ C+ + AK L + M G+ P +YG L++ G+LN
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 205 ALEVFDEM-----------------------------------SERGVEPDVMCYNMIID 229
ALE+F++M S++GV+PDV+ YN++I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG-LSRCGRFSESLEIWERMKKNER 288
G K G +A+ ++ R ++E+ P+ +YN++IR L G S S+E+ E MK
Sbjct: 534 GLCKKGSLSEADMLF-RKMKEDGCTPDDFTYNILIRAHLGGSGLIS-SVELIEEMKVCGF 591
Query: 289 KHDVFTYSSLIHGLSQ 304
D T +I LS
Sbjct: 592 SADSSTIKMVIDMLSD 607
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 227/455 (49%), Gaps = 25/455 (5%)
Query: 49 VLRRVASDPTLLPHAPHII------GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNL 102
V +V D LL A + G + + +CN V LT L ++ A+ +
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN----VYLTRLSKDCYKTAT--AIIV 233
Query: 103 FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC 162
FR+ V C V S+N +++ + + A + G +P+V +Y+ ++ C
Sbjct: 234 FREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 163 KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
+ E +K L+ M GL+P+ + YG++I + L A E F EM +G+ PD +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER 282
Y +IDGF K GD A++ + + + P+V++Y +I G + G E+ +++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
M + D T++ LI+G + G++ A RV+ MI SP+VVT +++GLCK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 343 VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGE---TALAVDST 398
++ + EL EM + G + N+ +YN + GL ++G +EEA+ L+GE L D+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK----LVGEFEAAGLNADTV 527
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
TY L+ CK+G ++KA ++L+E +G + ++ ++N C L+D +++ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNL---TLLFKSL 490
+G N N L+ + +NL T ++K +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 189/374 (50%), Gaps = 3/374 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V S+++++N + + ++ K G+ PN Y +I +LC+ + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ M G+ PD Y TLI+ KRGD+ AA + F EM R + PDV+ Y II G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F + GD ++A +++ + + + P+ V++ +I G + G ++ + M +
Sbjct: 396 FCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+V TY++LI GL + G+LD A + +M + P++ T N+++NGLCK G +EE+ +L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
E +G + + ++Y + ++G++++A I + +LG+ L T+ +L++G C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+G L ++L +G + ++S++ C L A + M RG +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 470 CNPLIDGFIKNSNL 483
L+ G K N+
Sbjct: 634 YENLVKGHCKARNM 647
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 177/370 (47%), Gaps = 12/370 (3%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA F +M R G P + +L++ F A KFF + ++P+V TY +
Sbjct: 334 EAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I C+ + +A L M GL PD ++ LIN K G + A V + M + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANE----MWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
P+V+ Y +IDG K GD ANE MW+ L+ PN+ +YN ++ GL + G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-----PNIFTYNSIVNGLCKSGNI 507
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
E++++ + D TY++L+ + G +D AQ + K+M+G+ + P +VT N +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 334 LNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+NG C G +E+ +L M G + N ++N +K ++ A I++ +
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-G 626
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+ D TY L+ G CK + +A + +E + +G V V YS +I K ++ +A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 453 GVVSLMDKRG 462
V M + G
Sbjct: 687 EVFDQMRREG 696
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 4/304 (1%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA LF +M G P +F L+N + + + A + + AG SPNV TY L
Sbjct: 404 EAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I LCK+ + + A LL M +GL+P+ F+Y +++N K G++ A+++ E G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
D + Y ++D + KSG+ KA E+ + +L + + P +V++NV++ G G +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++ M + T++SL+ NL A +YKDM R V PD T ++ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 338 CKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
CK ++E++ L++EM G+ S +V +Y++ IKG + K EA +++ + E LA D
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE-GLAAD 700
Query: 397 STTY 400
+
Sbjct: 701 KEIF 704
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 18/379 (4%)
Query: 128 VSEQWER-----AEKFFAYFDTA-------GVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+S WER + F +FD G P V ++V +VL +A+ +
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFE 199
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNA-ALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
M GL S + +K A A+ VF E E GV +V YN++I +
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 259
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G +A+ + L+ + P+V+SY+ ++ G R G + ++ E MK+ K + +
Sbjct: 260 GRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM- 353
Y S+I L ++ L A+ + +MI + + PD V +++G CK G + + + + EM
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 354 GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+ + +V++Y I G + G + EA ++ + + L DS T+ LI+G CK G++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
A +V G +V Y+++I+ LCKE LD A ++ M K G + N N +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 474 IDGFIKNSNLTLLFKSLGK 492
++G K+ N+ K +G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGE 516
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 81/209 (38%), Gaps = 37/209 (17%)
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
+ A ++G EAA N TL+ AY K D+A + ++M G +P + +F
Sbjct: 507 IEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTF 564
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC----------------- 162
N L+N F + E EK + G++PN T+N L+K C
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 163 ------------------KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
K R ++A L + M G G +Y LI KR
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
A EVFD+M G+ D ++ D +K
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYK 713
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 227/455 (49%), Gaps = 25/455 (5%)
Query: 49 VLRRVASDPTLLPHAPHII------GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNL 102
V +V D LL A + G + + +CN V LT L ++ A+ +
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN----VYLTRLSKDCYKTAT--AIIV 233
Query: 103 FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC 162
FR+ V C V S+N +++ + + A + G +P+V +Y+ ++ C
Sbjct: 234 FREFPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 163 KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
+ E +K L+ M GL+P+ + YG++I + L A E F EM +G+ PD +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER 282
Y +IDGF K GD A++ + + + P+V++Y +I G + G E+ +++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
M + D T++ LI+G + G++ A RV+ MI SP+VVT +++GLCK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 343 VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGE---TALAVDST 398
++ + EL EM + G + N+ +YN + GL ++G +EEA+ L+GE L D+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK----LVGEFEAAGLNADTV 527
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
TY L+ CK+G ++KA ++L+E +G + ++ ++N C L+D +++ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNL---TLLFKSL 490
+G N N L+ + +NL T ++K +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 189/374 (50%), Gaps = 3/374 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V S+++++N + + ++ K G+ PN Y +I +LC+ + +A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ M G+ PD Y TLI+ KRGD+ AA + F EM R + PDV+ Y II G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F + GD ++A +++ + + + P+ V++ +I G + G ++ + M +
Sbjct: 396 FCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+V TY++LI GL + G+LD A + +M + P++ T N+++NGLCK G +EE+ +L
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
E +G + + ++Y + ++G++++A I + +LG+ L T+ +L++G C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+G L ++L +G + ++S++ C L A + M RG +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 470 CNPLIDGFIKNSNL 483
L+ G K N+
Sbjct: 634 YENLVKGHCKARNM 647
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 177/370 (47%), Gaps = 12/370 (3%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA F +M R G P + +L++ F A KFF + ++P+V TY +
Sbjct: 334 EAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I C+ + +A L M GL PD ++ LIN K G + A V + M + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANE----MWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
P+V+ Y +IDG K GD ANE MW+ L+ PN+ +YN ++ GL + G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-----PNIFTYNSIVNGLCKSGNI 507
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
E++++ + D TY++L+ + G +D AQ + K+M+G+ + P +VT N +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 334 LNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+NG C G +E+ +L M G + N ++N +K ++ A I++ +
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-G 626
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+ D TY L+ G CK + +A + +E + +G V V YS +I K ++ +A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 453 GVVSLMDKRG 462
V M + G
Sbjct: 687 EVFDQMRREG 696
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 4/304 (1%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA LF +M G P +F L+N + + + A + + AG SPNV TY L
Sbjct: 404 EAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I LCK+ + + A LL M +GL+P+ F+Y +++N K G++ A+++ E G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
D + Y ++D + KSG+ KA E+ + +L + + P +V++NV++ G G +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++ M + T++SL+ NL A +YKDM R V PD T ++ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 338 CKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
CK ++E++ L++EM G+ S +V +Y++ IKG + K EA +++ + E LA D
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE-GLAAD 700
Query: 397 STTY 400
+
Sbjct: 701 KEIF 704
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 18/379 (4%)
Query: 128 VSEQWER-----AEKFFAYFDTA-------GVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+S WER + F +FD G P V ++V +VL +A+ +
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFE 199
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNA-ALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
M GL S + +K A A+ VF E E GV +V YN++I +
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 259
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G +A+ + L+ + P+V+SY+ ++ G R G + ++ E MK+ K + +
Sbjct: 260 GRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM- 353
Y S+I L ++ L A+ + +MI + + PD V +++G CK G + + + + EM
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 354 GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+ + +V++Y I G + G + EA ++ + + L DS T+ LI+G CK G++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
A +V G +V Y+++I+ LCKE LD A ++ M K G + N N +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 474 IDGFIKNSNLTLLFKSLGK 492
++G K+ N+ K +G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGE 516
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 81/209 (38%), Gaps = 37/209 (17%)
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
+ A ++G EAA N TL+ AY K D+A + ++M G +P + +F
Sbjct: 507 IEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTF 564
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC----------------- 162
N L+N F + E EK + G++PN T+N L+K C
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 163 ------------------KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
K R ++A L + M G G +Y LI KR
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
A EVFD+M G+ D ++ D +K
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYK 713
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 231/479 (48%), Gaps = 17/479 (3%)
Query: 16 LLKSEKNPHSALQLFQHATRHPGYTHSS---AVLQHVL---------RRVASDPTLLPHA 63
L++ +++P A + F+ + G+ HS ++ H+L V + L
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 64 PHIIGAIEAAQN-CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
+ + + +N C V L M +EA+ F KM R F P RS N L
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKR-FRVFPKTRSCNGL 233
Query: 123 LNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
L+ FA + + ++FF AG P V TYN++I +CK+ + E A+GL M GL
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
PD +Y ++I+ K G L+ + F+EM + EPDV+ YN +I+ F K G E
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ R ++ + PNVVSY+ ++ + G ++++ + M++ + +TY+SLI
Sbjct: 354 FY-REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNV 361
++GNL A R+ +M+ V +VVT A+++GLC +++E+ EL+ +M +G N+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
SYN I G + ++ A+ + L G + D YG I GLC + A V+
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
E + G + Y+++++A K + ++ M + ++ LIDG KN
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 193/379 (50%), Gaps = 13/379 (3%)
Query: 112 CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
C PG F++L + E A + F+ V P + N L+ K + + K
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
+ M G G RP F+Y +I+ K GD+ AA +F+EM RG+ PD + YN +IDGF
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
K G +E + ++ P+V++YN +I + G+ LE + MK N K +
Sbjct: 308 GKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS--PDVVTCNAMLNGLCKWGKVEESFEL 349
V +YS+L+ + G + A + Y DM RRV P+ T ++++ CK G + ++F L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDM--RRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLG--ETALAVDS-TTYGILIH 405
EM Q G NV++Y I GL + +++EA E L G +TA + + +Y LIH
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEA----EELFGKMDTAGVIPNLASYNALIH 480
Query: 406 GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKL 465
G K +++AL++L E + RG D+ Y + I LC +++ A V++ M + G K
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 466 NTHVCNPLIDGFIKNSNLT 484
N+ + L+D + K+ N T
Sbjct: 541 NSLIYTTLMDAYFKSGNPT 559
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 5/400 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ K + A LF +M + G P ++NS+++ F + + FF
Sbjct: 268 MIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
P+V TYN LI CK + R M G GL+P+ SY TL++A K G + A
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++ + +M G+ P+ Y +ID K G+ A + +L + V NVV+Y +I
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML-QVGVEWNVVTYTALID 445
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GL R E+ E++ +M ++ +Y++LIHG + N+D A + ++ GR + P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D++ + GLC K+E + + EM + G + N + Y + F++G E +++
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG-DVDVFAYSSMINALC 443
+ + E + V T+ +LI GLCKN ++KA+ + G + +++MI+ LC
Sbjct: 566 DEM-KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
K+ +++ A + M ++G + L+DG K N+
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 194/394 (49%), Gaps = 3/394 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K D+ + F +M + C P V ++N+L+N F + +F+
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV +Y+ L+ CK+ ++A M VGL P++++Y +LI+A K G+L+
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + +EM + GVE +V+ Y +IDG + +A E++ ++ V PN+ SYN +I
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALI 479
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + +LE+ +K K D+ Y + I GL + ++ A+ V +M +
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ + +++ K G E L +EM + V+++ + I GL +N V +A++
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + + L ++ + +I GLCK+ + A + E+ +G D AY+S+++
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
K+ + +A + M + G KL+ L+ G
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 11/348 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ A+ K M +A+ + M RV G P ++ SL++A A +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV NV TY LI LC ++A+ L M G+ P+ SY LI+ K +++
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
ALE+ +E+ RG++PD++ Y I G S + ++A ++ ++E + N + Y ++
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLC-SLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ----MGNLDGAQRVYKDMIG 320
+ G +E L + + MK+ + + V T+ LI GL + +D R+ D G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND-FG 608
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEE 379
+ + + T AM++GLCK +VE + L+E+M Q G + +Y + G F+ G V E
Sbjct: 609 LQANAAIFT--AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
A+ + + + E + +D Y L+ GL L KA LEE G
Sbjct: 667 ALALRDKM-AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 38/288 (13%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA LF KMD G P + S+N+L++ F ++ +RA + G+ P++ Y
Sbjct: 455 EAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I LC + E AK ++ M G++ + Y TL++A K G+ L + DEM E +
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 218 EPDVMCYNMIIDGFFK--------------SGDF-LKAN--------------------- 241
E V+ + ++IDG K S DF L+AN
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
++E+++++ V P+ +Y ++ G + G E+L + ++M + K D+ Y+SL+ G
Sbjct: 634 TLFEQMVQKGLV-PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
LS L A+ ++MIG + PD V C ++L + G ++E+ EL
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 2/235 (0%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P ++ + L G E+++ + +MK+ + + L+H +++G D +R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
+KDMIG P V T N M++ +CK G VE + L+EEM G + ++YN I G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
G++++ + +E + + D TY LI+ CK G L L+ E + G +V
Sbjct: 310 VGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+YS++++A CKE + A M + G N + LID K NL+ F+
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF-D 143
TL+ AY K P E L+L +M + V +F L++ ++ +A +F +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKEL-DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ N + +I LCK + E A L M GL PD+ +Y +L++ K+G++
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 204 AALEVFDEMSE-----------------------------------RGVEPD-VMCYNMI 227
AL + D+M+E G+ PD V+C + +
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS-V 724
Query: 228 IDGFFKSGDFLKANEMWERLLREE 251
+ ++ G +A E+ L++ +
Sbjct: 725 LKKHYELGCIDEAVELQSYLMKHQ 748
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 208/410 (50%), Gaps = 7/410 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ EAL L +M + G +P + + N+L+N ++ + A
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PN TY ++KV+CK + A LLR M ++ D Y +I+ K G L+
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +F+EM +G + D++ Y +I GF +G + ++ +++ + + P+VV+++ +I
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALI 324
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ E+ E+ + M + D TY+SLI G + LD A + M+ +
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNI 383
P++ T N ++NG CK +++ EL+ +M G + ++YN I+G E GK+E A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ D +Y IL+ GLC NG KAL++ E+ E ++D+ Y+ +I+ +C
Sbjct: 445 FQEMVSRRVRP-DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSL 490
++DDA + + +G K + N +I G K +L+ LLF+ +
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 204/408 (50%), Gaps = 12/408 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+LK K A+ L RKM+ V+ ++ +++ + A F +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G ++ Y LI+ C ++ LLR M + PD ++ LI+ K G L A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E+ EM +RG+ PD + Y +IDGF K KAN M + L+ + PN+ ++N++I
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD-LMVSKGCGPNIRTFNILIN 395
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + + LE++ +M D TY++LI G ++G L+ A+ ++++M+ RRV P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D+V+ +L+GLC G+ E++ E++E++ +S ++ YNI I G+ KV++A W
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA---W 512
Query: 385 ELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+L L + D TY I+I GLCK G L++A + + E G + Y+ +I A
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTH----VCNPLIDGFIKNSNLTLL 486
E +A ++ + + G ++ V + L DG +K S L +L
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 202/383 (52%), Gaps = 6/383 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+A++LF++M R RP + F+ L + A ++Q++ + G++ N+ T ++
Sbjct: 54 DDAVDLFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+I C+ R+ A + + +G PD ++ TLIN G ++ ALE+ D M E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF-PNVVSYNVMIRGLSRCGRFSE 275
+P ++ N +++G +G A + +R++ ET F PN V+Y +++ + + G+ +
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
++E+ +M++ + K D YS +I GL + G+LD A ++ +M + D++ ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 336 GLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
G C G+ ++ +L +M + + +V++++ I + GK+ EA + + ++ + ++
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI-QRGIS 349
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
D+ TY LI G CK L+KA +L+ +G ++ ++ +IN CK +DD +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 455 VSLMDKRGCKLNTHVCNPLIDGF 477
M RG +T N LI GF
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGF 432
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 176/334 (52%), Gaps = 5/334 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL++ + D+ L R M + P V +F++L++ F + AE+
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+SP+ TY LI CK+ + +KA +L M G P+ ++ LIN K ++
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
LE+F +MS RGV D + YN +I GF + G A E+++ ++ V P++VSY +++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILL 464
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL G ++LEI+E+++K++ + D+ Y+ +IHG+ +D A ++ + + V
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PDV T N M+ GLCK G + E+ L+ +M + G S N +YNI I+ G ++ +
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
E + +VD++T +++ L +G L K+
Sbjct: 585 IE-EIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 179/366 (48%), Gaps = 3/366 (0%)
Query: 115 GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL 174
G S+ L + V + + A F + P + ++ L V+ + ++++ L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
+ M G+ + ++ +IN + L+ A ++ + G EPD + ++ +I+G
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G +A E+ +R++ E P +++ N ++ GL G+ S+++ + +RM + + + T
Sbjct: 156 GRVSEALELVDRMV-EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
Y ++ + + G A + + M R++ D V + +++GLCK G ++ +F L+ EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
G + ++I Y I+G G+ ++ + ++ + + D + LI K G L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-KRKITPDVVAFSALIDCFVKEGKL 333
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
+A ++ +E RG D Y+S+I+ CKE +LD A ++ LM +GC N N L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 474 IDGFIK 479
I+G+ K
Sbjct: 394 INGYCK 399
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 197/379 (51%), Gaps = 7/379 (1%)
Query: 98 EALNLFR-KMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+AL+ R M+R G R G+ S N +L +V +Q E A + + G +PNV T+
Sbjct: 235 KALDFHRLVMER--GFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI CK+ E ++A L + M G+ PD +Y TLI+ K G L ++F + +G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
V+ DV+ ++ ID + KSGD A+ +++R+L + + PNVV+Y ++I+GL + GR E+
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
++ ++ K + + TYSSLI G + GNL +Y+DMI PDVV +++G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 337 LCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
L K G + + +M GQS NV+ +N I G + +EA+ ++ L+G +
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKP 529
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D T+ ++ G L +AL + G + D AY ++I+A CK + +
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 456 SLMDKRGCKLNTHVCNPLI 474
LM + + VCN +I
Sbjct: 590 DLMQRNKISADIAVCNVVI 608
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
R V FNSL++ + +++ A K F G+ P+V T+ +++V + E+A
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
L M +GL PD +Y TLI+A K L++FD M + D+ N++I F
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 233 KSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
K A++ + L+ E + P++V+YN MI G R E+ I+E +K +
Sbjct: 613 KCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
T + LIH L + ++DGA R++ M + P+ VT +++ K +E SF+L+EE
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 353 MGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNG 411
M + G S +++SY+I I GL + G+V+EA NI+ + + L D Y ILI G CK G
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVG 790
Query: 412 YLNKALQVLEEAEHRG 427
L +A + E G
Sbjct: 791 RLVEAALLYEHMLRNG 806
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 197/405 (48%), Gaps = 4/405 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y K M LF + G + V F+S ++ + S A +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+SPNV TY +LIK LC+ +A G+ + G+ P +Y +LI+ K G+L +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
++++M + G PDV+ Y +++DG K G L A ++L +++ NVV +N +I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML-GQSIRLNVVVFNSLI 503
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G R RF E+L+++ M K DV T+++++ G L+ A ++ M +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
PD + +++ CK K +L++ M ++ S ++ N+ I LF+ ++E+A
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ L+ E + D TY +I G C L++A ++ E + + + +I+ LC
Sbjct: 624 FNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
K +D A + S+M ++G K N L+D F K+ ++ FK
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 243/514 (47%), Gaps = 45/514 (8%)
Query: 14 LNLLKSEKNPHSALQLFQHAT---RHPG-YTHSSAVLQHVLRRVASD--PTLLPHAPHII 67
L LL E P+SAL+ F+ A + P YT + ++++ + VA ++ +
Sbjct: 74 LVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLF----------------RKMDRVFG 111
+ + ++ + DV L++ + M D+AL +F R ++ + G
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 112 --------------CR-----PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVE 152
CR GV + +L+A + +A F G +
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 153 TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM 212
+ N ++K L + E A LL + G P+ ++ TLIN KRG+++ A ++F M
Sbjct: 254 SCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
+RG+EPD++ Y+ +IDG+FK+G ++++ + L + V +VV ++ I + G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL-HKGVKLDVVVFSSTIDVYVKSGD 371
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNA 332
+ + +++RM +V TY+ LI GL Q G + A +Y ++ R + P +VT ++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 333 MLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+++G CK G + F L+E+M + G +V+ Y + + GL + G + AM +LG++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
+ ++ + LI G C+ ++AL+V G DV +++++ E RL++A
Sbjct: 492 -IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
+ M K G + + LID F K+ T+
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ A+ K P L LF M R + N +++ + E A KFF
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ P++ TYN +I C R ++A+ + + P+ + LI+ K D++
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ +F M+E+G +P+ + Y ++D F KS D + +++E + +E+ + P++VSY+++I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIII 748
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL + GR E+ I+ + + DV Y+ LI G ++G L A +Y+ M+ V
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 325 PD 326
PD
Sbjct: 809 PD 810
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 59/396 (14%)
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
F D++ N++ + +L + E A RW G P S+ T+ + +
Sbjct: 55 FNLLDSSVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIR 111
Query: 199 RGDLNAALEVFDEM--------------SERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
G + A +VFDEM +R ++ DV +++ + G KA E++
Sbjct: 112 NGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIF 169
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLS 303
+ V P Y M+ L R + ++++ + V + ++ L
Sbjct: 170 VYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALF 228
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVI 362
G + A ++ ++ R +V+CN +L GL ++E + L + G + NV+
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVV 287
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ I G + G+++ A ++++++ + + D Y LI G K G L ++ +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVM-EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 423 AEHRGGDVDVFAYSS-----------------------------------MINALCKERR 447
A H+G +DV +SS +I LC++ R
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ +A G+ + KRG + + + LIDGF K NL
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 177/320 (55%), Gaps = 7/320 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V +N+L++ + + A + + G+ +V TYN L+ LC + A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+LR M + PD ++ LI+ K+G+L+ A E++ EM + V+P+ + YN II+G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
G A + ++ L+ + FPNVV+YN +I G + E +++++RM
Sbjct: 291 LCMHGRLYDAKKTFD-LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D+FTY++LIHG Q+G L A ++ M+ RRV+PD++T +L+GLC G++E + +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGL 407
++M +S +++YNI I GL + KVE+A WEL L + D+ TY I+I GL
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKA---WELFCRLPVEGVKPDARTYTIMILGL 466
Query: 408 CKNGYLNKALQVLEEAEHRG 427
CKNG +A +++ + G
Sbjct: 467 CKNGPRREADELIRRMKEEG 486
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 198/396 (50%), Gaps = 4/396 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A A + + +KM+ ++G + SF L++ F + A
Sbjct: 77 LLTATANLRRYETVIYFSQKME-LYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL 135
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T+ L+ C A L+ M G P+ Y TLI+ K G+LN A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LE+ +EM ++G+ DV+ YN ++ G SG + A M +++ ++ P+VV++ +I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTALID 254
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G E+ E+++ M ++ + TY+S+I+GL G L A++ + M + P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT N +++G CK+ V+E +L++ M G + ++ +YN I G + GK+ A++I+
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++ + D T+ IL+HGLC NG + AL ++ + + AY+ MI+ LCK
Sbjct: 375 CWMVSRR-VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+++ A + + G K + +I G KN
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 170/341 (49%), Gaps = 3/341 (0%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
L F S ++E A F + P++ + L+ R +E + M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ D +S+ LI+ + L+ AL V +M + G EP ++ + ++ GF A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
+ L+ + PNVV YN +I GL + G + +LE+ M+K DV TY++L+ G
Sbjct: 162 SLV-ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
L G A R+ +DM+ R ++PDVVT A+++ K G ++E+ EL++EM QS N
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
++YN I GL +G++ +A ++L+ + + TY LI G CK +++ +++
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP-NVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
+ G + D+F Y+++I+ C+ +L A + M R
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
GF S F A ++ ++ + + P++V + ++ + R+ + ++M+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPL-PSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
HD+++++ LIH + L A V M+ P +VT ++L+G C ++ ++F L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
M +SG NV+ YN LI GLC
Sbjct: 164 VILMVKSGYEPNVVVYNT------------------------------------LIDGLC 187
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
KNG LN AL++L E E +G DV Y++++ LC R DAA ++ M KR +
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 469 VCNPLIDGFIKNSNL 483
LID F+K NL
Sbjct: 248 TFTALIDVFVKQGNL 262
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K M DE + LF++M G + ++N+L++ + + A F + +
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMS-CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V+P++ T+ +L+ LC E E A M +Y +I+ K +
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
A E+F + GV+PD Y ++I G K+G +A+E+ R+ E +
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D ++ ILIH C+ L+ AL VL + G + + + S+++ C R+ DA +V
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
LM K G + N V N LIDG KN L + + L +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 237/457 (51%), Gaps = 33/457 (7%)
Query: 27 LQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTL 86
L++F + R Y S +L+ ++R+ + P +I C++ L
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRK--------GYNPDVIL---------CTK-----L 130
Query: 87 LKAY-AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+K + R++P +A+ + +++ FG +P V ++N+L+N F + + A + +
Sbjct: 131 IKGFFTLRNIP-KAVRVMEILEK-FG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
SP+ TYN++I LC + + + A +L + +P +Y LI A G ++ A
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L++ DEM RG++PD+ YN II G K G +A EM R L + P+V+SYN+++R
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV-RNLELKGCEPDVISYNILLR 306
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L G++ E ++ +M + +V TYS LI L + G ++ A + K M + ++P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIW 384
D + + ++ C+ G+++ + E E M G ++++YN + L +NGK ++A+ I+
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
LGE + +S++Y + L +G +AL ++ E G D D Y+SMI+ LC+
Sbjct: 427 G-KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVC--NPLIDGFIK 479
E +D+A + L+D R C+ + V N ++ GF K
Sbjct: 486 EGMVDEAFEL--LVDMRSCEFHPSVVTYNIVLLGFCK 520
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+++ K M D A + R ++ + GC P V S+N LL A +WE EK +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
PNV TY++LI LC+ + E+A LL+ M GL PD +SY LI A + G L+
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+E + M G PD++ YN ++ K+G +A E++ + L E PN SYN M
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMF 445
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
L G +L + M N D TY+S+I L + G +D A + DM
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P VVT N +L G CK ++E++ + E M +G R N +Y + I+G+ G EAM +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 163/332 (49%), Gaps = 4/332 (1%)
Query: 162 CKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
C+ + ++ LL M G PD LI ++ A+ V E+ E+ +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
YN +I+GF K A + +R+ R + P+ V+YN+MI L G+ +L++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
++ + + V TY+ LI G +D A ++ +M+ R + PD+ T N ++ G+CK G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 342 KVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
V+ +FE+ + G +VISYNI ++ L GK EE + + E + TY
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTY 336
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
ILI LC++G + +A+ +L+ + +G D ++Y +I A C+E RLD A + M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 461 RGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
GC + N ++ KN + GK
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 181/350 (51%), Gaps = 8/350 (2%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVF--GCRPGVRSFNSLLNAFAVSE 130
+ NC + L++A DEAL L MD + G +P + ++N+++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKL---MDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 131 QWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
+RA + + G P+V +YN+L++ L + ++E+ + L+ M P+ +Y
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
LI + G + A+ + M E+G+ PD Y+ +I F + G A E E ++
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI-S 396
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ P++V+YN ++ L + G+ ++LEI+ ++ + + +Y+++ L G+
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIK 369
A + +M+ + PD +T N+M++ LC+ G V+E+FEL +M +V++YNI +
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
G + ++E+A+N+ E ++G + TTY +LI G+ GY +A+++
Sbjct: 517 GFCKAHRIEDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L K D+AL +F K+ V GC P S+N++ +A S RA +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+ TYN +I LC++ ++A LL M P +Y ++ K +
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
A+ V + M G P+ Y ++I+G +G +A E+ L+R + +
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 225/466 (48%), Gaps = 13/466 (2%)
Query: 17 LKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNC 76
L+ E AL F+ + H+ + ++R++A D + +++ ++ Q
Sbjct: 50 LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV-DSVQYLLQQMKL-QGF 107
Query: 77 NCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
+CSED+ ++++ Y + + + A+ +F ++ FGC P V+ +N +L+ + +
Sbjct: 108 HCSEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENRIQMIY 166
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
+ G PNV TYNVL+K LCK + + AK LL MS G PD SY T+I++
Sbjct: 167 MVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
+ G + E++ER EP V YN +I+G K D+ A E+ ++ E+ + PN
Sbjct: 227 CEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMV-EKGISPN 280
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
V+SY+ +I L G+ + +M K +++T SSL+ G G A ++
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 317 DMI-GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
MI G + P+VV N ++ G C G + ++ ++ M + G S N+ +Y I G +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
G ++ A+ IW +L + + Y ++ LC++ +A ++E V
Sbjct: 401 GSLDGAVYIWNKML-TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRG-CKLNTHVCNPLIDGFIK 479
+++ I LC RLD A V M+++ C N N L+DG K
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK 505
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 169/383 (44%), Gaps = 41/383 (10%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A L R+M G P V S+++L+N S Q E A F G PN+ T + L+
Sbjct: 265 AFELMREMVEK-GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 159 K-VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
K + F+ + + G GL+P+ +Y TL+ G++ A+ VF M E G
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
P++ Y +I+GF K G A +W ++L PNVV Y M+ L R +F E+
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC-PNVVVYTNMVEALCRHSKFKEAE 442
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR-RVSPDVVTCNAMLNG 336
+ E M K V T+++ I GL G LD A++V++ M + R P++VT N +L+G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 337 LCKWGKVEESFELWEEMGQSG------------------------------------SRN 360
L K ++EE++ L E+ G S +
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELL-LGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
I+ N+ I + GK E A + +L+ G D +Y +I GLC++ + +
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 420 LEEAEHRGGDVDVFAYSSMINAL 442
LE G + +S +IN
Sbjct: 623 LERMISAGIVPSIATWSVLINCF 645
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 70 IEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
IE NC+ VP +K D A +FR+M++ C P + ++N LL+ A
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
+ + E A GV + TYN L+ C A L+ M G PD+
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMS--ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+ +I A K+G A ++ D +S R PDV+ Y +I G +S + E
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 246 RLLREETVFPNVVSYNVMI 264
R++ V P++ +++V+I
Sbjct: 625 RMISAGIV-PSIATWSVLI 642
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 7/236 (2%)
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+++ VMIR L+ G+ + ++MK + S+I Q+G + A ++
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGK 376
+ P V N +L+ L +++ + ++ +M + G NV +YN+ +K L +N K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
V+ A + + + D+ +Y +I +C+ G + + ++ E E V Y+
Sbjct: 197 VDGAKKLL-VEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-----VSVYN 250
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
++IN LCKE A ++ M ++G N + LI+ + + L F L +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 207/399 (51%), Gaps = 4/399 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + + EA+ L +M V GC+P + ++ +++N + + A +
Sbjct: 175 TLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ +V Y+ +I LCK R + A L M G+RPD F+Y +LI+ G +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + +M ER + P+V+ +N +ID F K G ++A ++++ ++ + ++ PN+V+YN +I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI-QRSIDPNIVTYNSLI 352
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G R E+ +I+ M + DV TY++LI+G + + +++DM R +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ VT +++G + + + ++++M G N+++YN + GL +NGK+E+AM +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+E L ++ + D TY I+ G+CK G + + +G DV AY++MI+ C
Sbjct: 473 FE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
K+ ++A + M + G ++ N LI +++ +
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 209/425 (49%), Gaps = 43/425 (10%)
Query: 97 DEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
DEA++LF +M R F P + F+ LL+A A ++++ F + GVS N+ TY
Sbjct: 47 DEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N++I LC++ + A +L M +G P + +L+N ++ A+ + D+M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +PD + + ++ G F+ +A + ER++ + P++V+Y +I GL + G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPD 222
Query: 275 ESLEIWERMKKN-----------------ERKH------------------DVFTYSSLI 299
+L + +M+K + +H DVFTYSSLI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGS 358
L G A R+ DM+ R+++P+VVT N++++ K GK+ E+ +L++EM Q S
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
N+++YN I G + +++EA I+ L++ + L D TY LI+G CK + ++
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGME 401
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
+ + RG + Y+++I+ + D+A V M G N N L+DG
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 479 KNSNL 483
KN L
Sbjct: 462 KNGKL 466
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 41/373 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDR------------VFGC-------------------- 112
T++ + K D+ALNLF +MD + C
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 113 --RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
P V +FNSL++AFA + AEK F + PN+ TYN LI C ++A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + M PD +Y TLIN K + +E+F +MS RG+ + + Y +I G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
FF++ D A ++++++ + V PN+++YN ++ GL + G+ +++ ++E ++K++ +
Sbjct: 425 FFQASDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D++TY+ + G+ + G ++ ++ + + V PDV+ N M++G CK G EE++ L+
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENG-KVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+M + G + +YN I+ +G K A I E + A D++TYG L+ +
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE--MRSCRFAGDASTYG-LVTDML 600
Query: 409 KNGYLNKA-LQVL 420
+G L+K L+VL
Sbjct: 601 HDGRLDKGFLEVL 613
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNI 366
LD A ++ +M+ R P +V + +L+ + K K + E+M G S N+ +YNI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I L ++ A+ I ++ + T L++G C +++A+ ++++
Sbjct: 106 MINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLL 486
G D ++++++ L + + +A +V M +GC+ + +I+G K L
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 487 FKSLGK 492
L K
Sbjct: 225 LNLLNK 230
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 218/435 (50%), Gaps = 39/435 (8%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LLK + +A++L R+M R P V S+N+++ F ++ E+A + +
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G S ++ T+ +LI CK + ++A G L+ M +GL D Y +LI G+L+
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE-------------------- 245
+FDE+ ERG P + YN +I GF K G +A+E++E
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 246 --------------RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
L+ E+ PN V+YN++I L + G ++++EI E MKK + D
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMI--GRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
TY+ L+ GL G+LD A ++ M+ PDV++ NA+++GLCK ++ ++ ++
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 350 WEEMGQS-GSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
++ + + G+ + ++ NI + + G V +AM +W+ + ++ + +S TY +I G C
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK-QISDSKIVRNSDTYTAMIDGFC 505
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
K G LN A +L + VF Y+ ++++LCKE LD A + M + +
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 469 VCNPLIDGFIKNSNL 483
N +IDG +K ++
Sbjct: 566 SFNIMIDGSLKAGDI 580
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 188/372 (50%), Gaps = 3/372 (0%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
V + N LL + + +A + P+V +YN +I+ C+ +E EKA L
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
M G G ++G LI+A K G ++ A+ EM G+E D++ Y +I GF G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
+ + +++ +L E P ++YN +IRG + G+ E+ EI+E M + + +V+TY
Sbjct: 262 ELDRGKALFDEVL-ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ LI GL +G A ++ MI + P+ VT N ++N LCK G V ++ E+ E M +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 356 SGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA-VDSTTYGILIHGLCKNGYL 413
+R + I+YNI + GL G ++EA + L+L +++ D +Y LIHGLCK L
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
++AL + + + G D + ++N+ K ++ A + + N+ +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 474 IDGFIKNSNLTL 485
IDGF K L +
Sbjct: 501 IDGFCKTGMLNV 512
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
S + LL + + A A G + NV +N+L+K LC+ E KA LLR M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
L PD FSY T+I + +L ALE+ +EM G ++ + ++ID F K+G
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+A + ++ + ++V Y +IRG CG +++ + + TY++
Sbjct: 229 DEAMGFLKE-MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
LI G ++G L A +++ MI R V P+V T +++GLC GK +E+ +L M +
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 358 SR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
N ++YNI I L ++G V +A+ I E L+ + D+ TY IL+ GLC G L++A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 417 --LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
L L + D DV +Y+++I+ LCKE RL A + L+
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 193/409 (47%), Gaps = 50/409 (12%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P ++N+L+ F Q + A + F + GV PNV TY LI LC + ++A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
LL M P+ +Y +IN K G + A+E+ + M +R PD + YN+++ G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 231 FFKSGDFLKANEMWERLLREETVF-PNVVSYNVMIRGLSR-------------------- 269
GD +A+++ +L++ + P+V+SYN +I GL +
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 270 ---------------CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
G ++++E+W+++ ++ + TY+++I G + G L+ A+ +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFE 373
M + P V N +L+ LCK G +++++ L+EEM + + +V+S+NI I G +
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 374 NGKVEEAMNIWELLLG--ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
G ++ A + LL+G L+ D TY LI+ K GYL++A+ ++ G + D
Sbjct: 577 AGDIKSAES---LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 432 VFAYSSMINALCKERRLDDAAGVV-SLMDKR-------GCKLNTHVCNP 472
S++ + D +V L+DK C + ++CN
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 182/367 (49%), Gaps = 5/367 (1%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N+L+ S E A F+ N + + L++ + R+ A G+L M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G + +++ L+ + + A+ + EM + PDV YN +I GF + + K
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A E+ ++ ++V++ ++I + G+ E++ + MK + D+ Y+SLI
Sbjct: 196 ALELANE-MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
G G LD + ++ +++ R SP +T N ++ G CK G+++E+ E++E M + G R
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 360 -NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
NV +Y I GL GK +EA+ + L++ E ++ TY I+I+ LCK+G + A++
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMI-EKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC--NPLIDG 476
++E + R D Y+ ++ LC + LD+A+ ++ LM K + V N LI G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 477 FIKNSNL 483
K + L
Sbjct: 434 LCKENRL 440
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ K + +AL+++ + G V + N LLN+ + +A + + +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDS 488
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ N +TY +I CK AKGLL M L+P F Y L+++ K G L+ A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+F+EM PDV+ +N++IDG K+GD + S ++
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD--------------------IKSAESLLV 588
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+SR G D+FTYS LI+ ++G LD A + M+ P
Sbjct: 589 GMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM 353
D C+++L G+ ++ EL +++
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P +S + L++ L E H AL ++ G V + + TL A
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG------DRVTTNILLNSTL--KAG 473
Query: 65 HIIGAIEAAQNCNCSE-----DVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
+ A+E + + S+ D ++ + K M + A L KM RV +P V +
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDY 532
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N LL++ ++A + F P+V ++N++I K + + A+ LL MS
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
GL PD F+Y LIN K G L+ A+ FD+M + G EPD + ++ G+ K
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Query: 240 ANEMWERLLREETVFPNVVSYNVM 263
E+ ++L+ ++ V ++ VM
Sbjct: 653 LTELVKKLVDKDIVLDKELTCTVM 676
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 204/421 (48%), Gaps = 39/421 (9%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A+ LF M V G RP V + ++ + + RA++ A+ + G N+ YNVLI
Sbjct: 211 AMELFNDMVSV-GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM------ 212
LCKK++ +A G+ + ++G L+PD +Y TL+ K + LE+ DEM
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 213 -----------------------------SERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
+ GV P++ YN +ID K F +A +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
++R + + + PN V+Y+++I R G+ +L M K V+ Y+SLI+G
Sbjct: 390 FDR-MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVI 362
+ G++ A+ +MI +++ P VVT +++ G C GK+ ++ L+ EM G+ + ++
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ + GLF G + +A+ ++ + E + + TY ++I G C+ G ++KA + L+E
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFN-EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+G D ++Y +I+ LC + +A V + K C+LN L+ GF +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 483 L 483
L
Sbjct: 628 L 628
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 5/385 (1%)
Query: 106 MDRVFGCR--PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCK 163
MD + R P + +SL+ + E A GVSPN+ YN LI LCK
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 164 KREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMC 223
R+F +A+ L M +GLRP+ +Y LI+ +RG L+ AL EM + G++ V
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN +I+G K GD A ++ ++ + P VV+Y ++ G G+ +++L ++ M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
++T+++L+ GL + G + A +++ +M V P+ VT N M+ G C+ G +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 344 EESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI 402
++FE +EM + G + SY I GL G+ EA ++ L + ++ Y
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTG 617
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
L+HG C+ G L +AL V +E RG D+D+ Y +I+ K + G++ M RG
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 463 CKLNTHVCNPLIDGFIKNSNLTLLF 487
K + + +ID K + F
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAF 702
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 200/402 (49%), Gaps = 4/402 (0%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
SE +L++ KR +EALNL +++ FG P + +N+L+++ ++ AE
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
F G+ PN TY++LI + C++ + + A L M GL+ + Y +LIN K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
GD++AA EM + +EP V+ Y ++ G+ G KA ++ + + + P++
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE-MTGKGIAPSIY 508
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
++ ++ GL R G ++++++ M + K + TY+ +I G + G++ A K+M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKV 377
+ + PD + +++GLC G+ E+ + + + N I Y + G GK+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
EEA+++ + ++ + + +D YG+LI G K+ +L+E RG D Y+S
Sbjct: 629 EEALSVCQEMV-QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
MI+A K +A G+ LM GC N +I+G K
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 196/401 (48%), Gaps = 8/401 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + +R D AL+ +M G + V +NSL+N AE F A
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ P V TY L+ C K + KA L M+G G+ P +++ TL++ + G + A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+++F+EM+E V+P+ + YN++I+G+ + GD KA E + + E+ + P+ SY +I
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE-MTEKGIVPDTYSYRPLIH 585
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GL G+ SE+ + + K + + Y+ L+HG + G L+ A V ++M+ R V
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D+V +++G K + F L +EM G + + + Y I + G +EA IW
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+L++ E + + TY +I+GLCK G++N+A + + + + Y ++ L K
Sbjct: 706 DLMINEGCVP-NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 445 ERRLDDAAGVVSLMDK--RGCKLNTHVCNPLIDGFIKNSNL 483
D V L + +G NT N LI GF + +
Sbjct: 765 GEV--DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 195/419 (46%), Gaps = 49/419 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ Y + ++AL L+ +M G P + +F +LL+ + A K F
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA------- 197
V PN TYNV+I+ C++ + KA L+ M+ G+ PD +SY LI+
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 198 ----------------------------KRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
+ G L AL V EM +RGV+ D++CY ++ID
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 230 GFFKSGD----FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
G K D F EM +R L+ P+ V Y MI S+ G F E+ IW+ M
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLK-----PDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV-- 343
+ TY+++I+GL + G ++ A+ + M P+ VT L+ L K G+V
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDM 769
Query: 344 EESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
+++ EL + + N +YN+ I+G G++EEA + ++G+ ++ D TY +
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTM 828
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
I+ LC+ + KA+++ +G D AY+++I+ C + A + + M ++G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 138/274 (50%), Gaps = 10/274 (3%)
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
++++I + +S L +++ ++ + ++ P V + + ++ GL + F ++E++ M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
+ DV+ Y+ +I L ++ +L A+ + M ++V N +++GLCK KV
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 344 EESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL----GETALAVDST 398
E+ + +++ G+ +V++Y + GL + + E + + + +L + AV S
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS- 337
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
L+ GL K G + +AL +++ G ++F Y+++I++LCK R+ +A + M
Sbjct: 338 ----LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
K G + N + LID F + L LG+
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ N TYN+LI+ C++ E+A L+ M G G+ PD +Y T+IN +R D+ A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
+E+++ M+E+G+ PD + YN +I G +G+ KA E+ +LR+ + PN
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI-PN 891
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
++N L+ F + E A + GVSP+ TY +I LC++ + +KA L M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPD 220
+ G+RPD+ +Y TLI+ G++ A E+ +EM +G+ P+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 200/398 (50%), Gaps = 7/398 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L++ + M DEA+ F M G P + N +L + + E A F+A
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEK-GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM 219
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ NV T+N++I VLCK+ + +KAKG L M G++P +Y TL+ + RG + A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ EM +G +PD+ YN I+ G +A+E+ R ++E + P+ VSYN++IR
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVL-REMKEIGLVPDSVSYNILIR 335
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G S G + + M K +TY++LIHGL ++ A+ + +++ + +
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIW 384
D VT N ++NG C+ G +++F L +EM G + +Y I L K EA ++
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
E ++G+ + D L+ G C G +++A +L+E + + D Y+ ++ LC
Sbjct: 456 EKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
E + ++A ++ M +RG K + N LI G+ K +
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 75/367 (20%)
Query: 103 FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC 162
F + VFG +P + ++N+L+ F++ + E A + + G P+++TYN ++ +C
Sbjct: 247 FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC 306
Query: 163 KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
+ +A +LR M +GL PD SY LI + GDL A DEM ++G+ P
Sbjct: 307 NE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY 363
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER 282
YN +I G F ++A E+ R +RE+ + + V+YN++I G + G ++ + +
Sbjct: 364 TYNTLIHGLFMENK-IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 283 MKKNERKHDVFTYSSLIHGLSQ-----------------------------------MGN 307
M + + FTY+SLI+ L + +GN
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-------- 359
+D A + K+M ++PD VT N ++ GLC GK EE+ EL EM + G +
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 360 ----------------------------NVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+++YN +KGL +N + E A + + E
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 392 ALAVDST 398
+ DS+
Sbjct: 603 IVPNDSS 609
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 6/338 (1%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
+++L++ C+ R ++A M G P + ++ ++ + A + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
++ +V +N++I+ K G KA ++ + P +V+YN +++G S GR
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG-IMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
+ I MK + D+ TY+ + LS M N A V ++M + PD V+ N +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPI---LSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 334 LNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ G G +E +F +EM + G +YN I GLF K+E A I + E
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA-EILIREIREKG 392
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+ +DS TY ILI+G C++G KA + +E G F Y+S+I LC++ + +A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
+ + +G K + + N L+DG N+ F L
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ +++ EA LF K+ G +P + N+L++ +RA D
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
++P+ TYN L++ LC + +FE+A+ L+ M G++PD SY TLI+ +K+GD
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 555
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE---ETVFPNVVSYN 261
A V DEM G P ++ YN ++ G K+ + E+ E LLRE E + PN S+
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGLSKN----QEGELAEELLREMKSEGIVPNDSSFC 611
Query: 262 VMIRGLS 268
+I +S
Sbjct: 612 SVIEAMS 618
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 13/231 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y + +A L +M G +P ++ SL+ + A++ F
Sbjct: 403 LINGYCQHGDAKKAFALHDEM-MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ N L+ C ++A LL+ M + + PD +Y L+ G A
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGD----FLKANEMWERLLREETVFPNVVSYN 261
E+ EM RG++PD + YN +I G+ K GD F+ +EM P +++YN
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN-----PTLLTYN 576
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
+++GLS+ + E+ MK + ++ S+I +S NLD +
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS---NLDAKK 624
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 32/259 (12%)
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+ + +++++R + E++E + MK+ T + ++ LS++ ++ A Y
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFEN 374
DM + +V T N M+N LCK GK++++ M G + +++YN ++G
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 375 GKVEEA---------------MNIWELLLG----------------ETALAVDSTTYGIL 403
G++E A M + +L E L DS +Y IL
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
I G NG L A +E +G + Y+++I+ L E +++ A ++ + ++G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 464 KLNTHVCNPLIDGFIKNSN 482
L++ N LI+G+ ++ +
Sbjct: 394 VLDSVTYNILINGYCQHGD 412
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 209/428 (48%), Gaps = 10/428 (2%)
Query: 62 HAPH-IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
H H I AI N + + L+ AYA S + F++ +G + S
Sbjct: 134 HQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKR-SGYYGYKLSALSCK 192
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
L+ A + E + + PNV T+NV+I LCK + KA+ ++ M
Sbjct: 193 PLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 181 GLRPDKFSYGTLINAAAK---RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G P+ SY TLI+ K G + A V EM E V P++ +N++IDGF+K +
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+ ++++ +L ++ V PNV+SYN +I GL G+ SE++ + ++M + ++ TY++
Sbjct: 313 PGSMKVFKEML-DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
LI+G + L A ++ + G+ P N +++ CK GK+++ F L EEM + G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 358 -SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
+V +YN I GL NG +E A +++ L + D T+ IL+ G C+ G KA
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKA 489
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK-RGCKLNTHVCNPLID 475
+L+E G Y+ ++ CKE L A + + M+K R ++N N L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 476 GFIKNSNL 483
G+ + L
Sbjct: 550 GYSQKGKL 557
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 183/347 (52%), Gaps = 7/347 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAV---SEQWERAEKFFAY 141
++ A K ++A ++ M +V+GC P V S+N+L++ + + + +A+
Sbjct: 228 VVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
VSPN+ T+N+LI K + + + M ++P+ SY +LIN G
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
++ A+ + D+M GV+P+++ YN +I+GF K+ +A +M+ + + + P YN
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYN 405
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++I + G+ + + E M++ DV TY+ LI GL + GN++ A++++ D +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTS 464
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
+ PD+VT + ++ G C+ G+ ++ L +EM + G + ++YNI +KG + G ++ A
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
N+ + E L ++ +Y +L+ G + G L A +L E +G
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 7/303 (2%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + +FN L++ F + + K F V PNV +YN LI LC + +A +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M G++P+ +Y LIN K L AL++F + +G P YNM+ID + K
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G + E + RE V P+V +YN +I GL R G + ++++++ ++ D+
Sbjct: 414 LGKIDDGFALKEEMEREGIV-PDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGLPDLV 471
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
T+ L+ G + G A + K+M + P +T N ++ G CK G ++ + + +M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 354 GQSG--SRNVISYNIFIKGLFENGKVEEA-MNIWELLLGETALAVDSTTYGILIHGLCKN 410
+ NV SYN+ ++G + GK+E+A M + E+L E L + TY I+ +
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML--EKGLVPNRITYEIVKEEMVDQ 589
Query: 411 GYL 413
G++
Sbjct: 590 GFV 592
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 5/260 (1%)
Query: 228 IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
+DGF ++G + + ++ + + V N + ++++ + RF E ++R
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYG 183
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
K + L+ L + + VYK+MI R++ P+V T N ++N LCK GK+ ++
Sbjct: 184 YKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 348 ELWEEMGQSG-SRNVISYNIFIKG---LFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
++ E+M G S NV+SYN I G L NGK+ +A + + ++ E ++ + TT+ IL
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNIL 302
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
I G K+ L +++V +E + +V +Y+S+IN LC ++ +A + M G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 464 KLNTHVCNPLIDGFIKNSNL 483
+ N N LI+GF KN L
Sbjct: 363 QPNLITYNALINGFCKNDML 382
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 127/233 (54%), Gaps = 4/233 (1%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA+++ KM G +P + ++N+L+N F ++ + A F G P YN+L
Sbjct: 349 EAISMRDKMVSA-GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
I CK + + L M G+ PD +Y LI + G++ AA ++FD+++ +G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
PD++ ++++++G+ + G+ KA M + + + + P ++YN++++G + G +
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKA-AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 278 EIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
+ +M+K R + +V +Y+ L+ G SQ G L+ A + +M+ + + P+ +T
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 214/453 (47%), Gaps = 54/453 (11%)
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
G + C C L+ AYAK M ++A+ F +M + F CRP V ++N +L
Sbjct: 121 GGVSVDSYCFC------VLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILRVMM 173
Query: 128 VSEQWERAEKFFAYFD---TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
E + FA ++ SPN+ T+ +L+ L KK A+ + M+G G+ P
Sbjct: 174 REEVFFMLA--FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
++ +Y LI+ +RG + A ++F EM G PD + +N ++DGF K G ++A E+
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
RL ++ + Y+ +I GL R R++++ E++ M K K D+ Y+ LI GLS+
Sbjct: 292 -RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVIS 363
G ++ A ++ M + +SPD NA++ LC G +EE L EM ++ S + +
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
+ I I + NG V EA I+ + ++ + T+ LI GLCK+G L +A +L +
Sbjct: 411 HTILICSMCRNGLVREAEEIFT-EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 424 E---------------------------------------HRGGDVDVFAYSSMINALCK 444
E G D+ +Y+ +IN C+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCR 529
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+D A +++++ +G ++ N LI+G
Sbjct: 530 AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 43/357 (12%)
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY-- 189
W+ E+ + GVS + + VLI K EKA M RPD F+Y
Sbjct: 112 WQTLEEL----KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNV 167
Query: 190 ----------------------------------GTLINAAAKRGDLNAALEVFDEMSER 215
G L++ K+G + A ++FD+M+ R
Sbjct: 168 ILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
G+ P+ + Y ++I G + G A +++ ++ +P+ V++N ++ G + GR E
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYE-MQTSGNYPDSVAHNALLDGFCKLGRMVE 286
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
+ E+ +K+ + YSSLI GL + A +Y +M+ + + PD++ ++
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346
Query: 336 GLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
GL K GK+E++ +L M G S + YN IK L G +EE ++ +L + ET
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL-QLEMSETESF 405
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
D+ T+ ILI +C+NG + +A ++ E E G V ++++I+ LCK L +A
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 39/340 (11%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD-FLK 239
G+ D + + LI+A AK G A+E F M E PDV YN+I+ + F+
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A ++ +L+ PN+ ++ +++ GL + GR S++ ++++ M + TY+ LI
Sbjct: 182 AFAVYNEMLKCNCS-PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-S 358
GL Q G+ D A++++ +M PD V NA+L+G CK G++ E+FEL + G
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
+ Y+ I GLF + +A ++ +L + + D Y ILI GL K G + AL+
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKN-IKPDIILYTILIQGLSKAGKIEDALK 359
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLD----------------------------- 449
+L +G D + Y+++I ALC L+
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 450 ------DAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+A + + ++K GC + N LIDG K+ L
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 14/378 (3%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
+P + + L+ + + + E A K + + G+SP+ YN +IK LC + E+ +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
L MS PD ++ LI + + G + A E+F E+ + G P V +N +IDG
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
Query: 233 KSGDFLKANEMWERLL--REETVFPNVV-----SYNVMIRGLSRCGRFSESLEIWERMKK 285
KSG+ +A + ++ R ++F + S++ M+ G ++
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES----GSILKAYRDLAHFAD 510
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
D+ +Y+ LI+G + G++DGA ++ + + +SPD VT N ++NGL + G+ EE
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 346 SFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
+F+L+ + Y + KV A N+W L + + D T I
Sbjct: 571 AFKLFYAKDDFRHSPAV-YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE--IE 627
Query: 406 GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKL 465
K G +AL+ L E + R ++ + Y+ + LC+ R +A V S++ ++ +
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 466 NTHVCNPLIDGFIKNSNL 483
C LI G K L
Sbjct: 688 TPPSCVKLIHGLCKREQL 705
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 124/240 (51%), Gaps = 5/240 (2%)
Query: 244 WERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH- 300
W+ L L+ V + + V+I ++ G +++E + RMK+ + + DVFTY+ ++
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSR 359
+ + A VY +M+ SP++ T +++GL K G+ ++ +++++M G+ S
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
N ++Y I I GL + G ++A ++ + + DS + L+ G CK G + +A ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLF-YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
L E G + + YSS+I+ L + RR A + + M K+ K + + LI G K
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
+ E +K D + + LI ++MG + A + M PDV T N +L +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 338 CKWGKVEE-----SFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+ EE +F ++ EM + S N+ ++ I + GL++ G+ +A +++ + G
Sbjct: 173 MR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR- 227
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
++ + TY ILI GLC+ G + A ++ E + G D A++++++ CK R+ +A
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
++ L +K G L + LIDG + T F+
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
+ +I LS+ D + +++ VS D +++ K G E++ E + M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST----TYGILIHGLCK 409
+ R +V +YN+ ++ + EE + + L + + T+GIL+ GL K
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
G + A ++ ++ RG + Y+ +I+ LC+ DDA + M G ++
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 470 CNPLIDGFIKNSNLTLLFKSL 490
N L+DGF K + F+ L
Sbjct: 271 HNALLDGFCKLGRMVEAFELL 291
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 9/250 (3%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P + S+N L+N F + + A K G+SP+ TYN LI L + E+A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L + + R Y +L+ + ++ + A ++ + ++ D N I+
Sbjct: 572 FKL--FYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE-IEQ 628
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVV--SYNVMIRGLSRCGRFSESLEIWERMKKNER 288
FK G+ +A RL+ +T + Y + + GL + GRF E+L ++ +++ +
Sbjct: 629 CFKEGETERA---LRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKI 685
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG-KVEESF 347
+ LIHGL + LD A V+ + CN +L+ L + K+E
Sbjct: 686 LVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVS 745
Query: 348 ELWEEMGQSG 357
+L M ++G
Sbjct: 746 QLTNRMERAG 755
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 188/361 (52%), Gaps = 4/361 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL + + +A+ L +M + G +P +F +L++ + + A
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P++ TY ++ LCK+ + + A LL M + + Y T+I++ K +
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM +GV P+V+ Y+ +I G + A+ + ++ E + PN+V+++ +I
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNLVTFSALI 330
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ G+ ++ +++E M K ++FTYSSLI+G + L A+++ + MI +
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P+VVT N ++NG CK +V++ EL+ EM Q G N ++Y I G F+ + A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ ++ + + TY IL+ GLCKNG L KA+ V E + + D++ Y+ MI +C
Sbjct: 451 FKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Query: 444 K 444
K
Sbjct: 510 K 510
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 196/399 (49%), Gaps = 4/399 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A AK + D ++ KM+ + G + ++N L+N F + A
Sbjct: 84 LLSAIAKMNKFDLVISFGEKME-ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL 142
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ T N L+ C A L+ M +G +PD ++ TLI+ + A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ + D M +RG +PD++ Y +++G K GD A + ++ + NVV Y+ +I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVVIYSTVID 261
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L + ++L ++ M+ + +V TYSSLI L G A R+ DMI R+++P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIW 384
++VT +A+++ K GK+ ++ +L+EEM +S N+ +Y+ I G ++ EA +
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
EL++ + L + TY LI+G CK ++K +++ E RG + Y+++I+ +
Sbjct: 382 ELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
R D+A V M G N N L+DG KN L
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 169/317 (53%), Gaps = 5/317 (1%)
Query: 63 APHIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
A + I+ C D+ ++ KR D ALNL KM+ V ++
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA-KIEANVVIYS 257
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
+++++ + A F + GV PNV TY+ LI LC + A LL M
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
+ P+ ++ LI+A K+G L A ++++EM +R ++P++ Y+ +I+GF +A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
+M E ++R++ + PNVV+YN +I G + R + +E++ M + + TY++LIH
Sbjct: 378 KQMLELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR- 359
G Q + D AQ V+K M+ V P+++T N +L+GLCK GK+ ++ ++E + +S
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 360 NVISYNIFIKGLFENGK 376
++ +YNI I+G+ + GK
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 185/371 (49%), Gaps = 3/371 (0%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G P + + NSLLN F + A G P+ T+ LI L + +
Sbjct: 142 LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A L+ M G +PD +YG ++N KRGD + AL + ++M +E +V+ Y+ +ID
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
K A ++ + + V PNV++Y+ +I L GR+S++ + M + +
Sbjct: 262 SLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
++ T+S+LI + G L A+++Y++MI R + P++ T ++++NG C ++ E+ ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
E M + NV++YN I G + +V++ M ++ + + L ++ TY LIHG
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM-SQRGLVGNTVTYTTLIHGFF 439
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+ + A V ++ G ++ Y+ +++ LCK +L A V + + + + +
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 469 VCNPLIDGFIK 479
N +I+G K
Sbjct: 500 TYNIMIEGMCK 510
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 174/328 (53%), Gaps = 4/328 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + EA+ L +M + GC+P + ++ +++N + A +
Sbjct: 188 TLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
A + NV Y+ +I LCK R + A L M G+RP+ +Y +LI+ G +
Sbjct: 247 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + +M ER + P+++ ++ +ID F K G +KA +++E +++ ++ PN+ +Y+ +I
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLI 365
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G R E+ ++ E M + + +V TY++LI+G + +D ++++M R +
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ VT +++G + + + ++++M G N+++YNI + GL +NGK+ +AM +
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNG 411
+E L T + D TY I+I G+CK G
Sbjct: 486 FEYLQRST-MEPDIYTYNIMIEGMCKAG 512
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ A+ K+ +A L+ +M + P + +++SL+N F + ++ A++
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
PNV TYN LI CK + +K L R MS GL + +Y TLI+ + D + A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
VF +M GV P+++ YN+++DG K+G KA ++E L R T+ P++ +YN+MI
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIE 506
Query: 266 GLSRCGRF 273
G+ + G++
Sbjct: 507 GMCKAGKW 514
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 212/397 (53%), Gaps = 7/397 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
++ +Y + + +++ F +M D G PG FN LL S + + FF +
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDN--GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ V +V ++ +LIK C+ E EK+ LL ++ G P+ Y TLI+ K+G++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A ++F EM + G+ + Y ++I+G FK+G + EM+E+ ++E+ VFPN+ +YN +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK-MQEDGVFPNLYTYNCV 274
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ L + GR ++ ++++ M++ ++ TY++LI GL + L+ A +V M +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
+P+++T N +++G C GK+ ++ L ++ G S ++++YNI + G G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ + + E + TY ILI ++ + KA+Q+ E G DV YS +I+
Sbjct: 395 MVK-EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
C + ++++A+ + M ++ C+ N + N +I G+ K
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 191/390 (48%), Gaps = 38/390 (9%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
V SF L+ + + E++ G SPNV Y LI CKK E EKAK L
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
M +GL ++ +Y LIN K G E++++M E GV P++ YN +++ K G
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
A ++++ +RE V N+V+YN +I GL R + +E+ ++ ++MK + ++ TY
Sbjct: 283 RTKDAFQVFDE-MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
++LI G +G L A + +D+ R +SP +VT N +++G C+ G + ++ +EM +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 356 SGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
G + + ++Y I I + +E+A+ + L + E L D TY +LIHG C G +N
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 415 -----------------------------------KALQVLEEAEHRGGDVDVFAYSSMI 439
+AL++L+E E + +V +Y MI
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 440 NALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
LCKER+ +A +V M G +T +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 7/313 (2%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
+E L+ K + + ++ KM D VF P + ++N ++N + + A
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF---PNLYTYNCVMNQLCKDGRTKDAF 288
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
+ F GVS N+ TYN LI LC++ + +A ++ M G+ P+ +Y TLI+
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
G L AL + ++ RG+ P ++ YN+++ GF + GD A +M + + E + P+
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE-MEERGIKPS 407
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
V+Y ++I +R +++++ M++ DV TYS LIHG G ++ A R++K
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENG 375
M+ + P+ V N M+ G CK G + +L +EM + + NV SY I+ L +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 376 KVEEAMNIWELLL 388
K +EA + E ++
Sbjct: 528 KSKEAERLVEKMI 540
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 174/374 (46%), Gaps = 54/374 (14%)
Query: 155 NVLIKVLCKK--REFEKAKGLLRWMSGVGLRPDKFS-YGTLINAAAKRGDLNAALEVFDE 211
++L++V+ K +F + LL +++ KF Y +IN+ + LN ++ F+E
Sbjct: 60 SLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNE 119
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE-------------------------- 245
M + G P C+N ++ S F N+ W
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSF---NQWWSFFNENKSKVVLDVYSFGILIKGCCEA 176
Query: 246 -------RLLREETVF---PNVVSYNVMIRGLSRCGRFSESLEIWERMKK-----NERKH 290
LL E T F PNVV Y +I G + G ++ +++ M K NER
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER-- 234
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
TY+ LI+GL + G +Y+ M V P++ T N ++N LCK G+ +++F+++
Sbjct: 235 ---TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
+EM + G S N+++YN I GL K+ EA + + + + + + TY LI G C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCG 350
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
G L KAL + + + RG + Y+ +++ C++ AA +V M++RG K +
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 470 CNPLIDGFIKNSNL 483
LID F ++ N+
Sbjct: 411 YTILIDTFARSDNM 424
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 25/457 (5%)
Query: 15 NLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRR-VASDPTLLPHAPHIIGAIEAA 73
+L S+ + S+ ++ T+H + + +L + +R + S P +L ++G +
Sbjct: 72 SLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRS---LVGGVSED 128
Query: 74 QNCNCSEDVPLT---LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSE 130
EDV L+ YAK M ++++ +F ++ R G +P +++ LLN+
Sbjct: 129 -----PEDVSHVFSWLMIYYAKAGMINDSIVVFEQI-RSCGLKPHLQACTVLLNSLVKQR 182
Query: 131 QWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
+ K F GV N+ YNVL+ K + EKA+ LL M G+ PD F+Y
Sbjct: 183 LTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
TLI+ K+ AL V D M GV P+++ YN I GF + G +A RL RE
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT----RLFRE 298
Query: 251 --ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ V N V+Y +I G R E+L + E M+ V TY+S++ L + G +
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIF 367
A R+ +M G+++ PD +TCN ++N CK + + ++ ++M +SG + ++ SY
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 368 IKGLFENGKVEEAMNIWELLLG--ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I G KV E N E L E + TY L+ G ++ ++LEE E
Sbjct: 419 IHGF---CKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
RG DV Y +I +CK ++D A + M+K+G
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 162/298 (54%), Gaps = 4/298 (1%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
GL+P + L+N+ K+ + ++F +M + GV ++ YN+++ KSGD KA
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
++ + E+ VFP++ +YN +I + E+L + +RM+++ ++ TY+S IH
Sbjct: 223 EKLLSEM-EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SR 359
G S+ G + A R++++ I V+ + VT +++G C+ ++E+ L E M G S
Sbjct: 282 GFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
V++YN ++ L E+G++ EA + + G+ + D+ T LI+ CK + A++V
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSGK-KIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
++ G +D+++Y ++I+ CK L++A + M ++G + L+DGF
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 173/361 (47%), Gaps = 21/361 (5%)
Query: 138 FFAYFDTAGVSPN-VETYNVLIKVLCKKREFEKAKGLLRWMS----------------GV 180
FF + D+ S + +++ +I +L K + F+ A LL ++ GV
Sbjct: 66 FFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGV 125
Query: 181 GLRPDKFS--YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
P+ S + L+ AK G +N ++ VF+++ G++P + ++++ K
Sbjct: 126 SEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD 185
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
++++++++ V N+ YNV++ S+ G ++ ++ M++ D+FTY++L
Sbjct: 186 TVWKIFKKMVKLGVV-ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I + A V M V+P++VT N+ ++G + G++ E+ L+ E+ +
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT 304
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
N ++Y I G ++EA+ + E++ + TY ++ LC++G + +A +
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVM-ESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
+L E + + D +++INA CK + A V M + G KL+ + LI GF
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 479 K 479
K
Sbjct: 424 K 424
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y + + DEAL L R++ G PGV ++NS+L + A +
Sbjct: 312 TLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ P+ T N LI CK + A + + M GL+ D +SY LI+ K +L
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFF---KSGDFLKANEMWERLLREETVFPNVVSYN 261
A E M E+G P Y+ ++DGF+ K + K E +E+ + +V Y
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK----RGLCADVALYR 486
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+IR + + + + ++E M+K D ++++ + + G + A ++ M R
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
Query: 322 RV 323
R+
Sbjct: 547 RL 548
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K G + +S ++E++ G + ++ + + + L + + +W++ L V +
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD---TVWKIFKKMVKLGVVA 201
Query: 398 T--TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
Y +L+H K+G KA ++L E E +G D+F Y+++I+ CK+ +A V
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKNSNL---TLLFKSL 490
M++ G N N I GF + + T LF+ +
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 190/372 (51%), Gaps = 4/372 (1%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
FG P +FN+L++ ++ A K F + G++P+ +Y VL+ LCK EF+
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A+G M G+ + +Y +I+ K G L+ A+ + +EMS+ G++PD++ Y+ +I+
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
GF K G F A E+ R+ R + PN + Y+ +I R G E++ I+E M
Sbjct: 487 GFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
D FT++ L+ L + G + A+ + M + P+ V+ + ++NG G+ ++F +
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
++EM + G +Y +KGL + G + EA + L A AVD+ Y L+ +C
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMC 664
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKL-NT 467
K+G L KA+ + E R D + Y+S+I+ LC++ + A + RG L N
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 468 HVCNPLIDGFIK 479
+ +DG K
Sbjct: 725 VMYTCFVDGMFK 736
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 216/466 (46%), Gaps = 55/466 (11%)
Query: 26 ALQLFQHATRHPGY-----THSSAVLQHVL---------RRVASDPTLLP-HAPHIIGAI 70
AL+ + + PG + H+L R + + +L+ + + GA+
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152
Query: 71 EAAQN-CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS 129
CN + V L++ Y + M ++L +FR M ++G P V + N++L + S
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG-LYGFNPSVYTCNAILGSVVKS 211
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+ F + P+V T+N+LI VLC + FEK+ L++ M G P +Y
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
T+++ K+G AA+E+ D M +GV+ DV YNM+I +S K + R +R
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG-YLLLRDMR 330
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ + PN V+YN +LI+G S G +
Sbjct: 331 KRMIHPNEVTYN-----------------------------------TLINGFSNEGKVL 355
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFI 368
A ++ +M+ +SP+ VT NA+++G G +E+ +++ M G + + +SY + +
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
GL +N + + A + + + + V TY +I GLCKNG+L++A+ +L E G
Sbjct: 416 DGLCKNAEFDLARGFY-MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
D D+ YS++IN CK R A +V + + G N + + LI
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 202/418 (48%), Gaps = 39/418 (9%)
Query: 102 LFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVL 161
L +KM++ G P + ++N++L+ + +++ A + + + GV +V TYN+LI L
Sbjct: 255 LMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 162 CKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
C+ K LLR M + P++ +Y TLIN + G + A ++ +EM G+ P+
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+ +N +IDG G+F +A +M+ ++ + + P+ VSY V++ GL + F + +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
RMK+N TY+ +I GL + G LD A + +M + PD+VT +A++NG CK G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 342 KVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
+ + + E+ + + G S N I Y+ I G ++EA+ I+E ++ E D T+
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE-GHTRDHFTF 551
Query: 401 GILIHGLCK------------------------------NGYLN-----KALQVLEEAEH 425
+L+ LCK NGY N KA V +E
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
G F Y S++ LCK L +A + + ++T + N L+ K+ NL
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 209/472 (44%), Gaps = 85/472 (18%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ K DEA+ L +M + G P + ++++L+N F +++ A++
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 146 GVSPN----------------------------VE-------TYNVLIKVLCKKREFEKA 170
G+SPN +E T+NVL+ LCK + +A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ +R M+ G+ P+ S+ LIN G+ A VFDEM++ G P Y ++ G
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 231 FFKSGDFLKANEMWERLLREETVFP---NVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
K G +A E+ L+ P + V YN ++ + + G ++++ ++ M +
Sbjct: 628 LCKGGHLREA----EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 288 RKHDVFTYSSLIHGLSQMGN---------------------------LDGAQRVYK---- 316
D +TY+SLI GL + G +DG + +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 317 -------DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYNIFI 368
D +G +PD+VT NAM++G + GK+E++ +L EMG Q+G N+ +YNI +
Sbjct: 744 IYFREQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G + V + ++ ++ L D T L+ G+C++ L L++L+ RG
Sbjct: 802 HGYSKRKDVSTSFLLYRSIILNGILP-DKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+VD + ++ +I+ C ++ A +V +M G L+ C+ ++ +N
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 169/361 (46%), Gaps = 5/361 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y +A ++F +M +V G P ++ SLL AEKF
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ + YN L+ +CK KA L M + PD ++Y +LI+ ++G A
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 206 LEVFDEMSERG-VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
+ E RG V P+ + Y +DG FK+G + KA + + P++V+ N MI
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G SR G+ ++ ++ M ++ TY+ L+HG S+ ++ + +Y+ +I +
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD +TC++++ G+C+ +E ++ + G + ++N+ I NG++ A ++
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+++ +++D T ++ L +N ++ VL E +G + Y +IN LC
Sbjct: 887 VKVMT-SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Query: 444 K 444
+
Sbjct: 946 R 946
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 163/354 (46%), Gaps = 3/354 (0%)
Query: 103 FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLC 162
FR+ G P + + N++++ ++ + E+ PN+ TYN+L+
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 163 KKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
K+++ + L R + G+ PDK + +L+ + L L++ RGVE D
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER 282
+NM+I +G+ A ++ +++ + + + + M+ L+R RF ES +
Sbjct: 866 TFNMLISKCCANGEINWAFDLV-KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
M K + Y LI+GL ++G++ A V ++MI ++ P V +AM+ L K GK
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 343 VEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
+E+ L M + + S+ + +NG V EA+ + +++ L +D +Y
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL-RVVMSNCGLKLDLVSYN 1043
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+LI GLC G + A ++ EE + G + Y ++I L A ++
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 3/288 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL Y+KR + L+R + + G P + +SL+ S E K F
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV + T+N+LI C E A L++ M+ +G+ DK + +++ + +
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
V EMS++G+ P+ Y +I+G + GD A + E ++ + PNV + M+R
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVR 977
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L++CG+ E+ + M K + + ++++L+H + GN+ A + M +
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLF 372
D+V+ N ++ GLC G + +FEL+EEM G N +Y I+GL
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 4/230 (1%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+V Y+++IR R G +SLEI+ M V+T ++++ + + G
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
K+M+ R++ PDV T N ++N LC G E+S L ++M +SG + +++YN + +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
G+ + A+ + + + + + D TY +LIH LC++ + K +L + R +
Sbjct: 281 KGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
Y+++IN E ++ A+ +++ M G N N LIDG I N
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 226/447 (50%), Gaps = 8/447 (1%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
K +S ++L+K E++P L +F A++ G+ H++A +L + L A
Sbjct: 52 KFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFL--AVD 109
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
I + C E + L L++ +++ + D+ + +F + + +P + + ++ LN
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 126 FAVSEQWERAEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR- 183
S + + K Y G+ PN +N+L+K CK + A ++ M G+
Sbjct: 170 LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISY 229
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
P+ +Y TL++ A+E+F++M S+ G+ PD + +N++I+GF ++G+ +A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ + +++ PNV +Y+ ++ G + G+ E+ + ++ +KK K D Y++L++
Sbjct: 290 ILD-FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NV 361
+ G D A ++ +M R D +T N +L GL G+ EE+ ++ ++ G G N
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
SY I + L NG++E+A+ ++ E + T+ L+ LC++GY ++VL
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLS-VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRL 448
G ++ +++ ++CKER+L
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 152/287 (52%), Gaps = 10/287 (3%)
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER-GVEPDVMCYNMIIDGFFKSGDFLKA 240
++P + T +N G++N + ++ G++P+ +N+++ K+GD A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLI 299
+ E + R +PN ++Y+ ++ L R E++E++E M E D T++ +I
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
+G + G ++ A+++ M +P+V +A++NG CK GK++E+ + ++E+ ++G +
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 360 -NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA---VDSTTYGILIHGLCKNGYLNK 415
+ + Y + NG+ +EAM LLGE + D+ TY +++ GL G +
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMK----LLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
ALQ+L++ G ++ +Y ++NALC L+ A +S+M +RG
Sbjct: 392 ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMSE-RGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
S+ + ++ + D L++F++ S+ +G + Y++++D + FL + +
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 113
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQ 304
++ E F + N+M R SR + +E++ ++ R K + S+ ++ L
Sbjct: 114 QMKYETCRFQESLFLNLM-RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLID 172
Query: 305 MGNLDGAQRVY---KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-- 359
G ++ ++++ K +G + P+ N ++ CK G + +F + EEM +SG
Sbjct: 173 SGEVNLSRKLLLYAKHNLG--LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYP 230
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
N I+Y+ + LF + + +EA+ ++E ++ + ++ D T+ ++I+G C+ G + +A ++
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
L+ + G + +V+ YS+++N CK ++ +A + K G KL+T L++ F +
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 480 NSNLTLLFKSLGK 492
N K LG+
Sbjct: 351 NGETDEAMKLLGE 363
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ S EA+ LF M G P +FN ++N F + + ERA+K +
Sbjct: 237 TLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK 296
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G +PNV Y+ L+ CK + ++AK + GL+ D Y TL+N + G+ +
Sbjct: 297 NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDE 356
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+++ EM D + YN+I+ G G +A +M ++ E V N SY +++
Sbjct: 357 AMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ-WGSEGVHLNKGSYRIIL 415
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
L G ++++ M + T++ L+ L + G + RV + +
Sbjct: 416 NALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEM 353
P + A++ +CK K+ FEL + +
Sbjct: 476 PGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + + DEA+ L +M + CR ++N +L + + E A + + +
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEM-KASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV N +Y +++ LC E EKA L MS G+ P ++ L+ + G
Sbjct: 402 EGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEI 461
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
+ V G+ P + +++ K + E+ + L+
Sbjct: 462 GVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 205/429 (47%), Gaps = 48/429 (11%)
Query: 98 EALNLFR-KMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+AL+ R M+R G R G+ S N +L +V +Q E A + + G +PNV T+
Sbjct: 235 KALDFHRLVMER--GFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI CK+ E ++A L + M G+ PD +Y TLI+ K G L ++F + +G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
V+ DV+ ++ ID + KSGD A+ +++R+L + + PNVV+Y ++I+GL + GR E+
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
++ ++ K + + TYSSLI G + GNL +Y+DMI PDVV +++G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 337 LCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
L K G + + +M GQS NV+ +N I G + +EA+ ++ L+G +
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKP 529
Query: 396 DSTTY------GILIHGLCKNGYLNKALQVLEEAE---------------------HRGG 428
D T+ I+ CK+ LQ+ + + HR
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 429 DV--------------DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
D D+ Y++MI C RRLD+A + L+ NT LI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 475 DGFIKNSNL 483
KN+++
Sbjct: 650 HVLCKNNDM 658
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 193/412 (46%), Gaps = 45/412 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y K M LF + G + V F+S ++ + S A +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+SPNV TY +LIK LC+ +A G+ + G+ P +Y +LI+ K G+L +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
++++M + G PDV+ Y +++DG K G L A ++L +++ NVV +N +I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML-GQSIRLNVVVFNSLI 503
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL-------------------------- 298
G R RF E+L+++ M K DV T++++
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 299 ---------------IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
IH L + ++ A + + ++I ++ PD+VT N M+ G C ++
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 344 EESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI 402
+E+ ++E + + N ++ I I L +N ++ A+ ++ ++ E ++ TYG
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-AEKGSKPNAVTYGC 682
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
L+ K+ + + ++ EE + +G + +YS +I+ LCK R+D+A +
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 168/350 (48%), Gaps = 10/350 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ + K L+ M ++ G P V + L++ + A +F
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLI------NAAAK 198
+ NV +N LI C+ F++A + R M G++PD ++ T++ +A K
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
L++FD M + D+ N++I FK A++ + L+ E + P++V
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIV 608
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+YN MI G R E+ I+E +K + T + LIH L + ++DGA R++ M
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKV 377
+ P+ VT +++ K +E SF+L+EEM + G S +++SY+I I GL + G+V
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+EA NI+ + + L D Y ILI G CK G L +A + E G
Sbjct: 729 DEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 223/463 (48%), Gaps = 20/463 (4%)
Query: 14 LNLLKSEKNPHSALQLFQHAT---RHPG-YTHSSAVLQHVLRRVASD--PTLLPHAPHII 67
L LL E P+SAL+ F+ A + P YT + ++++ + VA ++ +
Sbjct: 74 LVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGV----RSFNSLL 123
+ + ++ + DV L++ + M D+AL +F V+ + GV S +L
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIF-----VYSTQLGVVIPQDSVYRML 188
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPN-VETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
N+ S++ + F G+ P+ V + ++ L K E KA R + G
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGF 248
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
R S ++ + + A + + + G P+V+ + +I+GF K G+ +A +
Sbjct: 249 RVGIVSCNKVLKGLSV-DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
++ +++ + + P++++Y+ +I G + G +++ + K DV +SS I
Sbjct: 308 LF-KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NV 361
+ G+L A VYK M+ + +SP+VVT ++ GLC+ G++ E+F ++ ++ + G ++
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
++Y+ I G + G + ++E ++ + D YG+L+ GL K G + A++
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
+ + ++V ++S+I+ C+ R D+A V LM G K
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 2/238 (0%)
Query: 89 AYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVS 148
A+ K P L LF M R + N +++ + E A KFF +
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEV 208
P++ TYN +I C R ++A+ + + P+ + LI+ K D++ A+ +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 209 FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
F M+E+G +P+ + Y ++D F KS D + +++E ++E+ + P++VSY+++I GL
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE-MQEKGISPSIVSYSIIIDGLC 723
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
+ GR E+ I+ + + DV Y+ LI G ++G L A +Y+ M+ V PD
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 190/405 (46%), Gaps = 29/405 (7%)
Query: 94 SMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF--------AYFDTA 145
S P+ AL FR + + G P SF ++ + + ++ A+K F F+
Sbjct: 81 SEPNSALKYFRWAE-ISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVL 136
Query: 146 GV----SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
G S + + L++ C+ +KA + + + +G+ + S ++N+
Sbjct: 137 GSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDR 196
Query: 202 LNAALEVFDEMSERGVEPD-VMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
++ + FD++ G+EP V + ++D F G+ KA + + RL+ E +VS
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERGFRVGIVSC 255
Query: 261 NVMIRGLSRCGRFSESLEIWERMKK----NERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
N +++GLS + +E+ R+ +V T+ +LI+G + G +D A ++K
Sbjct: 256 NKVLKGLS-----VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENG 375
M R + PD++ + +++G K G + +L+ + G + +V+ ++ I ++G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+ A +++ +L + ++ + TY ILI GLC++G + +A + + RG + + Y
Sbjct: 371 DLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
SS+I+ CK L + M K G + + L+DG K
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 59/396 (14%)
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
F D++ N++ + +L + E A RW G P S+ T+ + +
Sbjct: 55 FNLLDSSVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIR 111
Query: 199 RGDLNAALEVFDEM--------------SERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
G + A +VFDEM +R ++ DV +++ + G KA E++
Sbjct: 112 NGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIF 169
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLS 303
+ V P Y M+ L R + ++++ + V + ++ L
Sbjct: 170 VYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALF 228
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVI 362
G + A ++ ++ R +V+CN +L GL ++E + L + G + NV+
Sbjct: 229 CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVV 287
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ I G + G+++ A ++++++ + + D Y LI G K G L ++ +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVM-EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 423 AEHRGGDVDVFAYSS-----------------------------------MINALCKERR 447
A H+G +DV +SS +I LC++ R
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ +A G+ + KRG + + + LIDGF K NL
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 224/461 (48%), Gaps = 31/461 (6%)
Query: 48 HVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMD 107
++L R D + + A + + + C +E L++ Y K + D+ L L M+
Sbjct: 151 NLLIRALCDSSCVDAARELFDEM-PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 108 RVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREF 167
FG P +N+++++F + + +EK G+ P++ T+N I LCK+ +
Sbjct: 210 S-FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 168 EKAKGLLRWMS---GVGL-RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMC 223
A + M +GL RP+ +Y ++ K G L A +F+ + E +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN+ + G + G F++A + +++ ++ + P++ SYN+++ GL + G S++ I M
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQM-TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
K+N D TY L+HG +G +D A+ + ++M+ P+ TCN +L+ L K G++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 344 EESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL----------LGETA 392
E+ EL +M + G + ++ NI + GL +G++++A+ I + + LG +
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 393 LAV------------DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ + D TY L++GLCK G +A + E D AY+ I+
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF-IKN 480
CK+ ++ A V+ M+K+GC + N LI G IKN
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 228/476 (47%), Gaps = 10/476 (2%)
Query: 16 LLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHV--LRRVASDPTLLPHAPHIIGAIEAA 73
LLK+ NP A ++F+ P L + R+ + + I ++
Sbjct: 9 LLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSS 68
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFG-CRPGVRSFNSLLNAFAVSEQW 132
L+++ +AK + D+A F+ + F +P V +N LL + +
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV 128
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E + G++P T+N+LI+ LC + A+ L M G +P++F++G L
Sbjct: 129 EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
+ K G + LE+ + M GV P+ + YN I+ F + G + +M E+ +REE
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK-MREEG 247
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER----KHDVFTYSSLIHGLSQMGNL 308
+ P++V++N I L + G+ ++ I+ M+ +E + + TY+ ++ G ++G L
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
+ A+ +++ + + + N L GL + GK E+ + ++M G ++ SYNI
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ GL + G + +A I L+ + D+ TYG L+HG C G ++ A +L+E
Sbjct: 368 MDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ + + ++++L K R+ +A ++ M+++G L+T CN ++DG + L
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 207/435 (47%), Gaps = 35/435 (8%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L++A S D A LF +M GC+P +F L+ + + ++ + ++
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV PN YN ++ C++ + ++ ++ M GL PD ++ + I+A K G + A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 206 LEVFDEMSERGV----EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
+F +M P+ + YN+++ GF K G A ++E + RE ++ SYN
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI-RENDDLASLQSYN 330
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+ ++GL R G+F E+ + ++M +++Y+ L+ GL ++G L A+ + M
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEA 380
V PD VT +L+G C GKV+ + L +EM ++ N + NI + L++ G++ EA
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 381 MNIWELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV-------- 430
ELL + E +D+ T I++ GLC +G L+KA+++++ G
Sbjct: 451 ---EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 431 ---------------DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
D+ YS+++N LCK R +A + + M + ++ N I
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 476 GFIKNSNLTLLFKSL 490
F K ++ F+ L
Sbjct: 568 HFCKQGKISSAFRVL 582
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 191/381 (50%), Gaps = 9/381 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P +FN L+ A S + A + F G PN T+ +L++ CK +K
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
LL M G+ P+K Y T++++ + G + + ++ ++M E G+ PD++ +N I
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 231 FFKSGDFLKANEMWERLLREETV---FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
K G L A+ ++ + +E + PN ++YN+M++G + G ++ ++E +++N+
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+ +Y+ + GL + G A+ V K M + + P + + N +++GLCK G + ++
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 348 ELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
+ M ++G + ++Y + G GKV+ A ++ + ++ L ++ T IL+H
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-NAYTCNILLHS 440
Query: 407 LCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
L K G +++A ++L + +G +D + +++ LC LD A +V M G
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 467 THVCNPLI----DGFIKNSNL 483
++ N I D I+N+ L
Sbjct: 501 GNLGNSYIGLVDDSLIENNCL 521
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 201/442 (45%), Gaps = 59/442 (13%)
Query: 98 EALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
EA + ++M D+ G P + S+N L++ A+ GV P+ TY
Sbjct: 344 EAETVLKQMTDKGIG--PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L+ C + + AK LL+ M P+ ++ L+++ K G ++ A E+ +M+E+G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERL----------------------LREETVF 254
D + N+I+DG SG+ KA E+ + + L E
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P++++Y+ ++ GL + GRF+E+ ++ M + + D Y+ IH + G + A RV
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
KDM + + T N+++ GL ++ E L +EM + G S N+ +YN I+ L E
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 374 NGKVEEAMNIWELLLG------------------------------ETALAV---DSTTY 400
KVE+A N+ + ++ ETA+++ Y
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
++ + L G L KA ++LE RG ++ F Y ++ +LCK+ L+ A+G++ M
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 461 RGCKLNTHVCNPLIDGFIKNSN 482
RG + P+IDG K N
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGN 783
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 197/394 (50%), Gaps = 5/394 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ AY + D+A+ ++ + G V ++NSL+N +A+ E +
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GVS NV TY LIK CKK E+A+ + + L D+ YG L++ + G + A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ V D M E GV + N +I+G+ KSG ++A +++ R + + ++ P+ +YN ++
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR-MNDWSLKPDHHTYNTLVD 409
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G R G E+L++ ++M + E V TY+ L+ G S++G ++K M+ R V+
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
D ++C+ +L L K G E+ +LWE + G + I+ N+ I GL + KV EA I
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 385 E-LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + + AV TY L HG K G L +A V E E +G + Y+++I+
Sbjct: 530 DNVNIFRCKPAVQ--TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAF 587
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
K R L+ A +V + RG LI G+
Sbjct: 588 KYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 244/503 (48%), Gaps = 22/503 (4%)
Query: 3 DLPKPLSPHRLLNLLKSEK-NPHSALQLFQHATRH----PGYTHSSAVLQHVLRRVAS-- 55
DL S L ++L+ + NP + L++F A++ P Y + + H+L R +
Sbjct: 63 DLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDY-KAYCKMVHILSRARNYQ 121
Query: 56 -------DPTLLPHAPHIIGA--IEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKM 106
+ L H+ ++ + + + S V +LK YA++ + AL++F M
Sbjct: 122 QTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNM 181
Query: 107 DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKRE 166
+G P + S NSLL+ + A + + VSP+V T ++++ C+
Sbjct: 182 GN-YGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGN 240
Query: 167 FEKAKGLLRWM-SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYN 225
+KA + S +GL + +Y +LIN A GD+ V MSERGV +V+ Y
Sbjct: 241 VDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYT 300
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
+I G+ K G +A ++E LL+E+ + + Y V++ G R G+ +++ + + M +
Sbjct: 301 SLIKGYCKKGLMEEAEHVFE-LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+ + +SLI+G + G L A++++ M + PD T N +++G C+ G V+E
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 346 SFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ +L ++M Q V++YNI +KG G + +++W+++L + + D + L+
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML-KRGVNADEISCSTLL 478
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
L K G N+A+++ E RG D + MI+ LCK ++++A ++ ++ CK
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 465 LNTHVCNPLIDGFIKNSNLTLLF 487
L G+ K NL F
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAF 561
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 205/473 (43%), Gaps = 76/473 (16%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ Y K EA +F +M+ + +P ++N+L++ + + + A K
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMND-WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V P V TYN+L+K + F L + M G+ D+ S TL+ A K GD N
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDG---------------------------------- 230
A+++++ + RG+ D + N++I G
Sbjct: 490 AMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSH 549
Query: 231 -FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
++K G+ +A + E + R+ +FP + YN +I G + ++ ++ ++
Sbjct: 550 GYYKVGNLKEAFAVKEYMERK-GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES--- 346
V TY +LI G +G +D A +MI + ++ +V C+ + N L + K++E+
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 347 ------FELW-------------------------EEMGQSGSR-----NVISYNIFIKG 370
F+L E + S + N I YN+ I G
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
L + GK+E+A ++ LL D TY ILIHG G +NKA + +E +G
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
++ Y+++I LCK +D A ++ + ++G N N LIDG +K+ N+
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 208/470 (44%), Gaps = 34/470 (7%)
Query: 39 YTHSSAVLQHVLRRVASD------PTLLPHAPH--IIGAIEAAQNCNCSEDVPLTLLKAY 90
YT S + LRR P LL ++G EA + S D LL +
Sbjct: 19 YTRSFSEASRTLRRELRGGNGRIRPELLERVSRLLVLGRYEALHDL--SLDFSDELLNSI 76
Query: 91 AKRSM--PDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFA-------- 140
+R P+ L +F + RP +++ +++ + + +++ + +
Sbjct: 77 LRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHS 136
Query: 141 ----------YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
F SP V +++++KV +K + A + M G P S
Sbjct: 137 GFVVWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCN 194
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
+L++ ++G+ AL V+D+M V PDV +++++ + +SG+ KA +
Sbjct: 195 SLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ NVV+YN +I G + G + M + +V TY+SLI G + G ++
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIK 369
A+ V++ + +++ D +++G C+ G++ ++ + + M + G R N N I
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD 429
G ++G++ EA I+ + + +L D TY L+ G C+ GY+++AL++ ++ +
Sbjct: 375 GYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
Query: 430 VDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
V Y+ ++ + D + +M KRG + C+ L++ K
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 73/322 (22%)
Query: 109 VFGCRPGVRSFNSLLN----------AFAVSEQWERAEKF-------------FAY---- 141
+F C+P V+++ +L + AFAV E ER F F Y
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 142 --------FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL----------- 182
G++P V TY LI C +KA M G+
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 183 ----RPDKFSYGTLINAAAKRGDL----NAALEVFDEMS-------------------ER 215
R DK L+ DL +L+ F E S ++
Sbjct: 654 NSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKK 713
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
+ P+ + YN+ I G K+G A +++ LL + P+ +Y ++I G + G ++
Sbjct: 714 LLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINK 773
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
+ + + M ++ TY++LI GL ++GN+D AQR+ + + ++P+ +T N +++
Sbjct: 774 AFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 336 GLCKWGKVEESFELWEEMGQSG 357
GL K G V E+ L E+M + G
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKG 855
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS--EQWERAEKFFAYFDTAGVSPNVETY 154
DEA L +K+ PG +S L A A + + + AE + PN Y
Sbjct: 663 DEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVY 722
Query: 155 NVLIKVLCKKREFEKAKGLLR-WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
NV I LCK + E A+ L +S PD+++Y LI+ A GD+N A + DEM+
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 214 -----------------------------------ERGVEPDVMCYNMIIDGFFKSGDFL 238
++G+ P+ + YN +IDG KSG+
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 239 KANEMWERLLREETV 253
+A + E+++ + V
Sbjct: 843 EAMRLKEKMIEKGLV 857
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 220/467 (47%), Gaps = 38/467 (8%)
Query: 1 MVDLPKPLSPHRLLNLLKSEKNPHSALQLFQHATRH--PGYTHSSAVLQHVLRRVASDPT 58
M K ++P +++ L+++EK+ ++ +F AT GY H + +++ R+ S
Sbjct: 7 MFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVS-AN 65
Query: 59 LLPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRS 118
A +I ++ +NC SED+ L++ + Y + P ++L +F KM + F C P ++
Sbjct: 66 KFKAAEDLIVRMKI-ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKA 123
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKR-EFEKAKGLLRWM 177
+ ++L Q A KF+ G+ P V + NVLIK LC+ + + M
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G PD ++YGTLI+ + G ++ A ++F EM E+ P V+ Y +I+G S +
Sbjct: 184 PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNV 243
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+A E ++ + + PNV +Y+ ++ GL + GR +++E++E M + ++ TY++
Sbjct: 244 DEAMRYLEE-MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
LI GL + + A + M + + PD +++G C K E+ +EM G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 358 -SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
+ N +++NI +K T ++ GLC N Y ++A
Sbjct: 363 ITPNRLTWNIHVK-----------------------------TSNEVVRGLCAN-YPSRA 392
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
+ RG V+V S++ LCK+ A +V + GC
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGC 439
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 201 DLNAALEVFDEMSER---GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
D+ ++ VFD + G D + ++ + F A ++ R+ E V
Sbjct: 28 DVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSED 87
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+ ++ RG R R +SL ++ +MK + Y +++ L + L+ A + YK+
Sbjct: 88 ILLSI-CRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 318 MIGRRVSPDVVTCNAMLNGLCKW-GKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENG 375
M + P V + N ++ LC+ G V+ +++ EM + G + +Y I GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+++EA ++ ++ E A TY LI+GLC + +++A++ LEE + +G + +VF Y
Sbjct: 207 RIDEAKKLFTEMV-EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
SS+++ LCK+ R A + +M RGC+ N LI G K +
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 49/353 (13%)
Query: 135 AEKFFAYFDTA------GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
EK A FD+A G + ++ ++ L +F+ A+ L+ M + S
Sbjct: 29 VEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK---IENCVVS 85
Query: 189 YGTLINAAAKRGDLNA---ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
L++ G ++ +L VF +M + +P Y ++ + A + ++
Sbjct: 86 EDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYK 145
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+ RE + P V S NV+I+ L R N+
Sbjct: 146 NM-REIGLPPTVASLNVLIKALCR----------------ND------------------ 170
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISY 364
G +D +++ +M R PD T +++GLC++G+++E+ +L+ EM + + V++Y
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
I GL + V+EAM E + + + + TY L+ GLCK+G +A+++ E
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
RG ++ Y+++I LCKE+++ +A ++ M+ +G K + + +I GF
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D L +F +M + GC P ++ +L++ + + A+K F +P V TY
Sbjct: 174 DAGLKIFLEMPKR-GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI LC + ++A L M G+ P+ F+Y +L++ K G A+E+F+ M RG
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
P+++ Y +I G K +A E+ +R + + + P+ Y +I G +F E+
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDR-MNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 277 LEIWERM-----KKNERKHDVFTYSS--LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
+ M N ++ +S ++ GL A +Y M R +S +V T
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVET 410
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
+++ LCK G+ +++ +L +E+ G I KG W+LL+G
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEIVTDGC-------IPSKG------------TWKLLIG 451
Query: 390 ETALAVDSTTYG 401
T +D T G
Sbjct: 452 HT---LDKTIVG 460
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 202/427 (47%), Gaps = 26/427 (6%)
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ-- 131
+ C S + +L+ AY A L +KM + G PG +N L+ + +
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC-GHMPGYVVYNILIGSICGDKDSL 424
Query: 132 ----WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
+ AEK ++ AGV N + + LC ++EKA ++R M G G PD
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
+Y ++N + A +F+EM G+ DV Y +++D F K+G +A + W
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK-WFNE 543
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+RE PNVV+Y +I + + S + E++E M ++ TYS+LI G + G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 308 LDGAQRVYKDMIGRRVSPD----------------VVTCNAMLNGLCKWGKVEESFELWE 351
++ A ++++ M G + PD VVT A+L+G CK +VEE+ +L +
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 352 EMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
M G N I Y+ I GL + GK++EA + + + E TY LI K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC 470
+ A +VL + +V Y+ MI+ LCK + D+A ++ +M+++GC+ N
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 471 NPLIDGF 477
+IDGF
Sbjct: 783 TAMIDGF 789
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 194/412 (47%), Gaps = 28/412 (6%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A LF +M R G V ++ ++++F + E+A K+F G +PNV TY LI
Sbjct: 502 AFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM------ 212
K ++ A L M G P+ +Y LI+ K G + A ++F+ M
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 213 -------------SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
SER P+V+ Y ++DGF KS +A ++ + + E PN +
Sbjct: 621 PDVDMYFKQYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIV 676
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y+ +I GL + G+ E+ E+ M ++ ++TYSSLI ++ D A +V M+
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
+P+VV M++GLCK GK +E+++L + M + G + NV++Y I G GK+E
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
+ + E + G +A + TY +LI CKNG L+ A +LEE + Y +
Sbjct: 797 TCLELLERM-GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
I KE ++ G++ + + V LID IK L + + L
Sbjct: 856 IEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 205/418 (49%), Gaps = 24/418 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA---------- 135
L+ AY K A LF M GC P + ++++L++ + Q E+A
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 136 ------EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+ +F +D PNV TY L+ CK E+A+ LL MS G P++ Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
LI+ K G L+ A EV EMSE G + Y+ +ID +FK A+++ ++L
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML- 736
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
E + PNVV Y MI GL + G+ E+ ++ + M++ + +V TY+++I G +G ++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFI 368
+ + M + V+P+ VT +++ CK G ++ + L EEM Q+ + Y I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE-AEHRG 427
+G N + E++ + + + G+ A + Y +LI L K L AL++LEE A
Sbjct: 857 EGF--NKEFIESLGLLDEI-GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 428 GDVDVFA-YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
VD + Y+S+I +LC +++ A + S M K+G LI G +NS ++
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKIS 971
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 196/429 (45%), Gaps = 24/429 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + S+ +EA++ +M R C P V ++++LL +Q R ++
Sbjct: 308 LISGLCEASLFEEAMDFLNRM-RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD---- 201
G P+ + +N L+ C + A LL+ M G P Y LI + D
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 202 --LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
L+ A + + EM GV + + + +G + KA + ++ + + P+ +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI-PDTST 485
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y+ ++ L + + ++E MK+ DV+TY+ ++ + G ++ A++ + +M
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVE 378
+P+VVT A+++ K KV + EL+E M G N+++Y+ I G + G+VE
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 379 EAMNIWELLLGETALA-VD--------------STTYGILIHGLCKNGYLNKALQVLEEA 423
+A I+E + G + VD TYG L+ G CK+ + +A ++L+
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
G + + Y ++I+ LCK +LD+A V + M + G + + LID + K
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 484 TLLFKSLGK 492
L K L K
Sbjct: 726 DLASKVLSK 734
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 159/322 (49%), Gaps = 13/322 (4%)
Query: 72 AAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
+ + C ++ V L+ K DEA + +M G + +++SL++ + ++
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSLIDRYFKVKR 724
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
+ A K + +PNV Y +I LCK + ++A L++ M G +P+ +Y
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+I+ G + LE+ + M +GV P+ + Y ++ID K+G A+ + E + ++
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM--KQ 842
Query: 252 TVFP-NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
T +P + Y +I G ++ F ESL + + + +++ + Y LI L + L+
Sbjct: 843 THWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 311 AQRVYKDMIGRRVSPDVV----TCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYN 365
A R+ +++ S +V T N+++ LC KVE +F+L+ EM + G + S+
Sbjct: 901 ALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 366 IFIKGLFENGKVEEAMNIWELL 387
IKGLF N K+ EA+ + + +
Sbjct: 959 SLIKGLFRNSKISEALLLLDFI 980
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 177/448 (39%), Gaps = 50/448 (11%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
SE + + +L+ A+ P ++ F R G + +N+L++ + + E+F
Sbjct: 131 SESLVIEVLRLIAR---PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEF 187
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
E NVL++ C+ F A L + RP + +Y LI A K
Sbjct: 188 LQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLK 247
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
L++A + EMS + D K G + +A + E E P+ V
Sbjct: 248 ADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE----TENFVPDTV 303
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
Y +I GL F E+++ RM+ +V TYS+L+ G L +RV M
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNI----------- 366
+ P N++++ C G +++L ++M + G + YNI
Sbjct: 364 MMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDS 423
Query: 367 ------------------------------FIKGLFENGKVEEAMNIWELLLGETALAVD 396
F + L GK E+A ++ ++G+ + D
Sbjct: 424 LNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP-D 482
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
++TY +++ LC + A + EE + G DV+ Y+ M+++ CK ++ A +
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 457 LMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
M + GC N LI ++K ++
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVS 570
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 213/407 (52%), Gaps = 7/407 (1%)
Query: 78 CSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C DV L+ A D A +F KM + +P ++ +LL+ F+ + +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
++F++ + G P+V T+ +L+ LCK F +A L M G+ P+ +Y TLI
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+ L+ ALE+F M GV+P Y + ID + KSGD + A E +E+ ++ + + P
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK-MKTKGIAP 466
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
N+V+ N + L++ GR E+ +I+ +K D TY+ ++ S++G +D A ++
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFEN 374
+M+ PDV+ N+++N L K +V+E+++++ M + + V++YN + GL +N
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
GK++EA+ ++E ++ + ++ T+ L LCKN + AL++L + G DVF
Sbjct: 587 GKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
Y+++I L K ++ +A M K +C L+ G +K S
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT-LLPGVVKAS 691
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 205/409 (50%), Gaps = 4/409 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ KR D + L ++M+ G +P V +F + + + A + D
Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEME-TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+V TY VLI LC R+ + AK + M +PD+ +Y TL++ + DL++
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
+ + EM + G PDV+ + +++D K+G+F +A + + ++R++ + PN+ +YN +I
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD-VMRDQGILPNLHTYNTLI 405
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL R R ++LE++ M+ K +TY I + G+ A ++ M + ++
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P++V CNA L L K G+ E+ +++ + G + ++YN+ +K + G+++EA+ +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ E D LI+ L K +++A ++ + V Y++++ L
Sbjct: 526 LSEMM-ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
K ++ +A + M ++GC NT N L D KN +TL K L K
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 168/323 (52%), Gaps = 1/323 (0%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV P + TYN+LI L + E A+ + + G PD +Y L++A K G ++
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E++ EMS E + + +N++I G K+G+ A +++ L+ + P +Y +I
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GLS+ GR E+ +++E M + + Y+ LI+G + G D A ++K M+ V P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
D+ T + +++ LC G+V+E ++E+ +SG + +V+ YN+ I GL ++ ++EEA+ ++
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + D TY LI L G + +A ++ E + G + +VF ++++I
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 445 ERRLDDAAGVVSLMDKRGCKLNT 467
+ + A V M G NT
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNT 1102
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 202/438 (46%), Gaps = 42/438 (9%)
Query: 78 CSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C DV + +L+ K DEA +F +M + +P V ++N+LL + + + A
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+ F G PN T+N L LCK E A +L M +G PD F+Y T+I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG----------DFL------K 239
K G + A+ F +M ++ V PD + ++ G K+ +FL
Sbjct: 653 LVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 240 ANEMWERLLRE---ETVFPNVVSYN--VMIRGLSRCG---------------RFSESLEI 279
AN WE L+ E N VS++ ++ G+ R G S + +
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 280 WERMKKN-ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
+E+ K+ + + TY+ LI GL + ++ AQ V+ + PDV T N +L+
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 339 KWGKVEESFELWEEMG-QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K GK++E FEL++EM N I++NI I GL + G V++A++++ L+ + + +
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
TYG LI GL K+G L +A Q+ E G + Y+ +IN K D A +
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 458 MDKRGCKLNTHVCNPLID 475
M K G + + + L+D
Sbjct: 952 MVKEGVRPDLKTYSVLVD 969
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 205/462 (44%), Gaps = 80/462 (17%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D+AL LF M+ + G +P ++ ++ + S A + F T G++PN+ N
Sbjct: 415 DDALELFGNMESL-GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+ L K +AK + + +GL PD +Y ++ +K G+++ A+++ EM E G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR--EETVFPNVVSYNVMIRGLSRCGRFS 274
EPDV+ N +I+ +K+ + +E W+ +R E + P VV+YN ++ GL + G+
Sbjct: 534 CEPDVIVVNSLINTLYKAD---RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 275 ESLEIWERMK-------------------KNERKH----------------DVFTYSSLI 299
E++E++E M KN+ DVFTY+++I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL---------- 349
GL + G + A + M + V PD VT +L G+ K +E+++++
Sbjct: 651 FGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD 709
Query: 350 ------WEE-----MGQSGSRNVISYN--IFIKGLFENG---------------KVEEAM 381
WE+ + ++G N +S++ + G+ +G V A
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++E + + TY +LI GL + + A V + + G DV Y+ +++A
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
K ++D+ + M C+ NT N +I G +K N+
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 5/368 (1%)
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C + + + +++ K + A LF K + G +P + ++N L+ ++ E A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+ F + G P+V TYN L+ K + ++ L + MS + ++ +I+
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 196 AAKRGDLNAALEV-FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
K G+++ AL++ +D MS+R P Y +IDG KSG +A +++E +L +
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCR 923
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
PN YN++I G + G + +++RM K + D+ TYS L+ L +G +D
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--SRNVISYNIFIKGLF 372
+K++ ++PDVV N ++NGL K ++EE+ L+ EM S + ++ +YN I L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
G VEEA I+ + L + T+ LI G +G A V + G +
Sbjct: 1044 IAGMVEEAGKIYN-EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Query: 433 FAYSSMIN 440
Y + N
Sbjct: 1103 GTYEQLPN 1110
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ K +EAL LF +M G P + ++NSL+ ++ E A K + A
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
G+ PNV T+N LI+ + E A + + M G P+ +Y L N A
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNRA 1112
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 188/374 (50%), Gaps = 3/374 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC+P R++ L+ A ++A F G PNV TY VLI LC+ + E+A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
G+ R M + P +Y LIN K G + A E+ M +R +P+V +N +++G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ G KA + +R+L + + P++VSYNV+I GL R G + + ++ M + +
Sbjct: 416 LCRVGKPYKAVHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D T++++I+ + G D A M+ + +S D VT +++G+CK GK ++ +
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 351 EEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
E + + S N+ + L + KV+E + + + + L TY L+ GL +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG-KINKLGLVPSVVTYTTLVDGLIR 593
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+G + + ++LE + G +V+ Y+ +IN LC+ R+++A ++S M G N
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 470 CNPLIDGFIKNSNL 483
++ G++ N L
Sbjct: 654 YTVMVKGYVNNGKL 667
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 226/475 (47%), Gaps = 22/475 (4%)
Query: 7 PLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHI 66
P ++++L +S+ + ++ F +H Y +L+ + S I
Sbjct: 69 PNVASQVISLQRSDNDI--CVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI 126
Query: 67 IGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
+ I+ C E L L+ F ++ VFG R ++SLL +
Sbjct: 127 VALIKECSRC---EKEMLKLMYC-------------FDELREVFGFRLNYPCYSSLLMSL 170
Query: 127 AVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK 186
A + A + + G + Y ++ LCK E A+ + + +G D
Sbjct: 171 AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDS 230
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMS-ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+L+ + +L AL+VFD MS E P+ + Y+++I G + G +A + +
Sbjct: 231 HIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+ + E+ P+ +Y V+I+ L G ++ +++ M K +V TY+ LI GL +
Sbjct: 291 Q-MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISY 364
G ++ A V + M+ R+ P V+T NA++NG CK G+V +FEL M + + NV ++
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
N ++GL GK +A+++ + +L + L+ D +Y +LI GLC+ G++N A ++L
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRML-DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ D ++++INA CK+ + D A+ + LM ++G L+ LIDG K
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 187/412 (45%), Gaps = 9/412 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL + AK + A +R+M+ G G+ + +++NA + E AE F +
Sbjct: 165 SLLMSLAKLDLGFLAYVTYRRME-ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK 223
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG-VGLRPDKFSYGTLINAAAKRGDLN 203
G + L+ C+ A + MS V P+ SY LI+ + G L
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE 283
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A + D+M E+G +P Y ++I G KA +++ ++ PNV +Y V+
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYTVL 342
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I GL R G+ E+ + +M K+ V TY++LI+G + G + A + M R
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
P+V T N ++ GLC+ GK ++ L + M +G S +++SYN+ I GL G + A
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA-- 460
Query: 383 IWELLLGETALAV--DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
++LL + D T+ +I+ CK G + A L +G +D +++I+
Sbjct: 461 -YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
+CK + DA ++ + K H N ++D K + LGK
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 176/415 (42%), Gaps = 60/415 (14%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K A L M++ C+P VR+FN L+ + +A
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+SP++ +YNVLI LC++ A LL M+ + PD ++ +INA K+G + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR---------------- 249
M +G+ D + +IDG K G A + E L++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 250 --------EET----------VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
EE + P+VV+Y ++ GL R G + S I E MK + +
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
V+ Y+ +I+GL Q G ++ A+++ M VSP+ VT M+ G GK++ + E
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 352 EMGQSGSR-NVISYNIFIKGLFENGKV---EEAMNIWELLLGETALAVDSTTYGILIHGL 407
M + G N Y+ ++G + K E + ++ L ET
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET---------------- 719
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+N+ + V+E+ + +F ++ LCKE R D++ +V + +RG
Sbjct: 720 -DPECINELISVVEQLGGCISGLCIF----LVTRLCKEGRTDESNDLVQNVLERG 769
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 178/433 (41%), Gaps = 56/433 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ + + A L M+ F P +F +++NAF + + A F
Sbjct: 446 VLIDGLCREGHMNTAYKLLSSMN-CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKA---------------------------KG----- 172
G+S + T LI +CK + A KG
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 173 ---LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
+L ++ +GL P +Y TL++ + GD+ + + + M G P+V Y +II+
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
G + G +A ++ + ++ V PN V+Y VM++G G+ +LE M + +
Sbjct: 625 GLCQFGRVEEAEKLLSAM-QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 290 HDVFTYSSLIHG--LSQMGNLDGAQRVYKDMIGRRVSPDVVT----------------CN 331
+ YSSL+ G LSQ G + + D+ R P+ + C
Sbjct: 684 LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCI 743
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
++ LCK G+ +ES +L + + + G + +I ++ K + M + L+L ++
Sbjct: 744 FLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVL-KS 802
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
++ ++I GL K G +A +++ E G V+ + + L + D
Sbjct: 803 GFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDC 862
Query: 452 AGVVSLMDKRGCK 464
+ V+ L+D+ C+
Sbjct: 863 SEVIDLVDQLHCR 875
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 206/439 (46%), Gaps = 47/439 (10%)
Query: 79 SEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
S DV L T + A+ K +EA+ LF KM+ G P V +FN++++ + +++ A
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
F G+ P + TY++L+K L + + A +L+ M+ G P+ Y LI++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE------ 250
+ G LN A+E+ D M +G+ YN +I G+ K+G A ERLL+E
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA----ERLLKEMLSIGF 431
Query: 251 ---ETVFPNVVS-----------------------------YNVMIRGLSRCGRFSESLE 278
+ F +V+ +I GL + G+ S++LE
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
+W + D T ++L+HGL + G LD A R+ K+++GR D V+ N +++G C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K++E+F +EM + G + + +Y+I I GLF KVEEA+ W+ + D
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD-DCKRNGMLPDV 610
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
TY ++I G CK + + +E + + Y+ +I A C+ RL A +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 458 MDKRGCKLNTHVCNPLIDG 476
M +G N+ LI G
Sbjct: 671 MKHKGISPNSATYTSLIKG 689
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 38/411 (9%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V F + +NAF + E A K F+ + AGV+PNV T+N +I L +++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
M G+ P +Y L+ + + A V EM+++G P+V+ YN +ID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F ++G KA E+ + L+ + + +YN +I+G + G+ + + + M
Sbjct: 375 FIEAGSLNKAIEIKD-LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP------------------------- 325
+ +++S+I L D A R +M+ R +SP
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 326 ----------DVVTCNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFEN 374
D T NA+L+GLC+ GK++E+F + +E +G+ + +SYN I G
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
K++EA + ++ + L D+ TY ILI GL + +A+Q ++ + G DV+
Sbjct: 554 KKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
YS MI+ CK R ++ M + + NT V N LI + ++ L++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 177/342 (51%), Gaps = 10/342 (2%)
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
F G+ P+ T N+L+ L + EF+K + G+ PD + + T INA K
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCK 272
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
G + A+++F +M E GV P+V+ +N +IDG G + +A E+++ E + P ++
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV-ERGMEPTLI 331
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+Y+++++GL+R R ++ + + M K +V Y++LI + G+L+ A + M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKV 377
+ + +S T N ++ G CK G+ + + L +EM G + N S+ I L +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 378 EEAMNIWELLLGETALAVDSTTYGIL---IHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
+ A+ +GE L S G+L I GLCK+G +KAL++ + ++G VD
Sbjct: 452 DSALR----FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+++++ LC+ +LD+A + + RGC ++ N LI G
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 14/410 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRV-FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
TL+K Y K D A L ++M + F G SF S++ ++ A +F
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML 462
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+SP LI LCK + KA L G D + L++ + G L+
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFF--KSGD--FLKANEMWERLLREETVFPNVVS 259
A + E+ RG D + YN +I G K D F+ +EM +R L+ P+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-----PDNYT 577
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y+++I GL + E+++ W+ K+N DV+TYS +I G + + Q + +M+
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ V P+ V N ++ C+ G++ + EL E+M G S N +Y IKG+ +VE
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA ++E + E L + Y LI G K G + K +L E + + Y+ M
Sbjct: 698 EAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
I ++ + +A+ +++ M ++G ++ I G++K + FK
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 171/343 (49%), Gaps = 6/343 (1%)
Query: 85 TLLKAYAKRSMPDEALNL-FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
TL+ K +AL L F+ +++ G R+ N+LL+ + + + A +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G + +YN LI C K++ ++A L M GL+PD ++Y LI +
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A++ +D+ G+ PDV Y+++IDG K+ + E ++ ++ + V PN V YN +
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHL 651
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
IR R GR S +LE+ E MK + TY+SLI G+S + ++ A+ ++++M +
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMN 382
P+V A+++G K G++ + L EM ++ N I+Y + I G +G V EA
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
+ + E + DS TY I+G K G + +A + +E +
Sbjct: 772 LLNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENY 813
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 153/300 (51%), Gaps = 8/300 (2%)
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
KR AL+VF ++ +G+ P N+++ ++ +F K E ++ + + V P+V
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDV 260
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+ I + G+ E+++++ +M++ +V T++++I GL G D A +
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGK 376
M+ R + P ++T + ++ GL + ++ +++ + +EM + G NVI YN I E G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+ +A+ I +L++ + L++ S+TY LI G CKNG + A ++L+E G +V+ +++
Sbjct: 381 LNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN----LTLLFKSLGK 492
S+I LC D A V M R + LI G K+ L L F+ L K
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 206/439 (46%), Gaps = 47/439 (10%)
Query: 79 SEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
S DV L T + A+ K +EA+ LF KM+ G P V +FN++++ + +++ A
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
F G+ P + TY++L+K L + + A +L+ M+ G P+ Y LI++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE------ 250
+ G LN A+E+ D M +G+ YN +I G+ K+G A ERLL+E
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA----ERLLKEMLSIGF 431
Query: 251 ---ETVFPNVVS-----------------------------YNVMIRGLSRCGRFSESLE 278
+ F +V+ +I GL + G+ S++LE
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
+W + D T ++L+HGL + G LD A R+ K+++GR D V+ N +++G C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K++E+F +EM + G + + +Y+I I GLF KVEEA+ W+ + D
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD-DCKRNGMLPDV 610
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
TY ++I G CK + + +E + + Y+ +I A C+ RL A +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 458 MDKRGCKLNTHVCNPLIDG 476
M +G N+ LI G
Sbjct: 671 MKHKGISPNSATYTSLIKG 689
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 38/411 (9%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V F + +NAF + E A K F+ + AGV+PNV T+N +I L +++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
M G+ P +Y L+ + + A V EM+++G P+V+ YN +ID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F ++G KA E+ + L+ + + +YN +I+G + G+ + + + M
Sbjct: 375 FIEAGSLNKAIEIKD-LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP------------------------- 325
+ +++S+I L D A R +M+ R +SP
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 326 ----------DVVTCNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFEN 374
D T NA+L+GLC+ GK++E+F + +E +G+ + +SYN I G
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
K++EA + ++ + L D+ TY ILI GL + +A+Q ++ + G DV+
Sbjct: 554 KKLDEAFMFLDEMV-KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
YS MI+ CK R ++ M + + NT V N LI + ++ L++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 177/342 (51%), Gaps = 10/342 (2%)
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
F G+ P+ T N+L+ L + EF+K + G+ PD + + T INA K
Sbjct: 214 FPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCK 272
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
G + A+++F +M E GV P+V+ +N +IDG G + +A E+++ E + P ++
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV-ERGMEPTLI 331
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+Y+++++GL+R R ++ + + M K +V Y++LI + G+L+ A + M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKV 377
+ + +S T N ++ G CK G+ + + L +EM G + N S+ I L +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 378 EEAMNIWELLLGETALAVDSTTYGIL---IHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
+ A+ +GE L S G+L I GLCK+G +KAL++ + ++G VD
Sbjct: 452 DSALR----FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+++++ LC+ +LD+A + + RGC ++ N LI G
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 14/410 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRV-FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
TL+K Y K D A L ++M + F G SF S++ ++ A +F
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML 462
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+SP LI LCK + KA L G D + L++ + G L+
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFF--KSGD--FLKANEMWERLLREETVFPNVVS 259
A + E+ RG D + YN +I G K D F+ +EM +R L+ P+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-----PDNYT 577
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y+++I GL + E+++ W+ K+N DV+TYS +I G + + Q + +M+
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ V P+ V N ++ C+ G++ + EL E+M G S N +Y IKG+ +VE
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA ++E + E L + Y LI G K G + K +L E + + Y+ M
Sbjct: 698 EAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
I ++ + +A+ +++ M ++G ++ I G++K + FK
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 171/343 (49%), Gaps = 6/343 (1%)
Query: 85 TLLKAYAKRSMPDEALNL-FRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
TL+ K +AL L F+ +++ G R+ N+LL+ + + + A +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G + +YN LI C K++ ++A L M GL+PD ++Y LI +
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A++ +D+ G+ PDV Y+++IDG K+ + E ++ ++ + V PN V YN +
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHL 651
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
IR R GR S +LE+ E MK + TY+SLI G+S + ++ A+ ++++M +
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMN 382
P+V A+++G K G++ + L EM ++ N I+Y + I G +G V EA
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
+ + E + DS TY I+G K G + +A + +E +
Sbjct: 772 LLNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENY 813
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 153/300 (51%), Gaps = 8/300 (2%)
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
KR AL+VF ++ +G+ P N+++ ++ +F K E ++ + + V P+V
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDV 260
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+ I + G+ E+++++ +M++ +V T++++I GL G D A +
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGK 376
M+ R + P ++T + ++ GL + ++ +++ + +EM + G NVI YN I E G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+ +A+ I +L++ + L++ S+TY LI G CKNG + A ++L+E G +V+ +++
Sbjct: 381 LNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN----LTLLFKSLGK 492
S+I LC D A V M R + LI G K+ L L F+ L K
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 220/473 (46%), Gaps = 87/473 (18%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL-------NAFAVSEQWERAEKFF 139
L AY P AL +F+KM R+ +P + + N+LL ++F++S A + F
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSIS----SAREVF 192
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL-RWMSGVGLRPDKFSYGTLINAAAK 198
GVS NV+T+NVL+ C + + E A G+L R +S + PD +Y T++ A +K
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
+G L+ E+ +M + G+ P+ + YN ++ G+ K G +A ++ E L+++ V P++
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE-LMKQTNVLPDLC 311
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+YN++I GL G E LE+ + MK + + DV TY++LI G ++G A+++ + M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 319 ---------------------------IGRRV---------SPDVVTCNAMLNGLCKWGK 342
+ R+V SPD+VT + ++ K G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 343 VEESFELWEEMGQSGSR------------------------------------NVISYNI 366
+ + E+ EMGQ G + + ++Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I G F KVE+A+ +W+ + + + +T+ LI GLC +G A++ +E
Sbjct: 492 LIMGFFREEKVEKALEMWD-EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
G D ++S+I CKE R++ A + K K + + CN L++G K
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 239/549 (43%), Gaps = 99/549 (18%)
Query: 20 EKNPHSALQLFQHATR---HPGYTHSSAVLQHVLRRVASDPTLLPHAPHI------IGAI 70
E PH ALQ+FQ R P + +L ++R +S + A + IG
Sbjct: 144 EGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS--ISSAREVFDDMVKIGVS 201
Query: 71 EAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSE 130
Q N L+ Y ++AL + +M F P ++N++L A +
Sbjct: 202 LNVQTFN-------VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 131 QWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
+ ++ G+ PN TYN L+ CK ++A ++ M + PD +Y
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER---- 246
LIN G + LE+ D M ++PDV+ YN +IDG F+ G L+A ++ E+
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 247 ---------------LLREET----------------VFPNVVSYNVMIRGLSRCGRFSE 275
L +EE P++V+Y+ +I+ + G S
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 276 SLEIWERMKKN------------------ERKHDV-----------------FTYSSLIH 300
+LE+ M + ERK D TY +LI
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-R 359
G + ++ A ++ +M +++P V T N+++ GLC GK E + E ++E+ +SG
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ- 418
+ ++N I G + G+VE+A + + + D+ T IL++GLCK G KAL
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKH-SFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 419 ---VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
++EE E VD Y++MI+A CK+++L +A ++S M+++G + + N I
Sbjct: 614 FNTLIEERE-----VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 476 GFIKNSNLT 484
+++ L+
Sbjct: 669 LLMEDGKLS 677
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 190/415 (45%), Gaps = 68/415 (16%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNA-FAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
E L L M + +P V ++N+L++ F + E A K + GV N T+N+
Sbjct: 328 EGLELMDAM-KSLKLQPDVVTYNTLIDGCFELGLSLE-ARKLMEQMENDGVKANQVTHNI 385
Query: 157 LIKVLCKKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
+K LCK+ + E ++ + + G PD +Y TLI A K GDL+ ALE+ EM ++
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 216 GVEPDVMCYNMIID-----------------------------------GFFKSGDFLKA 240
G++ + + N I+D GFF+ KA
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
EMW+ + ++ + P V ++N +I GL G+ ++E ++ + ++ D T++S+I
Sbjct: 506 LEMWDEM-KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
G + G ++ A Y + I PD TCN +LNGLCK G E++ + + + +
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD 624
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
++YN I ++ K++EA ++LL + E L D TY I L ++G L++ +
Sbjct: 625 TVTYNTMISAFCKDKKLKEA---YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 419 VLEEAEHRGG-----------------------DVDVFAYSSMINALCKERRLDD 450
+L++ + G + + AYS +I+ LC RL +
Sbjct: 682 LLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 179/339 (52%), Gaps = 4/339 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK-REFEKAKGLL 174
V +F++L++A+ S E A F G+ PN+ TYN +I K EF++
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
M G++PD+ ++ +L+ ++ G AA +FDEM+ R +E DV YN ++D K
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G A E+ ++ + + PNVVSY+ +I G ++ GRF E+L ++ M+ D +
Sbjct: 388 GQMDLAFEILAQMPVKR-IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
Y++L+ +++G + A + ++M + DVVT NA+L G K GK +E +++ EM
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 355 QSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+ N+++Y+ I G + G +EAM I+ L D Y LI LCKNG +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALIDALCKNGLV 565
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
A+ +++E G +V Y+S+I+A + +D +A
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 199/361 (55%), Gaps = 12/361 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSE-QWERAEKFFAYFDT 144
L+ AY + + +EA+++F M + +G RP + ++N++++A ++++ KFF
Sbjct: 274 LISAYGRSGLHEEAISVFNSM-KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV P+ T+N L+ V + +E A+ L M+ + D FSY TL++A K G ++
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A E+ +M + + P+V+ Y+ +IDGF K+G F +A ++ +R + + VSYN ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-MRYLGIALDRVSYNTLL 451
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
++ GR E+L+I M K DV TY++L+ G + G D ++V+ +M V
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P+++T + +++G K G +E+ E++ E +G R +V+ Y+ I L +NG V A+++
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + E ++ + TY +I ++ ++++ A++ G F+ SS ++AL
Sbjct: 572 IDEMTKE-GISPNVVTYNSIIDAFGRSATMDRS------ADYSNGGSLPFS-SSALSALT 623
Query: 444 K 444
+
Sbjct: 624 E 624
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 4/351 (1%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A++ F G V ++ LI + E+A + M GLRP+ +Y +I+
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 195 AAAKRG-DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
A K G + + FDEM GV+PD + +N ++ + G + A +++ + +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-I 370
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
+V SYN ++ + + G+ + EI +M +V +YS++I G ++ G D A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLF 372
++ +M ++ D V+ N +L+ K G+ EE+ ++ EM G ++V++YN + G
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
+ GK +E ++ + E L + TY LI G K G +A+++ E + G DV
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLP-NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
YS++I+ALCK + A ++ M K G N N +ID F +++ +
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 141/264 (53%), Gaps = 6/264 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMD--RVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
+LL ++ + + A NLF +M R+ V S+N+LL+A Q + A + A
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRI---EQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
+ PNV +Y+ +I K F++A L M +G+ D+ SY TL++ K G
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
AL++ EM+ G++ DV+ YN ++ G+ K G + + +++ + RE V PN+++Y+
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYST 519
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
+I G S+ G + E++EI+ K + DV YS+LI L + G + A + +M
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 323 VSPDVVTCNAMLNGLCKWGKVEES 346
+SP+VVT N++++ + ++ S
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 210/479 (43%), Gaps = 20/479 (4%)
Query: 14 LNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAA 73
L KS+ + + + AT + T + H +S P P + + A
Sbjct: 55 LQTPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNHRPYGASSSPRGSAPPPSSVATVAPA 114
Query: 74 QNCNCSEDVPLTLLKA------YAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
Q PL K+ +RS + F + R + ++L NA
Sbjct: 115 QLSQPPNFSPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAID 174
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
S E F++ + TY +I+ L + E +KA G + R ++
Sbjct: 175 FSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQ 232
Query: 188 S--YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+I+ + G + A +F+ G V ++ +I + +SG +A ++
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCG-RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
++E + PN+V+YN +I + G F + + ++ M++N + D T++SL+ S+
Sbjct: 293 S-MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVIS 363
G + A+ ++ +M RR+ DV + N +L+ +CK G+++ +FE+ +M + NV+S
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGET---ALAVDSTTYGILIHGLCKNGYLNKALQVL 420
Y+ I G + G+ +EA+N L GE +A+D +Y L+ K G +AL +L
Sbjct: 412 YSTVIDGFAKAGRFDEALN----LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
E G DV Y++++ K+ + D+ V + M + N + LIDG+ K
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL Y K+ DE +F +M R P + ++++L++ ++ ++ A + F F +A
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL--- 202
G+ +V Y+ LI LCK A L+ M+ G+ P+ +Y ++I+A + +
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Query: 203 ------------------------NAALEVFDEMSE-------RGVEPDVMCYNMIIDGF 231
N +++F +++ + E + + I++ F
Sbjct: 604 ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
R + + + PNVV+++ ++ SRC F ++ + E ++ + K
Sbjct: 664 --------------RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNK-- 707
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++HGL MG + + + + D T +A N L
Sbjct: 708 ---VYGVVHGL-LMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALT 750
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 200/404 (49%), Gaps = 11/404 (2%)
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRV-FGCRPGVRSFNSLLNAFAVSEQW 132
+N SE L+ ++K +EA M R F P SFN L+ + +
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP--YSFNPLIEGYCKQGLF 324
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+ A AG+ P TYN+ I LC + A+ LL M+ PD SY TL
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTL 380
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
++ K G A +FD++ + P ++ YN +IDG +SG+ A + E + +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM-TTQL 439
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
+FP+V++Y +++G + G S + E+++ M + K D + Y++ G ++G+ D A
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 313 RVYKDMIGR-RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKG 370
R++++M+ +PD+ N ++GLCK G + ++ E ++ + G + ++Y I+G
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
ENG+ + A N+++ +L L TY +LI+G K G L +A Q E + RG
Sbjct: 560 YLENGQFKMARNLYDEML-RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
+V +++++ +CK +D+A + M++ G N + LI
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 179/377 (47%), Gaps = 8/377 (2%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
++N L+N F+ + + E A +F +G + ++N LI+ CK+ F+ A G+ M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G+ P +Y I A G ++ A E+ M+ PDV+ YN ++ G+ K G F
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
++A+ +++ L R + P++V+YN +I GL G + + E M DV TY++
Sbjct: 391 VEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
L+ G + GNL A VY +M+ + + PD G + G +++F L EEM +
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 358 --SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
+ ++ YN+ I GL + G + +A+ + L D TY +I G +NG
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF-RVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
A + +E + V Y +I K RL+ A + M KRG + N N L+
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 476 GFIKNSNLTLLFKSLGK 492
G K N+ ++ L K
Sbjct: 629 GMCKAGNIDEAYRYLCK 645
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 171/333 (51%), Gaps = 2/333 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V S+N+L++ + ++ A F + P++ TYN LI LC+ E A+ L
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M+ + PD +Y TL+ K G+L+ A EV+DEM +G++PD Y G +
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
GD KA + E ++ + P++ YNV I GL + G +++E ++ + D
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY+++I G + G A+ +Y +M+ +R+ P V+T ++ G K G++E++F+ EM
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ G R NV+++N + G+ + G ++EA + + E + + +Y +LI C
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYR-YLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+ +++ +E + + D + + ++ L K+
Sbjct: 671 WEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 168/361 (46%), Gaps = 23/361 (6%)
Query: 135 AEKFFAYFDT---AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
AEKF F+ G P+V N+++KVL R KA + M G+ P ++ T
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++++ K GDL +++ EM R +E + YN++I+GF K+G +A + R
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 252 -TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
V P S+N +I G + G F ++ + + M TY+ I L G +D
Sbjct: 304 FAVTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIK 369
A+ + M +PDVV+ N +++G K GK E+ L++++ ++++YN I
Sbjct: 362 ARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD 429
GL E+G +E A + E + + D TY L+ G KNG L+ A +V +E +G
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFP-DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 430 VDVFAYSSMINALCKERRLDDAAGVVSL------MDKRGCKLNTHVCNPLIDGFIKNSNL 483
D +AY++ E RL D+ L D L + N IDG K NL
Sbjct: 477 PDGYAYTT---RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY--NVRIDGLCKVGNL 531
Query: 484 T 484
Sbjct: 532 V 532
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 188/360 (52%), Gaps = 25/360 (6%)
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
KF AY + G +P+ ++N ++ +CK + + A+ ++ M G PD SY +LI+
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 197 AKRGDLNAALEVFDEM-SERG--VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
+ GD+ +A V + + + G +PD++ +N + +GF K ++L E V
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM-----------KMLDEVFV 150
Query: 254 F---------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+ PNVV+Y+ I + G +L+ + MK++ +V T++ LI G +
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
G+L+ A +YK+M R+S +VVT A+++G CK G+++ + E++ M + N +
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
Y I G F+ G + AM +L + + +D T YG++I GLC NG L +A +++E+
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
E D+ +++M+NA K R+ A + + +RG + + + +IDG KN L
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 202/423 (47%), Gaps = 10/423 (2%)
Query: 63 APHIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
A ++ ++ A+ C D+ +L ++K M DE M + C P V +++
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC--CSPNVVTYS 167
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
+ ++ F S + + A K F +SPNV T+ LI CK + E A L + M V
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
+ + +Y LI+ K+G++ A E++ M E VEP+ + Y IIDGFF+ GD A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
+ ++L + ++ +Y V+I GL G+ E+ EI E M+K++ D+ ++++++
Sbjct: 288 MKFLAKMLNQGMRL-DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
+ G + A +Y +I R PDVV + M++G+ K G++ E+ + N
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIEKAN 402
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ Y + I L + G E ++ + E L D Y I GLCK G L A ++
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFS-KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
G +D+ AY+++I L + + +A V M G ++ V + LI + K
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 481 SNL 483
N+
Sbjct: 522 GNM 524
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 182/406 (44%), Gaps = 45/406 (11%)
Query: 110 FGCRPGVRSFNSLLN----------AFAVSEQWERAEKFFA------------------- 140
FGC P V S+NSL++ A V E + F
Sbjct: 85 FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144
Query: 141 ---YFDTAGV-----SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
F GV SPNV TY+ I CK E + A M L P+ ++ L
Sbjct: 145 LDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I+ K GDL A+ ++ EM + +V+ Y +IDGF K G+ +A EM+ R++ E+
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV-EDR 263
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
V PN + Y +I G + G +++ +M + D+ Y +I GL G L A
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGL 371
+ +DM + PD+V M+N K G+++ + ++ ++ + G +V++ + I G+
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+NG++ EA+ + + E A + Y +LI LCK G + ++ + G D
Sbjct: 384 AKNGQLHEAIVYFCI---EKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
F Y+S I LCK+ L DA + + M + G L+ LI G
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 45/416 (10%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P SFNS+++ Q + AE G P+V +YN LI C+ + A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 171 KGLLRWMS----------------------------------GVGLR---PDKFSYGTLI 193
+L + GV L+ P+ +Y T I
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 194 NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
+ K G+L AL+ F M + P+V+ + +IDG+ K+GD A +++ + R
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
NVV+Y +I G + G + E++ RM ++ + + Y+++I G Q G+ D A +
Sbjct: 231 L-NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLF 372
M+ + + D+ +++GLC GK++E+ E+ E+M +S +++ + + F
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
++G+++ A+N++ L+ E D +I G+ KNG L++A+ + DV
Sbjct: 350 KSGRMKAAVNMYHKLI-ERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKANDV-- 404
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
Y+ +I+ALCKE + + S + + G + + I G K NL FK
Sbjct: 405 -MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 173/343 (50%), Gaps = 9/343 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K + A++L+++M RV V ++ +L++ F + +RAE+ ++
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRV-RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
V PN Y +I ++ + + A L M G+R D +YG +I+ G L A
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E+ ++M + + PD++ + +++ +FKSG A M+ +L+ E P+VV+ + MI
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI-ERGFEPDVVALSTMID 381
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+++ G+ E++ + K N+ Y+ LI L + G+ +R++ + + P
Sbjct: 382 GIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D + + GLCK G + ++F+L M Q G ++++Y I GL G + EA ++
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ +L + ++ DS + +LI K G + A +L + + RG
Sbjct: 497 DEMLN-SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 36/310 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
L+ + K+ A ++ +M DRV P + ++++ F + A KF A
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRV---EPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ ++ Y V+I LC + ++A ++ M L PD + T++NA K G +
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 204 AALEVFDEMSERGVEPDVMC------------------------------YNMIIDGFFK 233
AA+ ++ ++ ERG EPDV+ Y ++ID K
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
GDF++ ++ ++ E + P+ Y I GL + G ++ ++ RM + D+
Sbjct: 416 EGDFIEVERLFSKI-SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
Y++LI+GL+ G + A++V+ +M+ +SPD + ++ K G + + +L +M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 354 GQSGSRNVIS 363
+ G +S
Sbjct: 535 QRRGLVTAVS 544
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+ S+N ++ + + G+ + +I M + + DV +Y+SLI G + G++ A V
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 315 YKDMI---GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGL 371
+ + G PD+V+ N++ NG K ++E F M + S NV++Y+ +I
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTF 173
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
++G+++ A+ + + AL+ + T+ LI G CK G L A+ + +E ++
Sbjct: 174 CKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLG 491
V Y+++I+ CK+ + A + S M + + N+ V +IDGF + + K L
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 492 K 492
K
Sbjct: 293 K 293
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 4/362 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TLLK K M ++A N+ ++M + G P +F+ L + ++ +E+ E A +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+GV N T ++L+ LCK+ + EKA+ +L GL P++ Y T+I+ ++GDL
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + M ++G++PD + YN +I F + G+ A + + ++ + V P+V +YN++I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK-MKLKGVSPSVETYNILI 466
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G R F + +I + M+ N +V +Y +LI+ L + L AQ V +DM R VS
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P V N +++G C GK+E++F +EM + G N+++YN I GL GK+ EA ++
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
L + L D TY LI G G + + + + EE + G + Y +I+
Sbjct: 587 L-LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 444 KE 445
KE
Sbjct: 646 KE 647
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 210/418 (50%), Gaps = 7/418 (1%)
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
+ A I+G E A+ +E + T++ Y ++ A M++ G +P ++
Sbjct: 370 IEKAEEILGR-EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ-GMKPDHLAY 427
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N L+ F + E AEK GVSP+VETYN+LI +K EF+K +L+ M
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G P+ SYGTLIN K L A V +M +RGV P V YNM+IDG G
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A + +L+ + + N+V+YN +I GLS G+ SE+ ++ + + K DVFTY+SLI
Sbjct: 548 AFRFSKEMLK-KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
G GN+ +Y++M + P + T + +++ LC +E + L+ EM S
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM--SLKP 663
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
+++ YN + +G +E+A N+ + ++ E ++ +D TTY LI G K G L + +
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMI-EKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
++E R + + Y+ ++ C+ + A M ++G L+ + N L+ G
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 183/365 (50%), Gaps = 3/365 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + ++N+L++ + + E++ K + P++ T+N L+K L K E A+ +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L+ M +G PD F++ L + + AAL V++ + GV+ + +++++ K
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G KA E+ R + + V PN V YN MI G R G + E M+K K D
Sbjct: 367 EGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
Y+ LI ++G ++ A++ M + VSP V T N ++ G + + ++ F++ +EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+G+ NV+SY I L + K+ EA I + + + ++ Y +LI G C G
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
+ A + +E +G ++++ Y+++I+ L +L +A ++ + ++G K + N
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 473 LIDGF 477
LI G+
Sbjct: 605 LISGY 609
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 168/332 (50%), Gaps = 5/332 (1%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
+ P+V YNVLI LCK + A+ L M L P +Y TLI+ K G+ +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
+V + M +EP ++ +N ++ G FK+G A + + +++ P+ +++++ G
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE-MKDLGFVPDAFTFSILFDG 328
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
S + +L ++E + K + +T S L++ L + G ++ A+ + + + + P+
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA-MNIW 384
V N M++G C+ G + + E M + G + + ++YN I+ E G++E A +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++ L + +V+ TY ILI G + +K +L+E E G +V +Y ++IN LCK
Sbjct: 449 KMKLKGVSPSVE--TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+L +A V M+ RG + N LIDG
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 39/346 (11%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E A+ FFA G+ P+ ++ +L+ L K ++F + + RP KF YG
Sbjct: 127 EAADLFFA-LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I AA K D+ LE+F+ ++ +
Sbjct: 186 IQAAVKLSDVGKGLELFNR------------------------------------MKHDR 209
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
++P+V YNV+I GL + R +++ ++++ M + TY++LI G + GN + +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
+V + M + P ++T N +L GL K G VE++ + +EM G + +++I G
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
N K E A+ ++E + ++ + +++ T IL++ LCK G + KA ++L +G +
Sbjct: 330 SSNEKAEAALGVYETAV-DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
Y++MI+ C++ L A + M+K+G K + N LI F
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 35/301 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
TL+ K S EA + R M DR G P VR +N L++ + E A +F
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDR--GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ N+ TYN LI L + +A+ LL +S GL+PD F+Y +LI+ G++
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 204 AALEVFDEMSERGVEP-------------------------------DVMCYNMIIDGFF 232
+ +++EM G++P D++ YN ++ +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 233 KSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
GD KA + ++++ E+++ + +YN +I G + G+ E + + M E + +
Sbjct: 677 VHGDMEKAFNLQKQMI-EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
TY+ ++ G ++ + A Y++M + DV N +++GL + + +E+ + E
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 353 M 353
M
Sbjct: 796 M 796
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 192/358 (53%), Gaps = 7/358 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + K +A +F ++ + +P V SFN+L+N + + + + +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
P+V TY+ LI LCK+ + + A GL M GL P+ + TLI+ ++ G+++
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E + +M +G++PD++ YN +++GF K+GD + A + + ++R + P+ ++Y +I
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR-RGLRPDKITYTTLID 423
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G R G +LEI + M +N + D +S+L+ G+ + G + A+R ++M+ + P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIW 384
D VT M++ CK G + F+L +EM G +V++YN+ + GL + G+++ A +
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ +L + D TY L+ G + + N + + +++ E G D+ +Y S++N L
Sbjct: 544 DAML-NIGVVPDDITYNTLLEG--HHRHANSSKRYIQKPE-IGIVADLASYKSIVNEL 597
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 223/497 (44%), Gaps = 28/497 (5%)
Query: 8 LSPHRLLNLLKSEKNPHSALQ-----LFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPH 62
LS H +++L+ NP S Q F+ + PG+ + VL R + +
Sbjct: 80 LSVHHVVDLIN--HNPLSLPQRSIFAFFKFISSQPGFRFTVETY-FVLARFLAVHEMFTE 136
Query: 63 APHIIGAIEAAQNCNCSEDVPLTLLK----------------AYAKRSMPDEALNLFRKM 106
A +I + + + N + V ++L++ Y +A+ FR +
Sbjct: 137 AQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFR-L 195
Query: 107 DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKRE 166
R +R +LL+ F+ AG NV +N+L+ CK+
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 167 FEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNM 226
A+ + ++ L+P S+ TLIN K G+L+ + +M + PDV Y+
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 227 IIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+I+ K A+ +++ + + + PN V + +I G SR G E +++M
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLI-PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
+ D+ Y++L++G + G+L A+ + MI R + PD +T +++G C+ G VE +
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 347 FELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
E+ +EM Q+G + + ++ + G+ + G+V +A +L + D TY +++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML-RAGIKPDDVTYTMMMD 493
Query: 406 GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKL 465
CK G ++L+E + G V Y+ ++N LCK ++ +A ++ M G
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 466 NTHVCNPLIDGFIKNSN 482
+ N L++G +++N
Sbjct: 554 DDITYNTLLEGHHRHAN 570
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 158/302 (52%), Gaps = 3/302 (0%)
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
G L++ K + E+ + G +V +N++++ F K G+ A ++++ + +
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
++ P VVS+N +I G + G E + +M+K+ + DVFTYS+LI+ L + +D
Sbjct: 269 R-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFI 368
GA ++ +M R + P+ V +++G + G+++ E +++M G + +++ YN +
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G +NG + A NI + ++ L D TY LI G C+ G + AL++ +E + G
Sbjct: 388 NGFCKNGDLVAARNIVDGMI-RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
++D +S+++ +CKE R+ DA + M + G K + ++D F K + FK
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 489 SL 490
L
Sbjct: 507 LL 508
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
F +L+ + +G + A + ++ R + C +L+ + K + + E
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 353 MGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNG 411
+ +G NV +NI + + G + +A +++ + + +L ++ LI+G CK G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT-KRSLQPTVVSFNTLINGYCKVG 289
Query: 412 YLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCN 471
L++ ++ + E DVF YS++INALCKE ++D A G+ M KRG N +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 472 PLIDGFIKNSNLTLLFKSLGK 492
LI G +N + L+ +S K
Sbjct: 350 TLIHGHSRNGEIDLMKESYQK 370
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 6/413 (1%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
A+ + + +L+ AYA DEAL+ RKM G + +++ ++ F+ +
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE-GIEMSLVTYSVIVGGFSKAGHA 395
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E A+ +F + N Y +I C+ E+A+ L+R M G+ Y T+
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
++ D L VF + E G P V+ Y +I+ + K G KA E+ R+++EE
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEG 514
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
V N+ +Y++MI G + ++ + ++E M K K DV Y+++I MGN+D A
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGL 371
+ K+M R P T +++G K G + S E+++ M + G V ++N I GL
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 372 FENGKVEEAMNIW-ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
E ++E+A+ I E+ L ++ + TY ++ G G KA + ++ G DV
Sbjct: 635 VEKRQMEKAVEILDEMTLA--GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
D+F Y +++ A CK R+ A V M R N+ V N LIDG+ + ++
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 191/408 (46%), Gaps = 8/408 (1%)
Query: 81 DVPL----TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
D P+ T++ Y + + L +F+++ G P V ++ L+N + + +A
Sbjct: 446 DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC-GFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
+ GV N++TY+++I K +++ A + M G++PD Y +I+A
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
G+++ A++ EM + P + II G+ KSGD ++ E+++ ++R P
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD-MMRRCGCVPT 623
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
V ++N +I GL + +++EI + M + TY+ ++ G + +G+ A +
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENG 375
+ + D+ T A+L CK G+++ + + +EM ++ RN YNI I G G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
V EA ++ + + E + D TY I K G +N+A Q +EE E G ++ Y
Sbjct: 744 DVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+++I + + A M G K + V + L+ + +++
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 174/378 (46%), Gaps = 11/378 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K +AL + R M G + +++++ ++N F + W A F
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEE-GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P+V YN +I C ++A ++ M + RP ++ +I+ AK GD+ +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LEVFD M G P V +N +I+G + KA E+ + + V N +Y +++
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL-AGVSANEHTYTKIMQ 667
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + G ++ E + R++ D+FTY +L+ + G + A V K+M R +
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
+ N +++G + G V E+ +L ++M + G + ++ +Y FI + G + A
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 385 ELLLGETALAVDST--TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
E + AL V TY LI G + KAL EE + G D Y ++ +L
Sbjct: 788 EEM---EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Query: 443 CKERRLDDA---AGVVSL 457
+ +A +GV+++
Sbjct: 845 LSRASIAEAYIYSGVMTI 862
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 14/344 (4%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ A+ D A+ ++M ++ RP R+F +++ +A S R+ + F
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P V T+N LI L +KR+ EKA +L M+ G+ ++ +Y ++ A GD A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
E F + G++ D+ Y ++ KSG A + + + + N YN++I
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV-TKEMSARNIPRNSFVYNILID 737
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G +R G E+ ++ ++MKK K D+ TY+S I S+ G+++ A + ++M V P
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA---- 380
++ T ++ G + E++ +EEM G + + Y+ + L + EA
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 857
Query: 381 --MNIWELLLGETALAVDSTTYGILIHGLCK----NGYLNKALQ 418
M I + ++ E L VD T LCK G L + LQ
Sbjct: 858 GVMTICKEMV-EAGLIVDMGTAVHWSKCLCKIEASGGELTETLQ 900
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+ ++ YAK +L +F M R GC P V +FN L+N Q E+A +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRC-GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
AGVS N TY +++ + KA + GL D F+Y L+ A K G +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+AL V EMS R + + YN++IDG+ + GD +A ++ ++ +++E V P++ +Y
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ-MKKEGVKPDIHTYTSF 770
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I S+ G + + + E M+ K ++ TY++LI G ++ + A Y++M +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 324 SPDVVTCNAMLNGLCKWGKVEESF 347
PD + +L L + E++
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAY 854
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+P + +G ++ +RGD++ A E F+ M RG+ P Y +I + D +A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIW-ERMKKNERKHDVFTYSSLIHG 301
R ++EE + ++V+Y+V++ G S+ G +E+ + W + K+ + + Y +I+
Sbjct: 366 CV-RKMKEEGIEMSLVTYSVIVGGFSKAGH-AEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
Q N++ A+ + ++M + + + M++G ++ +++ + + G +
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
V++Y I + GK+ +A+ + ++ E + + TY ++I+G K A V
Sbjct: 484 VVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
E+ G DV Y+++I+A C +D A V M K + T P+I G+ K+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 481 SNL 483
++
Sbjct: 603 GDM 605
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 181/329 (55%), Gaps = 2/329 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V SFNS+++ + + A+ FF G+ P+V ++N+LI LC +A L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M+ G+ PD +Y L G ++ A EV +M ++G+ PDV+ Y +++ G +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G+ + + +L +++ +VM+ GL + GR E+L ++ +MK + D+
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
YS +IHGL ++G D A +Y +M +R+ P+ T A+L GLC+ G + E+ L + +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
SG + +++ YNI I G ++G +EEA+ ++++++ ET + T+ LI+G CK
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI-ETGITPSVATFNSLIYGYCKTQN 518
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINA 441
+ +A ++L+ + G V +Y+++++A
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 229/458 (50%), Gaps = 22/458 (4%)
Query: 32 HATRHPGYTHSSAVLQHVL---RRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTLLK 88
+A RH + S+ ++ HVL RR +L G ++ D+ L L
Sbjct: 78 YAFRHSSF--STLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFL-- 133
Query: 89 AYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ-WERAEKFFAYFDTAGV 147
++ M D++L + +KM + +S+NS+L F +++ W+ ++
Sbjct: 134 -SSRLRMVDDSLYILKKM-KDQNLNVSTQSYNSVLYHFRETDKMWDVYKEI--------K 183
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
N TY+ ++ LC++++ E A LR + P S+ ++++ K G ++ A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
F + + G+ P V +N++I+G G +A E+ + + V P+ V+YN++ +G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGF 302
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD- 326
G S + E+ M DV TY+ L+ G Q+GN+D + KDM+ R +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWE 385
++ C+ ML+GLCK G+++E+ L+ +M G S ++++Y+I I GL + GK + A+ +++
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+ + L +S T+G L+ GLC+ G L +A +L+ G +D+ Y+ +I+ K
Sbjct: 423 EMCDKRILP-NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 446 RRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+++A + ++ + G + N LI G+ K N+
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 178/385 (46%), Gaps = 22/385 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L K DEAL+LF +M + G P + +++ +++ +++ A +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ PN T+ L+ LC+K +A+ LL + G D Y +I+ AK G +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
ALE+F + E G+ P V +N +I G+ K+ + +A ++ + +++ + P+VVSY ++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLM 545
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA-----QRVY---- 315
+ CG E+ MK TYS + GL + + +R++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 316 ---KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV----ISYNIFI 368
+DM + PD +T N ++ LC+ + +F E M SRN+ +YNI I
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK---SRNLDASSATYNILI 662
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
L G + +A + + L E +++ Y LI C G A+++ + HRG
Sbjct: 663 DSLCVYGYIRKA-DSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 429 DVDVFAYSSMINALCKERRLDDAAG 453
+V + YS++IN LC+ ++ G
Sbjct: 722 NVSIRDYSAVINRLCRRHLMNCFPG 746
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 181/430 (42%), Gaps = 60/430 (13%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAF----AVSEQWERAEKFFAYFDTAGVSPNVET 153
EAL L M++ G P ++N L F +S WE G+SP+V T
Sbjct: 275 EALELASDMNK-HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML----DKGLSPDVIT 329
Query: 154 YNVLI------------------------------------KVLCKKREFEKAKGLLRWM 177
Y +L+ LCK ++A L M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
GL PD +Y +I+ K G + AL ++DEM ++ + P+ + ++ G + G
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 238 LKANEMWERLLRE-ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
L+A + + L+ ET+ ++V YN++I G ++ G E+LE+++ + + V T++
Sbjct: 450 LEARSLLDSLISSGETL--DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
SLI+G + N+ A+++ + ++P VV+ +++ G + EL EM
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 357 GSRNV-ISYNIFIKGLFENGKVEEAMNIWELLLGET-----------ALAVDSTTYGILI 404
G ++Y++ KGL K E ++ + E + D TY +I
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
LC+ +L+ A LE + R D Y+ +I++LC + A + + ++
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 465 LNTHVCNPLI 474
L+ LI
Sbjct: 688 LSKFAYTTLI 697
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 175/357 (49%), Gaps = 3/357 (0%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E+A+ F +G+ P + Y LI+ C+++ + LL M + ++YGT+
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
+ GDL+ A + EM G P+V+ Y +I F ++ F A + + + +E+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQG 482
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
+ P++ YN +I GLS+ R E+ M +N K + FTY + I G + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGL 371
+ K+M V P+ V C ++N CK GKV E+ + M G + +Y + + GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
F+N KV++A I+ + G+ +A D +YG+LI+G K G + KA + +E G +
Sbjct: 603 FKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
V Y+ ++ C+ ++ A ++ M +G N +IDG+ K+ +L F+
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 204/440 (46%), Gaps = 49/440 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ +K DEA + +M G +P ++ + ++ + + ++ A+K+
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 145 AGVSPN-----------------------------------VETYNVLIKVLCKKREFEK 169
GV PN +TY VL+ L K + +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A+ + R M G G+ PD FSYG LIN +K G++ A +FDEM E G+ P+V+ YNM++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
GF +SG+ KA E+ + + + + PN V+Y +I G + G +E+ +++ MK
Sbjct: 671 GFCRSGEIEKAKELLDE-MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
D F Y++L+ G ++ +++ A ++ + + NA++N + K+GK E E+
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 350 WEEM-----GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ + G N ++YNI I L + G +E A ++ + + TY L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT-VITYTSLL 847
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR--- 461
+G K G + V +EA G + D YS +INA KE A +V M +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 462 --GCKLNTHVCNPLIDGFIK 479
GCKL+ C L+ GF K
Sbjct: 908 DDGCKLSISTCRALLSGFAK 927
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 204/404 (50%), Gaps = 9/404 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++K D A N+ ++M GCRP V + +L+ F + ++ A +
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEM-IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++P++ YN LI L K + ++A+ L M GL+P+ F+YG I+ + + +
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + EM E GV P+ + +I+ + K G ++A + R + ++ + + +Y V++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY-RSMVDQGILGDAKTYTVLM 599
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL + + ++ EI+ M+ DVF+Y LI+G S++GN+ A ++ +M+ ++
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P+V+ N +L G C+ G++E++ EL +EM G N ++Y I G ++G + EA +
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
++ + L DS Y L+ G C+ + +A+ + +G ++++IN +
Sbjct: 720 FD-EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVF 777
Query: 444 KERRLDDAAGVVS-LMD---KRGCKLNTHVCNPLIDGFIKNSNL 483
K + + V++ LMD R K N N +ID K NL
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 203/427 (47%), Gaps = 44/427 (10%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
+K + ++A LF M G P +++ SL+ + + + + + +
Sbjct: 358 SKEGVMEKAKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
TY ++K +C + + A +++ M G RP+ Y TLI + A+ V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 211 EMSERGVEPDVMCYNMI-----------------------------------IDGFFKSG 235
EM E+G+ PD+ CYN + I G+ ++
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
+F A++ + + +RE V PN V +I + G+ E+ + M D TY
Sbjct: 537 EFASADK-YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ L++GL + +D A+ ++++M G+ ++PDV + ++NG K G ++++ +++EM +
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 356 SG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
G + NVI YN+ + G +G++E+A + + + L ++ TY +I G CK+G L
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLD-EMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM--DKRGCKLNTHVCNP 472
+A ++ +E + +G D F Y+++++ C RL+D +++ +K+GC +T N
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 473 LIDGFIK 479
LI+ K
Sbjct: 772 LINWVFK 778
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 171/347 (49%), Gaps = 14/347 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ K D+A +FR+M R G P V S+ L+N F+ ++A F
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++PNV YN+L+ C+ E EKAK LL MS GL P+ +Y T+I+ K GDL
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +FDEM +G+ PD Y ++DG + D +A ++ ++ + +N +I
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT--NKKGCASSTAPFNALI 773
Query: 265 RGLSRCGRFSESLEIWERMKKNE-----RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ + G+ E+ R+ + +DV TY+ +I L + GNL+ A+ ++ M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
+ P V+T ++LNG K G+ E F +++E +G + I Y++ I + G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 379 EAMNIWELLLGETAL----AVDSTTYGILIHGLCKNGYLNKALQVLE 421
+A+ + + + + A+ + +T L+ G K G + A +V+E
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 161/405 (39%), Gaps = 81/405 (20%)
Query: 156 VLIKVLCKKREFEKAKGL--LRWMSGVGLRPDKF-SYGTLINAAAKRGDLNAALEVFDEM 212
V++ VL KR + +K L W+ + K S+ L G AL V + M
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123
Query: 213 SER-------------------GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
ER G D + + ++ DG+ G +A ++ + E V
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELV 183
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI-----HGLSQMG-- 306
P + V++ L R R ++++ M + DV TY LI G Q+G
Sbjct: 184 -PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 307 --------------NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
N+DGA ++ + MI + + P T + +++GLCK ++E++ L E
Sbjct: 243 VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 353 MGQSG-SRNVISYNIFIKGLFEN-----------------------------------GK 376
M G S + +Y++ I GL + G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+E+A +++ ++ + L + Y LI G C+ + + ++L E + R + + Y
Sbjct: 363 MEKAKALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
+++ +C LD A +V M GC+ N + LI F++NS
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 181/329 (55%), Gaps = 2/329 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V SFNS+++ + + A+ FF G+ P+V ++N+LI LC +A L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M+ G+ PD +Y L G ++ A EV +M ++G+ PDV+ Y +++ G +
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G+ + + +L +++ +VM+ GL + GR E+L ++ +MK + D+
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
YS +IHGL ++G D A +Y +M +R+ P+ T A+L GLC+ G + E+ L + +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
SG + +++ YNI I G ++G +EEA+ ++++++ ET + T+ LI+G CK
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI-ETGITPSVATFNSLIYGYCKTQN 518
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINA 441
+ +A ++L+ + G V +Y+++++A
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 229/458 (50%), Gaps = 22/458 (4%)
Query: 32 HATRHPGYTHSSAVLQHVL---RRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTLLK 88
+A RH + S+ ++ HVL RR +L G ++ D+ L L
Sbjct: 78 YAFRHSSF--STLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFL-- 133
Query: 89 AYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ-WERAEKFFAYFDTAGV 147
++ M D++L + +KM + +S+NS+L F +++ W+ ++
Sbjct: 134 -SSRLRMVDDSLYILKKM-KDQNLNVSTQSYNSVLYHFRETDKMWDVYKEI--------K 183
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
N TY+ ++ LC++++ E A LR + P S+ ++++ K G ++ A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
F + + G+ P V +N++I+G G +A E+ + + V P+ V+YN++ +G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGF 302
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD- 326
G S + E+ M DV TY+ L+ G Q+GN+D + KDM+ R +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWE 385
++ C+ ML+GLCK G+++E+ L+ +M G S ++++Y+I I GL + GK + A+ +++
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+ + L +S T+G L+ GLC+ G L +A +L+ G +D+ Y+ +I+ K
Sbjct: 423 EMCDKRILP-NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 446 RRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+++A + ++ + G + N LI G+ K N+
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 178/385 (46%), Gaps = 22/385 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L K DEAL+LF +M + G P + +++ +++ +++ A +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ PN T+ L+ LC+K +A+ LL + G D Y +I+ AK G +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
ALE+F + E G+ P V +N +I G+ K+ + +A ++ + +++ + P+VVSY ++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLM 545
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA-----QRVY---- 315
+ CG E+ MK TYS + GL + + +R++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 316 ---KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV----ISYNIFI 368
+DM + PD +T N ++ LC+ + +F E M SRN+ +YNI I
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK---SRNLDASSATYNILI 662
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
L G + +A + + L E +++ Y LI C G A+++ + HRG
Sbjct: 663 DSLCVYGYIRKA-DSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 429 DVDVFAYSSMINALCKERRLDDAAG 453
+V + YS++IN LC+ ++ G
Sbjct: 722 NVSIRDYSAVINRLCRRHLMNCFPG 746
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 181/430 (42%), Gaps = 60/430 (13%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAF----AVSEQWERAEKFFAYFDTAGVSPNVET 153
EAL L M++ G P ++N L F +S WE G+SP+V T
Sbjct: 275 EALELASDMNK-HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML----DKGLSPDVIT 329
Query: 154 YNVLI------------------------------------KVLCKKREFEKAKGLLRWM 177
Y +L+ LCK ++A L M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
GL PD +Y +I+ K G + AL ++DEM ++ + P+ + ++ G + G
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 238 LKANEMWERLLRE-ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
L+A + + L+ ET+ ++V YN++I G ++ G E+LE+++ + + V T++
Sbjct: 450 LEARSLLDSLISSGETL--DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
SLI+G + N+ A+++ + ++P VV+ +++ G + EL EM
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 357 G-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET-----------ALAVDSTTYGILI 404
G ++Y++ KGL K E ++ + E + D TY +I
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 627
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
LC+ +L+ A LE + R D Y+ +I++LC + A + + ++
Sbjct: 628 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 687
Query: 465 LNTHVCNPLI 474
L+ LI
Sbjct: 688 LSKFAYTTLI 697
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 4/409 (0%)
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C E +L+ K D+A ++ KM CR + SL+ F + E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS-DCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
K + SP+++ N + + K E EK + + + PD SY LI+
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
K G N E+F M E+G D YN++IDGF K G KA ++ E + + + P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEP 620
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
VV+Y +I GL++ R E+ ++E K + +V YSSLI G ++G +D A +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFEN 374
++++ + ++P++ T N++L+ L K ++ E+ ++ M + + N ++Y I I GL +
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
K +A W+ + + + + +Y +I GL K G + +A + + + GG D
Sbjct: 741 RKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
Y++MI L R DA + +RG ++ C L+D KN L
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 73/465 (15%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL++ +AK D AL+L +M + + +N +++F + + A KFF +
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+ TY +I VLCK ++A + + P ++Y T+I G +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + + +G P V+ YN I+ K G +A +++E + ++ PN+ +YN++I
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILI 384
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
L R G+ + E+ + M+K +V T + ++ L + LD A ++++M + +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
PD +T ++++GL K G+V+++++++E+M S R N I Y IK F +G+ E+ I
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 384 WELLLGETA----------------------------------LAVDSTTYGILIHGL-- 407
++ ++ + D+ +Y ILIHGL
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 408 ---------------------------------CKNGYLNKALQVLEEAEHRGGDVDVFA 434
CK G +NKA Q+LEE + +G + V
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
Y S+I+ L K RLD+A + + +LN + + LIDGF K
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 218/481 (45%), Gaps = 20/481 (4%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLF---QHATRHPGYTHSSAVLQHVLRRVASDPTLLPH 62
KP P ++ +L+ K+ + A++ F + T P S L V+ R + L
Sbjct: 62 KP-QPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL--- 117
Query: 63 APHIIGAIEAA---QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
I+G + A + N ++ L +KA R D +M R F RP ++
Sbjct: 118 -DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVV-----QMMRKFKFRPAFSAY 171
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
+L+ AF+ + F G P V + LI+ K+ + A LL M
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
L D Y I++ K G ++ A + F E+ G++PD + Y +I K+ +
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A EM+E L + V P +YN MI G G+F E+ + ER + V Y+ ++
Sbjct: 292 AVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-S 358
L +MG +D A +V+++M + +P++ T N +++ LC+ GK++ +FEL + M ++G
Sbjct: 351 TCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
NV + NI + L ++ K++EA ++E + D T+ LI GL K G ++ A +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFE-EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
V E+ + Y+S+I R +D + M + C + + N +D
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 479 K 479
K
Sbjct: 529 K 529
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 192/389 (49%), Gaps = 9/389 (2%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
DEA +F +MD C P +F SL++ + + A K + + N Y
Sbjct: 429 DEACAMFEEMDYKV-CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LIK E + + M PD T ++ K G+ +F+E+ R
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFS 274
PD Y+++I G K+G ANE +E ++E+ + +YN++I G +CG+ +
Sbjct: 548 FVPDARSYSILIHGLIKAG---FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
++ ++ E MK + V TY S+I GL+++ LD A ++++ +R+ +VV ++++
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 335 NGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+G K G+++E++ + EE+ Q G + N+ ++N + L + ++ EA+ ++ + E
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ-SMKELKC 723
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
+ TYGILI+GLCK NKA +E + +G +Y++MI+ L K + +A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+ G ++ N +I+G + N N
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEG-LSNGN 811
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ + K ++A L +M + G P V ++ S+++ A ++ + A F +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ NV Y+ LI K ++A +L + GL P+ +++ +L++A K ++N A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L F M E P+ + Y ++I+G K F KA W+ + +++ + P+ +SY MI
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMIS 770
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GL++ G +E+ +++R K N D Y+++I GLS A ++++ R +
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 326 DVVTCNAMLNGLCKWGKVEES 346
TC +L+ L K +E++
Sbjct: 831 HNKTCVVLLDTLHKNDCLEQA 851
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 177/334 (52%), Gaps = 3/334 (0%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G P + + +SL+N F +S + A + G+ +V +LI LCK R
Sbjct: 7 LGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVP 66
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A +L+ M G+ P+ +Y +LI K G L A EM + + P+V+ ++ +ID
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+ K G K + +++ ++ + ++ PNV +Y+ +I GL R E++++ + M
Sbjct: 127 AYAKRGKLSKVDSVYKMMI-QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+V TYS+L +G + +D ++ DM R V+ + V+CN ++ G + GK++ + +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 350 WEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ M +G N+ SYNI + GLF NG+VE+A++ +E + +T +D TY I+IHG+C
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE-HMQKTRNDLDIITYTIMIHGMC 304
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
K + +A + + + + + D AY+ MI L
Sbjct: 305 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 162/303 (53%), Gaps = 9/303 (2%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ T + L+ C + A + M +G++ D LI+ K + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE---ETVFPNVVSYNV 262
LEV M +RG+ P+V+ Y+ +I G KSG A ER L E + + PNV++++
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA----ERRLHEMDSKKINPNVITFSA 123
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
+I ++ G+ S+ +++ M + +VFTYSSLI+GL +D A ++ MI +
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAM 381
+P+VVT + + NG K +V++ +L ++M Q G + N +S N IKG F+ GK++ A+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ + L + +Y I++ GL NG + KAL E + D+D+ Y+ MI+
Sbjct: 244 GVFGYM-TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 442 LCK 444
+CK
Sbjct: 303 MCK 305
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFA 140
V L+ K + AL + ++M DR G P V +++SL+ S + AE+
Sbjct: 50 VDTILIDTLCKNRLVVPALEVLKRMKDR--GISPNVVTYSSLITGLCKSGRLADAERRLH 107
Query: 141 YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
D+ ++PNV T++ LI K+ + K + + M + + P+ F+Y +LI
Sbjct: 108 EMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN 167
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
++ A+++ D M +G P+V+ Y+ + +GFFKS ++ + + + V N VS
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD-MPQRGVAANTVSC 226
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
N +I+G + G+ +L ++ M N ++ +Y+ ++ GL G ++ A ++ M
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYNIFIKGLFENGKVEE 379
R D++T M++G+CK V+E+++L+ ++ + + +Y I I L G E
Sbjct: 287 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Query: 380 A 380
A
Sbjct: 347 A 347
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 128/238 (53%), Gaps = 2/238 (0%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P++V+ + ++ G +++ + +M+K K DV + LI L + + A V
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFE 373
K M R +SP+VVT ++++ GLCK G++ ++ EM + + NVI+++ I +
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
GK+ + +++++++ + ++ + TY LI+GLC + +++A+++L+ +G +V
Sbjct: 131 RGKLSKVDSVYKMMI-QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLG 491
YS++ N K R+DD ++ M +RG NT CN LI G+ + + L G
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 142/271 (52%), Gaps = 3/271 (1%)
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
+M + G+EPD++ + +++GF S A + ++ + + +VV ++I L +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMGIKRDVVVDTILIDTLCKN 61
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
+LE+ +RMK +V TYSSLI GL + G L A+R +M ++++P+V+T
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
+A+++ K GK+ + +++ M Q S NV +Y+ I GL + +V+EA+ + +L++
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
+ + TY L +G K+ ++ +++L++ RG + + +++I + ++D
Sbjct: 182 K-GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 450 DAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
A GV M G N N ++ G N
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 2/195 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
DEA+ + M GC P V ++++L N F S + + K GV+ N + N
Sbjct: 170 DEAIKMLDLMISK-GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LIK + + + A G+ +M+ GL P+ SY ++ G++ AL F+ M +
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ D++ Y ++I G K+ +A +++ +L + + V P+ +Y +MI L+R G +E+
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKL-KFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Query: 277 LEIWERMKKNERKHD 291
+ +K+ R+++
Sbjct: 348 DALNRFYQKHVRQNE 362
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 227/466 (48%), Gaps = 18/466 (3%)
Query: 1 MVDLPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLL 60
M +L + L P ++ +L+S+ + AL+ F A R Y H V +L ++ T L
Sbjct: 165 MRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK--TKL 222
Query: 61 PHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
+ + + + + ++ +Y++ +AL + M R G P + N
Sbjct: 223 CQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA-GVEPNLLICN 281
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
+ ++ F + + E+A +F G+ PNV TYN +I+ C E+A LL M
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS-ERGVEPDVMCYNMIIDGFFKSGDFLK 239
G PDK SY T++ K + ++ +M+ E G+ PD + YN +I K +
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401
Query: 240 ANEMWERLLREETVFP-NVVSYNVMIRGLSRCGRFSESLE-IWERMKKNERKHDVFTYSS 297
A +W +E F + + Y+ ++ L + GR SE+ + I E + K DV TY++
Sbjct: 402 A--LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+++G ++G +D A+++ + M P+ V+ A+LNG+C+ GK S E E M S
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK---SLEAREMMNMSE 516
Query: 358 ----SRNVISYNIFIKGLFENGKVEEAMN-IWELLLGETALAVDSTTYGILIHGLCKNGY 412
S N I+Y++ + GL GK+ EA + + E++L +L+ LC++G
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL--KGFFPGPVEINLLLQSLCRDGR 574
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
++A + +EE ++G ++V ++++I+ C+ LD A V+ M
Sbjct: 575 THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 208/453 (45%), Gaps = 50/453 (11%)
Query: 65 HIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
++G + NC +++ Y +EA+ L M GC P S+ +++
Sbjct: 304 QVVGIVPNVVTYNC-------MIRGYCDLHRVEEAIELLEDMHSK-GCLPDKVSYYTIMG 355
Query: 125 AFAVSEQWERAEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
++ G+ P+ TYN LI +L K ++A L+ G R
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERG-VEPDVMCYNMIIDGFFKSGDFLKANE 242
DK Y +++A K G ++ A ++ +EM +G PDV+ Y +++GF + G+ KA +
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ + ++ PN VSY ++ G+ R G+ E+ E+ +++ + TYS ++HGL
Sbjct: 476 LLQ-VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNV 361
+ G L A V ++M+ + P V N +L LC+ G+ E+ + EE G + NV
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 362 ISYNIFIKGLFENGKVEEAMNIWE--LLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
+++ I G +N +++ A+++ + L+ + A D TY L+ L K G + +A ++
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHA---DVFTYTTLVDTLGKKGRIAEATEL 651
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV-SLMDKRGCKL------------- 465
+++ H+G D Y ++I+ C+ ++DD ++ ++ ++ C+
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLG 711
Query: 466 -------------------NTHVCNPLIDGFIK 479
+ C L++G++K
Sbjct: 712 KLEEADTLLGKVLRTASRSDAKTCYALMEGYLK 744
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 9/380 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ A K EA +L +M C P V ++ +++N F + ++A+K T
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G PN +Y L+ +C+ + +A+ ++ P+ +Y +++ + G L+ A
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+V EM +G P + N+++ + G +A + E L + NVV++ +I
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI-NVVNFTTVIH 602
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + +L + + M + DVFTY++L+ L + G + A + K M+ + + P
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
VT +++ C+ GKV++ + E+M I YN I+ L GK+EEA +
Sbjct: 663 TPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI-YNQVIEKLCVLGKLEEA----D 717
Query: 386 LLLGE---TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
LLG+ TA D+ T L+ G K G A +V +R DV + L
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 777
Query: 443 CKERRLDDAAGVVSLMDKRG 462
+ ++D+A ++ + +RG
Sbjct: 778 VLKGKVDEADKLMLRLVERG 797
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 173/360 (48%), Gaps = 18/360 (5%)
Query: 102 LFRKMDRVFGCRPG------------VRSFN-SLLNAFAVSEQWER-AEKFFAYFDTA-G 146
L R++ R+ G R +RS S + A S+ ER A KFF + D
Sbjct: 143 LVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWR 202
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
+ Y +++VL K + + ++ +L M G+ ++ ++ + ++ G L AL
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
+V M GVEP+++ N ID F ++ KA ER+ + + PNVV+YN MIRG
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM-QVVGIVPNVVTYNCMIRG 321
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSP 325
R E++E+ E M D +Y +++ L + + + + K M + P
Sbjct: 322 YCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVP 381
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D VT N +++ L K +E+ ++ + G R + + Y+ + L + G++ EA ++
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+L + D TY +++G C+ G ++KA ++L+ G + +Y++++N +C+
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCR 501
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 171/360 (47%), Gaps = 41/360 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + + + AL+ KM ++ G P + +F SL+N F ++ A
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKL-GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G PNV YN +I LC+K + A +L+ M +G+RPD +Y +LI G
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA----NEMWER-------------- 246
+ + +M G+ PDV+ ++ +ID + K G L+A NEM +R
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 247 ----------------LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+L + FPN V+YN +I G + R + ++I M ++
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D FTY++L G Q G A++V M+ V PD+ T N +L+GLC GK+ ++
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 351 EEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGL 407
E++ +S + +I+YNI IKGL + KVE+A W L L ++ D TY ++ GL
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDA---WYLFCSLALKGVSPDVITYITMMIGL 474
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 185/384 (48%), Gaps = 4/384 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
++AL LF M P + F+ LL A A ++E F + + G+S ++ ++
Sbjct: 61 NDALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LI C+ A L M +G P ++G+L+N A+ + D++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
EP+V+ YN IID + G A ++ + +++ + P+VV+YN +I L G + S
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKH-MKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
I M + DV T+S+LI + G L A++ Y +MI R V+P++VT N+++NG
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 337 LCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
LC G ++E+ ++ + G N ++YN I G + +V++ M I ++ +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL-CVMSRDGVDG 357
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D+ TY L G C+ G + A +VL G D++ ++ +++ LC ++ A +
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIK 479
+ K + N +I G K
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCK 441
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 35/236 (14%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K EA + +M + P + ++NSL+N + + A+K +
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G PN TYN LI CK + + +L MS G+ D F+Y TL + G +AA
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF----------- 254
+V M GV PD+ +N+++DG G KA E L + +TV
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 255 -----------------------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
P+V++Y M+ GL R + E+ E++ +M+K +
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y K D+ + + M R G ++N+L + + ++ AEK +
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV P++ T+N+L+ LC + KA L + +Y +I K +
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
A +F ++ +GV PDV+ Y ++ G + + +A+E++ ++ +E+ + P
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 169/317 (53%), Gaps = 7/317 (2%)
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+V T+ L+ LC + +A L+ M G +P YGT+IN K GD +
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL + +M E ++ V+ YN IID K G + A ++ + ++ +FP+V++Y+ MI
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMI 118
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R GR++++ ++ M + + DV T+S+LI+ L + G + A+ +Y DM+ R +
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYNIFIKGLFENGKVEEAMNI 383
P +T N+M++G CK ++ ++ + + M +S S +V++++ I G + +V+ M I
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + + ++ TY LIHG C+ G L+ A +L G + + SM+ +LC
Sbjct: 239 F-CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 444 KERRLDDAAGVVSLMDK 460
++ L A ++ + K
Sbjct: 298 SKKELRKAFAILEDLQK 314
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 161/319 (50%), Gaps = 7/319 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GCRP V +F +L+N + +A G P Y +I LCK + E A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
LL M ++ Y +I+ K G A +F EM ++G+ PDV+ Y+ +ID
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F +SG + A ++ ++ E + P+VV+++ +I L + G+ SE+ EI+ M +
Sbjct: 121 FCRSGRWTDAEQLLRDMI-ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
TY+S+I G + L+ A+R+ M + SPDVVT + ++NG CK +V+ E++
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
EM + G N ++Y I G + G ++ A ++ +++ + +A + T+ ++ LC
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS-SGVAPNYITFQSMLASLCS 298
Query: 410 NGYLNKALQVLEEAEHRGG 428
L KA +LE+ + G
Sbjct: 299 KKELRKAFAILEDLQKSEG 317
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ K + ALNL KM+ + V +N++++ A+ F
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD 104
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+V TY+ +I C+ + A+ LLR M + PD ++ LINA K G ++
Sbjct: 105 KGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE 164
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A E++ +M RG+ P + YN +IDGF K A M + + ++ P+VV+++ +I
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS-MASKSCSPDVVTFSTLI 223
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + R +EI+ M + + TY++LIHG Q+G+LD AQ + MI V+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
P+ +T +ML LC ++ ++F + E++ +S
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 148/291 (50%), Gaps = 7/291 (2%)
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
M G RPD ++ TL+N G + AL + D M E G +P Y II+G K GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
A + ++ E + +VV YN +I L + G + ++ M DV TYS
Sbjct: 57 TESALNLLSKM-EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
+I + G A+++ +DMI R+++PDVVT +A++N L K GKV E+ E++ +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 357 GS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
G I+YN I G + ++ +A + + + ++ + D T+ LI+G CK ++
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC-SPDVVTFSTLINGYCKAKRVDN 234
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
+++ E RG + Y+++I+ C+ LD A ++++M G N
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 142/273 (52%), Gaps = 7/273 (2%)
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
M E G PDV+ + +++G G L+A + +R++ EE P Y +I GL + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMV-EEGHQP----YGTIINGLCKMG 55
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+L + +M++ K V Y+++I L + G+ AQ ++ +M + + PDV+T +
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
M++ C+ G+ ++ +L +M + + +V++++ I L + GKV EA I+ +L
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML-R 174
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
+ + TY +I G CK LN A ++L+ + DV +S++IN CK +R+D+
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ M +RG NT LI GF + +L
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P V +F++L+NA + AE+ + G+ P TYN +I CK+ AK +
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M+ PD ++ TLIN K ++ +E+F EM RG+ + + Y +I GF +
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
GD A ++ ++ V PN +++ M+ L ++ I E ++K+E H
Sbjct: 264 VGDLDAAQDLLNVMI-SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHH 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
M+ PDVVT ++NGLC G+V ++ L + M + G + Y I GL + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ---PYGTIINGLCKMGDT 57
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
E A+N+ + ET + Y +I LCK+G+ A + E +G DV YS
Sbjct: 58 ESALNLLSKM-EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
MI++ C+ R DA ++ M +R + + LI+ +K ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ A K EA ++ M R G P ++NS+++ F ++ A++ +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLR-RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
SP+V T++ LI CK + + + M G+ + +Y TLI+ + GDL+AA
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ + M GV P+ + + ++ + KA + E L + E
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 196/427 (45%), Gaps = 39/427 (9%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+ L A KR D L +FR+M G + V S ++ + E+++K F
Sbjct: 193 IVFLVAAKKRRRIDLCLEIFRRMVDS-GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFS 251
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ P TYN +I K+R+F +G+L+ M G+ +K +Y L+ + K G ++
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A ++FDEM ERG+E DV Y +I + G+ +A +++ L E+ + P+ +Y +
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT-EKGLSPSSYTYGAL 370
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I G+ + G + + M+ +++LI G + G +D A +Y M +
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 324 SPDVVTCNA-----------------------------------MLNGLCKWGKVEESFE 348
DV TCN +++ CK G VEE+
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
L+ EM G + N I+YN+ I + GK++EA + + + DS TY LIHG
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL-RANMEANGMDPDSYTYTSLIHGE 549
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
C +++A+++ E +G D + Y+ MI+ L K + D+A G+ M ++G ++
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 468 HVCNPLI 474
V LI
Sbjct: 610 KVYTALI 616
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 189/392 (48%), Gaps = 4/392 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+ + Y M +E L +F M + G RS L A + + + F +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKK-GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV V + ++++ LC++ E EK+K L++ S G++P+ ++Y T+INA K+ D +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
V M + GV + + Y ++++ K+G A ++++ + RE + +V Y +I
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM-RERGIESDVHVYTSLIS 337
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
R G + +++ + + +TY +LI G+ ++G + A+ + +M + V+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
V N +++G C+ G V+E+ +++ M Q G + +V + N I F K + W
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT-IASCFNRLKRYDEAKQW 456
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ E + + + +Y LI CK G + +A ++ E +G + Y+ MI A CK
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+ ++ +A + + M+ G +++ LI G
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 155/326 (47%), Gaps = 42/326 (12%)
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
+++ +V FE+ + +M GL D+ S + AA KR ++ LE+F M +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF---PNVVSYNVMIRGLSRCG 271
GV+ V ++++G + G+ K+ ++L++E +V P +YN +I +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKS----KKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
FS + + MKK+ ++ TY+ L+ + G + A++++ +M R + DV
Sbjct: 274 DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
++++ C+ G ++ +F L++E+ + G
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKG---------------------------------- 359
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
L+ S TYG LI G+CK G + A ++ E + +G ++ ++++I+ C++ +D+A
Sbjct: 360 -LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ + +M+++G + + CN + F
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCF 444
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
++ N ++ V TL+ Y ++ M DEA ++ M++ G + V + N++ + F +++
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK-GFQADVFTCNTIASCFNRLKRY 450
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+ A+++ GV + +Y LI V CK+ E+AK L MS G++P+ +Y +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I A K+G + A ++ M G++PD Y +I G + + +A ++ + +
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE-MGLKG 569
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ N V+Y VMI GLS+ G+ E+ +++ MK+ D Y++LI +
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 341 GKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT 399
G EE +++ M + G S + S +F+ + +++ + I+ ++ ++ + + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV-DSGVKITVYS 226
Query: 400 YGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMD 459
I++ GLC+ G + K+ ++++E +G + + Y+++INA K+R GV+ +M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 460 KRGCKLNTHVCNPLIDGFIKNSNLT 484
K G N L++ +KN ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMS 311
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 197/410 (48%), Gaps = 14/410 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRK-----MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
T+++ K P+ AL +F + F C N + F + + A F
Sbjct: 420 TMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-------NKIFLLFCKQGKVDAATSFL 472
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ G+ PNV YN ++ C+ + + A+ + M GL P+ F+Y LI+ K
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
D A +V ++M+ E + + YN II+G K G KA EM + L++E+ + S
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
YN +I G + G ++E + M +N + +V T++SLI+G + +D A + +M
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ D+ A+++G CK ++ ++ L+ E+ + G NV YN I G GK++
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
A+++++ ++ + ++ D TY +I GL K+G +N A + E G D + +
Sbjct: 713 AAIDLYKKMVND-GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+N L K+ + A+ ++ M K+ N + + +I G + NL F+
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 196/392 (50%), Gaps = 5/392 (1%)
Query: 90 YAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSP 149
+ K+ D A + + M++ G P V +N+++ A + + A F+ G+ P
Sbjct: 459 FCKQGKVDAATSFLKMMEQK-GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
N TY++LI K ++ + A ++ M+ ++ Y T+IN K G + A E+
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 210 DEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
+ E+ YN IIDGF K GD A E + R + E PNVV++ +I G
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY-REMSENGKSPNVVTFTSLINGFC 636
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ R +LE+ MK E K D+ Y +LI G + ++ A ++ ++ + P+V
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
N++++G GK++ + +L+++M G S ++ +Y I GL ++G + A +++ L
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
L + + D + +L++GL K G KA ++LEE + + +V YS++I +E
Sbjct: 757 L-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN 815
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
L++A + M ++G + V N L+ G ++
Sbjct: 816 LNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 204/440 (46%), Gaps = 50/440 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRK-MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFA---- 140
L++A + P+EA+ +FR+ M R G P + LL + AV + + A
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSR--GAEP-----DGLLFSLAVQAACKTPDLVMALDLL 297
Query: 141 --YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
GV + ETY +I K+ E+A ++ M G G+ + +L+N K
Sbjct: 298 REMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCK 357
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
+L AL++F+ M E G+ PD + ++++++ F K+ + KA E + R ++ + P+ V
Sbjct: 358 GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR-MKSVRIAPSSV 416
Query: 259 SYNVMIRGLSRCGR-------FSESLEIW---------------------------ERMK 284
+ MI+G + F++S E W + M+
Sbjct: 417 LVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMME 476
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
+ + +V Y++++ +M N+D A+ ++ +M+ + + P+ T + +++G K +
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 345 ESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
++++ +M S N + YN I GL + G+ +A + + L+ E ++ T+Y +
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
I G K G + A++ E G +V ++S+IN CK R+D A + M
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 464 KLNTHVCNPLIDGFIKNSNL 483
KL+ LIDGF K +++
Sbjct: 657 KLDLPAYGALIDGFCKKNDM 676
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 157/357 (43%), Gaps = 38/357 (10%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
A N +E + T++ K +A + + + + S+NS+++ F
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+ A + + G SPNV T+ LI CK + A + M + L+ D +YG L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I+ K+ D+ A +F E+ E G+ P+V YN +I GF G A +++++++ +
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-- 724
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
G+S C F TY+++I GL + GN++ A
Sbjct: 725 -------------GIS-CDLF--------------------TYTTMIDGLLKDGNINLAS 750
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
+Y +++ + PD + ++NGL K G+ ++ ++ EEM + + NV+ Y+ I G
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G + EA + + +L E + D T + +L+ G + + L E R
Sbjct: 811 HREGNLNEAFRLHDEML-EKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEMRSS 866
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 179/389 (46%), Gaps = 3/389 (0%)
Query: 95 MPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
+P+ +N + FG R+FN LLNA+ +++ + A F V P V
Sbjct: 148 IPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYV 207
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N ++ L + ++AK + M +G+ D + L+ A+ + A+++F +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
RG EPD + +++ + K+ D + A ++ + + V + +Y +I + G
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
E++ + + M V +SL++G + L A ++ M ++PD V + M+
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 335 NGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
CK ++E++ E + M + + + + I+G + E A+ I+ E+ +
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF-ESWI 446
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
A I + CK G ++ A L+ E +G + +V Y++M+ A C+ + +D A
Sbjct: 447 AHGFMCNKIFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+ S M ++G + N + LIDGF KN +
Sbjct: 506 IFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 225/450 (50%), Gaps = 11/450 (2%)
Query: 39 YTHSSAVLQHVLRRVA--SDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMP 96
YT + +++ ++ R+ S+P+ + H + A+E Q+ S V L+ + + +
Sbjct: 91 YTLARCLIKSLIERLKRHSEPSNMSH--RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLF 148
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+EAL + R+M C P ++ S+LN +++ + + G+ P+V Y V
Sbjct: 149 EEALWVSREMK----CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFV 204
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L + K+ + K + LL M+ +G++P+ + Y I + + A ++F+ M + G
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
V P++ Y+ +IDG+ K+G+ +A +++ +L E + PNVV + ++ G + +
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE-LLPNVVVFGTLVDGFCKARELVTA 323
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
++ M K +++ Y+ LIHG + GN+ A + +M +SPDV T ++NG
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 337 LCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
LC +V E+ L+++M + + +YN I G + +E+A+++ + + +
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA-SGVEP 442
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+ T+ LI G C + A+ + E +G DV Y+++I+A KE + +A +
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
S M + G N H L+DGF K L++
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 185/367 (50%), Gaps = 4/367 (1%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+EA +F M + G P + +++++++ + + +A + A + PNV +
Sbjct: 251 EEAEKMFELMKK-HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L+ CK RE A+ L M G+ P+ + Y LI+ K G++ A+ + EM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ PDV Y ++I+G +AN +++++ + E +FP+ +YN +I G + ++
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
L++ M + + ++ T+S+LI G + ++ A +Y +M + + PDVVT A+++
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Query: 337 LCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
K ++E+ L+ +M ++G N ++ + G ++ G++ A++ ++ +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN-NQQRSCW 547
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+ + LI GLC+NGY+ +A + + G D+ +Y SM+ +E+R+ D +
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607
Query: 456 SLMDKRG 462
M K G
Sbjct: 608 CDMIKTG 614
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 184/378 (48%), Gaps = 7/378 (1%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G +P V + + + E AEK F GV PN+ TY+ +I CK +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A GL + + L P+ +GTL++ K +L A +F M + GV+P++ YN +I
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
G KSG+ L+A + + + P+V +Y ++I GL + +E+ ++++MK
Sbjct: 348 GHCKSGNMLEAVGLLSE-MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
TY+SLIHG + N++ A + +M V P+++T + +++G C ++ + L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 350 WEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ EM G +V++Y I F+ ++EA+ ++ +L E + + T+ L+ G
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML-EAGIHPNDHTFACLVDGFW 525
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
K G L+ A+ +E + + ++ +I LC+ + A+ S D R C +
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS--DMRSCGITPD 583
Query: 469 VCN--PLIDGFIKNSNLT 484
+C+ ++ G ++ +T
Sbjct: 584 ICSYVSMLKGHLQEKRIT 601
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 147/296 (49%), Gaps = 3/296 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + K EA+ L +M+ + P V ++ L+N + +Q A + F
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESL-NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ P+ TYN LI CK+ E+A L M+ G+ P+ ++ TLI+ D+ AA
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ ++ EM+ +G+ PDV+ Y +ID FK + +A ++ +L E + PN ++ ++
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML-EAGIHPNDHTFACLVD 522
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + GR S +++ ++ + + ++ LI GL Q G + A R + DM ++P
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFE-NGKVEEA 380
D+ + +ML G + ++ ++ L +M ++G + N + ++ NG V+ A
Sbjct: 583 DICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 201/410 (49%), Gaps = 14/410 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRK-----MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
T+++ + K +EAL LF + + VF C N++L+ + + A +
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVC-------NTILSWLCKQGKTDEATELL 466
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ ++ G+ PNV +YN ++ C+++ + A+ + + GL+P+ ++Y LI+ +
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
D ALEV + M+ +E + + Y II+G K G KA E+ ++ E+ + + +S
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
YN +I G + G ++ +E M N +V TY+SL++GL + +D A + +M
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVE 378
+ V D+ A+++G CK +E + L+ E+ + G + + YN I G G +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
A+++++ +L + L D TY LI GL K+G L A ++ E + G D Y+ +
Sbjct: 707 AALDLYKKMLKD-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+N L K+ + + M K N + N +I G + NL F+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 194/398 (48%), Gaps = 5/398 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L K+ DEA L KM+ G P V S+N+++ + + A F+
Sbjct: 448 TILSWLCKQGKTDEATELLSKMES-RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PN TY++LI + + + A ++ M+ + + Y T+IN K G +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 205 ALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A E+ M E+ + M YN IIDGFFK G+ A +E + + PNV++Y +
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSL 625
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ GL + R ++LE+ + MK K D+ Y +LI G + N++ A ++ +++ +
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMN 382
+P N++++G G + + +L+++M + G R ++ +Y I GL ++G + A
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
++ + L D Y ++++GL K G K +++ EE + +V Y+++I
Sbjct: 746 LYTEMQA-VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+E LD+A + M +G + + L+ G + N
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 207/466 (44%), Gaps = 19/466 (4%)
Query: 16 LLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQN 75
LL NP +AL+ + A G V ++ + S P A ++ + N
Sbjct: 79 LLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVSTSN 138
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
V ++ L AK FG R+FN LLNA++ Q + A
Sbjct: 139 PTPMASVLVSKLVDSAKS----------------FGFEVNSRAFNYLLNAYSKDRQTDHA 182
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
V P N + L ++ +AK L M +G+ D + L+ A
Sbjct: 183 VDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRA 242
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+ + ALEV ERG EPD + Y++ + K+ D AN + + ++ P
Sbjct: 243 SLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVP 302
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+ +Y +I + G +++ + + M + +V +SLI G + +L A ++
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
M SP+ VT + ++ K G++E++ E +++M G + +V + I+G +
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
K EEA+ +++ ET LA + ++ LCK G ++A ++L + E RG +V +
Sbjct: 423 QKHEEALKLFDESF-ETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
Y++++ C+++ +D A V S + ++G K N + + LIDG +N
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 81 DVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
D+P L+ + KRS + A LF ++ G P +NSL++ F A
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
+ G+ ++ TY LI L K A L M VGL PD+ Y ++N +K
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
+G +++F+EM + V P+V+ YN +I G ++ G+ +A + + +L ++ + P+
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML-DKGILPDGA 830
Query: 259 SYNVMIRG 266
++++++ G
Sbjct: 831 TFDILVSG 838
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 190/391 (48%), Gaps = 43/391 (10%)
Query: 120 NSLLNAFAVSEQWERAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+++++ F + E A FF + D+ + PN+ TY L+ LC+ + ++ + L+R +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
G D Y I+ K G L AL EM E+G+ DV+ Y+++IDG K G+
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+A + ++++ E V PN+++Y +IRGL + G+ E+ ++ R+ + D F Y +L
Sbjct: 295 EALGLLGKMIK-EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTL 353
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I G+ + GNL+ A + DM R + P ++T N ++NGLC G+V E+ +E+ +
Sbjct: 354 IDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSKGVV 409
Query: 359 RNVISY-----------------------------------NIFIKGLFENGKVEEAMNI 383
+VI+Y NI +K G EA +
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + E L D+ TY +I G CK G + +AL++ E V Y+ +I+ALC
Sbjct: 470 YR-AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALC 527
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
K+ LD A V+ + ++G L+ H L+
Sbjct: 528 KKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 9/367 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G V S++ L++ + E A GV PN+ TY +I+ LCK + E+A
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L + VG+ D+F Y TLI+ ++G+LN A + +M +RG++P ++ YN +I+G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+G +A+E+ + V +V++Y+ ++ + LEI R + +
Sbjct: 392 LCMAGRVSEADEV------SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D+ + L+ MG A +Y+ M ++PD T M+ G CK G++EE+ E++
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
E+ +S + YN I L + G ++ A + + L E L +D T L+H + N
Sbjct: 506 NELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL-IELWEKGLYLDIHTSRTLLHSIHAN 564
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN--TH 468
G L ++ E DV + + I LCK + A V +M ++G + +
Sbjct: 565 GGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPST 624
Query: 469 VCNPLID 475
+ L+D
Sbjct: 625 ILKTLVD 631
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 198/432 (45%), Gaps = 50/432 (11%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+++ K +EA LF ++ V G + +L++ RA +
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ TYN +I LC +A + + + G D +Y TL+++ K +++A
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAV 431
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LE+ E + D++ N+++ F G + +A+ ++ R + E + P+ +Y MI+
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY-RAMPEMDLTPDTATYATMIK 490
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + G+ E+LE++ ++K+ V Y+ +I L + G LD A V ++ + +
Sbjct: 491 GYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Query: 326 DVVT-------------------------------CNAMLNG----LCKWGKVEESFELW 350
D+ T C MLN LCK G E + E++
Sbjct: 550 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY 609
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL--GETALA-VDSTTYGILIHGL 407
M + G V + +K L +N + +++ + L++ GET L+ +D Y I+I+GL
Sbjct: 610 MIMRRKG-LTVTFPSTILKTLVDNLR---SLDAYLLVVNAGETTLSSMDVIDYTIIINGL 665
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
CK G+L KAL + A+ RG ++ Y+S+IN LC++ L +A + ++ G +
Sbjct: 666 CKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE 725
Query: 468 HVCNPLIDGFIK 479
LID K
Sbjct: 726 VTYGILIDNLCK 737
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 168/400 (42%), Gaps = 82/400 (20%)
Query: 125 AFAVSEQWERAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL---RWMSGV 180
AF ++E AEKF + A + P + LI R+ + +KGLL +
Sbjct: 70 AFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRD-DPSKGLLILRDCLRNH 128
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP--DVMCYNMIIDGFFKSGDFL 238
G P ++ +LI ++G+++ A+EV + M+ + V D + +I GF K G
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER---------------- 282
A +E + + PN+V+Y ++ L + G+ E ++ R
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 283 -------------------MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
M + DV +YS LI GLS+ GN++ A + MI V
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNI 383
P+++T A++ GLCK GK+EE+F L+ + G
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG-------------------------- 342
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ VD Y LI G+C+ G LN+A +L + E RG + Y+++IN LC
Sbjct: 343 ---------IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
R+ +A V +G + + L+D +IK N+
Sbjct: 394 MAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNI 428
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 177/410 (43%), Gaps = 42/410 (10%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G V ++++LL+++ + + + F A + ++ N+L+K + +A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L R M + L PD +Y T+I K G + ALE+F+E+ + V V CYN IID
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDA 525
Query: 231 FFKSGDFLKANE----MWERLLREETVFPNVVSYNVMIRG-------------------- 266
K G A E +WE+ L + + +++ G
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 267 ----------LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG--LSQMGNLDGAQRV 314
L + G F ++E++ M+ RK T+ S I + + +LD V
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMR---RKGLTVTFPSTILKTLVDNLRSLDAYLLV 642
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
S DV+ ++NGLCK G + ++ L G + N I+YN I GL +
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
G + EA+ +++ L L TYGILI LCK G A ++L+ +G ++
Sbjct: 703 QGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
Y+S+++ CK + +DA VVS + + +I G+ K ++
Sbjct: 762 IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 185/451 (41%), Gaps = 88/451 (19%)
Query: 85 TLLKAYAKRSMPDEALNLFRK-------MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
TLL +Y K D L + R+ MD V C N LL AF + + A+
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM-C-------NILLKAFLLMGAYGEADA 468
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA 197
+ ++P+ TY +IK CK + E+A + + + Y +I+A
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALC 527
Query: 198 KRGDLNAALEVFDEMSERGVEPDV--------------------------------MCYN 225
K+G L+ A EV E+ E+G+ D+ +C
Sbjct: 528 KKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 226 MIIDGFF---KSGDFLKANEMWERLLRE--ETVFP------------------------- 255
M+ D K G F A E++ + R+ FP
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 256 ------NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+V+ Y ++I GL + G ++L + K + TY+SLI+GL Q G L
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFI 368
A R++ + + P VT +++ LCK G ++ +L + M G N+I YN +
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 369 KGLFENGKVEEAMNIWEL-LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
G + G+ E+AM + ++G + D+ T +I G CK G + +AL V E + +
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGR--VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
D F + +I C + R+++A G++ M
Sbjct: 826 ISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 25/323 (7%)
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
+T S +V Y ++I LCK+ KA L + G+ + +Y +LIN ++G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
AL +FD + G+ P + Y ++ID K G FL A ++ + ++ + V PN++ YN
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV-PNIIIYNS 765
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ G + G+ +++ + R D FT SS+I G + G+++ A V+ + +
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI------------SYNIFIKG 370
+S D ++ G C G++EE+ L EM S S + S F+
Sbjct: 826 ISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE 885
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTY--GILIHGLCKNGYLNKALQVLEEAEHRGG 428
L E G+V +A+ I + + ST Y G + + +LN + EE + +
Sbjct: 886 LCEQGRVPQAIKILD--------EISSTIYPSGKNLGSYQRLQFLNDVNE--EEIKKKDY 935
Query: 429 DVDVFAYSSMINALCKERRLDDA 451
D + S +++LC +L+ A
Sbjct: 936 VHDFHSLHSTVSSLCTSGKLEQA 958
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 21/267 (7%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
V + ++N +A ++ + GV+ N TYN LI LC++ +A L
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ +GL P + +YG LI+ K G A ++ D M +G+ P+++ YN I+DG+ K G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
A + R + V P+ + + MI+G + G E+L ++ K D F +
Sbjct: 775 QTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV--------------TCNAMLNGLCKWG 341
LI G G ++ A+ + ++M+ VS VV + L LC+ G
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREML---VSESVVKLINRVDAELAESESIRGFLVELCEQG 890
Query: 342 KVEESFELWEEMGQS---GSRNVISYN 365
+V ++ ++ +E+ + +N+ SY
Sbjct: 891 RVPQAIKILDEISSTIYPSGKNLGSYQ 917
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 212 MSERGVEPDVMCYNMIIDGF-FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
+S+ + P + +I GF D K + LR FP+ +++ +I
Sbjct: 88 ISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEK 147
Query: 271 GRFSESLEIWERMKKNERKH--DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV-SPDV 327
G ++E+ E M + D F S++I G ++G + A ++ + V P++
Sbjct: 148 GEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNL 207
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWEL 386
VT +++ LC+ GKV+E +L + G + + Y+ +I G F+ G + +A+ + +
Sbjct: 208 VTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL-MQDR 266
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
+ E + D +Y ILI GL K G + +AL +L + G + ++ Y+++I LCK
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 447 RLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLG 491
+L++A + + + G +++ + LIDG + NL F LG
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ ++ EAL LF ++ + G P ++ L++ + AEK +
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENI-GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLL-RWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ PN+ YN ++ CK + E A ++ R M G + PD F+ ++I K+GD+
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMG-RVTPDAFTVSSMIKGYCKKGDME 812
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV------ 257
AL VF E ++ + D + +I GF G +A + +L E+V +
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAE 872
Query: 258 VSYNVMIRG----LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
++ + IRG L GR ++++I + + SS I+ + NL QR
Sbjct: 873 LAESESIRGFLVELCEQGRVPQAIKILDEI------------SSTIYPSGK--NLGSYQR 918
Query: 314 VY-------KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+ +++ + D + ++ ++ LC GK+E++ E
Sbjct: 919 LQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEF 961
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 123/321 (38%), Gaps = 48/321 (14%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G P S + + N L+ + ++ + + + Y+++ F + A
Sbjct: 21 GFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDA 80
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRC-GRFSESLEIWERMKKNERKHDVF----TY 295
+ + + ++FP + +I G S S+ L I ++ R H F T+
Sbjct: 81 EKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLI---LRDCLRNHGAFPSSLTF 137
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSP--DVVTCNAMLNGLCKWGKVEESFELWEEM 353
SLI+ + G +D A V + M + V+ D C+A+++G CK GK E + +E
Sbjct: 138 CSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESA 197
Query: 354 GQSGSR--NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNG 411
SG N+++Y + L + GKV+E ++ L E D Y IHG K G
Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE-GFEFDCVFYSNWIHGYFKGG 256
Query: 412 YLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCN 471
L AL E +G + DV +YS
Sbjct: 257 ALVDALMQDREMVEKGMNRDVVSYS----------------------------------- 281
Query: 472 PLIDGFIKNSNLTLLFKSLGK 492
LIDG K N+ LGK
Sbjct: 282 ILIDGLSKEGNVEEALGLLGK 302
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 200/431 (46%), Gaps = 39/431 (9%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ AYA+ M DEA+ L +M G +P V ++ +LL+ F + + E A F
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEK-GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
AG PN+ T+N IK+ + +F + + ++ GL PD ++ TL+ + G +
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
VF EM G P+ +N +I + + G F +A ++ R+L + V P++ +YN ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVL 531
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL---------------------- 302
L+R G + +S ++ M+ K + TY SL+H
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 303 -------------SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
S+ L A+R + ++ R SPD+ T N+M++ + V ++ +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 350 WEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ M + G + ++ +YN + + ++ I +L + + D +Y +I+ C
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIYAYC 710
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+N + A ++ E + G DV Y++ I + + ++A GVV M K GC+ N +
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 469 VCNPLIDGFIK 479
N ++DG+ K
Sbjct: 771 TYNSIVDGYCK 781
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 6/374 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK-REFEKAKGLL 174
V S+ SL++AFA S ++ A F + G P + TYNV++ V K + K L+
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNA-ALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M G+ PD ++Y TLI KRG L+ A +VF+EM G D + YN ++D + K
Sbjct: 268 EKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
S +A ++ ++ P++V+YN +I +R G E++E+ +M + K DVF
Sbjct: 327 SHRPKEAMKVLNEMVL-NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY++L+ G + G ++ A ++++M P++ T NA + GK E ++++E+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
G S +++++N + +NG E +++ + + T+ LI + G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK-EMKRAGFVPERETFNTLISAYSRCGS 504
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
+A+ V G D+ Y++++ AL + + + V++ M+ CK N
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 473 LIDGFIKNSNLTLL 486
L+ + + L+
Sbjct: 565 LLHAYANGKEIGLM 578
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 176/366 (48%), Gaps = 5/366 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA-VSEQWERAEKFFAYFD 143
+L+ A+A EA+N+F+KM+ GC+P + ++N +LN F + W +
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEED-GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ G++P+ TYN LI + ++A + M G DK +Y L++ K
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A++V +EM G P ++ YN +I + + G +A E+ ++ E+ P+V +Y +
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTL 390
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ G R G+ ++ I+E M+ K ++ T+++ I G +++ ++ +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
SPD+VT N +L + G E +++EM ++G ++N I G E+AM
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
++ +L + + D +TY ++ L + G ++ +VL E E + Y S+++A
Sbjct: 511 VYRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 443 CKERRL 448
+ +
Sbjct: 570 ANGKEI 575
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 155/324 (47%), Gaps = 4/324 (1%)
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
++I +L K+ A + + G D +SY +LI+A A G A+ VF +M E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 216 GVEPDVMCYNMIIDGFFKSGD-FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G +P ++ YN+I++ F K G + K + E+ ++ + + P+ +YN +I R
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEK-MKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
E+ +++E MK +D TY++L+ + A +V +M+ SP +VT N+++
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 335 NGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+ + G ++E+ EL +M + G++ +V +Y + G GKVE AM+I+E +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGC 415
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
+ T+ I G + +++ +E G D+ +++++ + + +G
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGF 477
V M + G N LI +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAY 499
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 37/304 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ AY++ ++A+ ++R+M G P + ++N++L A A WE++EK A +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 145 AGVSPNVETY-------------------------------NVLIKVL---CKKREF-EK 169
PN TY VL+K L C K + +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A+ + G PD + ++++ +R + A V D M ERG P + YN ++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+S DF K+ E+ +L + + P+++SYN +I R R ++ I+ M+ +
Sbjct: 673 MHSRSADFGKSEEILREIL-AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
DV TY++ I + + A V + MI P+ T N++++G CK + +E+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 350 WEEM 353
E++
Sbjct: 792 VEDL 795
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 136/267 (50%), Gaps = 8/267 (2%)
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
+II K G A M+ L +E+ +V SY +I + GR+ E++ ++++M++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGL-QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 286 NERKHDVFTYSSLIHGLSQMGN-LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV- 343
+ K + TY+ +++ +MG + + + M ++PD T N ++ CK G +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 344 EESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW-ELLLGETALAVDSTTYG 401
+E+ +++EEM +G S + ++YN + ++ + +EAM + E++L + ++ TY
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI--VTYN 353
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
LI ++G L++A+++ + +G DVF Y+++++ + +++ A + M
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 462 GCKLNTHVCNPLIDGFIKNSNLTLLFK 488
GCK N N I + T + K
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMK 440
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
AE+ F+ G SP++ T N ++ + +++ KA G+L +M G P +Y +L+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
++ D + E+ E+ +G++PD++ YN +I + ++ A+ ++ + R +
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIV 731
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+V++YN I + F E++ + M K+ + + TY+S++ G ++ D A+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 315 YKDMIGRRVSP 325
+D+ R + P
Sbjct: 792 VEDL--RNLDP 800
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 343 VEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA--VDSTTY 400
+ E FE +++ +S S +++ F+KGL + K + A+ ++ + + +D++
Sbjct: 120 LSELFEPFKDKPESTSSELLA---FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVV 176
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
I+I L K G ++ A + + G +DV++Y+S+I+A R +A V M++
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 461 RGCKLNTHVCNPLIDGFIK 479
GCK N +++ F K
Sbjct: 237 DGCKPTLITYNVILNVFGK 255
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 188/393 (47%), Gaps = 19/393 (4%)
Query: 102 LFRKMDRVFGC-RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKV 160
LF R GC + R FNSL+ ++ + ++ + K F G+SP+V T+N L+ +
Sbjct: 123 LFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSI 182
Query: 161 LCKKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP 219
L K+ A L M G+ PD +++ TLIN K ++ A +F +M P
Sbjct: 183 LLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNP 242
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREET-VFPNVVSYNVMIRGLSRCGRFSESLE 278
DV+ YN IIDG ++G A+ + +L++ T V PNVVSY ++RG E++
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG-----RRVSPDVVTCNAM 333
++ M K + TY++LI GLS+ D + + +IG +PD T N +
Sbjct: 303 VFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI---LIGGNDAFTTFAPDACTFNIL 359
Query: 334 LNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIW------EL 386
+ C G ++ + ++++EM + SY++ I+ L + + A ++ E+
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
LLG+ + Y + LC NG +A +V + RG D +Y ++I C+E
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREG 478
Query: 447 RLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ A ++ LM +R + LIDG +K
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 187/403 (46%), Gaps = 17/403 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL KR A +LF +M R +G P +FN+L+N F + + A + F +
Sbjct: 178 SLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL 237
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM--SGVGLRPDKFSYGTLINAAAKRGDL 202
+P+V TYN +I LC+ + + A +L M + P+ SY TL+ + ++
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF----PNVV 258
+ A+ VF +M RG++P+ + YN +I G ++ + +E+ + L+ F P+
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY---DEIKDILIGGNDAFTTFAPDAC 354
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
++N++I+ G ++++++ M + D +YS LI L D A+ ++ ++
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 319 IGRRV-------SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGL 371
+ V P N M LC GK +++ +++ ++ + G ++ SY I G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGH 474
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
GK + A + L+L D TY +LI GL K G A L+
Sbjct: 475 CREGKFKPAYELLVLML-RREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
+ S++ L K + +++ +V+LM ++ + N + ++
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 17/377 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL++ Y + DEA+ +F M G +P ++N+L+ + + +++ + +
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 145 A--GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
A +P+ T+N+LIK C + A + + M + L PD SY LI R +
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 203 NAALEVFDEMSERGV-------EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+ A +F+E+ E+ V +P YN + + +G +A +++ +L++ P
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP 464
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
SY +I G R G+F + E+ M + E D+ TY LI GL ++G A
Sbjct: 465 P--SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI-FIKGLFEN 374
+ M+ P T +++L L K ESF L M + R I + ++ LF +
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSS 582
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
+ E+A I LL L G L C+N L A ++ + VD+
Sbjct: 583 AQKEKAFLIVRLLYDNGYLVKMEELLGYL----CENRKLLDAHTLVLFCLEKSQMVDIDT 638
Query: 435 YSSMINALCKERRLDDA 451
+++I LCK +R +A
Sbjct: 639 CNTVIEGLCKHKRHSEA 655
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 43/334 (12%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+KA+ D A+ +F++M + P S++ L+ + +++RAE F
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNM-KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 146 GV-------SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
V P YN + + LC + ++A+ + R + G++ D SY TLI +
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR 476
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
G A E+ M R PD+ Y ++IDG K G+ L A++ +R+LR + P
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS-SYLPVAT 535
Query: 259 SYNVMIRGLSRCGRFSES-----LEIWERMKKN--------------ERKHDVFTYSSLI 299
+++ ++ L++ +ES L + +R+++N +K F L+
Sbjct: 536 TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLL 595
Query: 300 HG---LSQMGNLDG----------AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
+ L +M L G A + + + D+ TCN ++ GLCK + E+
Sbjct: 596 YDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEA 655
Query: 347 FELWEEMGQSGSRNVISYNIFIKGLFE-NGKVEE 379
F L+ E+ + G+ +S ++ ++ E GK EE
Sbjct: 656 FSLYNELVELGNHQQLSCHVVLRNALEAAGKWEE 689
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 42/412 (10%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D AL L +KM G PG+ + N LLN + E+A+ G SPN +YN
Sbjct: 138 DAALWLRKKM-IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL----NAALEVFDEM 212
LIK LC +KA L M+ G+RP++ + +++A ++G + LE +
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
S+ D++ +++D FK+G+ ++A E+W+ + ++ V + V YNV+IRGL G
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKE-MSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNA 332
+ M K DVFTY++LI L + G D A ++ M V+PD ++
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 333 MLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLG-- 389
++ GLC G V + E M +S V+ +N+ I G G A+++ L+L
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 390 --------------------------------ETALAVDSTTYGILIHGLCKNGYLNKAL 417
T + D+TTY +L+ C G+L A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAF 495
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
Q+ +E RG D+ Y+ ++ LC + RL A ++S + G ++ HV
Sbjct: 496 QLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID-HV 546
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 177/384 (46%), Gaps = 43/384 (11%)
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
W R + ++ GV P + T+N L+ LCK EKA GL+R M +G P+ SY T
Sbjct: 142 WLRKKMIYS-----GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE--MWERLLR 249
LI +++ AL +F+ M++ G+ P+ + N+I+ + G N+ + E L
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 250 EETVFP-NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ P ++V +++ + G ++LE+W+ M + D Y+ +I GL GN+
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
A DM+ R V+PDV T N +++ LCK GK +E+ +L M G + + ISY +
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 368 IKGLFENGKVEEA---------------MNIWELLL------GETALAVDS----TTYGI 402
I+GL +G V A + +W +++ G+T+ A+ +YG+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 403 ---------LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
LIHG K G L A V E D Y+ ++ A C L A
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGF 477
+ M +RGC+ + L+ G
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGL 520
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 5/355 (1%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P +S + L+ L S N AL LF ++ G + ++ + + +
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY-GIRPNRVTCNIIVHALCQKGVIGNNNK 247
Query: 65 HIIGAIEAAQNCNCSEDVPLT--LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
++ I + N D+ + L+ + K +AL ++++M + V +N +
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV-VYNVI 306
Query: 123 LNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
+ S A F GV+P+V TYN LI LCK+ +F++A L M G+
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
PD+ SY +I GD+N A E M + + P+V+ +N++IDG+ + GD A
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ L+ V PNV + N +I G + GR ++ + M+ + D TY+ L+
Sbjct: 427 VLN-LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+G+L A ++Y +M+ R PD++T ++ GLC G+++++ L + +G
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 164/353 (46%), Gaps = 15/353 (4%)
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
K F Y D + ++ +++ LC + + + A L + M G+ P ++ L+N
Sbjct: 113 KSFDYDDCLSI------HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGL 166
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
K G + A + EM E G P+ + YN +I G + KA ++ + + + PN
Sbjct: 167 CKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNT-MNKYGIRPN 225
Query: 257 VVSYNVMIRGLSRCGRFSES-----LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
V+ N+++ L + G + EI + + N D+ + L+ + GN+ A
Sbjct: 226 RVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQA 284
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKG 370
V+K+M + V D V N ++ GLC G + ++ +M + G + +V +YN I
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
L + GK +EA ++ + +A D +Y ++I GLC +G +N+A + L
Sbjct: 345 LCKEGKFDEACDL-HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+V ++ +I+ + A V++LM G K N + N LI G++K L
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 46/269 (17%)
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
E +F NV+ Y ++ L R ES+ + K + + +SS++ L G LD
Sbjct: 85 EAIF-NVLDY-ILKSSLDRLASLRESVC---QTKSFDYDDCLSIHSSIMRDLCLQGKLDA 139
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIK 369
A + K MI V P ++T N +LNGLCK G +E++ L EM + G S N +SYN IK
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC--------------------- 408
GL V++A+ ++ + + + + T I++H LC
Sbjct: 200 GLCSVNNVDKALYLFN-TMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 409 ------------------KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
KNG + +AL+V +E + D Y+ +I LC +
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
A G + M KRG + N LI K
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ A K DEA +L M G P S+ ++ + RA +F
Sbjct: 340 TLISALCKEGKFDEACDLHGTMQN-GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ + P V +NV+I + + A +L M G++P+ ++ LI+ K G L
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A V +EM + PD YN+++ G A ++++ +LR P++++Y ++
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ-PDIITYTELV 517
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
RGL GR ++ + R++ D + L +++ A VYK + R
Sbjct: 518 RGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577
Query: 325 PDVVTCNAMLN 335
V+C ++LN
Sbjct: 578 G--VSCPSILN 586
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 185/402 (46%), Gaps = 53/402 (13%)
Query: 112 CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
C+P V ++N L+N + E A F G+ PN +Y LI+ CK +E++ A
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNM----- 226
LL M+ G +PD +YG LI+ G ++ A+ + ++ +RGV PD YNM
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 227 ------------------------------IIDGFFKSGDFLKANEMWERLLREETVFPN 256
+IDGF +SGDF +A +++ L E+ V +
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS-LSVEKGVKVD 519
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
VV +N MI+G R G E+L RM + D FTYS++I G + ++ A ++++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYNIFIKGLF-EN 374
M + P+VVT +++NG C G + + E ++EM + NV++Y I+ L E+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK----------NGYLNKALQVLEEAE 424
+E+A+ WEL++ + + T+ L+ G K +G + + E
Sbjct: 640 STLEKAVYYWELMMTNKCVP-NEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 425 HR----GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
HR G AY+S + LC + A M K+G
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 207/478 (43%), Gaps = 83/478 (17%)
Query: 79 SEDVPLT------LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
+E+V LT +L AYA+ +A+ ++ + ++ P V + NSLL+ S +
Sbjct: 127 NENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRL 186
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
A K + G S + + +L+K +C + + E + L+ G G P+ Y T+
Sbjct: 187 GDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTI 246
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN----EMWERLL 248
I K GD+ A VF E+ +G P + + +I+GF K GDF+ ++ E+ ER L
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 249 REETVF------------------------------PNVVSYNVMIRGLSRCGR------ 272
R F P+V +YN++I L + G+
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 273 -----------------------------FSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
+ + ++ +M + K D+ TY LIHGL
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS 363
G++D A + +I R VSPD N +++GLCK G+ + L+ EM RN++
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD---RNILP 483
Query: 364 ----YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
Y I G +G +EA ++ L + E + VD + +I G C++G L++AL
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSV-EKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ D F YS++I+ K++ + A + M+K CK N LI+GF
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 17/373 (4%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L++AY K D A L +M GC+P + ++ L++ VS + A
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GVSP+ YN+L+ LCK F AK L M + PD + Y TLI+ + GD + A
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+VF E+GV+ DV+ +N +I GF +SG +A R + EE + P+ +Y+ +I
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR-MNEEHLVPDKFTYSTIID 563
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + + +++I+ M+KN+ K +V TY+SLI+G G+ A+ +K+M R + P
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 326 DVVTCNAMLNGLCK-WGKVEESFELWE-EMGQSGSRNVISYNIFIKGLFE--NGKV---- 377
+VVT ++ L K +E++ WE M N +++N ++G + +GKV
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEP 683
Query: 378 EEAMNIWELLLGE-------TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
+ + + L E + + Y + LC +G + A ++ +G
Sbjct: 684 DGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSP 743
Query: 431 DVFAYSSMINALC 443
D +++++++ C
Sbjct: 744 DPVSFAAILHGFC 756
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 38/408 (9%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC P + +N+++ + E A F G P +ET+ +I CK+ +F +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 171 KGLLRWMSGVGLR-----------------------------------PDKFSYGTLINA 195
LL + GLR PD +Y LIN
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
K G A+ DE S++G+ P+ + Y +I + KS ++ A+++ ++ E P
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM-AERGCKP 413
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
++V+Y ++I GL G +++ + ++ D Y+ L+ GL + G A+ ++
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFEN 374
+M+ R + PD +++G + G +E+ +++ + G + +V+ +N IKG +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
G ++EA+ + E L D TY +I G K + A+++ E +V
Sbjct: 534 GMLDEALACMNRM-NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
Y+S+IN C + A M R N LI K S+
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 60/330 (18%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + +L++ F S ++ A K F+ GV +V +N +IK C+ ++A
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
+ M+ L PDKF+Y T+I+ K+ D+ A+++F M + +P+V+ Y +I+GF
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR-CGRFSESLEIWERMKKNERKHDV 292
GDF A E ++ + + V PNVV+Y +IR L++ +++ WE M N+ +
Sbjct: 603 QGDFKMAEETFKEMQLRDLV-PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 293 FTYSSLIHGLSQ------MGNLDGAQR--------------------------------- 313
T++ L+ G + + DG+
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLC 721
Query: 314 ---------VYKD-MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-----GQSGS 358
+++D M+ + SPD V+ A+L+G C G ++ W M G+ G
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ----WRNMDFCNLGEKGL 777
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLL 388
+ Y+ ++ + EA I ++
Sbjct: 778 EVAVRYSQVLEQHLPQPVICEASTILHAMV 807
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 146/334 (43%), Gaps = 39/334 (11%)
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER 246
F+ + + A+ N +V + V+ + ++ + +SG KA E+++
Sbjct: 100 FACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDY 159
Query: 247 LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
++ P+V++ N ++ L + R ++ ++++ M D ++ L+ G+ G
Sbjct: 160 VVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEG 219
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYN 365
++ +++ + G+ P++V N ++ G CK G +E ++ +++E+ G + ++
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279
Query: 366 IFIKGLFENG------------------------------------KVEEAMNIWELLLG 389
I G + G KV+ A +I ++
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN 339
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
+ D TY ILI+ LCK G A+ L+EA +G + +Y+ +I A CK + D
Sbjct: 340 DC--KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 450 DAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
A+ ++ M +RGCK + LI G + + ++
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
W +++ F N + + ++ L+R F+E ++ ++ K S ++H +
Sbjct: 86 WLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYA 145
Query: 304 QMGNLDGAQRVYKDMIGRRVS-PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNV 361
+ G+L A +Y ++ S PDV+ CN++L+ L K ++ ++ ++++EM G S +
Sbjct: 146 ESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN 205
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
S I +KG+ GKVE + E G+ + + Y +I G CK G + A V +
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP-NIVFYNTIIGGYCKLGDIENAYLVFK 264
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
E + +G + + +MIN CKE + ++S + +RG +++ N +ID
Sbjct: 265 ELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 8/339 (2%)
Query: 135 AEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLI 193
A KFF + G + YN L + F A L M G P + + LI
Sbjct: 141 AAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI 200
Query: 194 NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
A V+++M + G +P V YN I+D K+G F A ++E +E+ +
Sbjct: 201 RMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF-KEDGL 259
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
++ ++++GL + GR E LEI +RM++N K DVF Y+++I L GNLD + R
Sbjct: 260 VEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLR 319
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS---YNIFIKG 370
V+ +M + PDV+ ++ GLCK G+VE +EL+ EM G + +I Y + I+G
Sbjct: 320 VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM--KGKQILIDREIYRVLIEG 377
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
+GKV A N+WE L+ +A D Y +I GLC ++KA ++ + A +
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIA-DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
D S ++ A RL D + V+ + + G ++ ++
Sbjct: 437 DFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYL 475
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 194/433 (44%), Gaps = 7/433 (1%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHII 67
++P + +LK + A + F A + GY H A + + A +
Sbjct: 123 VTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHF--RAADQL 180
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
+ +Q SE L++ +A ++ KM + FG +P V +N +++A
Sbjct: 181 PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKK-FGFKPRVFLYNRIMDALV 239
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
+ ++ A + F G+ T+ +L+K LCK E+ +L+ M +PD F
Sbjct: 240 KNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVF 299
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
+Y +I G+L+A+L V+DEM ++PDVM Y ++ G K G + E++ +
Sbjct: 300 AYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
++ + + Y V+I G G+ + +WE + + D+ Y+++I GL +
Sbjct: 360 KGKQILIDREI-YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQ 418
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIF 367
+D A ++++ I + PD T + ++ ++ + + E +G+ G F
Sbjct: 419 VDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQF 478
Query: 368 IKGL-FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
K L + K A++++ +L + +V + Y IL+ L K G + K+L + E
Sbjct: 479 FKLLCADEEKNAMALDVFYILKTKGHGSV--SVYNILMEALYKMGDIQKSLSLFYEMRKL 536
Query: 427 GGDVDVFAYSSMI 439
G + D +YS I
Sbjct: 537 GFEPDSSSYSIAI 549
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 142/305 (46%), Gaps = 3/305 (0%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G + D +Y + G AA ++ + M +G P + ++I + L+
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRV 212
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
++E++ ++ P V YN ++ L + G F +L ++E K++ + T+ L+
Sbjct: 213 YYVYEKM-KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR- 359
GL + G ++ + + M PDV AM+ L G ++ S +W+EM + +
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
+V++Y + GL ++G+VE ++ + G+ L +D Y +LI G +G + A +
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL-IDREIYRVLIEGFVADGKVRSACNL 390
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
E+ G D+ Y+++I LC ++D A + + + + + +P++ ++
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450
Query: 480 NSNLT 484
+ L+
Sbjct: 451 MNRLS 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
++G + D YN ++G F A+++ E L+ + P+ + ++IR + R
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPE-LMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
++E+MKK K VF Y+ ++ L + G D A VY+D + + T +
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ GLCK G++EE E+ + M ++ + +V +Y IK L G ++ ++ +W+ + +
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE- 328
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+ D YG L+ GLCK+G + + ++ E + + +D Y +I + ++ A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+ + G + + N +I G + + +K
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
K+ KHD Y++ + L++ G+ A ++ + M + P ++ +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 344 EESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI 402
+ ++E+M + G + V YN + L +NG + A+ ++E E L +STT+ I
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF-KEDGLVEESTTFMI 268
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
L+ GLCK G + + L++L+ DVFAY++MI L E LD + V M +
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 463 CKLNTHVCNPLIDGFIKNSNL 483
K + L+ G K+ +
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRV 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 152/366 (41%), Gaps = 31/366 (8%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ L+ F + A + +G ++ YN +IK LC + +KA L +
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
L PD + ++ A L+ V + + E G + + FFK L
Sbjct: 431 EEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYP-----VSDYLTQFFK---LL 482
Query: 239 KANEMWERLLREETVF--------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
A+E E+ VF +V YN+++ L + G +SL ++ M+K +
Sbjct: 483 CADE--EKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEP 540
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +YS I + G++ A ++ +I P + ++ GLC+ G+++ L
Sbjct: 541 DSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLV 600
Query: 351 EE-MG--QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
E +G +SG Y + + + + E+ M + + + + + ++ Y +I G+
Sbjct: 601 RECLGNVESGPME-FKYALTVCHVCKGSNAEKVMKVVD-EMNQEGVFINEVIYCAIISGM 658
Query: 408 CKNGYLNKALQVLEEAEHRG--GDVDVFAYSSMINALCKERRLD------DAAGVVSLMD 459
K+G + A +V E + R + D+ Y M+ K++ D G+ S +
Sbjct: 659 SKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLR 718
Query: 460 KRGCKL 465
+GC+L
Sbjct: 719 AKGCRL 724
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 197/439 (44%), Gaps = 42/439 (9%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
KP L LK ++P AL LF H + G+ H ++ ++A A
Sbjct: 45 KPWEEVPFLTDLKEIEDPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNF--DAVD 101
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
I + +N C E + + L++ Y K D+A+++F K+ F C VR+ SL
Sbjct: 102 QILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITS-FDC---VRTIQSL--- 154
Query: 126 FAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
N LI VL E EKAK + LRP+
Sbjct: 155 -----------------------------NTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
S+ LI + D AA +VFDEM E V+P V+ YN +I ++ D KA + E
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
++++ + PN V++ ++++GL G ++E+ ++ M+ K + Y L+ L +
Sbjct: 246 DMIKKR-IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISY 364
G +D A+ + +M RR+ PDVV N ++N LC +V E++ + EM G + N +Y
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
+ I G + +N+ +L + T+ ++ GL K G L+ A VLE
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA-TFVCMVAGLIKGGNLDHACFVLEVMG 423
Query: 425 HRGGDVDVFAYSSMINALC 443
+ A+ ++++ LC
Sbjct: 424 KKNLSFGSGAWQNLLSDLC 442
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 15/361 (4%)
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
E E A F + G + +Y+ LI L K R F+ +LR + +R + +
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
LI K G ++ A++VF +++ + N +I+ +G+ KA ++ +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-AK 178
Query: 250 EETVFPNVVSYNVMIRG-LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ + PN VS+N++I+G L +C + + ++++ M + E + V TY+SLI L + ++
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCD-WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIF 367
A+ + +DMI +R+ P+ VT ++ GLC G+ E+ +L +M G + +++Y I
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 368 IKGLFENGKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
+ L + G+++EA +LLLGE + D Y IL++ LC + +A +VL E +
Sbjct: 298 MSDLGKRGRIDEA----KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVV-SLMDKRGCKL-NTHVCNPLIDGFIKNSN 482
+G + Y MI+ C+ D V+ +++ R C T VC ++ G IK N
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC--MVAGLIKGGN 411
Query: 483 L 483
L
Sbjct: 412 L 412
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 181/364 (49%), Gaps = 3/364 (0%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
VRS L+N + + A F G P++ TY L+ L +++ F L+
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ GL+PD + +INA+++ G+L+ A+++F++M E G +P +N +I G+ K G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
+++ + + +LR+E + PN + N++++ + E+ I +M+ K DV T+
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 296 SSLIHGLSQMGNLDGAQ-RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
++L +++G+ A+ + M+ +V P+V TC ++NG C+ GK+EE+ + M
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+ G N+ +N IKG ++ + + L+ E + D T+ L++ G +
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD-LMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
+ ++ + G D D+ A+S + + + A +++ M K G + N + +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 474 IDGF 477
I G+
Sbjct: 678 ISGW 681
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 203/423 (47%), Gaps = 12/423 (2%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
S +L+N L P A +F H +++ + + + T H ++
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEE---GHKPSLITYT--TLVTALTRQKHFHSLLS 375
Query: 69 AIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
I + D L ++ A ++ D+A+ +F KM + GC+P +FN+L+ +
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM-KESGCKPTASTFNTLIKGY 434
Query: 127 AVSEQWERAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
+ E + + + PN T N+L++ C +R+ E+A ++ M G++PD
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 186 KFSYGTLINAAAKRGDLNAALE-VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
++ TL A A+ G A + + M V+P+V I++G+ + G +A +
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
R+ +E V PN+ +N +I+G E+ + M++ K DV T+S+L++ S
Sbjct: 555 YRM-KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS 613
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
+G++ + +Y DM+ + PD+ + + G + G+ E++ ++ +M + G R NV+
Sbjct: 614 VGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVI 673
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
Y I G G++++AM +++ + G L+ + TTY LI G + KA ++L++
Sbjct: 674 YTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Query: 424 EHR 426
E +
Sbjct: 734 EGK 736
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 15/277 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL KAYA+ A ++ +P VR+ +++N + + E A +FF
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV PN+ +N LIK + + ++ M G++PD ++ TL+NA + GD+
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
E++ +M E G++PD+ ++++ G+ ++G+ KA ++ + +R+ V PNVV Y +I
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ-MRKFGVRPNVVIYTQII 678
Query: 265 RGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
G G ++++++++M ++ TY +LI G + A+ + KDM G+ V
Sbjct: 679 SGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
P T + +G W+ +G S S +
Sbjct: 739 VPTRKTMQLIADG-------------WKSIGVSNSND 762
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEI 279
DV +++G + G +A+ ++ L+ EE P++++Y ++ L+R F L +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLI-EEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
+++KN K D ++++I+ S+ GNLD A ++++ M P T N ++ G K
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 340 WGKVEESFELWE-----EMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
GK+EES L + EM Q R + NI ++ K+EEA NI + +
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDR---TCNILVQAWCNQRKIEEAWNIV-YKMQSYGVK 492
Query: 395 VDSTTYGILIHGLCKNGYLNKALQ-VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
D T+ L + G A ++ H +V +++N C+E ++++A
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFI 478
M + G N V N LI GF+
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFL 577
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
T +V S ++ GL GR E+ I+ + + K + TY++L+ L++ +
Sbjct: 314 TTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL 373
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS-YNIFIKG 370
+ + + PD + NA++N + G ++++ +++E+M +SG + S +N IKG
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
+ GK+EE+ + +++L + L + T IL+ C + +A ++ + + G
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 431 DVFAYSSMINALCKERRLDDAAG-VVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
DV ++++ A + A ++ M K N C +++G+ + +
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 221/467 (47%), Gaps = 24/467 (5%)
Query: 1 MVDLPKPLSPHRLLNLLKSEKNPHSALQLFQHAT-RHPGYTHSSAVLQHVLRRVASDPTL 59
+V P+ L+P L +LK +KNP +AL+LF+ A R P Y H+ +V ++ + +
Sbjct: 3 VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
L ++I ++ +C C + V ++++ +++ ++A++LF+ + F C SF
Sbjct: 63 L-EMKYVIERMKE-DSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHE-FNCVNWSLSF 119
Query: 120 NSLLNAFAVSEQWERAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
++LL + E A F Y V+ + N+L+KVLC+ + A + + M+
Sbjct: 120 DTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMN 179
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEV----FDEMSERGVEPDVMCYNMIIDGFFKS 234
G PD+ SY L+ G L A + F +S++G D++ Y +++D +
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF- 293
G+ A E+ ++LR+ P +++ G + S E ER+K+ + +
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYHHI------EAGHWESSSEGIERVKRLLTETLIRG 293
Query: 294 ------TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+YS++ L + G L + V M + P A + LC+ GK++E+
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 348 ELW-EEMGQSGSRNVIS-YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
+ +EM Q + YN+ IKGL ++GK EA+ + + + + + TY L+
Sbjct: 354 SVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVD 413
Query: 406 GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
GLC++G +A QV+EE + V Y MI LC R +A
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 4/256 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF--AVSEQWERAEKFFAYFD 143
LL A D+A+ + K+ R G + R ++ + + SE ER ++
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRK-GLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G P +++Y+ + L ++ + + + +L M G P F YG + A + G L
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 204 AALEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
A+ V + EM + P V YN++I G G ++A +++ ++ + N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ GL R G+F E+ ++ E M V TY +I GL M A ++M+ +
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 323 VSPDVVTCNAMLNGLC 338
+ P+ A+ +C
Sbjct: 471 MVPESSVWKALAESVC 486
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 148/359 (41%), Gaps = 21/359 (5%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E E+F +Y N Y +I +L K + K ++ M + ++
Sbjct: 34 EAKERFPSY------GHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I ++ G L A+ +F + E + ++ ++ K + A ++ +
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
V + + N++++ L + R + ++++ M D +Y L+ G G L+ A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 313 RVYKDMIGRRVSP----DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIF 367
+ M R D+V +L+ LC G+V+++ E+ ++ + G + Y+
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 368 IKGLFENGKVEEAMNIWELLLGETAL-----AVDSTTYGILIHGLCKNGYLNKALQVLEE 422
G +E+ E + + LL ET + +DS Y + L + G L + +VL
Sbjct: 268 EAGHWESSS--EGIERVKRLLTETLIRGAIPCLDS--YSAMATDLFEEGKLVEGEEVLLA 323
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG-CKLNTHVCNPLIDGFIKN 480
+G + F Y + + ALC+ +L +A V++ +G C V N LI G +
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 221/467 (47%), Gaps = 24/467 (5%)
Query: 1 MVDLPKPLSPHRLLNLLKSEKNPHSALQLFQHAT-RHPGYTHSSAVLQHVLRRVASDPTL 59
+V P+ L+P L +LK +KNP +AL+LF+ A R P Y H+ +V ++ + +
Sbjct: 3 VVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRV 62
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
L ++I ++ +C C + V ++++ +++ ++A++LF+ + F C SF
Sbjct: 63 L-EMKYVIERMKE-DSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHE-FNCVNWSLSF 119
Query: 120 NSLLNAFAVSEQWERAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
++LL + E A F Y V+ + N+L+KVLC+ + A + + M+
Sbjct: 120 DTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMN 179
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEV----FDEMSERGVEPDVMCYNMIIDGFFKS 234
G PD+ SY L+ G L A + F +S++G D++ Y +++D +
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF- 293
G+ A E+ ++LR+ P +++ G + S E ER+K+ + +
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYHHI------EAGHWESSSEGIERVKRLLTETLIRG 293
Query: 294 ------TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+YS++ L + G L + V M + P A + LC+ GK++E+
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 348 ELW-EEMGQSGSRNVIS-YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
+ +EM Q + YN+ IKGL ++GK EA+ + + + + + TY L+
Sbjct: 354 SVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVD 413
Query: 406 GLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
GLC++G +A QV+EE + V Y MI LC R +A
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 4/256 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF--AVSEQWERAEKFFAYFD 143
LL A D+A+ + K+ R G + R ++ + + SE ER ++
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRK-GLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G P +++Y+ + L ++ + + + +L M G P F YG + A + G L
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 204 AALEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
A+ V + EM + P V YN++I G G ++A +++ ++ + N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ GL R G+F E+ ++ E M V TY +I GL M A ++M+ +
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 323 VSPDVVTCNAMLNGLC 338
+ P+ A+ +C
Sbjct: 471 MVPESSVWKALAESVC 486
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 148/359 (41%), Gaps = 21/359 (5%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E E+F +Y N Y +I +L K + K ++ M + ++
Sbjct: 34 EAKERFPSY------GHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I ++ G L A+ +F + E + ++ ++ K + A ++ +
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
V + + N++++ L + R + ++++ M D +Y L+ G G L+ A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 313 RVYKDMIGRRVSP----DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIF 367
+ M R D+V +L+ LC G+V+++ E+ ++ + G + Y+
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 368 IKGLFENGKVEEAMNIWELLLGETAL-----AVDSTTYGILIHGLCKNGYLNKALQVLEE 422
G +E+ E + + LL ET + +DS Y + L + G L + +VL
Sbjct: 268 EAGHWESSS--EGIERVKRLLTETLIRGAIPCLDS--YSAMATDLFEEGKLVEGEEVLLA 323
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG-CKLNTHVCNPLIDGFIKN 480
+G + F Y + + ALC+ +L +A V++ +G C V N LI G +
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 176/323 (54%), Gaps = 13/323 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE---KFFAY 141
TL++ AK M D+A+ +F +M GCRP +++ LLN Q R + +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVET-GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+ T G+ Y+ L++ L K +A L M ++ ++ SY +++ + G
Sbjct: 369 YMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
A+E+ ++ E+GV D M YN + K ++++E++ +++ P++ +YN
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM-KKDGPSPDIFTYN 481
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++I R G E++ I+E +++++ K D+ +Y+SLI+ L + G++D A +K+M +
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
++PDVVT + ++ K +VE ++ L+EEM G + N+++YNI + L +NG+ EA
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 381 MNIWELLLGETALAVDSTTYGIL 403
++++ + + L DS TY +L
Sbjct: 602 VDLYS-KMKQQGLTPDSITYTVL 623
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 197/400 (49%), Gaps = 18/400 (4%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL+AY + +A +++ ++ R G + + ++N LL+A A + E+A + F
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRR-GGHKLDIFAYNMLLDALA---KDEKACQVFEDMKKR 264
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ TY ++I+ + + + ++A GL M GL + Y TL+ AK ++ A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++VF M E G P+ Y+++++ G ++ + + E + + + + SY ++R
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE--ISKRYMTQGIYSY--LVR 380
Query: 266 GLSRCGRFSES----LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
LS+ G SE+ ++W K ER +Y S++ L G A + + +
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERD----SYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEA 380
V D + N + + L K ++ +L+E+M + G S ++ +YNI I G+V+EA
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+NI+E L + D +Y LI+ L KNG +++A +E + +G + DV YS+++
Sbjct: 497 INIFE-ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
K R++ A + M +GC+ N N L+D KN
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 215/487 (44%), Gaps = 25/487 (5%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
+P +LKS +P A++ F+ Y+ + L + + + S L +
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRS 157
Query: 69 AIEAAQNCNCSEDVPLT--LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
+++ N ++ L+ + L L +K D + ++ LL A+
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD----LKMNSFTYKCLLQAY 213
Query: 127 AVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK 186
S + +A + G ++ YN+L+ L K EKA + M R D+
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDE 270
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER 246
++Y +I + G + A+ +F+EM G+ +V+ YN ++ K KA +++ R
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 247 LLREETVFPNVVSYNVMIRGLSRCG---RFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
++ E PN +Y++++ L G R +EI +R YS L+ LS
Sbjct: 331 MV-ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLS 383
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVI 362
++G++ A R++ DM V + + +ML LC GK E+ E+ ++ + G + +
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 363 SYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
YN L GK+++ +I +L + + + D TY ILI + G +++A+ +
Sbjct: 444 MYNTVFSAL---GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
EE E D+ +Y+S+IN L K +D+A M ++G + + L++ F K
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 481 SNLTLLF 487
+ + +
Sbjct: 561 ERVEMAY 567
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 198/397 (49%), Gaps = 13/397 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+K Y + DEA + R+M R G P V ++NSL++ A + R + F
Sbjct: 53 TLIKGYTRFIGIDEAYAVTRRM-REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLH 111
Query: 145 AGVSPNVETYNVLIKVLCK-KREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+G+SP++ +YN L+ K R E K L + GL P +Y L++A K G +
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A+E+F + R V+P++M YN++I+G KS + M R L++ PN V+Y M
Sbjct: 172 NAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMM-RELKKSGYTPNAVTYTTM 229
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI--GR 321
++ + R + L+++ +MKK D F +++ L + G + A +++ G
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
R S D+V+ N +LN K G ++ +L EE+ G + + ++ I + GL G A
Sbjct: 290 R-SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+GE + T LI GLCK G++++A+++ E R D F Y+S+++
Sbjct: 349 EKHLA-CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVH 403
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
LCK+ RL A+ ++ +G K+ + ++ G
Sbjct: 404 NLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI 440
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 182/369 (49%), Gaps = 4/369 (1%)
Query: 114 PGVRS--FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
PG+ + N +N+ ERAE GV P+V TYN LIK + ++A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
+ R M G+ PD +Y +LI+ AAK LN L++FDEM G+ PD+ YN ++ +
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
FK G +A ++ + + P + +YN+++ L + G ++E+++ + K+ K +
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPE 187
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
+ TY+ LI+GL + + + +++ +P+ VT ML K ++E+ +L+
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 352 EMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
+M + G + + + + L + G+ EEA L+ + D +Y L++ K+
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKD 307
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC 470
G L+ +LEE E +G D + ++ ++N L A ++ + + G + + C
Sbjct: 308 GNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTC 367
Query: 471 NPLIDGFIK 479
N LIDG K
Sbjct: 368 NCLIDGLCK 376
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
DV TY++LI G ++ +D A V + M + PDV T N++++G K + +L+
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
+EM SG S ++ SYN + F+ G+ EA I + L TY IL+ LCK
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+G+ + A+++ + + R ++ Y+ +IN LCK RR+ ++ + K G N
Sbjct: 167 SGHTDNAIELFKHLKSRVKP-ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 470 CNPLIDGFIKNSNL 483
++ + K +
Sbjct: 226 YTTMLKMYFKTKRI 239
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 214/454 (47%), Gaps = 31/454 (6%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQH------VLRRVASDPTLLPH 62
S ++ L+ +K+ AL+ F+ A+ PG+ HS + + V RR + LL
Sbjct: 42 SDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDE 101
Query: 63 APHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
P IG + + +T+++ + + + +++ + + FG +P ++ FNS+
Sbjct: 102 MPDSIGLPP-------DDAIFVTIIRGFGRARLIKRVISVVDLVSK-FGIKPSLKVFNSI 153
Query: 123 LNAFAVSEQWERAEKFFAY-FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
L+ V E + A +FF +G+ +V TY +L+K L LL+ M G
Sbjct: 154 LDVL-VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSG 212
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ P+ Y TL++A K G + A + EM E P+ + +N++I + +++
Sbjct: 213 VAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSM 268
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
+ E+ V P+VV+ ++ L GR SE+LE+ ER++ K DV ++L+ G
Sbjct: 269 VLLEKCFSLGFV-PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-N 360
+G + AQR + +M + P+V T N ++ G C G ++ + + + +M R N
Sbjct: 328 YCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLL-GETALAVDSTTYGILIHGLCKNGYLNKALQV 419
++N I+GL G+ ++ + I E++ +T Y +I+G K AL+
Sbjct: 388 FATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEF 447
Query: 420 LEEAEH---RGGDVDVFAYSSMINALCKERRLDD 450
L + E R D S + +LC++ +DD
Sbjct: 448 LLKMEKLFPRAVD-----RSFKLISLCEKGGMDD 476
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 41/326 (12%)
Query: 153 TYNVLIKVLCKKREFEKAKGLLRWM-SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
TY L LC R F+ LL M +GL PD + T+I + + + V D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
+S+ G++P + +N I+D K D A E + R
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTR------------------------- 171
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+M + DV+TY L+ GLS + ++ + M V+P+ V N
Sbjct: 172 ----------KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+L+ LCK GKV + L EM + N +++NI I K+ ++M + E
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMKEP---NDVTFNILISAYCNEQKLIQSMVLLEKCFS-L 277
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
D T ++ LC G +++AL+VLE E +GG VDV A ++++ C ++ A
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGF 477
M+++G N N LI G+
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 18/330 (5%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EAL + +++ G + V + N+L+ + + A++FF + G PNVETYN+L
Sbjct: 301 EALEVLERVESK-GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLL 359
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG- 216
I C + A M +R + ++ TLI + G + L++ + M +
Sbjct: 360 IAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDT 419
Query: 217 -----VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
++P YN +I GF+K + + E LL+ E +FP V + + L G
Sbjct: 420 VHGARIDP----YNCVIYGFYKEN---RWEDALEFLLKMEKLFPRAVDRSFKLISLCEKG 472
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+ +++M + LIH SQ G ++ + + DM+ R P T N
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFN 532
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
A++ G CK KV + E+M + G + SYN ++ L G +++A ++ ++ E
Sbjct: 533 AVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV-E 591
Query: 391 TALAVDSTTYGILIHGLCKNG--YLNKALQ 418
++ D + + L+ L + ++N +LQ
Sbjct: 592 KSIVPDPSMWSSLMFCLSQKTAIHVNSSLQ 621
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 168/331 (50%), Gaps = 6/331 (1%)
Query: 148 SPNVE-TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
S NVE Y +I LC+ R A ++ M GL+P + SY +I+ K G A
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY 362
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
++ +E SE P Y ++++ K D KA + E +LR+E + YN+ +RG
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRI-YNIYLRG 421
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI-GRRVSP 325
L +E L + M + + + D +T +++I+GL +MG +D A +V DM+ G+ +P
Sbjct: 422 LCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS--RNVISYNIFIKGLFENGKVEEAMNI 383
D VT N ++ GL G+ EE+ ++ + V++YN I+GLF+ K +EAM++
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ L + ++ DSTTY I+I GLC ++ A + ++ G D F Y++ + LC
Sbjct: 542 FGQL-EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
+ L DA + + G N N +I
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVI 631
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 188/434 (43%), Gaps = 50/434 (11%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
A R PDEAL + + + G RP + +S++++ + +++ A + F F +G P+
Sbjct: 66 AVRRNPDEALRILDGLC-LRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPD 124
Query: 151 VETYNVLIKVLCKKRE-------------FEK------------------------AKGL 173
T NV+I L R F+K A L
Sbjct: 125 ERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKL 184
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
+ M G PD ++ TLI + +L A +VFDEM G+ P+ + +++I GF K
Sbjct: 185 VFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK 244
Query: 234 SGDFLKA----NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
D E+WE + E ++ ++ + R G F++ EI E M E
Sbjct: 245 MRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESV 304
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+ F Y +I L + GA R+ M + + P + NA+++GLCK G +++L
Sbjct: 305 NVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQL 364
Query: 350 WEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
EE + + +Y + ++ L + +A N+ EL+L + A + Y I + GLC
Sbjct: 365 LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEG-ADRTRIYNIYLRGLC 423
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV-SLMDKRGC---- 463
+ L VL D + +++IN LCK R+DDA V+ +M + C
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDA 483
Query: 464 -KLNTHVCNPLIDG 476
LNT +C L G
Sbjct: 484 VTLNTVMCGLLAQG 497
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 38/330 (11%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G +P S+N++++ RA + P+ TY +L++ LCK+ + KA
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 171 KGLLR----------------WMSGVGL-------------------RPDKFSYGTLINA 195
+ +L ++ G+ + RPD+++ T+IN
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 196 AAKRGDLNAALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
K G ++ A++V D+M + + PD + N ++ G G +A ++ R++ E +
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P VV+YN +IRGL + + E++ ++ +++K D TY+ +I GL +D A++
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFE 373
+ D+I D A L GLC+ G + ++ ++ SG+ NV+ YN I
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGIL 403
+G EA I E + + A D+ T+ IL
Sbjct: 637 SGLKREAYQILE-EMRKNGQAPDAVTWRIL 665
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 164 KREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMC 223
+R ++A +L + G RPD + ++I++ G + A F G PD
Sbjct: 68 RRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERT 127
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVF-PNVVSYNVMIRGLSRCGRFSESLEIWER 282
N+II S + + RL+ + F P++ +YN ++ L R ++ ++
Sbjct: 128 CNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFD 187
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
M+ DV T+++LI G ++ L+ A +V+ +M + P+ +T + ++ G K
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRD 247
Query: 343 VEESF----ELWEEMGQ--SGSRNVISYNIFIKGLFENG------KVEEAMNIWELLLGE 390
VE ELWE M S ++ + + G ++ E M++ E + E
Sbjct: 248 VETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE 307
Query: 391 TALA--VDS--------------------------TTYGILIHGLCKNGYLNKALQVLEE 422
A +DS T+Y +IHGLCK+G +A Q+LEE
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+ Y ++ +LCKE A V+ LM ++ T + N + G N
Sbjct: 368 GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 483 LTLLFKSL 490
T + L
Sbjct: 428 PTEILNVL 435
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ + +EAL++ ++ +PGV ++N+++ + + A F +
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGL---LRWMSGVGLRPDKFSYGTLINAAAKRGD 201
A V+ + TY ++I LC + + AK + W SG R D F Y + + G
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG---RHDAFVYAAFLKGLCQSGY 604
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
L+ A ++++ G P+V+CYN +I +SG +A ++ E +R+ P+ V++
Sbjct: 605 LSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEE-MRKNGQAPDAVTWR 663
Query: 262 VM 263
++
Sbjct: 664 IL 665
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 7/392 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ Y D+ L M +G RP + +F ++ + + A
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKH-YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+S + + + +I CK + E+A ++ + LRP+ F Y + ++ GD+ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+F E+ E G+ PD +CY +IDG+ G KA + + LL+ P++ + ++I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP-PSLTTSTILIG 451
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
SR G S++ ++ MK K DV TY++L+HG + L+ + +M +SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
DV T N +++ + G ++E+ E+ E+ + G + +++ I G + G +EA +W
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + + D T L+HG CK + KA+ + + G DV Y+++I+ C
Sbjct: 572 -FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCS 630
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
++ A ++ LM +RG N + L+ G
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P + ++++ + + ++A ++F +G P++ T +LI + A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + R M GL+ D +Y L++ K LN E+ DEM G+ PDV YN++I
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
G +ANE+ L+R V P+ +++ +I G S+ G F E+ +W M K
Sbjct: 523 MVVRGYIDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
DV T S+L+HG + ++ A ++ ++ + PDVV N +++G C G +E++ EL
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 351 EEMGQSGSR-NVISYNIFIKGL----FENGKVEEAMNIWELLLGETALA 394
M Q G N +++ + GL F N + +M + E+++ + L
Sbjct: 642 GLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLT 690
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 174/405 (42%), Gaps = 42/405 (10%)
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
E V L+ + + AL L K+D+ FG P SLL E A +F
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQ-FGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ + G N ++ I+ C F+K LL M G+RPD ++ I+ K
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
G L A V ++ G+ D + + +IDGF K G + E + S
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG-------------KPEEAIKLIHS 366
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ R++ N +F YSS + + G++ A +++++
Sbjct: 367 F---------------------RLRPN-----IFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
+ PD V M++G C G+ +++F+ + + +SG+ ++ + I I G +
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
+A +++ + E L +D TY L+HG K LNK ++++E G DV Y+ +
Sbjct: 461 DAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
I+++ +D+A ++S + +RG +T +I GF K +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 10/265 (3%)
Query: 75 NCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
+C C T++ Y D+A F + + G P + + L+ A +
Sbjct: 407 DCVCYT----TMIDGYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISD 461
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
AE F T G+ +V TYN L+ K + K L+ M G+ PD +Y LI+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREET 252
+ RG ++ A E+ E+ RG P + + +I GF K GDF +A +W + LR +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK- 580
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
P+VV+ + ++ G + R +++ ++ ++ K DV Y++LIHG +G+++ A
Sbjct: 581 --PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGL 337
+ M+ R + P+ T +A++ GL
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 7/392 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ Y D+ L M +G RP + +F ++ + + A
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKH-YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF 335
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+S + + + +I CK + E+A ++ + LRP+ F Y + ++ GD+ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEA---IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+F E+ E G+ PD +CY +IDG+ G KA + + LL+ P++ + ++I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP-PSLTTSTILIG 451
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
SR G S++ ++ MK K DV TY++L+HG + L+ + +M +SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
DV T N +++ + G ++E+ E+ E+ + G + +++ I G + G +EA +W
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + + D T L+HG CK + KA+ + + G DV Y+++I+ C
Sbjct: 572 -FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCS 630
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
++ A ++ LM +RG N + L+ G
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P + ++++ + + ++A ++F +G P++ T +LI + A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + R M GL+ D +Y L++ K LN E+ DEM G+ PDV YN++I
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
G +ANE+ L+R V P+ +++ +I G S+ G F E+ +W M K
Sbjct: 523 MVVRGYIDEANEIISELIRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
DV T S+L+HG + ++ A ++ ++ + PDVV N +++G C G +E++ EL
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 351 EEMGQSGSR-NVISYNIFIKGL----FENGKVEEAMNIWELLLGETALA 394
M Q G N +++ + GL F N + +M + E+++ + L
Sbjct: 642 GLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLT 690
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 174/405 (42%), Gaps = 42/405 (10%)
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
E V L+ + + AL L K+D+ FG P SLL E A +F
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQ-FGIFPSRGVCISLLKEILRVHGLELAREFV 259
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ + G N ++ I+ C F+K LL M G+RPD ++ I+ K
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
G L A V ++ G+ D + + +IDGF K G + E + S
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG-------------KPEEAIKLIHS 366
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ R++ N +F YSS + + G++ A +++++
Sbjct: 367 F---------------------RLRPN-----IFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
+ PD V M++G C G+ +++F+ + + +SG+ ++ + I I G +
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
+A +++ + E L +D TY L+HG K LNK ++++E G DV Y+ +
Sbjct: 461 DAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
I+++ +D+A ++S + +RG +T +I GF K +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 10/265 (3%)
Query: 75 NCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
+C C T++ Y D+A F + + G P + + L+ A +
Sbjct: 407 DCVCYT----TMIDGYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISD 461
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
AE F T G+ +V TYN L+ K + K L+ M G+ PD +Y LI+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREET 252
+ RG ++ A E+ E+ RG P + + +I GF K GDF +A +W + LR +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK- 580
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
P+VV+ + ++ G + R +++ ++ ++ K DV Y++LIHG +G+++ A
Sbjct: 581 --PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGL 337
+ M+ R + P+ T +A++ GL
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 208/416 (50%), Gaps = 12/416 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFR--KMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
L++ ++R + +N+F+ K+ + + R + +N ++ A ++A F
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFFEM 169
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
P+ ETY+ LI + ++ A L+ M + P + +Y LINA G+
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
ALEV +M++ GV PD++ +N+++ + + KA +E L++ V P+ ++N+
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKGAKVRPDTTTFNI 288
Query: 263 MIRGLSRCGRFSESLEIWERM--KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
+I LS+ G+ S++L+++ M K+ E + DV T++S++H S G ++ + V++ M+
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEE 379
+ P++V+ NA++ G + + ++ Q+G +V+SY + + + +
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
A ++ L++ + + TY LI NG+L +A+++ + E G +V + +++
Sbjct: 409 AKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 440 NALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL---TLLFKSLGK 492
A + ++ + V+S RG LNT N I +I + L L++S+ K
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 193/431 (44%), Gaps = 43/431 (9%)
Query: 74 QNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q +C D L+ A+ + A+NL M R P ++N+L+NA S
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA-AIAPSRSTYNNLINACGSSGN 228
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
W A + GV P++ T+N+++ R++ KA M G +RPD ++
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVE--PDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
+I +K G + AL++F+ M E+ E PDV+ + I+ + G+ ++E ++
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV- 347
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
E + PN+VSYN ++ + G +L + +K+N DV +Y+ L++ +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR---------- 359
A+ V+ M R P+VVT NA+++ G + E+ E++ +M Q G +
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 360 --------------------------NVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
N +YN I ++E+A+ +++ + +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
A DS T+ ILI G C+ +A+ L+E E + YSS++ A K+ ++ +A
Sbjct: 528 A-DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 454 VVSLMDKRGCK 464
+ + M GC+
Sbjct: 587 IFNQMKMAGCE 597
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 153/341 (44%), Gaps = 10/341 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ AY EA+ +FR+M++ G +P V S +LL A + S++ + + +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++ N YN I E EKA L + M ++ D ++ LI+ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ EM + + Y+ ++ + K G +A ++ + ++ P+V++Y M+
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ-MKMAGCEPDVIAYTSML 607
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ ++ ++ E++ M+ N + D S+L+ ++ G V D++ +
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEI 666
Query: 325 PDV----VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
P + N L +W + + ++ + S S + + + + G ++GKVE
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG--KSGKVEAM 724
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
M ++ ++ + + ++ TY IL+ L G K ++VLE
Sbjct: 725 MKLFYKIIA-SGVGINLKTYAILLEHLLAVGNWRKYIEVLE 764
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 185/408 (45%), Gaps = 31/408 (7%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY---- 141
L ++ K + D A +F M GV N LL F VS E+ + FA
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKS-----DGVSPNNRLL-GFLVSSFAEKGKLHFATALLL 162
Query: 142 --FDTAGVSPNVETYNVLIKVLCKKREFEKAKGL----LRWMSGVGLRPDKFSYGTLINA 195
F+ G V N L+ L K E A L LR+ S D ++ LI
Sbjct: 163 QSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSC----NDTKTFNILIRG 215
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
G ALE+ MS G EPD++ YN +I GF KS + KA+EM++ + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+VV+Y MI G + G+ E+ + + M + T++ L+ G ++ G + A+ +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFEN 374
MI PDVVT ++++G C+ G+V + F LWEEM G N +Y+I I L
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 375 GKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
++ +A LLG+ A + Y +I G CK G +N+A ++EE E + D
Sbjct: 396 NRLLKARE----LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++ +I C + R+ +A + M GC + + L+ +K
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 6/329 (1%)
Query: 153 TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM 212
TYN+L + LCK + A + M G+ P+ G L+++ A++G L+ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
E VE M N +++ K A ++++ LR ++ + ++N++IRGL G+
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGK 221
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM-IGRRVSPDVVTCN 331
++LE+ M + D+ TY++LI G + L+ A ++KD+ G SPDVVT
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIWELLLGE 390
+M++G CK GK+ E+ L ++M + G +++N+ + G + G++ A I ++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
D T+ LI G C+ G +++ ++ EE RG + F YS +INALC E RL
Sbjct: 342 GCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
A ++ + + + NP+IDGF K
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 152/325 (46%), Gaps = 39/325 (12%)
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
Q+CN ++ + L++ ++AL L M FGC P + ++N+L+ F S +
Sbjct: 201 QSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYNTLIQGFCKSNELN 258
Query: 134 RAEKFFAYFDTAGV-SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+A + F + V SP+V TY +I CK + +A LL M +G+ P ++ L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 193 INAAAKRGDLNAALEV-----------------------------------FDEMSERGV 217
++ AK G++ A E+ ++EM+ RG+
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
P+ Y+++I+ LKA E+ +L ++ + P YN +I G + G+ +E+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKD-IIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
I E M+K + K D T++ LI G G + A ++ M+ SPD +T +++L+ L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 338 CKWGKVEESFELWEEMGQSGSRNVI 362
K G +E++ L + + S NV+
Sbjct: 498 LKAGMAKEAYHLNQIARKGQSNNVV 522
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 124/266 (46%), Gaps = 4/266 (1%)
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN++ K+G A +M+E ++ + V PN ++ + G+ + + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFE-CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
+ E + +SL++ L ++ ++ A +++ + + + D T N ++ GLC GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 344 EESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI 402
E++ EL M G ++++YN I+G ++ ++ +A +++ + + + D TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+I G CK G + +A +L++ G ++ +++ K + A + M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 463 CKLNTHVCNPLIDGFIKNSNLTLLFK 488
C + LIDG+ + ++ F+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFR 368
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 185/408 (45%), Gaps = 31/408 (7%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY---- 141
L ++ K + D A +F M GV N LL F VS E+ + FA
Sbjct: 109 LTRSLCKAGLHDLAGQMFECMKS-----DGVSPNNRLL-GFLVSSFAEKGKLHFATALLL 162
Query: 142 --FDTAGVSPNVETYNVLIKVLCKKREFEKAKGL----LRWMSGVGLRPDKFSYGTLINA 195
F+ G V N L+ L K E A L LR+ S D ++ LI
Sbjct: 163 QSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSC----NDTKTFNILIRG 215
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
G ALE+ MS G EPD++ YN +I GF KS + KA+EM++ + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+VV+Y MI G + G+ E+ + + M + T++ L+ G ++ G + A+ +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFEN 374
MI PDVVT ++++G C+ G+V + F LWEEM G N +Y+I I L
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 375 GKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
++ +A LLG+ A + Y +I G CK G +N+A ++EE E + D
Sbjct: 396 NRLLKARE----LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++ +I C + R+ +A + M GC + + L+ +K
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 6/329 (1%)
Query: 153 TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM 212
TYN+L + LCK + A + M G+ P+ G L+++ A++G L+ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
E VE M N +++ K A ++++ LR ++ + ++N++IRGL G+
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGK 221
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM-IGRRVSPDVVTCN 331
++LE+ M + D+ TY++LI G + L+ A ++KD+ G SPDVVT
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIWELLLGE 390
+M++G CK GK+ E+ L ++M + G +++N+ + G + G++ A I ++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
D T+ LI G C+ G +++ ++ EE RG + F YS +INALC E RL
Sbjct: 342 GCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
A ++ + + + NP+IDGF K
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 152/325 (46%), Gaps = 39/325 (12%)
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
Q+CN ++ + L++ ++AL L M FGC P + ++N+L+ F S +
Sbjct: 201 QSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMSG-FGCEPDIVTYNTLIQGFCKSNELN 258
Query: 134 RAEKFFAYFDTAGV-SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+A + F + V SP+V TY +I CK + +A LL M +G+ P ++ L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 193 INAAAKRGDLNAALEV-----------------------------------FDEMSERGV 217
++ AK G++ A E+ ++EM+ RG+
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
P+ Y+++I+ LKA E+ +L ++ + P YN +I G + G+ +E+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKD-IIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
I E M+K + K D T++ LI G G + A ++ M+ SPD +T +++L+ L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 338 CKWGKVEESFELWEEMGQSGSRNVI 362
K G +E++ L + + S NV+
Sbjct: 498 LKAGMAKEAYHLNQIARKGQSNNVV 522
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 124/266 (46%), Gaps = 4/266 (1%)
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN++ K+G A +M+E ++ + V PN ++ + G+ + + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFE-CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
+ E + +SL++ L ++ ++ A +++ + + + D T N ++ GLC GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 344 EESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGI 402
E++ EL M G ++++YN I+G ++ ++ +A +++ + + + D TY
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+I G CK G + +A +L++ G ++ +++ K + A + M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 463 CKLNTHVCNPLIDGFIKNSNLTLLFK 488
C + LIDG+ + ++ F+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFR 368
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 210/468 (44%), Gaps = 65/468 (13%)
Query: 7 PLSPHRLLNLLKSEK-NPHSALQLFQHA-TRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P+S +L +L+ +P L F+ + PGY HS+ + R V LL P
Sbjct: 54 PISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCR-TGLLGEVP 112
Query: 65 HIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
++G SM ++ +NL + M ++ LL+
Sbjct: 113 DLLG-------------------------SMKEDGVNLDQTMAKI------------LLD 135
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM------- 177
+ S ++E A Y + G N Y+ ++ L KK E A +L +
Sbjct: 136 SLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNH 195
Query: 178 ----SG----VGLRPDKFSYGTLINAAAKRGDLNAALE-VFDEM-SERGVEPDVMCYNMI 227
+G V P + L+ +R D+ + + VF+++ + + D YN+
Sbjct: 196 SDDDTGRVIIVSYLPGTVAVNELL-VGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNIC 254
Query: 228 IDGFFKSGDFLKANEMWERLLREETVF-----PNVVSYNVMIRGLSRCGRFSESLEIWER 282
I GF GD A +++ + +V+ P++ +YN +I L G+ ++L +W+
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
+K + + D TY LI G + +D A R+Y +M PD + N +L+G K K
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 343 VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
V E+ +L+E+M Q G R + +YNI I GLF NG+ E ++ L + VD+ T+
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF-CDLKKKGQFVDAITFS 433
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
I+ LC+ G L A++++EE E RG VD+ SS++ K+ R D
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 167/392 (42%), Gaps = 58/392 (14%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G + Y+ + + +C+ + LL M G+ D+ L+++ + G +A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE-------------- 251
L V D M E G + Y+ ++ K + A + +LL
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDG 310
+ P V+ N ++ GL R SE ++E++K +R K D ++Y+ IHG G+LD
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 311 AQRVYKDM------IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR----- 359
A ++K+M G PD+ T N++++ LC +GK +++ +W+E+ SG
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 360 -------------------------------NVISYNIFIKGLFENGKVEEAMNIWELLL 388
+ I YN + G + KV EA ++E ++
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
E A TY ILI GL +NG + + + +G VD +S + LC+E +L
Sbjct: 387 QEGVRA-SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 449 DDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ A +V M+ RG ++ + L+ GF K
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQ 477
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 97 DEALNLFRKM---DRVFGCR--PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNV 151
D AL+LF++M V+G P + ++NSL++ + + + A + +G P+
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 152 ETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
TY +LI+ CK + A + M G PD Y L++ K + A ++F++
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
M + GV YN++IDG F++G ++ L +++ F + ++++++ L R G
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL-KKKGQFVDAITFSIVGLQLCREG 443
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+ ++++ E M+ D+ T SSL+ G + G D +++ K + + P+V+ N
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Query: 332 A 332
A
Sbjct: 504 A 504
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 182/447 (40%), Gaps = 60/447 (13%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L++ K D+A+ ++ +M + G P +N LL+ + + A + F
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEM-QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV + TYN+LI L + E L + G D ++ + + G L A
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+++ +EM RG D++ + ++ GF K G + E + +RE + PNV+ +N +
Sbjct: 449 VKLVEEMETRGFSVDLVTISSLLIGFHKQGRW-DWKEKLMKHIREGNLVPNVLRWNAGVE 507
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFT-----YSSLIHGLSQMGNLD---GAQRV--- 314
+K+ + K +T S + +S +G+ D A+ V
Sbjct: 508 A---------------SLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPM 552
Query: 315 ---------YKDMI---------------GRRV-----SPDVVTCNAMLNGLCKWGKVEE 345
Y D + G+RV S DV N L+ G +
Sbjct: 553 EDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSL 612
Query: 346 SFELWEEMGQSGSRNVISY--NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
+ +L+E G ++ SY N + + G + A + + + E A D TY ++
Sbjct: 613 ACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF-ENFCAADIATYNVI 671
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
I GL K G + A VL+ +GG +D+ Y+++INAL K RLD+A + M G
Sbjct: 672 IQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGI 731
Query: 464 KLNTHVCNPLIDGFIKNSNLTLLFKSL 490
+ N +I+ K L +K L
Sbjct: 732 NPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 180 VGLRPDKFSY---GTLINAAAKRGDLNAALEVFDEMSERGV-EPDVMCYNMIIDGFFKSG 235
V +PD F T ++ +GDL+ A ++F+ + GV + YN ++ F K G
Sbjct: 585 VEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKG 644
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
F A + +++ E ++ +YNV+I+GL + GR + + +R+ K D+ Y
Sbjct: 645 YFQTARGVLDQMF-ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
++LI+ L + LD A +++ M ++PDVV+ N M+ K GK++E+++ + M
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 356 SG 357
+G
Sbjct: 764 AG 765
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP-DKFSYGTLINAAAKRGDLNAAL 206
S +V+ N + + K + A L +G+G+ ++Y +++++ K+G A
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
V D+M E D+ YN+II G K G A+ + +RL ++ + ++V YN +I
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGG-YLDIVMYNTLINA 709
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
L + R E+ ++++ MK N DV +Y+++I S+ G L A + K M+ P+
Sbjct: 710 LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Query: 327 VVT 329
VT
Sbjct: 770 HVT 772
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
++NS++++F ++ A + ++ TYNV+I+ L K + A +L +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
+ G D Y TLINA K L+ A ++FD M G+ PDV+ YN +I+ K+G
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 238 LKANEMWERLLREETVFPNVVSYNVM 263
+A + + +L + PN V+ ++
Sbjct: 752 KEAYKYLKAML-DAGCLPNHVTDTIL 776
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 182/377 (48%), Gaps = 17/377 (4%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKRE-------FEKAK 171
FN+LL+ + R D + P+V T +LI LCK R FEK +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS-ERGVEPDVMCYNMIIDG 230
G R G ++ D + TLI+ K G L A E+ M E P+ + YN +IDG
Sbjct: 357 G-KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDG 415
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ ++G A E+ R ++E+ + PNVV+ N ++ G+ R + ++ + M+K K
Sbjct: 416 YCRAGKLETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+V TY +LIH + N++ A Y+ M+ SPD A+++GLC+ + ++ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGL 407
E++ + G S ++++YN+ I GLF + E ++E+L + + DS TY LI
Sbjct: 535 EKLKEGGFSLDLLAYNMLI-GLFCDKNNTE--KVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG-CKLN 466
K+ +++E+ G D V Y ++I+A C LD+A + M N
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 467 THVCNPLIDGFIKNSNL 483
T + N LI+ F K N
Sbjct: 652 TVIYNILINAFSKLGNF 668
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 15/350 (4%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
+N L+ L + + + L+ M V +RPD + G LIN K ++ ALEVF++M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM- 355
Query: 214 ERG--------VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
RG ++ D + +N +IDG K G +A E+ R+ EE PN V+YN +I
Sbjct: 356 -RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G R G+ + E+ RMK++E K +V T ++++ G+ + L+ A + DM V
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT +++ C VE++ +E+M ++G S + Y I GL + + +A+ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
E L E ++D Y +LI C K ++L + E G D Y+++I+ K
Sbjct: 535 E-KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSLG 491
+ + ++ M + G +ID + L LFK +G
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+TL+ A S ++A+ + KM GC P + + +L++ + A +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G S ++ YN+LI + C K EK +L M G +PD +Y TLI+ K D
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+ + ++M E G++P V Y +ID + G+ +A ++++ + V PN V YN++
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I S+ G F ++L + E MK + +V TY++L L++ + ++ +M+ +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 324 SPDVVTCNAMLNGL 337
P+ +T ++ L
Sbjct: 719 EPNQITMEILMERL 732
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 142/303 (46%), Gaps = 3/303 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K EA L +M C P ++N L++ + + + E A++ +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ PNV T N ++ +C+ A M G++ + +Y TLI+A ++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ +++M E G PD Y +I G + A + E+ L+E ++++YN++I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-LKEGGFSLDLLAYNMLI 553
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ E+ M+K +K D TY++LI + + + +R+ + M +
Sbjct: 554 GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMG--QSGSRNVISYNIFIKGLFENGKVEEAMN 382
P V T A+++ C G+++E+ +L+++MG + N + YNI I + G +A++
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 383 IWE 385
+ E
Sbjct: 674 LKE 676
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 34/315 (10%)
Query: 191 TLINAAAKRGDLNAALEVFDEM--SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE-RL 247
+++ + G ++ A +V DEM E P+ + ++++ +E+W+ RL
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVL------------HEVWKGRL 237
Query: 248 LREETVF------------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
L EE + PN V I L + R + + +I + KN+ + +
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPF 297
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-- 353
++L+ L + ++ + M ++ PDVVT ++N LCK +V+E+ E++E+M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRG 357
Query: 354 -----GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
G + I +N I GL + G+++EA + + E A ++ TY LI G C
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYC 417
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+ G L A +V+ + +V ++++ +C+ L+ A M+K G K N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 469 VCNPLIDGFIKNSNL 483
LI SN+
Sbjct: 478 TYMTLIHACCSVSNV 492
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 50/282 (17%)
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+E+ + VV+ N++IR R G ++S+ ++ER+ N + V + ++ L + G +
Sbjct: 144 KEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVVDVLLRNGLV 201
Query: 309 DGAQRVYKDMIGRR---------------------------------------VSPDVVT 329
D A +V +M+ + VSP+ V
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 330 CNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
++ LCK + ++++ + M +N + L N + MN L +
Sbjct: 262 LTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR-MNDLVLKM 320
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD------VDVFAYSSMINAL 442
E + D T GILI+ LCK+ +++AL+V E+ + D D ++++I+ L
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 443 CKERRLDDAAGVVSLMD-KRGCKLNTHVCNPLIDGFIKNSNL 483
CK RL +A ++ M + C N N LIDG+ + L
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL 422
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K + + +M R G P V ++ ++++A+ + + A K F
Sbjct: 586 TLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 145 -AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ V+PN YN+LI K F +A L M +RP+ +Y L ++
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
L++ DEM E+ EP+ + ++++ S + +K
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 211/427 (49%), Gaps = 22/427 (5%)
Query: 16 LLKSEKNPHSALQLFQHA-TRHPGYTHS---SAVLQHVL---RRVASDPTLLPH------ 62
LLK +K+ +L+ F A TR+PG +HS A++ H L R+ S ++L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGG 146
Query: 63 ----APHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRS 118
A + + + C+ + V +L K +A A + F +M + +G P V S
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVES 205
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
N+ +++ + + A +F+ +SPN T N+++ C+ + +K LL+ M
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
+G R SY TLI ++G L++AL++ + M + G++P+V+ +N +I GF ++
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+A++++ ++ V PN V+YN +I G S+ G + +E M N + D+ TY++L
Sbjct: 326 EASKVFGE-MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I GL + A + K++ + P+ T +A++ G C + FEL++ M +SG
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 359 R-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
N ++N+ + N + A + ++ ++ +DS T + +GL G
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMV-RRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 418 QVLEEAE 424
++L+E E
Sbjct: 504 KLLQEME 510
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
+P V ++ L K ++F A M G P S +++ +G ++ AL
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ EM + P+ NM++ G+ +SG K E+ + + R +V SYN +I G
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGH 283
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
G S +L++ M K+ + +V T+++LIHG + L A +V+ +M V+P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWEL 386
VT N ++NG + G E +F +E+M +G R++++YN I GL + K +A +
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
L E L +S+T+ LI G C ++ ++ + G + ++ +++A C+
Sbjct: 404 LDKEN-LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 447 RLDDAAGVVSLMDKRGCKLNT----HVCNPL 473
D A+ V+ M +R L++ VCN L
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 164/356 (46%), Gaps = 23/356 (6%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRPDKFS---------------Y 189
S ++ET+ +++ L K R+F+ A+ +LR + GV L F +
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF 171
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
+L A A + F +M + G P V N + G A + R +R
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY-REMR 230
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ PN + N+++ G R G+ + +E+ + M++ + +Y++LI G + G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 310 GAQRVYKDMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
A ++ K+M+G+ + P+VVT N +++G C+ K++E+ +++ EM + N ++YN
Sbjct: 291 SALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
I G + G E A +E ++ + D TY LI GLCK KA Q ++E +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVC-NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ +S++I C + D + M + GC N N L+ F +N +
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 21/237 (8%)
Query: 276 SLEIWERMK-KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI--------------- 319
SLE + K +N H + T++ ++H L++ A+ + +D++
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 320 ---GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENG 375
R +++ K + + + +M G V S N ++ L G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+V+ A+ + + ++ + T +++ G C++G L+K +++L++ E G +Y
Sbjct: 218 RVDIALRFYREM-RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
+++I C++ L A + ++M K G + N N LI GF + L K G+
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 211/427 (49%), Gaps = 22/427 (5%)
Query: 16 LLKSEKNPHSALQLFQHA-TRHPGYTHS---SAVLQHVL---RRVASDPTLLPH------ 62
LLK +K+ +L+ F A TR+PG +HS A++ H L R+ S ++L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGG 146
Query: 63 ----APHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRS 118
A + + + C+ + V +L K +A A + F +M + +G P V S
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVES 205
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
N+ +++ + + A +F+ +SPN T N+++ C+ + +K LL+ M
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
+G R SY TLI ++G L++AL++ + M + G++P+V+ +N +I GF ++
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+A++++ ++ V PN V+YN +I G S+ G + +E M N + D+ TY++L
Sbjct: 326 EASKVFGE-MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I GL + A + K++ + P+ T +A++ G C + FEL++ M +SG
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 359 R-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
N ++N+ + N + A + ++ ++ +DS T + +GL G
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMV-RRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 418 QVLEEAE 424
++L+E E
Sbjct: 504 KLLQEME 510
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
+P V ++ L K ++F A M G P S +++ +G ++ AL
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ EM + P+ NM++ G+ +SG K E+ + + R +V SYN +I G
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGH 283
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
G S +L++ M K+ + +V T+++LIHG + L A +V+ +M V+P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWEL 386
VT N ++NG + G E +F +E+M +G R++++YN I GL + K +A +
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
L E L +S+T+ LI G C ++ ++ + G + ++ +++A C+
Sbjct: 404 LDKEN-LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 447 RLDDAAGVVSLMDKRGCKLNT----HVCNPL 473
D A+ V+ M +R L++ VCN L
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 164/356 (46%), Gaps = 23/356 (6%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRPDKFS---------------Y 189
S ++ET+ +++ L K R+F+ A+ +LR + GV L F +
Sbjct: 112 SHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVF 171
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
+L A A + F +M + G P V N + G A + R +R
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY-REMR 230
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ PN + N+++ G R G+ + +E+ + M++ + +Y++LI G + G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 310 GAQRVYKDMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
A ++ K+M+G+ + P+VVT N +++G C+ K++E+ +++ EM + N ++YN
Sbjct: 291 SALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
I G + G E A +E ++ + D TY LI GLCK KA Q ++E +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVC-NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ +S++I C + D + M + GC N N L+ F +N +
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 21/237 (8%)
Query: 276 SLEIWERMK-KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI--------------- 319
SLE + K +N H + T++ ++H L++ A+ + +D++
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 320 ---GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENG 375
R +++ K + + + +M G V S N ++ L G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+V+ A+ + + ++ + T +++ G C++G L+K +++L++ E G +Y
Sbjct: 218 RVDIALRFYREM-RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSLGK 492
+++I C++ L A + ++M K G + N N LI GF + L K G+
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 173/356 (48%), Gaps = 17/356 (4%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
SP R+ L+ S+ +P A ++F +A++ P + HS + ++ ++ ++I
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF-----NLID 104
Query: 69 AIEAAQNCNCSEDVPLT------LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
+ A S PLT L+K YA+ +P++ L+ F KM F P + N +
Sbjct: 105 DVLAKHR---SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLE-FNFTPQPKHLNRI 160
Query: 123 LNAFAVSEQW-ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
L+ + ++A + F GV PN +YN+L++ C + A L M
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ PD SY LI ++G +N A+E+ D+M +G PD + Y +++ + +A
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
++ R+ + + P++V YN MI G R R ++ ++ + M N + +Y +LI G
Sbjct: 281 KLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
L G D ++ ++MI + SP N ++ G C +GKVEE+ ++ E + ++G
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 12/334 (3%)
Query: 142 FDTAGVSPNVE----TYNVLIKVLCKKREFEKAKGLL--RWMSGVGLRPDKFSYGTLINA 195
FD A PN ++ +LI L + R F +L SG L + F+Y + A
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL-KANEMWERLLREETVF 254
AK + L F +M E P N I+D +L KA E+++ R V
Sbjct: 131 EAKLPE--KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS-RLHGVM 187
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
PN SYN++++ S + +++ +M + + DV +Y LI G + G ++GA +
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFE 373
DM+ + PD ++ +LN LC+ ++ E+++L M G +++ YN I G
Sbjct: 248 LDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR 307
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
+ +A + + +L + +S +Y LI GLC G ++ + LEE +G
Sbjct: 308 EDRAMDARKVLDDMLS-NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
+ ++ C ++++A VV ++ K G L++
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 400
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 4/365 (1%)
Query: 83 PLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
P + K A +S P A +F + R S L+ + + A
Sbjct: 51 PTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKH 110
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA-AAKRGD 201
++G E + LIKV + + EK M P +++ + RG
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
L A E+F GV P+ YN+++ F + D A +++ ++L E V P+V SY
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYK 229
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++I+G R G+ + ++E+ + M D +Y++L++ L + L A ++ M +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEA 380
+PD+V N M+ G C+ + ++ ++ ++M +G S N +SY I GL + G +E
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
E ++ + + + L+ G C G + +A V+E G + + +I
Sbjct: 350 KKYLEEMISK-GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 441 ALCKE 445
+C E
Sbjct: 409 LICNE 413
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKW-GKVEESFEL 349
++FTY LI ++ + + M+ +P N +L+ L G ++++FEL
Sbjct: 120 EIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
++ G N SYN+ ++ N + A ++ +L E + D +Y ILI G C
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGFC 236
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+ G +N A+++L++ ++G D +Y++++N+LC++ +L +A ++ M +GC +
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 469 VCNPLIDGFIK 479
N +I GF +
Sbjct: 297 HYNTMILGFCR 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV 361
+S G L A ++K V P+ + N ++ C + +++L+ +M + R+V
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE---RDV 221
Query: 362 I----SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
+ SY I I+G G+V AM + + +L + D +Y L++ LC+ L +A
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK-GFVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
++L + +G + D+ Y++MI C+E R DA V+ M GC N+ LI G
Sbjct: 281 KLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 5/206 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TLL + +++ EA L +M ++ GC P + +N+++ F ++ A K +
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G SPN +Y LI LC + F++ K L M G P L+ G +
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +V + + + G + M+I + K E ++EE ++
Sbjct: 384 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT----RIVD 439
Query: 265 RGLSRCGRFSESLEIWERMKKNERKH 290
G+ S L++ + + R+H
Sbjct: 440 VGIGLGSYLSSKLQMKRKNARERRRH 465
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 183/377 (48%), Gaps = 17/377 (4%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
FN+LL+ + R D + P+V T +LI LCK R ++A + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 179 GVG------LRPDKFSYGTLINAAAKRGDLNAALEVFDEM--SERGVEPDVMCYNMIIDG 230
G ++ D + TLI+ K G L A E+ M ER V P+ + YN +IDG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDG 415
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ ++G A E+ R ++E+ + PNVV+ N ++ G+ R + ++ + M+K K
Sbjct: 416 YCRAGKLETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+V TY +LIH + N++ A Y+ M+ SPD A+++GLC+ + ++ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGL 407
E++ + G S ++++YN+ I GLF + A ++E+L + + DS TY LI
Sbjct: 535 EKLKEGGFSLDLLAYNMLI-GLFCDKN--NAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG-CKLN 466
K+ +++E+ G D V Y ++I+A C LD+A + M N
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 467 THVCNPLIDGFIKNSNL 483
T + N LI+ F K N
Sbjct: 652 TVIYNILINAFSKLGNF 668
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 15/350 (4%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
+N L+ L + + + L+ M V +RPD + G LIN K ++ ALEVF++M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM- 355
Query: 214 ERG--------VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
RG ++ D + +N +IDG K G +A E+ R+ EE PN V+YN +I
Sbjct: 356 -RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G R G+ + E+ RMK++E K +V T ++++ G+ + L+ A + DM V
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT +++ C VE++ +E+M ++G S + Y I GL + + +A+ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
E L E ++D Y +LI C K ++L + E G D Y+++I+ K
Sbjct: 535 E-KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSLG 491
+ + ++ M + G +ID + L LFK +G
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+TL+ A S ++A+ + KM GC P + + +L++ + A +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G S ++ YN+LI + C K EK +L M G +PD +Y TLI+ K D
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+ + ++M E G++P V Y +ID + G+ +A ++++ + V PN V YN++
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I S+ G F ++L + E MK + +V TY++L L++ + ++ +M+ +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 324 SPDVVTCNAMLNGL 337
P+ +T ++ L
Sbjct: 719 EPNQITMEILMERL 732
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 42/391 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K EA L +M C P ++N L++ + + + E A++ +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ PNV T N ++ +C+ A M G++ + +Y TLI+A ++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGF---------------FKSGDFL----------- 238
A+ +++M E G PD Y +I G K G F
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 239 ------KANEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
A +++E L + +E P+ ++YN +I + F + E+M+++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDM-IGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
V TY ++I +G LD A +++KDM + +V+P+ V N ++N K G ++ L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
EEM R NV +YN K L E + E + + + ++ E + + T IL+ L
Sbjct: 675 KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV-EQSCEPNQITMEILMERLS 733
Query: 409 KNGYLNKALQVLE-----EAEHRGGDVDVFA 434
+ L K + ++ + DVF+
Sbjct: 734 GSDELVKLRKFMQGYSVASPTEKASPFDVFS 764
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 34/315 (10%)
Query: 191 TLINAAAKRGDLNAALEVFDEM--SERGVEPDVMCYNMIIDGFFKSGDFLKANEMW-ERL 247
+++ + G ++ A +V DEM E P+ + ++++ +E+W ERL
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVL------------HEVWKERL 237
Query: 248 LREETVF------------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
L EE + PN V I L + R + + +I + KN+ + +
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPF 297
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-- 353
++L+ L + ++ + M ++ PDVVT ++N LCK +V+E+ E++E+M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRG 357
Query: 354 -----GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
G + I +N I GL + G+++EA + + E ++ TY LI G C
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+ G L A +V+ + +V ++++ +C+ L+ A M+K G K N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 469 VCNPLIDGFIKNSNL 483
LI SN+
Sbjct: 478 TYMTLIHACCSVSNV 492
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 50/282 (17%)
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+E+ + +V+ ++IR R G ++S+ ++ER+ N + V + ++ L + G +
Sbjct: 144 KEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVVDVLLRNGLV 201
Query: 309 DGAQRVYKDMIGRR---------------------------------------VSPDVVT 329
D A +V +M+ + VSP+ V
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 330 CNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
++ LCK + ++++ + M +N + L N + MN L +
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR-MNDLVLKM 320
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD------VDVFAYSSMINAL 442
E + D T GILI+ LCK+ +++AL+V E+ + D D ++++I+ L
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 443 CKERRLDDAAGVVSLMD-KRGCKLNTHVCNPLIDGFIKNSNL 483
CK RL +A ++ M + C N N LIDG+ + L
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL 422
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 183/377 (48%), Gaps = 17/377 (4%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
FN+LL+ + R D + P+V T +LI LCK R ++A + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 179 GVG------LRPDKFSYGTLINAAAKRGDLNAALEVFDEM--SERGVEPDVMCYNMIIDG 230
G ++ D + TLI+ K G L A E+ M ER V P+ + YN +IDG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDG 415
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ ++G A E+ R ++E+ + PNVV+ N ++ G+ R + ++ + M+K K
Sbjct: 416 YCRAGKLETAKEVVSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+V TY +LIH + N++ A Y+ M+ SPD A+++GLC+ + ++ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 351 EEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGL 407
E++ + G S ++++YN+ I GLF + A ++E+L + + DS TY LI
Sbjct: 535 EKLKEGGFSLDLLAYNMLI-GLFCDKN--NAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG-CKLN 466
K+ +++E+ G D V Y ++I+A C LD+A + M N
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 467 THVCNPLIDGFIKNSNL 483
T + N LI+ F K N
Sbjct: 652 TVIYNILINAFSKLGNF 668
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 15/350 (4%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
+N L+ L + + + L+ M V +RPD + G LIN K ++ ALEVF++M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM- 355
Query: 214 ERG--------VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
RG ++ D + +N +IDG K G +A E+ R+ EE PN V+YN +I
Sbjct: 356 -RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G R G+ + E+ RMK++E K +V T ++++ G+ + L+ A + DM V
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+VVT +++ C VE++ +E+M ++G S + Y I GL + + +A+ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
E L E ++D Y +LI C K ++L + E G D Y+++I+ K
Sbjct: 535 E-KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSLG 491
+ + ++ M + G +ID + L LFK +G
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+TL+ A S ++A+ + KM GC P + + +L++ + A +
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G S ++ YN+LI + C K EK +L M G +PD +Y TLI+ K D
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+ + ++M E G++P V Y +ID + G+ +A ++++ + V PN V YN++
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
I S+ G F ++L + E MK + +V TY++L L++ + ++ +M+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 142/303 (46%), Gaps = 3/303 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K EA L +M C P ++N L++ + + + E A++ +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ PNV T N ++ +C+ A M G++ + +Y TLI+A ++
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ +++M E G PD Y +I G + A + E+ L+E ++++YN++I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-LKEGGFSLDLLAYNMLI 553
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ E+ M+K +K D TY++LI + + + +R+ + M +
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMG--QSGSRNVISYNIFIKGLFENGKVEEAMN 382
P V T A+++ C G+++E+ +L+++MG + N + YNI I + G +A++
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 383 IWE 385
+ E
Sbjct: 674 LKE 676
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 3/256 (1%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A+ F M++ G + V ++ +L++A E+A ++ AG SP+ + Y LI
Sbjct: 460 AVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
LC+ R A ++ + G D +Y LI + + E+ +M + G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD + YN +I F K DF M E+ +RE+ + P V +Y +I G E+L+
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQ-MREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 279 IWERMKKNERKH-DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
+++ M + + + + Y+ LI+ S++GN A + ++M + V P+V T NA+ L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 338 CKWGKVEESFELWEEM 353
+ + E +L +EM
Sbjct: 698 NEKTQGETLLKLMDEM 713
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 34/316 (10%)
Query: 190 GTLINAAAKRGDLNAALEVFDEM--SERGVEPDVMCYNMIIDGFFKSGDFLKANEMW-ER 246
+++ + G ++ A +V DEM E P+ + ++++ +E+W ER
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVL------------HEVWKER 236
Query: 247 LLREETVF------------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
LL EE + PN V I L + R + + +I + KN+ +
Sbjct: 237 LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP 296
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM- 353
+++L+ L + ++ + M ++ PDVVT ++N LCK +V+E+ E++E+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 354 ------GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
G + I +N I GL + G+++EA + + E ++ TY LI G
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
C+ G L A +V+ + +V ++++ +C+ L+ A M+K G K N
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 468 HVCNPLIDGFIKNSNL 483
LI SN+
Sbjct: 477 VTYMTLIHACCSVSNV 492
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 50/282 (17%)
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+E+ + +V+ ++IR R G ++S+ ++ER+ N + V + ++ L + G +
Sbjct: 144 KEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVVVDVLLRNGLV 201
Query: 309 DGAQRVYKDMIGRR---------------------------------------VSPDVVT 329
D A +V +M+ + VSP+ V
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 330 CNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
++ LCK + ++++ + M +N + L N + MN L +
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR-MNDLVLKM 320
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD------VDVFAYSSMINAL 442
E + D T GILI+ LCK+ +++AL+V E+ + D D ++++I+ L
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 443 CKERRLDDAAGVVSLMD-KRGCKLNTHVCNPLIDGFIKNSNL 483
CK RL +A ++ M + C N N LIDG+ + L
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL 422
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 5/340 (1%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
VSP V + L+K L + + KA + G +P +Y ++I + G
Sbjct: 160 VSPAV--LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 207 EVFDEMSERG-VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
EV+ EM G PD + Y+ +I + K G A +++ + ++ + P Y ++
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLG 276
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G+ ++L+++E MK+ V+TY+ LI GL + G +D A YKDM+ ++P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIW 384
DVV N ++N L K G+VEE ++ EMG + V+SYN IK LFE+ ++ W
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ +++ TY ILI G CK + KAL +LEE + +G AY S+INAL K
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
+R + A + + + +++ V +I F K L+
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 222/474 (46%), Gaps = 8/474 (1%)
Query: 11 HRLL-NLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGA 69
HRL+ ++L+ + + +Q F+ A + + H + ++R + L I
Sbjct: 93 HRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIR-CLEEARLYGEMYRTIQE 151
Query: 70 IEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS 129
+ + S V L+KA + M +AL++F + + C+P ++NS++
Sbjct: 152 VVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQA-KGRKCKPTSSTYNSVILMLMQE 210
Query: 130 EQWERAEKFFAYFDTAG-VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
Q E+ + + G P+ TY+ LI K + A L M ++P +
Sbjct: 211 GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
Y TL+ K G + AL++F+EM G P V Y +I G K+G +A ++ +L
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL-SQMGN 307
R+ + P+VV N ++ L + GR E ++ M V +Y+++I L +
Sbjct: 331 RD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNI 366
+ + M VSP T + +++G CK +VE++ L EEM + G +Y
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I L + + E A +++ L E V S Y ++I K G L++A+ + E +++
Sbjct: 450 LINALGKAKRYEAANELFKEL-KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
G DV+AY+++++ + K +++A ++ M++ GC+ + + N +++GF +
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFART 562
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 185/408 (45%), Gaps = 10/408 (2%)
Query: 76 CNCSEDVPLT-----LLKAYAKRSMPDEALNLFRKMDRVFGC-RPGVRSFNSLLNAFAVS 129
CN + P T L+ +Y K D A+ LF +M C +P + + +LL +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD--NCMQPTEKIYTTLLGIYFKV 281
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+ E+A F AG SP V TY LIK L K ++A G + M GL PD
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
L+N K G + VF EM P V+ YN +I F+S + W ++
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
++V P+ +Y+++I G + R ++L + E M + Y SLI+ L + +
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFI 368
A ++K++ + M+ K GK+ E+ +L+ EM GS +V +YN +
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G+ + G + EA ++ + E D ++ I+++G + G +A+++ E +H G
Sbjct: 522 SGMVKAGMINEANSLLR-KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
D Y++++ ++AA ++ M +G + + + ++D
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 180/376 (47%), Gaps = 8/376 (2%)
Query: 71 EAAQNC-NCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS 129
E NC +E + TLL Y K ++AL+LF +M R GC P V ++ L+ +
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA-GCSPTVYTYTELIKGLGKA 316
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+ + A F+ G++P+V N L+ +L K E+ + M P SY
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376
Query: 190 GTLINAA-AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
T+I A + ++ FD+M V P Y+++IDG+ K+ KA + E +
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM- 435
Query: 249 REETVFPNV-VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+E FP +Y +I L + R+ + E+++ +K+N Y+ +I + G
Sbjct: 436 -DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNI 366
L A ++ +M + PDV NA+++G+ K G + E+ L +M ++G R ++ S+NI
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
+ G G A+ ++E + + + D TY L+ G +A +++ E + +
Sbjct: 555 ILNGFARTGVPRRAIEMFETI-KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 427 GGDVDVFAYSSMINAL 442
G + D YSS+++A+
Sbjct: 614 GFEYDAITYSSILDAV 629
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 5/237 (2%)
Query: 73 AQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
A + + SE L+ Y K + ++AL L +MD G P ++ SL+NA ++++
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK-GFPPCPAAYCSLINALGKAKRY 460
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E A + F + + Y V+IK K + +A L M G PD ++Y L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
++ K G +N A + +M E G D+ +N+I++GF ++G +A EM+E ++
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE-TIKHSG 579
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ P+ V+YN ++ + G F E+ + MK ++D TYSS+ L +GN+D
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSI---LDAVGNVD 633
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P P + L+N L K +A +LF+ + G SS V +++ L
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNV-SSRVYAVMIKHFGKCGKL----S 496
Query: 65 HIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
+ +N DV L+ K M +EA +L RKM+ GCR + S N +
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN-GCRADINSHNII 555
Query: 123 LNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
LN FA + RA + F +G+ P+ TYN L+ FE+A ++R M G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 183 RPDKFSYGTLINAAA 197
D +Y ++++A
Sbjct: 616 EYDAITYSSILDAVG 630
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 190/380 (50%), Gaps = 8/380 (2%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N ++ A ++A F P+ ETY+ LI + ++ A L+ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
+ P + +Y LINA G+ ALEV +M++ GV PD++ +N+++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM--KKNERKHDVFTYS 296
KA +E L++ V P+ ++N++I LS+ G+ S++L+++ M K+ E + DV T++
Sbjct: 134 KALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
S++H S G ++ + V++ M+ + P++V+ NA++ G + + ++ Q+
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 357 G-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
G +V+SY + + + +A ++ L++ + + TY LI NG+L +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
A+++ + E G +V + +++ A + ++ + V+S RG LNT N I
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 476 GFIKNSNL---TLLFKSLGK 492
+I + L L++S+ K
Sbjct: 372 SYINAAELEKAIALYQSMRK 391
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 195/431 (45%), Gaps = 43/431 (9%)
Query: 74 QNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q +C D L+ A+ + A+NL M R P ++N+L+NA S
Sbjct: 38 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA-AIAPSRSTYNNLINACGSSGN 96
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
W A + GV P++ T+N+++ R++ KA M G +RPD ++
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVE--PDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
+I +K G + AL++F+ M E+ E PDV+ + I+ + G+ ++E ++
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV- 215
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
E + PN+VSYN ++ + G +L + +K+N DV +Y+ L++ +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS----- 363
A+ V+ M R P+VVT NA+++ G + E+ E++ +M Q G + NV+S
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 364 ------------------------------YNIFIKGLFENGKVEEAMNIWELLLGETAL 393
YN I ++E+A+ +++ + +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
A DS T+ ILI G C+ +A+ L+E E + YSS++ A K+ ++ +A
Sbjct: 396 A-DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 454 VVSLMDKRGCK 464
+ + M GC+
Sbjct: 455 IFNQMKMAGCE 465
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 153/341 (44%), Gaps = 10/341 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ AY EA+ +FR+M++ G +P V S +LL A + S++ + + +
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G++ N YN I E EKA L + M ++ D ++ LI+ + +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ EM + + Y+ ++ + K G +A ++ + ++ P+V++Y M+
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ-MKMAGCEPDVIAYTSML 475
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ ++ ++ E++ M+ N + D S+L+ ++ G V D++ +
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEI 534
Query: 325 PDV----VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
P + N L +W + + ++ + S S + + + + G ++GKVE
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG--KSGKVEAM 592
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
M ++ ++ + + ++ TY IL+ L G K ++VLE
Sbjct: 593 MKLFYKIIA-SGVGINLKTYAILLEHLLAVGNWRKYIEVLE 632
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 14/372 (3%)
Query: 110 FGCRPGVRSFNSLLNAFAVSE-QWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
FG P R +NSL++ F V+ ++ ++ GVSP+V NVLI CK
Sbjct: 87 FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
A LLR + D +Y T+I+ + G + A + EM + G+ PD + YN +I
Sbjct: 147 FAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
DGF K G+F++A + L +E N++++ +++ E+ + M +
Sbjct: 204 DGFCKVGNFVRA-----KALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGF 255
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
DV T+SS+I+ L + G + + ++M V P+ VT +++ L K +
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 349 LWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
L+ +M G +++ Y + + GLF+ G + EA +++LL + + + TY L+ GL
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP-NVVTYTALVDGL 374
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
CK G L+ A ++ + + +V YSSMIN K+ L++A ++ M+ + N
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 468 HVCNPLIDGFIK 479
+IDG K
Sbjct: 435 FTYGTVIDGLFK 446
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 32/389 (8%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF----- 139
T++ + + DEA +M ++ G P S+N+L++ F + RA+
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKM-GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 140 ---------------------AYFDT--AGVSPNVETYNVLIKVLCKKREFEKAKGLLRW 176
AY D +G P+V T++ +I LCK + + LLR
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
M + + P+ +Y TL+++ K AL ++ +M RG+ D++ Y +++DG FK+GD
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
+A + ++ LL + V PNVV+Y ++ GL + G S + I +M + +V TYS
Sbjct: 345 LREAEKTFKMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
S+I+G + G L+ A + + M + V P+ T +++GL K GK E + EL +EM
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 357 G-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
G N + + L G+++E + + ++ + + +D Y LI K G
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK-GVTLDQINYTSLIDVFFKGGDEEA 522
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCK 444
AL EE + RG DV +Y+ +I+ + K
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 199/436 (45%), Gaps = 42/436 (9%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K ++ AL L+ +M V G + + L++ + AEK F
Sbjct: 299 TLVDSLFKANIYRHALALYSQM-VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
PNV TY L+ LCK + A+ ++ M + P+ +Y ++IN K+G L
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ + +M ++ V P+ Y +IDG FK+G A E+ + +R V N + ++
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL-SKEMRLIGVEENNYILDALV 476
Query: 265 RGLSRCGRFSES----------------------LEIWER-------------MKKNERK 289
L R GR E ++++ + M++
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
DV +Y+ LI G+ + G + GA YK M + + PD+ T N M+N K G E +L
Sbjct: 537 WDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW-ELLLGETALAVDSTTYGILIHGL 407
W++M G + +++S NI + L ENGK+EEA++I +++L E + + TTY I +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME--IHPNLTTYRIFLDTS 653
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
K+ + + E G + Y+++I LCK AA V+ M+ RG +T
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 468 HVCNPLIDGFIKNSNL 483
N L+ G+ S++
Sbjct: 714 VTFNSLMHGYFVGSHV 729
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 11/291 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ + K+ + L L+ KM + G +P + S N ++ + + E A
Sbjct: 579 MMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 146 GVSPNVETYNVLIKVLCKKRE----FEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+ PN+ TY + + K + F+ + LL + G++ + Y TLI K G
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY----GIKLSRQVYNTLIATLCKLGM 693
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
A V +M RG PD + +N ++ G+F KA + ++ E + PNV +YN
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVATYN 752
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+IRGLS G E + MK + D FTY++LI G +++GN+ G+ +Y +MI
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
+ P T N +++ GK+ ++ EL +EMG+ G S N +Y I GL
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 191/406 (47%), Gaps = 17/406 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ Y K+ M +EA++L RKM+ P ++ ++++ + + E A +
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GV N + L+ L + ++ KGL++ M G+ D+ +Y +LI+ K GD A
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE-RLLREETVFPNVVSYNVM 263
AL +EM ERG+ DV+ YN++I G K G K W + +RE+ + P++ ++N+M
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFG---KVGADWAYKGMREKGIEPDIATFNIM 579
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ + G L++W++MK K + + + ++ L + G ++ A + M+ +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG---SRNVISYNIFIKGLFENGKVEEA 380
P++ T L+ K + + F+ E + G SR V YN I L + G ++A
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV--YNTLIATLCKLGMTKKA 697
Query: 381 MNIWELLLGET---ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
+++G+ D+ T+ L+HG ++ KAL G +V Y++
Sbjct: 698 ----AMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+I L + + +S M RG + + N LI G K N+
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 8/246 (3%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA---GVSPNVET 153
+EA+++ +M + P + ++ L+ S + +RA+ F +T G+ + +
Sbjct: 625 EEAIHILNQM-MLMEIHPNLTTYRIFLDT---SSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
YN LI LCK +KA ++ M G PD ++ +L++ + AL + M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
E G+ P+V YN II G +G +K + W ++ + P+ +YN +I G ++ G
Sbjct: 741 EAGISPNVATYNTIIRGLSDAG-LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
S+ I+ M + TY+ LI + +G + A+ + K+M R VSP+ T M
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 334 LNGLCK 339
++GLCK
Sbjct: 860 ISGLCK 865
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
S V TL+ K M +A + M+ G P +FNSL++ + V +A
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDME-ARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
++ AG+SPNV TYN +I+ L ++ L M G+RPD F+Y LI+ AK
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
G++ ++ ++ EM G+ P YN++I F G L+A E+ + + + V PN
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE-MGKRGVSPNTS 854
Query: 259 SYNVMIRGLSR 269
+Y MI GL +
Sbjct: 855 TYCTMISGLCK 865
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
L A M GV PD +N +I F +G + + V P+V + N
Sbjct: 74 LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 133
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
V+I + GR S ++ + ++ D TY+++I GL + G D A + +M+
Sbjct: 134 VLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAM 381
+ PD V+ N +++G CK G + L +E+ + N+I++ I + + +EEA
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE---LNLITHTILLSSYYNLHAIEEAY 247
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++++ + D T+ +I+ LCK G + + +L E E + Y++++++
Sbjct: 248 R--DMVM--SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
L K A + S M RG ++ V L+DG K +L
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 345
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 181/399 (45%), Gaps = 38/399 (9%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P S ++L+ A +Q ++A +G P+ TYN++I LCKK A L
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL--------------------------- 206
L MS G PD +Y T+I G+ A+
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 207 --------EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
EV ++M+ G PD++ YN +++ + G+ + + + +L N V
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL-NTV 315
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+YN ++ L + E EI M + V TY+ LI+GL + L A + M
Sbjct: 316 TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 375
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKV 377
+ ++ PD+VT N +L + K G V+++ EL + + +I+YN I GL + G +
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
++A+ ++ +L + + D T LI+G C+ + +A QVL+E +RG + Y
Sbjct: 436 KKALELYHQML-DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRL 494
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+I LCK++ ++ A VV +M GCK + + ++ G
Sbjct: 495 VIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 176/356 (49%), Gaps = 10/356 (2%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
K+ AL L M + G P V ++N+++ E+A +F+ G P
Sbjct: 185 CKKGHIRTALVLLEDMS-LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPF 243
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
+ TY VL++++C+ +A +L M+ G PD +Y +L+N +RG+L V
Sbjct: 244 MITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ 303
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
+ G+E + + YN ++ S ++ E ++ + + P V++YN++I GL +
Sbjct: 304 HILSHGLELNTVTYNTLLHSLC-SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA 362
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
S +++ + +M + + D+ TY++++ +S+ G +D A + + P ++T
Sbjct: 363 RLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
N++++GL K G ++++ EL+ +M +G + I+ I G VEEA + L
Sbjct: 423 NSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV----LK 478
Query: 390 ETA---LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
ET+ + +TY ++I GLCK + A++V+E G D Y++++ +
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 9/332 (2%)
Query: 152 ETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
ET N ++ LC + A L+ M+ P S L+ A+ L+ A+ +
Sbjct: 105 ETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
M G PD + YNMII K G A + E + + P+V++YN +IR + G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSP-PDVITYNTVIRCMFDYG 223
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+++ W+ +N + TY+ L+ + + A V +DM PD+VT N
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN---GKVEEAMNIWELL 387
+++N C+ G +EE + + + G N ++YN + L + +VEE +NI
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI---- 339
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ +T+ TY ILI+GLCK L++A+ + + D+ Y++++ A+ KE
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+DDA ++ L+ C N +IDG K
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 109 VFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
V GC P + ++NSL+N E + + G+ N TYN L+ LC ++
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD 331
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
+ + +L M P +Y LIN K L+ A++ F +M E+ PD++ YN ++
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
K G A E+ LL+ P +++YN +I GL++ G ++LE++ +M
Sbjct: 392 GAMSKEGMVDDAIELL-GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
D T SLI+G + ++ A +V K+ R T ++ GLCK ++E + E
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIE 510
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAM 381
+ E M G + + Y +KG+ E G EA+
Sbjct: 511 VVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
D+ + +++ G L A ++ + M+ P + ++ G + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
++ V P+ ++YN++I L + G +L + E M + DV TY+++I +
Sbjct: 163 RVMVMSGGV-PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
GN + A R +KD + P ++T ++ +C++ + E+ E+M G ++++
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
YN + G +EE ++ + +L L +++ TY L+H LC + Y ++ ++L
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSH-GLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
V Y+ +IN LCK R L A M ++ C
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG------------ 336
++D T + ++H L G L A ++ + M P +C+ ++ G
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 337 -----------------------LCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLF 372
LCK G + + L E+M SGS +VI+YN I+ +F
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
+ G E+A+ W+ L + TY +L+ +C+ +A++VLE+ G D+
Sbjct: 221 DYGNAEQAIRFWKDQL-QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
Y+S++N C+ L++ A V+ + G +LNT N L+
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 181/384 (47%), Gaps = 3/384 (0%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A N+F +M V G P S+ ++ + + A+++ G P+ T +++
Sbjct: 201 AENVFDEMS-VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
LC+ +A R M +G +P+ ++ +LI+ K+G + A E+ +EM G +
Sbjct: 260 TALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 319
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
P+V + +IDG K G KA ++ +L+R +T PNV +Y MI G + + + +
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM 379
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ RMK+ +V TY++LI+G + G+ A + M P++ T NA ++ LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 339 KWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K + E++EL + G + ++Y I I+ + + +A+ + + +T D
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF-CRMNKTGFEADM 498
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
ILI C+ + ++ ++ + G Y+SMI+ CKE +D A
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 458 MDKRGCKLNTHVCNPLIDGFIKNS 481
M + GC ++ LI G K S
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKS 582
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 198/417 (47%), Gaps = 15/417 (3%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
+ +V +L+ +++ +EA+ + M G P + N +L E AE
Sbjct: 146 AHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELGLIEYAENV 204
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV---GLRPDKFSYGTLINA 195
F GV P+ +Y +++ + + ++A RW++G+ G PD + ++ A
Sbjct: 205 FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD---RWLTGMIQRGFIPDNATCTLILTA 261
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+ G +N A+ F +M + G +P+++ + +IDG K G +A EM E ++R P
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK-P 320
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRV 314
NV ++ +I GL + G ++ ++ ++ +++ K +V TY+S+I G + L+ A+ +
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFE 373
+ M + + P+V T ++NG CK G ++EL MG G N+ +YN I L +
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 374 NGKVEEAMNIWELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ EA +ELL L D TY ILI CK +N+AL G + D
Sbjct: 441 KSRAPEA---YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+ + +I A C+++++ ++ + L+ G +I + K ++ L K
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 37/325 (11%)
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
+A G++ M GL P + ++ A + G + A VFDEMS RGV PD
Sbjct: 165 EAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDS------- 217
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
SY +M+ G R G+ E+ M +
Sbjct: 218 -----------------------------SSYKLMVIGCFRDGKIQEADRWLTGMIQRGF 248
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
D T + ++ L + G ++ A ++ MI P+++ ++++GLCK G ++++FE
Sbjct: 249 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
+ EEM ++G + NV ++ I GL + G E+A ++ L+ + TY +I G
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
CK LN+A + + +G +V Y+++IN CK A +++LM G N
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 468 HVCNPLIDGFIKNSNLTLLFKSLGK 492
+ N ID K S ++ L K
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGC---RPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+ + K+S EA L +++ F C GV ++ L+ +A FF +
Sbjct: 435 IDSLCKKSRAPEAYEL---LNKAFSCGLEADGV-TYTILIQEQCKQNDINQALAFFCRMN 490
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G ++ N+LI C++++ ++++ L + + +GL P K +Y ++I+ K GD++
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 550
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
AL+ F M G PD Y +I G K +A +++E ++ P V +
Sbjct: 551 LALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL- 609
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
C R ++S ++ ++K + T +L+ L + A ++ ++ +
Sbjct: 610 --AYEYCKR-NDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS 666
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
S D VT A + GK +L E + +
Sbjct: 667 SADRVTLAAFTTACSESGKNNLVTDLTERISR 698
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 171/370 (46%), Gaps = 11/370 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P ++ L+N A + + G N TYN L++ LC ++
Sbjct: 136 GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQS 195
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + GL P+ F+Y L+ AA K + A+++ DE+ +G EP+++ YN+++ G
Sbjct: 196 LQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTG 255
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
F K G A ++ R L + NVVSYN+++R L GR+ E+ + M +R
Sbjct: 256 FCKEGRTDDAMALF-RELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMI--GRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
V TY+ LI+ L+ G + A +V K+M + + N ++ LCK GKV+ +
Sbjct: 315 SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVK 374
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
+EM + N +YN N KV+EA I + L + Y +I L
Sbjct: 375 CLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD-FYKSVITSL 433
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
C+ G A Q+L E G D D YS++I LC E A V+S+M++ +
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE------S 487
Query: 468 HVCNPLIDGF 477
C P +D F
Sbjct: 488 ENCKPTVDNF 497
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 155/298 (52%), Gaps = 9/298 (3%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G +P+ L+ K L A+ V + M G+ PD Y +++ K G+ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 241 NEMWERLLREETVFP-NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
++ E++ E+ +P N V+YN ++RGL G ++SL+ ER+ + + FTYS L+
Sbjct: 161 MQLVEKM--EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
+ D A ++ ++I + P++V+ N +L G CK G+ +++ L+ E+ G +
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 360 -NVISYNIFIKGLFENGKVEEAMNIW-ELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
NV+SYNI ++ L +G+ EEA ++ E+ G+ A +V TY ILI+ L +G +AL
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV--VTYNILINSLAFHGRTEQAL 336
Query: 418 QVLEEAEHRGGDVDVFA--YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
QVL+E V A Y+ +I LCKE ++D + M R CK N N +
Sbjct: 337 QVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 171/324 (52%), Gaps = 6/324 (1%)
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
T G PNV L+ LCK +KA ++ M G+ PD +Y L+N KRG++
Sbjct: 99 TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A+++ ++M + G + + YN ++ G G ++ + ERL+ ++ + PN +Y+ +
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM-QKGLAPNAFTYSFL 217
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ + E++++ + + + ++ +Y+ L+ G + G D A +++++ +
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMN 382
+VV+ N +L LC G+ EE+ L EM G + +V++YNI I L +G+ E+A+
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 383 IW-ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
+ E+ G V +T+Y +I LCK G ++ ++ L+E +R + Y++ I +
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGS 396
Query: 442 LCKER-RLDDAAGVV-SLMDKRGC 463
LC+ ++ +A ++ SL +K+ C
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKC 420
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 159/348 (45%), Gaps = 13/348 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL+A K DEA+ L ++ V G P + S+N LL F + + A F
Sbjct: 217 LLEAAYKERGTDEAVKLLDEI-IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G NV +YN+L++ LC +E+A LL M G P +Y LIN+ A G A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 206 LEVFDEMSERGVEPDVMC--YNMIIDGFFKSGDF-LKANEMWERLLREETVFPNVVSYNV 262
L+V EMS+ + V YN +I K G L + E + R PN +YN
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR--CKPNEGTYNA 393
Query: 263 MIRGLSRCGRFSESLEIWERMKKNER--KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
+ + E+ I + + ++ HD Y S+I L + GN A ++ +M
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS--RNVISYNIFIKGLFENGKVE 378
PD T +A++ GLC G + E+ M +S + V ++N I GL + + +
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
AM ++E+++ E + TTY IL+ G+ L A +VL+E R
Sbjct: 512 LAMEVFEMMV-EKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNA 332
S+S E + K +V + L++ L + L A RV + M+ + PD
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 333 MLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
++N LCK G V + +L E+M G N ++YN ++GL G + +++ E L+ +
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM-QK 205
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
LA ++ TY L+ K ++A+++L+E +GG+ ++ +Y+ ++ CKE R DDA
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 452 AGVVSLMDKRGCKLNTHVCNPLI 474
+ + +G K N N L+
Sbjct: 266 MALFRELPAKGFKANVVSYNILL 288
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 73/310 (23%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL + K D+A+ LFR++ G + V S+N LL +WE A A D
Sbjct: 252 LLTGFCKEGRTDDAMALFRELP-AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG 310
Query: 146 GVSPNV-------------------------------------ETYNVLIKVLCKKREFE 168
+P+V +YN +I LCK+ + +
Sbjct: 311 DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 169 KAKGLLRWMSGVGLRPDKFSYG-----------------------------------TLI 193
L M +P++ +Y ++I
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVI 430
Query: 194 NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
+ ++G+ AA ++ EM+ G +PD Y+ +I G G F A E+ + E
Sbjct: 431 TSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC 490
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
P V ++N MI GL + R ++E++E M + +R + TY+ L+ G++ L+ A+
Sbjct: 491 KPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKE 550
Query: 314 VYKDMIGRRV 323
V ++ R+V
Sbjct: 551 VLDELRLRKV 560
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNI 383
P+V +L LCK +++++ + E M SG + +Y + L + G V AM +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
E + + ++ TY L+ GLC G LN++LQ +E +G + F YS ++ A
Sbjct: 164 VEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
KER D+A ++ + +G + N N L+ GF K
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 192/391 (49%), Gaps = 13/391 (3%)
Query: 63 APHIIGAIEAAQNCNCSEDVPLTL------LKAYAKRSMPDEALNLFRK-MDRVFGCRPG 115
+P++ A + + +PL L L++Y ++ ++ + LF+ + RPG
Sbjct: 62 SPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPG 121
Query: 116 VRSFNSLLN--AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
+F LL+ A + G+ P+ T ++ ++ LC+ ++AK L
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER-GVEPDVMCYNMIIDGFF 232
++ ++ PD ++Y L+ K DL+ E DEM + V+PD++ + ++ID
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 233 KSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
S + +A + +L P+ YN +++G + SE++ ++++MK+ + D
Sbjct: 242 NSKNLREAMYLVSKL-GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
TY++LI GLS+ G ++ A+ K M+ PD T +++NG+C+ G+ + L EE
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
Query: 353 MGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNG 411
M G + N +YN + GL + +++ M ++E++ + + ++S Y L+ L K+G
Sbjct: 361 MEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM-KSSGVKLESNGYATLVRSLVKSG 419
Query: 412 YLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ +A +V + A D AYS++ L
Sbjct: 420 KVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 155/340 (45%), Gaps = 6/340 (1%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYF--DTAGVSPNVETYNVLIKVLCKKRE--FEKAKGLLR 175
NS+L ++ K F + P T+ +L+ C+ + +L
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLN 148
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
M GL PD+ + + + + G ++ A ++ E++E+ PD YN ++ K
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
D E + + + V P++VS+ ++I + E++ + ++ K D F Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
++++ G + A VYK M V PD +T N ++ GL K G+VEE+ + M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 356 SG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+G + +Y + G+ G+ A+++ E + A + TY L+HGLCK ++
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR-GCAPNDCTYNTLLHGLCKARLMD 387
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
K +++ E + G ++ Y++++ +L K ++ +A V
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 173/376 (46%), Gaps = 29/376 (7%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFF-----AYFDTAGVSPNVETYNVLIKVLCKKREFE 168
P + SL N+ A + + KF +Y A V+ V+ + ++K
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK--------- 113
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD--LNAALEVFDEMSERGVEPDVMCYNM 226
S RP + ++ L++ A + D ++ V + M G+EPD + ++
Sbjct: 114 ---------SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDI 164
Query: 227 IIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+ ++G +A ++ + L + + P+ +YN +++ L +C E + M+ +
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSP-PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
Query: 287 -ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+ K D+ +++ LI + NL A + + PD N ++ G C K E
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 346 SFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ ++++M + G + I+YN I GL + G+VEEA + ++ + D+ TY L+
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV-DAGYEPDTATYTSLM 342
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
+G+C+ G AL +LEE E RG + Y+++++ LCK R +D + +M G K
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 465 LNTHVCNPLIDGFIKN 480
L ++ L+ +K+
Sbjct: 403 LESNGYATLVRSLVKS 418
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 194/403 (48%), Gaps = 14/403 (3%)
Query: 65 HII-GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
H++ G I + Q C S DV +L++A + A + + R G V + N+ +
Sbjct: 132 HVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQT-RAEGFCVSVHALNNFM 190
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
+ +R K + D+ G NV T+N++I CK+ + +A + M G+
Sbjct: 191 GCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVW 250
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDE---MSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
P+ S+ +I+ A K GD+ AL++ + MS V P+ + YN +I+GF K+G
Sbjct: 251 PNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL--- 307
Query: 241 NEMWERL---LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
++ ER+ + + V N +Y ++ R G E+L + + M + Y+S
Sbjct: 308 -DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+++ L G+++GA V +DM + + D T ++ GLC+ G V+E+ E ++ +
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK 426
Query: 358 -SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
+++ +N + + K+ A I +L + L++D+ ++G LI G K G L +A
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ-GLSLDAISFGTLIDGYLKEGKLERA 485
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMD 459
L++ + ++ Y+S++N L K A VV+ M+
Sbjct: 486 LEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 196/404 (48%), Gaps = 19/404 (4%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ ++ K S EAL++F +M + G P V SFN +++ + A +
Sbjct: 224 VIYSFCKESKLFEALSVFYRMLKC-GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMM 282
Query: 146 G---VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
VSPN TYN +I CK + A+ + M G+ ++ +YG L++A + G
Sbjct: 283 SGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSS 342
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
+ AL + DEM+ +G+ + + YN I+ F GD A + R + + + + + +
Sbjct: 343 DEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL-RDMNSKNMQIDRFTQAI 401
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++RGL R G E++E ++ + + D+ +++L+H + L A ++ M+ +
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFEN---GKVE 378
+S D ++ +++G K GK+E + E+++ M + + N++ YN + GL + G E
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD--VDVFAYS 436
+N E+ D TY L++ K G + +A +L + + + G+ V + ++
Sbjct: 522 AVVNAMEI--------KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFN 573
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
MIN LCK + A V+ M +RG ++ LI F K+
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ +KR M A + M+ + ++N+LLN + E A+ +
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAMEI-----KDIVTYNTLLNESLKTGNVEEADDILSKMQK 560
Query: 145 AGVSPNVE--TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
+V T+N++I LCK +EKAK +L++M G+ PD +YGTLI + +K
Sbjct: 561 QDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQ 620
Query: 203 NAALEVFDEMSERGVEPDVMCYNMII 228
+E+ D + +GV P Y I+
Sbjct: 621 EKVVELHDYLILQGVTPHEHIYLSIV 646
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 12/386 (3%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
++++ A A EA LF ++ R G +P R++N+LL + + + AE + +
Sbjct: 308 VSIISALADSGRTLEAEALFEEL-RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
GVSP+ TY++LI +E A+ +L+ M ++P+ F + L+ RG+
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+V EM GV+PD YN++ID F K A ++R+L E + P+ V++N +
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML-SEGIEPDRVTWNTL 485
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I + GR + E++E M++ TY+ +I+ D +R+ M + +
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMN 382
P+VVT +++ K G+ ++ E EEM G + + YN I + G E+A+N
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 383 IWELL----LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
+ ++ L + LA++S LI+ ++ +A VL+ + G DV Y+++
Sbjct: 606 AFRVMTSDGLKPSLLALNS-----LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 439 INALCKERRLDDAAGVVSLMDKRGCK 464
+ AL + + V M GCK
Sbjct: 661 MKALIRVDKFQKVPVVYEEMIMSGCK 686
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 8/381 (2%)
Query: 100 LNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIK 159
L L+++++R V+ N ++ FA S +A + G+S T +I
Sbjct: 254 LRLYKEIERD-KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 160 VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP 219
L +A+ L + G++P +Y L+ K G L A + EM +RGV P
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEI 279
D Y+++ID + +G + A + + + V PN ++ ++ G G + ++ ++
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKE-MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
+ MK K D Y+ +I + LD A + M+ + PD VT N +++ CK
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 340 WGKVEESFELWEEMGQSGSRN-VISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVD 396
G+ + E++E M + G +YNI I G E ++ LL + + +
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPN 548
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
T+ L+ K+G N A++ LEE + G Y+++INA + + A
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 457 LMDKRGCKLNTHVCNPLIDGF 477
+M G K + N LI+ F
Sbjct: 609 VMTSDGLKPSLLALNSLINAF 629
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 166/386 (43%), Gaps = 41/386 (10%)
Query: 134 RAEKFF-AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
R+EK + A+ + + TYN LI + + EKA L+ M G + D +Y +
Sbjct: 179 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 193 INAAAKRGDLNAA--LEVFDEMSERGVEPDVMCYNMIIDGFFKSGD-------------- 236
I + + +++ L ++ E+ +E DV N II GF KSGD
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 237 ---------------------FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
L+A ++E L R+ + P +YN +++G + G +
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEEL-RQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
+ + M+K D TYS LI G + A+ V K+M V P+ + +L
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 336 GLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
G G+ +++F++ +EM G + + YN+ I + ++ AM ++ +L E +
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIE 476
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
D T+ LI CK+G A ++ E E RG Y+ MIN+ + R DD +
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 455 VSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ M +G N L+D + K+
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKS 562
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ + K A +F M+R GC P ++N ++N++ E+W+ ++ +
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PNV T+ L+ V K F A L M VGL+P Y LINA A+RG
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNV 262
A+ F M+ G++P ++ N +I+ F G+ + E + L ++E V P+VV+Y
Sbjct: 603 AVNAFRVMTSDGLKPSLLALNSLINAF---GEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+++ L R +F + ++E M + K D S L L M
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYM 702
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 2/242 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ + K + D A+ F +M G P ++N+L++ + AE+ F +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P TYN++I + ++ K LL M G+ P+ ++ TL++ K G N
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+E +EM G++P YN +I+ + + G +A + R++ + + P++++ N +I
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF-RVMTSDGLKPSLLALNSLI 626
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R +E+ + + MK+N K DV TY++L+ L ++ VY++MI
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 325 PD 326
PD
Sbjct: 687 PD 688
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 295 YSSLIHGLSQMGNLDGAQRVYKD-MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
YS LIH L + ++++Y+ ++ ++ + +T NA++ + +E++ L +M
Sbjct: 170 YSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGLCKN 410
Q G + + ++Y++ I+ L + K++ M + L + L +D +I G K+
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVM-LLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 411 GYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC 470
G +KALQ+L A+ G S+I+AL R +A + + + G K T
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 471 NPLIDGFIKNSNL 483
N L+ G++K L
Sbjct: 343 NALLKGYVKTGPL 355
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 8/376 (2%)
Query: 7 PLSPHRLLNLLKSEKNP-HSALQLFQHA-TRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P +P+ + ++LK N ALQ F H Y H ++ + +A+ L P
Sbjct: 53 PWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAID-IAARLHLHPTVW 111
Query: 65 HIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
+I + + + S + + YA PD+A+ LF M GC + SFN++L+
Sbjct: 112 SLIHRMRSLR-IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHE-HGCFQDLASFNTILD 169
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
S++ E+A + F S + TYNV++ C + KA +L+ M G+ P
Sbjct: 170 VLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
+ +Y T++ + G + A E F EM +R E DV+ Y ++ GF +G+ +A ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+ ++R E V P+V +YN MI+ L + ++ ++E M + + +V TY+ LI GL
Sbjct: 289 DEMIR-EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVIS 363
G + + + M P+ T N M+ + +VE++ L+E+MG N+ +
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 364 YNIFIKGLFENGKVEE 379
YNI I G+F + E+
Sbjct: 408 YNILISGMFVRKRSED 423
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 48/362 (13%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P ++F + +A + + ++A K F G ++ ++N ++ VLCK + EKA L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
R + G D +Y ++N ALEV EM ERG+ P++ YN ++ GFF+
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
+G A WE L MKK + + DV
Sbjct: 243 AGQIRHA---WEFFL---------------------------------EMKKRDCEIDVV 266
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY++++HG G + A+ V+ +MI V P V T NAM+ LCK VE + ++EEM
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ G NV +YN+ I+GLF G+ + + + E + TY ++I +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSE 385
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD---------AAGVVSLMDKRGC 463
+ KAL + E+ ++ Y+ +I+ + +R +D A ++ L K G
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGS 445
Query: 464 KL 465
+L
Sbjct: 446 RL 447
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 163/346 (47%), Gaps = 6/346 (1%)
Query: 134 RAEKFFAYFDTAG--VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
+A +FF + D + ++++ I + + L+ M + + P ++
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+ A G + A+++F M E G D+ +N I+D KS KA E++ L
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+V + V+YNV++ G R ++LE+ + M + ++ TY++++ G + G + A
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKG 370
+ +M R DVVT +++G G+++ + +++EM + G +V +YN I+
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
L + VE A+ ++E ++ + TTY +LI GL G ++ ++++ E+ G +
Sbjct: 310 LCKKDNVENAVVMFEEMV-RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
+ Y+ MI + ++ A G+ M C N N LI G
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
T++ + + G D A +++ +M D+ + N +L+ LCK +VE+++EL+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 354 GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
S + ++YN+ + G + +A+ + + ++ E + + TTY ++ G + G +
Sbjct: 188 RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV-ERGINPNLTTYNTMLKGFFRAGQI 246
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
A + E + R ++DV Y+++++ + A V M + G + N +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 474 IDGFIKNSNL 483
I K N+
Sbjct: 307 IQVLCKKDNV 316
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK--HDVFTYSSLIHGLSQMGNLDGAQ 312
PN+V N +++ L G ++L+ + + + R+ HD ++ I +++
Sbjct: 56 PNLV--NSVLKRLWNHG--PKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVW 111
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGL 371
+ M R+ P T + GK +++ +L+ M + G +++ S+N + L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
++ +VE+A ++ L G +VD+ TY ++++G C KAL+VL+E RG + +
Sbjct: 172 CKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ Y++M+ + ++ A M KR C+++ ++ GF
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 188/391 (48%), Gaps = 6/391 (1%)
Query: 26 ALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLT 85
A + F A R P + HS ++ + S +I A E S V
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREY-NYFEISSKVFWI 143
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+ +AY++ ++P EA F +M FG +P V + LL++ + A++FF
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVE-FGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P+ +TY++L++ + R+ A+ + M D +Y L++A K GD++
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++F EM G++PD + + I + +GD A ++ +R+ R + V PNV ++N +I+
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV-PNVYTFNHIIK 321
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L + + ++ + + M + D +TY+S++ ++ A ++ M + P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLF-ENGKVEEAMNI 383
D T N +L L + G+ + + E+WE M + V +Y + I GL + GK+EEA
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRY 441
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+E+++ E + STT +L + L G ++
Sbjct: 442 FEMMIDE-GIPPYSTTVEMLRNRLVGWGQMD 471
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TYS L+ G +++ + GA++V+ +M+ R D++ NA+L+ LCK G V+ +++++EM
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
G G + + S+ IFI + G V A + + + L + T+ +I LCKN
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM-KRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
++ A +L+E +G + D + Y+S++ C ++ A ++S MD+ C + H N
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 473 LIDGFIK 479
++ I+
Sbjct: 389 VLKLLIR 395
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 166/353 (47%), Gaps = 15/353 (4%)
Query: 135 AEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP-DKFSYGT- 191
A +FF + + ++E+Y++L+++L ++F L W + R + F +
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFA-----LLWDFLIEAREYNYFEISSK 139
Query: 192 ---LINAAAKRGDL-NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
++ A R +L + A F+ M E G++P V + ++ A E + +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+ + P+ +Y++++RG +R S + ++++ M + D+ Y++L+ L + G+
Sbjct: 200 -KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNI 366
+DG +++++M + PD + ++ C G V ++++ + M + NV ++N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
IK L +N KV++A + + ++ + A D+ TY ++ C + +N+A ++L +
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGA-NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT 377
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
D Y+ ++ L + R D A + M +R +I G ++
Sbjct: 378 KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS-----LIHGLSQMGNLDGAQR 313
SY++++ L +F+ +W+ + + R+++ F SS + S+ A R
Sbjct: 104 SYHILVEILGSSKQFAL---LWDFLIE-AREYNYFEISSKVFWIVFRAYSRANLPSEACR 159
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI----SYNIFIK 369
+ M+ + P V + +L+ LC V + E + G++ ++ +Y+I ++
Sbjct: 160 AFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF---GKAKGFGIVPSAKTYSILVR 216
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD 429
G A +++ +L E VD Y L+ LCK+G ++ ++ +E + G
Sbjct: 217 GWARIRDASGARKVFDEML-ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 430 VDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
D ++++ I+A C + A V+ M + N + N +I KN +
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A+ F G+ PNV TYN +I C + A LLR M + PD ++ LIN
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
A K ++ A E++ EM + P + YN +IDGF K A M + + +
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCS 147
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+VV+++ +I G + R +EI+ M + + TY++LIHG Q+G+LD AQ +
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
+MI V+PD +T + ML GLC ++ ++F + E++ +S
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 132/250 (52%), Gaps = 3/250 (1%)
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
M + ++ DV+ I+D K G+ + A ++ + E+ +FPNV++YN MI G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEM-HEKGIFPNVLTYNCMIDSFCHSG 59
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
R+S++ ++ M + + D+ T+S+LI+ + + A+ +YK+M+ + P +T N
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
+M++G CK +V+++ + + M G S +V++++ I G + +V+ M I+ +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF-CEMHR 178
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
+ ++ TY LIHG C+ G L+ A +L E G D + M+ LC ++ L
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 451 AAGVVSLMDK 460
A ++ + K
Sbjct: 239 AFAILEDLQK 248
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
+ +V ++ LCK A+ L M G+ P+ +Y +I++ G + A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
++ M E+ + PD++ ++ +I+ F K +A E+++ +LR ++FP ++YN MI G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR-WSIFPTTITYNSMIDG 124
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
+ R ++ + + M DV T+S+LI+G + +D ++ +M R + +
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWE 385
VT +++G C+ G ++ + +L EM G + + I+++ + GL ++ +A I E
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 386 LL 387
L
Sbjct: 245 DL 246
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + +F++L+NAF + AE+ + + P TYN +I CK+ + AK +
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M+ G PD ++ TLIN K ++ +E+F EM RG+ + + Y +I GF +
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
GD A ++ ++ V P+ ++++ M+ GL ++ I E ++K+E H
Sbjct: 198 VGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHH 253
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK 342
M ++ K DV ++++ L + GN AQ ++ +M + + P+V+T N M++ C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 343 VEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
++ +L M + + ++++++ I + KV EA I++ +L + + TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPT-TITYN 119
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
+I G CK ++ A ++L+ +G DV +S++IN CK +R+D+ + M +R
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 462 GCKLNTHVCNPLIDGFIKNSNL 483
G NT LI GF + +L
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDL 201
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K+ D+A + M GC P V +F++L+N + +++ + + F
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ N TY LI C+ + + A+ LL M G+ PD ++ ++ + +L
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 205 ALEVFDEMSE 214
A + +++ +
Sbjct: 239 AFAILEDLQK 248
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 212/461 (45%), Gaps = 50/461 (10%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
S +L+N+L PH A +F+ L P+L+ + +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFK-----------------TLAETGHRPSLISYTTLLAA 89
Query: 69 AIEAAQNCNCSEDVPLTLLKAYAK-RSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
+T+ K Y S+ E K+D +F FN+++NAF+
Sbjct: 90 ---------------MTVQKQYGSISSIVSEVEQSGTKLDSIF--------FNAVINAFS 126
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRP 184
S E A + G++P TYN LIK + E++ LL M V + P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA-NEM 243
+ ++ L+ A K+ + A EV +M E GV PD + YN I + + G+ ++A +E+
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
E+++ +E PN + +++ G R GR + L RMK+ + ++ ++SLI+G
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVI 362
++ + DG V M V DV+T + ++N G +E++ ++++EM ++G + +
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
+Y+I KG + ++A + E L+ E+ V + +I G C NG ++ A++V +
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVESRPNV--VIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
G ++ + +++ + ++ A V+ +M RGC
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM--RGC 463
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 173/380 (45%), Gaps = 14/380 (3%)
Query: 112 CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
CR VRS L+N + A+ F G P++ +Y L+ + ++++
Sbjct: 42 CRT-VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS 100
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
++ + G + D + +INA ++ G++ A++ +M E G+ P YN +I G+
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 232 FKSGDFLKANEMWERLLREET--VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+G +++E+ + +L E V PN+ ++NV+++ + + E+ E+ ++M++ +
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQR--VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
D TY+++ Q G A+ V K ++ + P+ TC ++ G C+ G+V +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 348 ELWEEMGQ-SGSRNVISYNIFIKGLFE---NGKVEEAMNIWELLLGETALAVDSTTYGIL 403
M + N++ +N I G E ++E + L+ E + D TY +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT----LMKECNVKADVITYSTV 336
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
++ GY+ KA QV +E G D AYS + + + A ++ +
Sbjct: 337 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES- 395
Query: 464 KLNTHVCNPLIDGFIKNSNL 483
+ N + +I G+ N ++
Sbjct: 396 RPNVVIFTTVISGWCSNGSM 415
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 40/278 (14%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE--------- 136
L++A+ K+ +EA + +KM+ G RP ++N++ + + RAE
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEEC-GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 137 ----------------------------KFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
+F V N+ +N LI + + +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
+L M ++ D +Y T++NA + G + A +VF EM + GV+PD Y+++
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
G+ ++ + KA E+ E L+ E PNVV + +I G G +++ ++ +M K
Sbjct: 373 KGYVRAKEPKKAEELLETLIVESR--PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 430
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
++ T+ +L+ G ++ A+ V + M G V P+
Sbjct: 431 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 187/433 (43%), Gaps = 79/433 (18%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL+ KM + GC P S+NS++ E P+V+TY +++
Sbjct: 496 ALSRIEKMVNL-GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVV 554
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
LCKK + + A ++ M +GLRP Y ++I + K+G + A E F +M E G++
Sbjct: 555 NELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ 614
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLR----------------------------- 249
PD + Y ++I+ + ++G +ANE+ E +++
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 250 -----EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL-- 302
E+ + PNVV Y +I + G F S ++ M +N+ KHD Y +L+ GL
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Query: 303 ---------------------------------SQMGNLDGAQRVYKDMIGR---RVSPD 326
S +GN G++ ++IG+ + P+
Sbjct: 735 AMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNY-GSKSFAMEVIGKVKKSIIPN 793
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWE 385
+ N ++ G C G+++E++ E M + G N+++Y I +K E G +E A++++E
Sbjct: 794 LYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
T D Y L+ GLC AL ++ E + G + + +Y ++ LC
Sbjct: 854 ----GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 446 RRLDDAAGVVSLM 458
R +A VV M
Sbjct: 910 RLTMEAVKVVKDM 922
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 171/402 (42%), Gaps = 13/402 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L + KR EA LF M+ V G + L+ + A + +
Sbjct: 242 SLFYCFCKRGCAAEAEALFDHME-VDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVE 300
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ +N LI K +K + + M G++ + F+Y +I + K G+++
Sbjct: 301 RSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDY 360
Query: 205 ALEVF-DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
AL +F + + +V CY +I GF+K G KA ++ R+L + + P+ ++Y V+
Sbjct: 361 ALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML-DNGIVPDHITYFVL 419
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR- 322
++ L +C ++ I + + N + + +GN++ I R+
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGCGINPPV-------IDDLGNIEVKVESLLGEIARKD 472
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAM 381
+ V + LC + E+M G + SYN IK LF+ +E+
Sbjct: 473 ANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLA 532
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ ++ E D TY I+++ LCK + A +++ E G V YSS+I +
Sbjct: 533 SLVNII-QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGS 591
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
L K+ R+ +A + M + G + + +I+ + +N +
Sbjct: 592 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 160/375 (42%), Gaps = 54/375 (14%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA----VSEQWERAEKFFA 140
+++ + K+ EA F KM G +P ++ ++N +A + E E E+
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 141 YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
+F + P+ TY VLI K EK L M GL P+ Y LI K+G
Sbjct: 646 HF----LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKG 701
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE---------MWERLLR-- 249
D + +F M E ++ D + Y ++ G +++ K + + +RL+R
Sbjct: 702 DFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTK 761
Query: 250 -------------------------EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
++++ PN+ +N +I G GR E+ E M+
Sbjct: 762 PLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQ 821
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
K ++ TY+ L+ + G+++ A +++ G PD V + +L GLC + +
Sbjct: 822 KEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPL 878
Query: 345 ESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV--DSTTYG 401
++ L EM +SG + N SY ++ L + EA+ + + + AL + S +
Sbjct: 879 DALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDM---AALDIWPRSINHT 935
Query: 402 ILIHGLCKNGYLNKA 416
LI+ LC+ L +A
Sbjct: 936 WLIYILCEEKKLREA 950
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 136/323 (42%), Gaps = 38/323 (11%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P+ + ++ L K R F++A+ L + G P + S +++ + A
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL----------------- 248
F+++ ERG + C + G G +A M + L
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 249 ---------REETVFPNV---------VSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
E +F ++ V Y +++ + + ++ ++ RM + +
Sbjct: 246 CFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFEL 305
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +++LIHG ++G LD + ++ MI + V +V T + M+ CK G V+ + L+
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 351 --EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ SRNV Y I G ++ G +++A+++ +L + + D TY +L+ L
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML-DNGIVPDHITYFVLLKMLP 424
Query: 409 KNGYLNKALQVLEEAEHRGGDVD 431
K L A+ +L+ G ++
Sbjct: 425 KCHELKYAMVILQSILDNGCGIN 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 6/307 (1%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDE-MSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G+ D YG LI + G A +++ + G+ PD + ++ K F +
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A +R++ P+ S ++++ L RF E+ +E++K+ ++ L
Sbjct: 150 ARAHLDRIIASGYA-PSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLF 208
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC-NAMLNGLCKWGKVEESFELWEEMGQSGS 358
GL G+L+ A + + G P V ++ CK G E+ L++ M G
Sbjct: 209 KGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY 268
Query: 359 R-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
+ + Y +K ++ + AM ++ L + E + +D + LIHG K G L+K
Sbjct: 269 YVDKVMYTCLMKEYCKDNNMTMAMRLY-LRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV-VSLMDKRGCKLNTHVCNPLIDG 476
+ + +G +VF Y MI + CKE +D A + V+ N H LI G
Sbjct: 328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFG 387
Query: 477 FIKNSNL 483
F K +
Sbjct: 388 FYKKGGM 394
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 53/307 (17%)
Query: 191 TLINAAAKRGDLNAALEVF-----------------DEMSERGVEPDVMCYNMIIDGFFK 233
+LI +RG L++A EV D + G+E D CY +I +
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTE 107
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G A + + + + P+ + M+ L + RF E+ R H
Sbjct: 108 MGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEA-----------RAH--- 153
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
LD +I +P + + +++ LC + E+F +E++
Sbjct: 154 --------------LD-------RIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQV 192
Query: 354 GQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ GS + KGL +G + EA+ + + L G T + + Y L + CK G
Sbjct: 193 KERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGC 252
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
+A + + E G VD Y+ ++ CK+ + A + M +R +L+ + N
Sbjct: 253 AAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNT 312
Query: 473 LIDGFIK 479
LI GF+K
Sbjct: 313 LIHGFMK 319
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
P+ + + T+I G L+ A + M + G+ P+++ Y +++ ++GD A ++
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
+E E P+ V Y+ +++GL R ++L + M+K+ + +Y L+ L
Sbjct: 852 FEGTNCE----PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
A +V KDM + P + ++ LC+ K+ E+ L+ M QSG
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 156/292 (53%), Gaps = 5/292 (1%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N+L++ F + + E+AE +Y G P++ TYNVL+ ++A+G++ M
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALE-VFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G++ D +SY L+ + + + EM RG DV+ Y+ +I+ F ++ +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNT 341
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
KA ++E + R++ + NVV+Y +I+ R G S + ++ ++M + D Y++
Sbjct: 342 RKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQS 356
++ L + GN+D A V+ DMI ++PD ++ N++++GLC+ G+V E+ +L+E+M G+
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 357 GSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ +++ I GL K+ A +W+ ++ + +D LI C
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM-DKGFTLDRDVSDTLIKASC 511
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 192/469 (40%), Gaps = 73/469 (15%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
K M D A+ +F +M R R +N + ++E AE + G S
Sbjct: 20 VKSGMIDNAVQVFDEM-RHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
TY+ I LCK ++F+ LL M +G PD +++ ++ + + A++ F
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR--------------------- 249
M +RG EPDV+ Y ++I+G F++G A E+W ++R
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 250 ----------EET----VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
EE V + V YN +I G + GR ++ + M K + D+ TY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGR-----------------RVSP------------- 325
+ L++ L A+ V +M+ RVS
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 326 -----DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEE 379
DVV+ + ++ C+ +++ L+EEM Q G NV++Y IK G
Sbjct: 319 PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSV 378
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
A + + + E L+ D Y ++ LCK+G ++KA V + D +Y+S+I
Sbjct: 379 AKKLLDQM-TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 440 NALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+ LC+ R+ +A + M + C + +I G I+ L+ +K
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 86 LLKAYAKRSMPDEALN-LFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
LLK + + S PD+ N + ++M+ C V S+++L+ F + +A + F
Sbjct: 296 LLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ NV TY LIK ++ AK LL M+ +GL PD+ Y T+++ K G+++
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A VF++M E + PD + YN +I G +SG +A +++E + +E P+ +++ +I
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC-PDELTFKFII 472
Query: 265 RGLSRCGRFSESLEIWERM 283
GL R + S + ++W++M
Sbjct: 473 GGLIRGKKLSAAYKVWDQM 491
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 152/335 (45%), Gaps = 41/335 (12%)
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF-------- 237
+ +Y + I K G ++ A++VFDEM YN I + F
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 238 -----------------------LKANEMWERLLRE-ETV--FPNVVSYNVMIRGLSRCG 271
+K ++ + LL + ET+ P++ ++NV + L R
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+ +++ + M + R+ DV +Y+ LI+GL + G + A ++ MI VSPD C
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSG--SRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
A++ GLC KV+ ++E+ E +S + + YN I G + G++E+A + + +
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL-KSYMS 247
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
+ D TY +L++ N L +A V+ E G +D ++Y+ ++ C+ D
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 450 DAAG-VVSLMDKRG-CKLNTHVCNPLIDGFIKNSN 482
+V M+ RG C + ++ + LI+ F + SN
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSY--STLIETFCRASN 340
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL++ + + S +A LF +M R G V ++ SL+ AF A+K
Sbjct: 330 TLIETFCRASNTRKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+SP+ Y ++ LCK +KA G+ M + PD SY +LI+ + G +
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
A+++F++M + PD + + II G + A ++W++++
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 175/394 (44%), Gaps = 11/394 (2%)
Query: 70 IEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRK-MDRVFGCRPGVRSFNSLLNAFAV 128
+ A CN V L+K Y K + +E +FR+ +D F V + N LLN
Sbjct: 156 VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSV--SVVTCNHLLNGLLK 213
Query: 129 SEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
+ E + ++ G+ PN T+N+L V C F + L M G PD +
Sbjct: 214 LDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVT 273
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
Y TL+++ +RG L A ++ M R V PD++ Y +I G K G +A++ + R++
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ + P+ +SYN +I + G +S ++ M N D FT ++ G + G L
Sbjct: 334 -DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 392
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW----EEMGQSGSRNVISY 364
A ++ +V C+ ++ LC+ GK + L EE G +Y
Sbjct: 393 LSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TY 450
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
N I+ L +EEA+ + L + + +D+ TY LI LC+ G +A ++ E
Sbjct: 451 NNLIESLSRCDAIEEALVLKGKLKNQNQV-LDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
D F +++ CKE D A ++SL
Sbjct: 510 DSEVKPDSFICGALVYGYCKELDFDKAERLLSLF 543
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 226/534 (42%), Gaps = 85/534 (15%)
Query: 3 DLPKP-LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLP 61
++PKP L+P L NLL +NP + + H Y S +L ++ V S L+P
Sbjct: 24 NIPKPILNP--LYNLLPQSQNPSKIVDVICSTLNHSDY---SVLLPNLRDEVKS---LIP 75
Query: 62 HAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNS 121
H +G E ++ LL+ + S A+ F+ + G RP V ++
Sbjct: 76 H----LGYPEISR----------VLLRFQSDAS---RAITFFKWVKFDLGKRPNVGNYCL 118
Query: 122 LLNAFAVSEQWERAEKFFA------------------------------YFDT------- 144
LL+ S+++ A +F FD
Sbjct: 119 LLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLK 178
Query: 145 ----------------AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
+G S +V T N L+ L K E + M VG+ P+ ++
Sbjct: 179 LGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYT 238
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
+ L N + + ++M E G EPD++ YN ++ + + G +A +++ +
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
R V P++V+Y +I+GL + GR E+ + + RM K D +Y++LI+ + G +
Sbjct: 299 RRRVV-PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI-- 366
++++ +M+G V PD TC ++ G + G++ + E+ + I + +
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD--IPFEVCD 415
Query: 367 -FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I L + GK A ++ + ++ E TY LI L + + +AL + + ++
Sbjct: 416 FLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKN 475
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ +D Y ++I LC+ R +A +++ M K ++ +C L+ G+ K
Sbjct: 476 QNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCK 529
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
++ ++ M RV G P +FN L N F + + F + G P++ TYN
Sbjct: 218 EDCWQVYSVMCRV-GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L+ C++ ++A L + M + PD +Y +LI K G + A + F M +RG
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
++PD M YN +I + K G ++ ++ +L +V P+ + V++ G R GR +
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEML-GNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI---GRRVSPDVVTCNAM 333
+ +++ + LI L Q G A+ + +I G P+ T N +
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNL 453
Query: 334 LNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ L + +EE+ L ++ Q+ + +Y I L G+ EA ++ + ++
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF-DSE 512
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ DS G L++G CK +KA ++L D +Y+S++ A+C+
Sbjct: 513 VKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCE 564
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 6/294 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ +Y +R EA L++ M R P + ++ SL+ + A + F
Sbjct: 276 TLVSSYCRRGRLKEAFYLYKIMYRR-RVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVD 334
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+ +YN LI CK+ +++K LL M G + PD+F+ ++ + G L +
Sbjct: 335 RGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLS 394
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+ E+ V+ + +I + G A + +R++ EE +YN +I
Sbjct: 395 AVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLI 454
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
LSRC E+L + ++K + D TY +LI L ++G A+ + +M V
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 325 PDVVTCNAMLNGLCK---WGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENG 375
PD C A++ G CK + K E L+ + SYN +K + E G
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE--SYNSLVKAVCETG 566
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
V ++++++G + G E ++ + + V T + L++GL ++ ++ +VY
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGK 376
M + P+ T N + N C E + E+M + G ++++YN + G+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
++EA +++++ + D TY LI GLCK+G + +A Q RG D +Y+
Sbjct: 287 LKEAFYLYKIMYRRRVVP-DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
++I A CKE + + ++ M + C +++GF++ L
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 392
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 10/361 (2%)
Query: 115 GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL 174
V +F ++ +A +++ + A F + + PN+ +N L+ LCK + KA+ +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
M PD +Y L+ K +L A EVF EM + G PD++ Y++++D K+
Sbjct: 227 ENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G +A + R + P Y+V++ R E+++ + M+++ K DV
Sbjct: 286 GRVDEALGIV-RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
++SLI + + RV K+M + V+P+ +CN +L L + G+ +E+F+++ +M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 355 QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+ + +Y + IK E ++E A +W+ + + T+ +LI+GLC+
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP-SMHTFSVLINGLCEERTTQ 463
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
KA +LEE G + + L KE R D V+ +++ K+N V PL
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED----VLKFLNE---KMNVLVNEPLC 516
Query: 475 D 475
D
Sbjct: 517 D 517
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 14/279 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A K +A +F M F P ++++ LL + +A + F A
Sbjct: 209 LLSALCKSKNVRKAQEVFENMRDRFT--PDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ TY++++ +LCK ++A G++R M +P F Y L++ L A
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE--RLLRE---ETVFPNVVSY 260
++ F EM G++ DV +N +I G F KAN M R+L+E + V PN S
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLI------GAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
N+++R L G E+ +++ +M K + D TY+ +I + ++ A +V+K M
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRK 439
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
+ V P + T + ++NGLC+ +++ L EEM + G R
Sbjct: 440 KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 141/273 (51%), Gaps = 17/273 (6%)
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCG 271
+R E V Y+M+I+ + + MW+ + +R++ + NV ++ +++R +R
Sbjct: 127 QRHYEHSVRAYHMMIES---TAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQ 182
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
+ E++ + M+K + ++ ++ L+ L + N+ AQ V+++M R +PD T +
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYS 241
Query: 332 AMLNGLCKWGK---VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELL 387
+L G WGK + ++ E++ EM +G ++++Y+I + L + G+V+EA+ I +
Sbjct: 242 ILLEG---WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298
Query: 388 LGETALAVDST-TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER 446
+ ++ +T Y +L+H L +A+ E E G DV ++S+I A CK
Sbjct: 299 --DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKAN 356
Query: 447 RLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
R+ + V+ M +G N+ CN ++ I+
Sbjct: 357 RMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 37/258 (14%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
PN+V++N ++ L + ++ E++E M+ + D TYS L+ G + NL A+ V
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFE 373
+++MI PD+VT + M++ LCK G+V+E+ + M S + Y++ +
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG------ 427
++EEA++ + L + + + D + LI CK + +VL+E + +G
Sbjct: 320 ENRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Query: 428 ------------GD----VDVF------------AYSSMINALCKERRLDDAAGVVSLMD 459
G+ DVF Y+ +I C+++ ++ A V M
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMR 438
Query: 460 KRGCKLNTHVCNPLIDGF 477
K+G + H + LI+G
Sbjct: 439 KKGVFPSMHTFSVLINGL 456
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 118/235 (50%), Gaps = 2/235 (0%)
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+V +Y++MI ++ ++ ++ M+K ++ +V T+ ++ ++ +D A +
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRK-KKMLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENG 375
M + P++V N +L+ LCK V ++ E++E M + + +Y+I ++G +
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEP 251
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+ +A ++ ++ + D TY I++ LCK G +++AL ++ + F Y
Sbjct: 252 NLPKAREVFREMI-DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
S +++ E RL++A M++ G K + V N LI F K + + +++ L
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
G +++CN +L+ +R DEA ++FRKM +V C P ++ ++ F
Sbjct: 372 GVTPNSKSCN-------IILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIKMFC 422
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
++ E A+K + Y GV P++ T++VLI LC++R +KA LL M +G+RP
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 188 SYGTL 192
++G L
Sbjct: 483 TFGRL 487
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 183/384 (47%), Gaps = 24/384 (6%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPH-APHII 67
+P + +L +P +AL +R P + H+ ++ + S +P+ P I
Sbjct: 26 TPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQE--IPYEVPKI- 82
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRV---FGCRPGVRSFNSLLN 124
I ++CN D L R+M RK D + P + +N+LL+
Sbjct: 83 -TILMIKSCNSVRDA---LFVVDFCRTM--------RKGDSFEIKYKLTP--KCYNNLLS 128
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
+ A E ++ + VSP++ T+N L+ CK +AK + W+ G P
Sbjct: 129 SLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDP 188
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
D F+Y + I +R +++AA +VF EM++ G + + Y +I G F++ +A +
Sbjct: 189 DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL 248
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+ ++++ PNV +Y V+I L G+ SE++ ++++M ++ K D Y+ LI
Sbjct: 249 VK-MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVIS 363
LD A + + M+ + P+V+T NA++ G CK V ++ L +M Q+ ++I+
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLIT 366
Query: 364 YNIFIKGLFENGKVEEAMNIWELL 387
YN I G +G ++ A + L+
Sbjct: 367 YNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 120/221 (54%), Gaps = 2/221 (0%)
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
YN ++ L+R G E ++ M ++ D++T+++L++G ++G + A++ +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVE 378
PD T + + G C+ +V+ +F++++EM Q+G RN +SY I GLFE K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA+++ + + + + TY +LI LC +G ++A+ + ++ G D Y+ +
Sbjct: 243 EALSLL-VKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
I + C LD+A+G++ M + G N N LI GF K
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+ + + +R D A +F++M + GC S+ L+ +++ + A
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
PNV TY VLI LC + +A L + MS G++PD Y LI + L+
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A + + M E G+ P+V+ YN +I GF K + KA + ++L E+ + P++++YN +I
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKML-EQNLVPDLITYNTLI 371
Query: 265 RGLSRCGRFSESLEIWERMKKN 286
G G + + M+++
Sbjct: 372 AGQCSSGNLDSAYRLLSLMEES 393
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 77 NCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
NC +V L+ A EA+NLF++M G +P + L+ +F + +
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES-GIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A + G+ PNV TYN LIK CKK KA GLL M L PD +Y TLI
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPD 220
G+L++A + M E G+ P+
Sbjct: 373 GQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
N V + + R R +S EI ++ Y++L+ L++ G ++ +R+Y
Sbjct: 91 NSVRDALFVVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLY 143
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFEN 374
+M+ VSPD+ T N ++NG CK G V E+ + + Q+G + +Y FI G
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRR 203
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
+V+ A +++ + + + +Y LI+GL + +++AL +L + + +V
Sbjct: 204 KEVDAAFKVFKEM-TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
Y+ +I+ALC + +A + M + G K + + LI F L
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL-----CKWGKV 343
KH+V +Y+SL+ L ++ MI +CN++ + L C+ +
Sbjct: 57 KHNVTSYASLVTLLCSQEIPYEVPKITILMIK--------SCNSVRDALFVVDFCRTMRK 108
Query: 344 EESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
+SFE+ ++ YN + L G VEE ++ +L E ++ D T+ L
Sbjct: 109 GDSFEIKYKLTPK------CYNNLLSSLARFGLVEEMKRLYTEML-EDLVSPDIYTFNTL 161
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
++G CK GY+ +A Q + G D D F Y+S I C+ + +D A V M + GC
Sbjct: 162 VNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 464 KLNTHVCNPLIDGFIK----NSNLTLLFK 488
N LI G + + L+LL K
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 184/397 (46%), Gaps = 6/397 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ AY K DEAL LF M GC P ++N++L+ + K +
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 145 AGVSPNVETYNVLIKVLCKKREFEK-AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G SPN T+N ++ LC + +K + R M G PD+ ++ TLI+A + G
Sbjct: 450 NGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A +++ EM+ G V YN +++ + GD+ ++ E ++ + P SY++M
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDW-RSGENVISDMKSKGFKPTETSYSLM 567
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
++ ++ G + I R+K+ + +L+ + L G++R +
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
PD+V N+ML+ + +++ + E + + G S ++++YN + G+ +A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
I + L ++ L D +Y +I G C+ G + +A+++L E RG +F Y++ ++
Sbjct: 688 ILKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ V+ M K C+ N ++DG+ +
Sbjct: 747 TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 178/370 (48%), Gaps = 6/370 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK-REFEKAKGLL 174
VR++ ++L+A++ + ++E+A F G SP + TYNV++ V K R + K G+L
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
M GL+ D+F+ T+++A A+ G L A E F E+ G EP + YN ++ F K+
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 235 GDFLKANEMWERLLREETVFP-NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G + +A + + + EE P + V+YN ++ R G E+ + E M K +
Sbjct: 330 GVYTEALSVLKEM--EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
TY+++I + G D A +++ M P+ T NA+L+ L K + E ++ +M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 354 GQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+G S N ++N + L N +++ +N + D T+ LI + G
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
A ++ E G + V Y++++NAL ++ V+S M +G K +
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 473 LIDGFIKNSN 482
++ + K N
Sbjct: 567 MLQCYAKGGN 576
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 192/439 (43%), Gaps = 50/439 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA-VSEQWER--------- 134
T+L AY++ ++A++LF +M + G P + ++N +L+ F + W +
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEM-GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 135 --------------------------AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
A++FFA + G P TYN L++V K +
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
+A +L+ M D +Y L+ A + G A V + M+++GV P+ + Y +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
D + K+G +A +++ ++E PN +YN ++ L + R +E +++ MK N
Sbjct: 394 DAYGKAGKEDEALKLFYS-MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
+ T+++++ G RV+++M PD T N +++ + G ++ +
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 349 LWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
++ EM ++G + V +YN + L G N+ + + T+Y +++
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK-GFKPTETSYSLMLQCY 571
Query: 408 CKNG-YLNKALQVLEEAEHRGGDVDVFAYSSMINALC----KERRLDDAAGVVSLMDKRG 462
K G YL +E E+R + +F ++ L K R L + +L K G
Sbjct: 572 AKGGNYLG-----IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 463 CKLNTHVCNPLIDGFIKNS 481
K + + N ++ F +N+
Sbjct: 627 YKPDMVIFNSMLSIFTRNN 645
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+ A LF+K G +P + FNS+L+ F + +++AE G+SP++ TYN
Sbjct: 616 ERAFTLFKK----HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L+ + ++ E KA+ +L+ + L+PD SY T+I +RG + A+ + EM+ERG
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ P + YN + G+ G F + ++ E + + + PN +++ +++ G R G++SE+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR-PNELTFKMVVDGYCRAGKYSEA 790
Query: 277 LEIWERMK 284
++ ++K
Sbjct: 791 MDFVSKIK 798
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 152/335 (45%), Gaps = 38/335 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L + M +FR+M + G P +FN+L++A+ A K +
Sbjct: 461 TMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD--- 201
AG + V TYN L+ L +K ++ + ++ M G +P + SY ++ AK G+
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 202 --------------------------------LNAALEVFDEMSERGVEPDVMCYNMIID 229
L + F + G +PD++ +N ++
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
F ++ + +A + E + RE+ + P++V+YN ++ R G ++ EI + ++K++ K
Sbjct: 640 IFTRNNMYDQAEGILESI-REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
D+ +Y+++I G + G + A R+ +M R + P + T N ++G G E ++
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
E M ++ R N +++ + + G GK EAM+
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 176/408 (43%), Gaps = 28/408 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L A A+ + EA F ++ + G PG ++N+LL F + + A +
Sbjct: 286 TVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ TYN L+ + ++A G++ M+ G+ P+ +Y T+I+A K G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNV 262
AL++F M E G P+ YN ++ K ++NEM + L ++ PN ++N
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS---RSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
M+ G ++ MK + D T+++LI + G+ A ++Y +M
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENG------ 375
+ V T NA+LN L + G + +M G + SY++ ++ + G
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA----EHRGGDVD 431
++E + ++ +L+ L + +AL E A + G D
Sbjct: 582 RIENRIKEGQIF-----------PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 630
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ ++SM++ + D A G++ + + G + N L+D +++
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 43/340 (12%)
Query: 157 LIKVLCKKREFEKAKGLLRWM-----SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
L+K L +E+A L W+ SG L+ D + + + A ++ D+
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSG-ALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
+ + DV Y I+ + ++G + KA +++ER+ +E P +V+YNV++ + G
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM-KEMGPSPTLVTYNVILDVFGKMG 259
Query: 272 R-FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
R + + L + + M+ K D FT S+++ ++ G L A+ + ++ P VT
Sbjct: 260 RSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
NA+L K G E+ + +EM E
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEME-----------------------------------E 344
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
+ DS TY L+ + G+ +A V+E +G + Y+++I+A K + D+
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
A + M + GC NT N ++ K S + K L
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
++ FA + +WE A F G+ N E+ N+L+ LCK++ E+A+ +L +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-H 219
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ P+ ++ I+ K + AL EM G P V+ Y II + + +F+K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
EM + + PN ++Y ++ L+ F E+L + RMK++ K D Y+ LIH
Sbjct: 280 EMLSEMEANGSP-PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 302 LSQMGNLDGAQRVYK-DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
L++ G L+ A+RV++ +M VS + T N+M+ C + +++ EL +EM S N
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 361 --VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
V +Y ++ F+ G V E + + ++ + L++D +TY LI LC+ A
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 419 VLEE 422
+ EE
Sbjct: 459 LFEE 462
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 156/332 (46%), Gaps = 16/332 (4%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ LL+ F + W A + ++ G + + Y++ + +L K +++++ K + M
Sbjct: 91 HKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR 148
Query: 179 GVGLRPDKF----SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
G DK + ++ A G+ A+ +FD + E G+E + N+++D K
Sbjct: 149 G-----DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 203
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
+A + +L + + PN ++N+ I G + R E+L + MK + + V +
Sbjct: 204 KRVEQARVVLLQL--KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
Y+++I Q + +M P+ +T +++ L + EE+ + M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+SG + + + YN I L G++EEA ++ + + E ++++++TY +I C +
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 414 NKALQVLEEAEHRG-GDVDVFAYSSMINALCK 444
+KA+++L+E E + DV Y ++ + K
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 9/259 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+ + K + +EAL ++M + G RP V S+ +++ + ++ + + + +
Sbjct: 230 FIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G PN TY ++ L ++EFE+A + M G +PD Y LI+ A+ G L A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 206 LEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
VF EM E GV + YN +I + + KA E+ + + P+V +Y ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 265 RGLSRCGRFSESLEIWERMKKNERKH----DVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
R C + + +E+ + +K+ KH D TY+ LI L + + A ++++MI
Sbjct: 409 RS---CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 321 RRVSPDVVTCNAMLNGLCK 339
+ ++P TC +L + K
Sbjct: 466 QDITPRHRTCLLLLEEVKK 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P +FN ++ + + + E A G P V +Y +I+ C++ EF K +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M G P+ +Y T++++ + + AL V M G +PD + YN +I +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK-KNERKHDV 292
+G +A ++ + E V N +YN MI +++E+ + M+ N DV
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGR-RVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
TY L+ + G++ ++ K+M+ + +S D T ++ LC+ E ++ L+E
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 352 EM 353
EM
Sbjct: 462 EM 463
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKW---GKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
K+ + R +VT N + + ++ G+ EE+ +++ +G+ G +N S N+ + L
Sbjct: 141 KEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 200
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ +VE+A + LL ++ + ++ T+ I IHG CK + +AL ++E + G
Sbjct: 201 CKEKRVEQARVV--LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPC 258
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
V +Y+++I C++ ++S M+ G N+
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
++ FA + +WE A F G+ N E+ N+L+ LCK++ E+A+ +L +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-H 219
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ P+ ++ I+ K + AL EM G P V+ Y II + + +F+K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
EM + + PN ++Y ++ L+ F E+L + RMK++ K D Y+ LIH
Sbjct: 280 EMLSEMEANGSP-PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 302 LSQMGNLDGAQRVYK-DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
L++ G L+ A+RV++ +M VS + T N+M+ C + +++ EL +EM S N
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 361 --VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
V +Y ++ F+ G V E + + ++ + L++D +TY LI LC+ A
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 458
Query: 419 VLEE 422
+ EE
Sbjct: 459 LFEE 462
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 156/332 (46%), Gaps = 16/332 (4%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ LL+ F + W A + ++ G + + Y++ + +L K +++++ K + M
Sbjct: 91 HKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR 148
Query: 179 GVGLRPDKF----SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
G DK + ++ A G+ A+ +FD + E G+E + N+++D K
Sbjct: 149 G-----DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 203
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
+A + +L + + PN ++N+ I G + R E+L + MK + + V +
Sbjct: 204 KRVEQARVVLLQL--KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
Y+++I Q + +M P+ +T +++ L + EE+ + M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+SG + + + YN I L G++EEA ++ + + E ++++++TY +I C +
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 414 NKALQVLEEAEHRG-GDVDVFAYSSMINALCK 444
+KA+++L+E E + DV Y ++ + K
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 9/259 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+ + K + +EAL ++M + G RP V S+ +++ + ++ + + + +
Sbjct: 230 FIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G PN TY ++ L ++EFE+A + M G +PD Y LI+ A+ G L A
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 206 LEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
VF EM E GV + YN +I + + KA E+ + + P+V +Y ++
Sbjct: 349 ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 265 RGLSRCGRFSESLEIWERMKKNERKH----DVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
R C + + +E+ + +K+ KH D TY+ LI L + + A ++++MI
Sbjct: 409 RS---CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 321 RRVSPDVVTCNAMLNGLCK 339
+ ++P TC +L + K
Sbjct: 466 QDITPRHRTCLLLLEEVKK 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P +FN ++ + + + E A G P V +Y +I+ C++ EF K +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
L M G P+ +Y T++++ + + AL V M G +PD + YN +I +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK-KNERKHDV 292
+G +A ++ + E V N +YN MI +++E+ + M+ N DV
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGR-RVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
TY L+ + G++ ++ K+M+ + +S D T ++ LC+ E ++ L+E
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 352 EM 353
EM
Sbjct: 462 EM 463
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKW---GKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
K+ + R +VT N + + ++ G+ EE+ +++ +G+ G +N S N+ + L
Sbjct: 141 KEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 200
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ +VE+A + LL ++ + ++ T+ I IHG CK + +AL ++E + G
Sbjct: 201 CKEKRVEQARVV--LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPC 258
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
V +Y+++I C++ ++S M+ G N+
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 172/349 (49%), Gaps = 9/349 (2%)
Query: 131 QWERAEKFFAYFDTAGVSPNVET--YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
+W++ FF + + + P +ET YNV +K L R+F+ + + M G+ D +
Sbjct: 165 EWQKTHTFFNWVKSKSLFP-METIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNIT 223
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
Y T+I A + N A+E F+ M + G+ PD + Y+ I+D + KSG + ++ER +
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
P+ ++++V+ + G + + + MK + K +V Y++L+ + + G
Sbjct: 284 -ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKP 342
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLN--GLCKWGKVEESFELWEEM-GQSGSRNVISYN 365
A+ ++ +M+ ++P+ T A++ G +W + ++ +LWEEM + + I YN
Sbjct: 343 GLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAR--DALQLWEEMKAKKWPMDFILYN 400
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
+ + G EEA ++ + D+ +Y +++ G KA+++ EE
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
G V+V + ++ L K +R+DD V L KRG K + +C L+
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLL 509
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 128/298 (42%), Gaps = 1/298 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L Y+K +E L+L+ + G +P +F+ L F + ++ +
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVAT-GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM 320
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
V PNV YN L++ + + + A+ L M GL P++ + L+ K A
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDA 380
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L++++EM + D + YN +++ G +A ++ + P+ SY M+
Sbjct: 381 LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLN 440
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G+ +++E++E M K + +V + L+ L + +D V+ I R V P
Sbjct: 441 IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNI 383
D C +L+ + E++ ++ + ++ + V N+ + E V+E +
Sbjct: 501 DDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKL 558
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 196/457 (42%), Gaps = 49/457 (10%)
Query: 11 HRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAI 70
H L + L S +P +F+ A PG+T S ++ V+ + + +
Sbjct: 105 HALFDRLSS--SPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRV 162
Query: 71 EAAQNCN-CSEDVPLTLLKAYAKRSMPDEALNLF---RKMDRVFGCRPGVRSFNSLLNAF 126
+ + N S D + L++ YA+ M +A+ F R + V +R LL+A
Sbjct: 163 RSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDAL 222
Query: 127 A----VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
V E E+ D+ V P+V +N+L+ + R+ ++A+ L M + +
Sbjct: 223 CKEGHVREASMYLERIGGTMDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNV 281
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+P +YGTLI + + A+EV +EM +E + M +N IID
Sbjct: 282 KPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID------------- 328
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
GL GR SE+L + ER E + TY+SL+
Sbjct: 329 -----------------------GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNV 361
+ G+L GA ++ K M+ R V P T N K K EE L+ ++ ++G S +
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 362 ISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
++Y++ +K L E+GK+ AM + + + + D T +LIH LC+ L +A + +
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEM-KNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFD 484
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
A RG + + N L + D A + SLM
Sbjct: 485 NAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 155/305 (50%), Gaps = 7/305 (2%)
Query: 191 TLINAAAKRGDLNAA---LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
L++A K G + A LE + P V +N++++G+F+S +A ++WE +
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+ V P VV+Y +I G R R ++E+ E MK E + + ++ +I GL + G
Sbjct: 277 -KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNI 366
L A + + P +VT N+++ CK G + + ++ + M G +YN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
F K ++ K EE MN++ L+ E + D TY +++ LC++G L+ A+QV +E ++R
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLI-EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLL 486
G D D+ + +I+ LC+ L++A +RG + ++ +ID +++ ++ +
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI-IPQYITFKMIDNGLRSKGMSDM 513
Query: 487 FKSLG 491
K L
Sbjct: 514 AKRLS 518
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 26/289 (8%)
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
+ E G+EP V + + D S L + W + T+ P++ ++ ++ L +
Sbjct: 92 LDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSL--FDSVVNSLCKAR 149
Query: 272 RFSESLE-IWERMKKNERKHDVF--TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP--- 325
F + +++R++ +E + V T+ LI ++ G + A R ++ R P
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCK 207
Query: 326 ---DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS----YNIFIKGLFENGKVE 378
++ +L+ LCK G V E+ E +G + N + +NI + G F + K++
Sbjct: 208 SATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLK 267
Query: 379 EAMNIWELLLGETALAVDST--TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+A +WE + A+ V T TYG LI G C+ + A++VLEE + +++ ++
Sbjct: 268 QAEKLWEEM---KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 437 SMINALCKERRLDDAAGVVS--LMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+I+ L + RL +A G++ + + G + T+ N L+ F K +L
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY--NSLVKNFCKAGDL 371
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC+P ++N L++++ + A F AG P+ TY LI + K + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + M GL PD F+Y +IN K G L AA ++F EM ++G P+++ YN+++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K+ ++ A +++ R ++ P+ V+Y++++ L CG E+ ++ M++
Sbjct: 514 HAKARNYQNALKLY-RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D Y L+ + GN++ A + Y+ M+ + P+V TCN++L+ + K+ E++EL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ M G R + + +G+ + M L+ T
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 8/316 (2%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL F + R G + ++ +++ ++Q+ K G PN TYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
+ +A + M G +PD+ +Y TLI+ AK G L+ A++++ M G+
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD Y++II+ K+G A++++ ++ ++ PN+V+YN+M+ ++ + +L+
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ M+ + D TYS ++ L G L+ A+ V+ +M + PD +++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K G VE++++ ++ M +G R NV + N + K+ EA +ELL AL +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA---YELLQNMLALGLRP 642
Query: 398 T--TYGILIHGLCKNG 411
+ TY +L+ C +G
Sbjct: 643 SLQTYTLLL-SCCTDG 657
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 39/323 (12%)
Query: 159 KVLCKKREFEKAKGLLRWMS-GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+VL + ++ A G W+ G + D +Y T++ + A ++ DEM G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+P+ + YN +I + ++ +A ++ ++ +E P+ V+Y +I ++ G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++++RM+ D FTYS +I+ L + G+L A +++ +M+ + +P++VT N M++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 338 CKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K + + +L+ +M +G + ++Y+I ++ L G +EEA ++ + + + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-D 573
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
YG+L+ K G + KA Q Y +M++A
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQ---------------WYQAMLHA--------------- 603
Query: 457 LMDKRGCKLNTHVCNPLIDGFIK 479
G + N CN L+ F++
Sbjct: 604 -----GLRPNVPTCNSLLSTFLR 621
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 74 QNCNCSED--VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q C D TL+ +AK D A++++++M + G P +++ ++N +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
A K F G +PN+ TYN+++ + K R ++ A L R M G PDK +Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ G L A VF EM ++ PD Y +++D + K+G+ KA + W + +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAMLHA 603
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+ PNV + N ++ R + +E+ E+ + M + + TY+ L+ + DG
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT-----DGR 658
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES--------FELWEEMGQSGSRNVIS 363
++ G+ ++ + L + G E+ +L + R ++
Sbjct: 659 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV- 717
Query: 364 YNIFIKGLFENGKVEEAMNIWEL 386
+ + L ++G+ EEA ++WE+
Sbjct: 718 -DAVVDFLHKSGQKEEAGSVWEV 739
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D T M+ L + + +L +EM + G + N ++YN I + EAMN++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ E D TY LI K G+L+ A+ + + + G D F YS +IN L K
Sbjct: 423 NQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
L A + M +GC N N ++D K N
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC+P ++N L++++ + A F AG P+ TY LI + K + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + M GL PD F+Y +IN K G L AA ++F EM ++G P+++ YN+++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K+ ++ A +++ R ++ P+ V+Y++++ L CG E+ ++ M++
Sbjct: 514 HAKARNYQNALKLY-RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D Y L+ + GN++ A + Y+ M+ + P+V TCN++L+ + K+ E++EL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ M G R + + +G+ + M L+ T
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 8/316 (2%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL F + R G + ++ +++ ++Q+ K G PN TYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
+ +A + M G +PD+ +Y TLI+ AK G L+ A++++ M G+
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD Y++II+ K+G A++++ ++ ++ PN+V+YN+M+ ++ + +L+
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ M+ + D TYS ++ L G L+ A+ V+ +M + PD +++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K G VE++++ ++ M +G R NV + N + K+ EA +ELL AL +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA---YELLQNMLALGLRP 642
Query: 398 T--TYGILIHGLCKNG 411
+ TY +L+ C +G
Sbjct: 643 SLQTYTLLL-SCCTDG 657
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 39/323 (12%)
Query: 159 KVLCKKREFEKAKGLLRWMS-GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+VL + ++ A G W+ G + D +Y T++ + A ++ DEM G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+P+ + YN +I + ++ +A ++ ++ +E P+ V+Y +I ++ G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++++RM+ D FTYS +I+ L + G+L A +++ +M+ + +P++VT N M++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 338 CKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K + + +L+ +M +G + ++Y+I ++ L G +EEA ++ + + + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-D 573
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
YG+L+ K G + KA Q Y +M++A
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQW---------------YQAMLHA--------------- 603
Query: 457 LMDKRGCKLNTHVCNPLIDGFIK 479
G + N CN L+ F++
Sbjct: 604 -----GLRPNVPTCNSLLSTFLR 621
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 74 QNCNCSED--VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q C D TL+ +AK D A++++++M + G P +++ ++N +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
A K F G +PN+ TYN+++ + K R ++ A L R M G PDK +Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ G L A VF EM ++ PD Y +++D + K+G+ KA + W + +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAMLHA 603
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+ PNV + N ++ R + +E+ E+ + M + + TY+ L+ + DG
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT-----DGR 658
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES--------FELWEEMGQSGSRNVIS 363
++ G+ ++ + L + G E+ +L + R ++
Sbjct: 659 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV- 717
Query: 364 YNIFIKGLFENGKVEEAMNIWEL 386
+ + L ++G+ EEA ++WE+
Sbjct: 718 -DAVVDFLHKSGQKEEAGSVWEV 739
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D T M+ L + + +L +EM + G + N ++YN I + EAMN++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ E D TY LI K G+L+ A+ + + + G D F YS +IN L K
Sbjct: 423 NQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
L A + M +GC N N ++D K N
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC+P ++N L++++ + A F AG P+ TY LI + K + A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + M GL PD F+Y +IN K G L AA ++F EM ++G P+++ YN+++D
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K+ ++ A +++ R ++ P+ V+Y++++ L CG E+ ++ M++
Sbjct: 514 HAKARNYQNALKLY-RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D Y L+ + GN++ A + Y+ M+ + P+V TCN++L+ + K+ E++EL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ M G R + + +G+ + M L+ T
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 8/316 (2%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL F + R G + ++ +++ ++Q+ K G PN TYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
+ +A + M G +PD+ +Y TLI+ AK G L+ A++++ M G+
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD Y++II+ K+G A++++ ++ ++ PN+V+YN+M+ ++ + +L+
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ M+ + D TYS ++ L G L+ A+ V+ +M + PD +++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K G VE++++ ++ M +G R NV + N + K+ EA +ELL AL +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA---YELLQNMLALGLRP 642
Query: 398 T--TYGILIHGLCKNG 411
+ TY +L+ C +G
Sbjct: 643 SLQTYTLLL-SCCTDG 657
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 39/323 (12%)
Query: 159 KVLCKKREFEKAKGLLRWMS-GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+VL + ++ A G W+ G + D +Y T++ + A ++ DEM G
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+P+ + YN +I + ++ +A ++ ++ +E P+ V+Y +I ++ G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
++++RM+ D FTYS +I+ L + G+L A +++ +M+ + +P++VT N M++
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 338 CKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K + + +L+ +M +G + ++Y+I ++ L G +EEA ++ + + + D
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-D 573
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
YG+L+ K G + KA Q Y +M++A
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQW---------------YQAMLHA--------------- 603
Query: 457 LMDKRGCKLNTHVCNPLIDGFIK 479
G + N CN L+ F++
Sbjct: 604 -----GLRPNVPTCNSLLSTFLR 621
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 74 QNCNCSED--VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q C D TL+ +AK D A++++++M + G P +++ ++N +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
A K F G +PN+ TYN+++ + K R ++ A L R M G PDK +Y
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ G L A VF EM ++ PD Y +++D + K+G+ KA + W + +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ-WYQAMLHA 603
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+ PNV + N ++ R + +E+ E+ + M + + TY+ L+ + DG
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT-----DGR 658
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES--------FELWEEMGQSGSRNVIS 363
++ G+ ++ + L + G E+ +L + R ++
Sbjct: 659 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLV- 717
Query: 364 YNIFIKGLFENGKVEEAMNIWEL 386
+ + L ++G+ EEA ++WE+
Sbjct: 718 -DAVVDFLHKSGQKEEAGSVWEV 739
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D T M+ L + + +L +EM + G + N ++YN I + EAMN++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ E D TY LI K G+L+ A+ + + + G D F YS +IN L K
Sbjct: 423 NQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
L A + M +GC N N ++D K N
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 201/448 (44%), Gaps = 50/448 (11%)
Query: 28 QLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCN---CSEDVPL 84
+ F AT+ PGY HS V + ++ ++ + + G IE + N ++ +
Sbjct: 116 RFFLWATKQPGYFHSYEVCKSMVMILSK----MRQFGAVWGLIEEMRKTNPELIEPELFV 171
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L++ +A +M +A+ + +M + +G P F LL+A + + A K F
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
PN+ + L+ C++ + +AK +L M GL PD + L++ A G +
Sbjct: 231 K-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++ ++M +RG EP+V CY ++I L R E
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQA----------------LCRTEK------------ 321
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R E++ ++ M++ + D+ TY++LI G + G +D V DM + V
Sbjct: 322 -------RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P VT ++ K + EE EL E+M + G +++ YN+ I+ + G+V+EA+ +
Sbjct: 375 PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG--GDVDVFAYSSMINA 441
W + L+ T+ I+I+G G+L +A +E RG S++N
Sbjct: 435 WNEMEA-NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNN 493
Query: 442 LCKERRLDDAAGVVSLMDKR--GCKLNT 467
L ++ +L+ A V S + + C+LN
Sbjct: 494 LVRDDKLEMAKDVWSCISNKTSSCELNV 521
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD---TAGVSPNVET 153
DEA+ +F +M+R +GC + ++ +L++ F +W +K ++ D GV P+ T
Sbjct: 324 DEAMRVFVEMER-YGCEADIVTYTALISGFC---KWGMIDKGYSVLDDMRKKGVMPSQVT 379
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
Y ++ KK +FE+ L+ M G PD Y +I A K G++ A+ +++EM
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKA-NEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
G+ P V + ++I+GF G ++A N E + R P + ++ L R +
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK 499
Query: 273 FSESLEIWERM--KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
+ ++W + K + + +V ++ IH L G++ A DM+ + P T
Sbjct: 500 LEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIK 369
++ GL K + E+ E++ + S +S+ ++ K
Sbjct: 560 AKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMYKK 598
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 187/417 (44%), Gaps = 42/417 (10%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL +F ++ P R ++L Q A + F + V V+ YN ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMM 232
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL--NAALEVFDEMSERG 216
V + +F KA+ L+ M G PD S+ TLINA K G L N A+E+ D + G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292
Query: 217 VEPDVMCYNMI---------IDGFFKSGDFLKAN----EMW------------------E 245
+ PD + YN + +DG K + ++A+ ++W E
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 246 RLLRE---ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
RL E + FP+ V+YN ++ +R + E++++M+K D TY+++IH
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 303 SQMGNLDGAQRVYKDMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV 361
+ G LD A ++YKDM G +PD +T +++ L K + E+ L EM G +
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 362 I-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ +Y+ I G + GK EEA + + +L + D+ Y +++ L + KA +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCML-RSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT-HVCNPLIDG 476
+ G Y MI L KE R DD + M++ C +N + + L+ G
Sbjct: 532 RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL-CGMNPLEISSVLVKG 587
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 13/347 (3%)
Query: 70 IEAAQNCNCSEDVPL--TLLKAYAKRS--MPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
++A + C D+ TL+ A K P+ A+ L M R G RP ++N+LL+A
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSGLRPDAITYNTLLSA 306
Query: 126 FAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
+ + A K F + P++ TYN +I V + +A+ L + G PD
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPD 366
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+Y +L+ A A+ + EV+ +M + G D M YN II + K G A ++++
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+ P+ ++Y V+I L + R E+ + M K + TYS+LI G ++
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISY 364
G + A+ + M+ PD + + ML+ L + + +++ L+ +M G + + Y
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Query: 365 NIFIKGLFENGK---VEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ I GL + + +++ + E L G L + S +L+ G C
Sbjct: 547 ELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISS----VLVKGEC 589
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 191/479 (39%), Gaps = 104/479 (21%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TLL A ++ S D A+ +F M+ C+P + ++N++++ + AE+ F +
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDME-AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+ TYN L+ ++R EK K + + M +G D+ +Y T+I+ K+G L+
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 205 ALEVFDEMSE-RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
AL+++ +M G PD + Y ++ID K+ ++A + +L + + P + +Y+ +
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML-DVGIKPTLQTYSAL 479
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL------------------------- 298
I G ++ G+ E+ + + M ++ K D YS +
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 299 ----------IHGLSQMGNLDGAQRVYKDM-----------------------IGRRVSP 325
I GL + D Q+ +DM R++
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599
Query: 326 DVV--------TCNAMLNGLCKWGKVEESFELWEEMGQ--SGSRNVISYNIFIKGLFENG 375
+ T ++L G+ E+FEL E + + SGS+ +I+
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLIT------------ 647
Query: 376 KVEEAMNIWELLLGETALAVD---------------STTYGILIHGLCKNGYLNKALQVL 420
EA+ + + + A+D ST Y L+H N + +A QV
Sbjct: 648 ---EALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVF 704
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ G + SM+ CK + A VV+ + +G C+P+ I+
Sbjct: 705 SDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF---ACSPMYTDIIE 760
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 186/411 (45%), Gaps = 9/411 (2%)
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRV---FGCRPGVRSFNSLLNAFAVSEQW 132
C SE V +++ Y K P+ A + + + F C P + ++ A+ + W
Sbjct: 712 CEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLW 768
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
++AE +G +P+++T+N L+ + +E+A+ + M G P S L
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
++A G L V +E+ + G + +++D F ++G+ + +++ ++
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS-MKAAG 887
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
P + Y +MI L + R ++ + M++ K ++ ++S++ + + +
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
+VY+ + + PD T N ++ C+ + EE + L ++M G + +Y I
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ +E+A ++E LL + L +D + Y ++ +G +KA ++L+ ++ G +
Sbjct: 1008 GKQKCLEQAEQLFEELLSK-GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPT 1066
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+ ++ + +A V+S + +L T + +ID ++++ +
Sbjct: 1067 LATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 183/377 (48%), Gaps = 6/377 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+++AY K+ + +A ++ + R G P ++++NSL++A+A +ERA F
Sbjct: 758 IIEAYGKQKLWQKAESVVGNL-RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G SP VE+ N+L+ LC E+ ++ + +G + K S +++A A+ G++
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+++ M G P + Y M+I+ K G ++ E+ + E + +N M++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCK-GKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ + +++++++R+K+ + D TY++LI + + + + M + P
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS-YNIFIKGLFENGKVEEAMNIW 384
+ T ++++ K +E++ +L+EE+ G + S Y+ +K ++G +A +
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLL 1055
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ ++ + T +L+ +G +A +VL + ++ YSS+I+A +
Sbjct: 1056 Q-MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 445 ERRLDDAAGVVSLMDKR 461
+ D +G+ L++ +
Sbjct: 1115 SK--DYNSGIERLLEMK 1129
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+NS+L + E +++ + + G+ P+ TYN LI + C+ R E+ L++ M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
+GL P +Y +LI+A K+ L A ++F+E+ +G++ D Y+ ++ SG
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
KA ++ + +++ + P + + ++++ S G E+ ++ +K E + YSS+
Sbjct: 1050 KAEKLLQ-MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPD--VVTC 330
I + + + +M + PD + TC
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTC 1142
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 18/261 (6%)
Query: 241 NEMWERLLREETVF----------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
E W+R L VF PN ++ L R + S ++EI+ R +
Sbjct: 168 QESWQRALE---VFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR 224
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF--E 348
V Y++++ S+ G AQ + M R PD+++ N ++N K G + + E
Sbjct: 225 -VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
L + + SG R + I+YN + + ++ A+ ++E + D TY +I
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-QPDLWTYNAMISVY 342
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
+ G +A ++ E E +G D Y+S++ A +ER + V M K G +
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 468 HVCNPLIDGFIKNSNLTLLFK 488
N +I + K L L +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQ 423
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 35/452 (7%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
K +S RL +LL+ E +P +A++LF++ P T+ ++ +LL +
Sbjct: 5 KSVSSFRLASLLRRENDPSAAMKLFRNP--DPESTNPKRPFRY---------SLLCY--- 50
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
D+ +T L D+ L + R+ P F +++N
Sbjct: 51 ---------------DIIITKLGGSKMFDELDQVLLHLKTDTRIV---PTEIIFCNVINF 92
Query: 126 FAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
F + RA F V++ N L+ L K E EK K L + G +PD
Sbjct: 93 FGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPD 151
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+Y LI+ ++ G + AL++FDEM ++ V+P + + +I G K +A +M
Sbjct: 152 ACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKH 211
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+L+ V P V Y +I+ L + G S + ++ + + + K D YS+LI L +
Sbjct: 212 DMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA 271
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISY 364
G + + ++M + PD VT N ++NG C E + + +EM + G + +VISY
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
N+ + F K EEA ++E + + D+ +Y I+ GLC+ +A +L+E
Sbjct: 332 NMILGVFFRIKKWEEATYLFE-DMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
+G + LC+ +L+ + V+S
Sbjct: 391 FKGYKPRRDRLEGFLQKLCESGKLEILSKVIS 422
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 161/328 (49%), Gaps = 8/328 (2%)
Query: 154 YNVLIKVLCKKREFEKA-KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA-ALEVFDE 211
Y+++I L + F++ + LL + + P + + +IN RG L + AL +FDE
Sbjct: 50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFG-RGKLPSRALHMFDE 108
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
M + + V N ++ K G+ K E + +E P+ +YN++I G S+ G
Sbjct: 109 MPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSI--DEFGKPDACTYNILIHGCSQSG 166
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVVTC 330
F ++L++++ M K + K T+ +LIHGL + + A ++ DM+ V P V
Sbjct: 167 CFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIY 226
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLG 389
+++ LC+ G++ +F+L +E + + + Y+ I L + G+ E I E +
Sbjct: 227 ASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM-S 285
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
E D+ TY +LI+G C A +VL+E +G DV +Y+ ++ + ++ +
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 450 DAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+A + M +RGC +T + DG
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 2/265 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ K S EAL + M +V+G RP V + SL+ A + A K
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ + Y+ LI L K + +L MS G +PD +Y LIN D +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A V DEM E+G++PDV+ YNMI+ FF+ + +A ++E + R P+ +SY ++
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR-RGCSPDTLSYRIVF 370
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
GL +F E+ I + M K + L + G L+ +V + R ++
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIA 429
Query: 325 PDVVTCNAMLNGLCKWGKVEESFEL 349
D + M+ +CK + +S +L
Sbjct: 430 GDADVWSVMIPTMCKEPVISDSIDL 454
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 43/324 (13%)
Query: 198 KRGDLNAALEVFDEMSERGVEP------DVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+ D +AA+++F P ++CY++II S F + +++ L +
Sbjct: 18 RENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDT 77
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERM--------------------------KK 285
+ P + + +I R S +L +++ M K
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 286 NER--------KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
ER K D TY+ LIHG SQ G D A +++ +M+ ++V P VT +++GL
Sbjct: 138 KERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 338 CKWGKVEESFELWEEMGQS-GSRNVIS-YNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
CK +V+E+ ++ +M + G R + Y IK L + G++ A + + E + V
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY-EGKIKV 256
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D+ Y LI L K G N+ +LEE +G D Y+ +IN C E + A V+
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIK 479
M ++G K + N ++ F +
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFR 340
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 5/275 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ AY K + +E LF +M R G +P ++N L++A+A Q + E +
Sbjct: 384 TLMDAYNKSNHIEEVEGLFTEM-RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 145 AGVSPNVETYNVLIKVLCKKREFEK--AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
G+ PNV++Y LI + ++ A LR M VGL+P SY LI+A + G
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
A F+EM + G++P V Y ++D F +SGD K E+W+ +LRE+ + ++YN
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK-IKGTRITYNT 560
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ G ++ G + E+ ++ K + V TY+ L++ ++ G ++ K+M
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+ PD +T + M+ + + +F + M +SG
Sbjct: 621 LKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 168/378 (44%), Gaps = 24/378 (6%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAF-----AVSEQWERAEKFFAYFDTAGVSPNV 151
D+A ++ MD++ P + L+ + E WE EK GV +
Sbjct: 290 DDAWEVYEAMDKI-NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM----SEKGVKWSQ 344
Query: 152 ETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
+ + L+K C + E+A + M G+R + Y TL++A K + +F E
Sbjct: 345 DVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTE 404
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET---VFPNVVSYNVMIRGLS 268
M ++G++P YN+++D + + ++ E LLRE + PNV SY +I
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQ----PDIVETLLREMEDLGLEPNVKSYTCLISAYG 460
Query: 269 RCGRFSE-SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
R + S+ + + + RMKK K +Y++LIH S G + A +++M + P V
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQS---GSRNVISYNIFIKGLFENGKVEEAMNIW 384
T ++L+ + G + E+W+ M + G+R I+YN + G + G EA ++
Sbjct: 521 ETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR--ITYNTLLDGFAKQGLYIEARDVV 578
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ L TY +L++ + G K Q+L+E D YS+MI A +
Sbjct: 579 SEF-SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Query: 445 ERRLDDAAGVVSLMDKRG 462
R A +M K G
Sbjct: 638 VRDFKRAFFYHKMMVKSG 655
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 154/332 (46%), Gaps = 5/332 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK-REFEKAKGLL 174
VR +N+ ++ + S++++ A + + D V P+ T +LI L K R ++ +
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
MS G++ + +G L+ + G AL + EM ++G+ + + YN ++D + KS
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
+ ++ + R++ + P+ +YN+++ +R + + M+ + +V +
Sbjct: 393 NHIEEVEGLFTEM-RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 295 YSSLIHGLSQMGNL-DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
Y+ LI + + D A + M + P + A+++ G E+++ +EEM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 354 GQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ G + +V +Y + +G + M IW+L+L E + TY L+ G K G
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE-KIKGTRITYNTLLDGFAKQGL 570
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+A V+ E G V Y+ ++NA +
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 86 LLKAYAK-RSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ AY + + M D A + F +M +V G +P S+ +L++A++VS E+A F
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKV-GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+VETY ++ + + K + + M ++ + +Y TL++ AK+G
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF---PNVVSYN 261
A +V E S+ G++P VM YNM+++ + + G K + LL+E P+ ++Y+
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ----LLKEMAALNLKPDSITYS 629
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
MI R F + + M K+ + D +Y L
Sbjct: 630 TMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 11/298 (3%)
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL- 247
Y I+ + + A EV++ M + V PD + ++I K+G A E+WE
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR--SAKEVWEIFE 333
Query: 248 -LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
+ E+ V + + +++ G E+L I M+K + + Y++L+ ++
Sbjct: 334 KMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYN 365
+++ + ++ +M + + P T N +++ + + + L EM G NV SY
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I K+ + L + + L S +Y LIH +G+ KA EE
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVS---LMDKRGCKLNTHVCNPLIDGFIKN 480
G V Y+S+++A RR D ++ LM + K N L+DGF K
Sbjct: 514 EGIKPSVETYTSVLDAF---RRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 104/271 (38%), Gaps = 46/271 (16%)
Query: 214 ERGVEPDVMCYNMII----DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
ER V D C ++ GF KS + W L P S + G R
Sbjct: 197 ERRVS-DTECVEALVMMGESGFVKSCLYFYE---WMSLQEPSLASPRACSVLFTLLGRER 252
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
+ L + + E DV Y++ I GLS D A VY+ M V PD VT
Sbjct: 253 MADYI--LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVT 310
Query: 330 CNAMLNGLCKWGK-VEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
C ++ L K G+ +E +E++E+M + G + W
Sbjct: 311 CAILITTLRKAGRSAKEVWEIFEKMSEKGVK------------------------W---- 342
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
+G L+ C G +AL + E E +G + Y+++++A K +
Sbjct: 343 -------SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 449 DDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++ G+ + M +G K + N L+D + +
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 216/486 (44%), Gaps = 75/486 (15%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
S +L+N+L PH A +F+ L P+L+ + +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFK-----------------TLAETGHRPSLISYTTLLAA 89
Query: 69 AIEAAQNCNCSEDVPLTLLKAYAK-RSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA 127
+T+ K Y S+ E K+D +F FN+++NAF+
Sbjct: 90 ---------------MTVQKQYGSISSIVSEVEQSGTKLDSIF--------FNAVINAFS 126
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRP 184
S E A + G++P TYN LIK + E++ LL M V + P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA-NEM 243
+ ++ L+ A K+ + A EV +M E GV PD + YN I + + G+ ++A +E+
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
E+++ +E PN + +++ G R GR + L RMK+ + ++ ++SLI+G
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 304 QMGNLDGAQRVY-----------KDMIGRR--------------VSPDVVTCNAMLNGLC 338
++ + DG V +++G + V DV+T + ++N
Sbjct: 307 EVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWS 366
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
G +E++ ++++EM ++G + + +Y+I KG + ++A + E L+ E+ V
Sbjct: 367 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV-- 424
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
+ +I G C NG ++ A++V + G ++ + +++ + ++ A V+ +
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 458 MDKRGC 463
M RGC
Sbjct: 485 M--RGC 488
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 177/401 (44%), Gaps = 31/401 (7%)
Query: 112 CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
CR VRS L+N + A+ F G P++ +Y L+ + ++++
Sbjct: 42 CRT-VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS 100
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
++ + G + D + +INA ++ G++ A++ +M E G+ P YN +I G+
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 232 FKSGDFLKANEMWERLLREET--VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+G +++E+ + +L E V PN+ ++NV+++ + + E+ E+ ++M++ +
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQR--VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
D TY+++ Q G A+ V K ++ + P+ TC ++ G C+ G+V +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 348 ELWEEMGQ-SGSRNVISYNIFIKGLFE-------------------NGKVE----EAMNI 383
M + N++ +N I G E N +VE + M +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV 340
Query: 384 WEL-LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
L L+ E + D TY +++ GY+ KA QV +E G D AYS +
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ + A ++ + + N + +I G+ N ++
Sbjct: 401 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSM 440
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
+L M ++ D +Y T++NA + G + A +VF EM + GV+PD Y+++ G+
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 233 KSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
++ + KA E+ E L+ E PNVV + +I G G +++ ++ +M K ++
Sbjct: 402 RAKEPKKAEELLETLIVESR--PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
T+ +L+ G ++ A+ V + M G V P+
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 493
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 86/466 (18%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA---------E 136
++KA ++ +EA L + + VFG + + +N V+ + E+A
Sbjct: 222 VVKALCRKGNLEEAAMLLIENESVFG-------YKTFINGLCVTGETEKAVALILELIDR 274
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
K+ A D V ++++ C + + + A+ ++ M +G D ++ +I+
Sbjct: 275 KYLAGDDLRAV------LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRY 328
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
K +L AL D+M +G++ + + ++I+ + K L+A E ++ R+ +F +
Sbjct: 329 CKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF-RDMNIFLD 387
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
V YNV LS+ GR E+ E+ + MK DV Y++LI G G + A +
Sbjct: 388 RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENG 375
+MIG +SPD++T N +++GL + G EE E++E M G + N ++ ++ I+GL
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 376 KVEEAMNIWELL--------------LGETALA-------------VDSTTYGILIHGLC 408
KV+EA + + L E L+ + + Y L LC
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 409 KNGYLNKALQVLE----------------------------EAE-------HRGGDVDVF 433
GYL KA VL+ EA+ RG D+F
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 627
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
Y+ MI+ C+ L A + M +RG K + L+D ++K
Sbjct: 628 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 189/444 (42%), Gaps = 45/444 (10%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
L ++ Y K EAL KM G + + +L + + A + F F
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGK-GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFR 380
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ + YNV L K E+A LL+ M G+ PD +Y TLI+ +G +
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVV 440
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
AL++ DEM G+ PD++ YN+++ G ++G + E++ER+ + E PN V+ +V+
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM-KAEGPKPNAVTNSVI 499
Query: 264 IRGLSRCGRFSESLEIWERMKK------------------NERKHDVFT----------Y 295
I GL + E+ + + +++ +++ + F Y
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVY 559
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
L L G L+ A V K M RV P C M+ CK V E+ L++ M +
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619
Query: 356 SG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI---------- 404
G ++ +Y I I ++++A +++E + + + D TY +L+
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM-KQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 405 HGLCK-NGYLNK--ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
H C G + K A +VL E G +DV Y+ +I+ CK L+ AA + M
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 462 GCKLNTHVCNPLIDGFIKNSNLTL 485
G + + LI + + + +
Sbjct: 739 GLEPDMVAYTTLISSYFRKGYIDM 762
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 176/445 (39%), Gaps = 99/445 (22%)
Query: 86 LLKAYAKRSMPDEALNLFRK-------MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
+L+ Y K M EAL F++ +DRV +N +A + + E A +
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRV--------CYNVAFDALSKLGRVEEAFEL 410
Query: 139 FAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAK 198
G+ P+V Y LI C + + A L+ M G G+ PD +Y L++ A+
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDG------------FFKS---------GDF 237
G LE+++ M G +P+ + ++II+G FF S F
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF 530
Query: 238 LK-------ANEMWERLLREE-------------------------TVFPNVVSYNV--- 262
+K + + ++ +R E V + +Y V
Sbjct: 531 VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPG 590
Query: 263 ------MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
MI + E+ +++ M + D+FTY+ +IH ++ L A+ +++
Sbjct: 591 RSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFE 650
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGK 376
DM R + PDVVT +L+ K E E G+ G R K
Sbjct: 651 DMKQRGIKPDVVTYTVLLDRYLKLDP--EHHETCSVQGEVGKR----------------K 692
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
E + + + +D Y +LI CK L +A ++ + G + D+ AY+
Sbjct: 693 ASEVLREF----SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Query: 437 SMINALCKERRLDDAAGVVSLMDKR 461
++I++ ++ +D A +V+ + K+
Sbjct: 749 TLISSYFRKGYIDMAVTLVTELSKK 773
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 28/306 (9%)
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE----T 252
+ R D N AL ++ E GV P+V Y ++ G +K + + L++ E T
Sbjct: 65 STRDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFT 124
Query: 253 V-----------------FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
V F + +++ G F E+ ++ + K+ + D+
Sbjct: 125 VMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKAC 184
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ L++ +++ G + ++K + + + T ++ LC+ G +EE+ L E
Sbjct: 185 NFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE--- 241
Query: 356 SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS--TTYGILIHGLCKNGYL 413
+ +V Y FI GL G+ E+A+ + L+ LA D G+++ G C +
Sbjct: 242 --NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKM 299
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
A V+ E E G +DV+A ++I+ CK L +A G + M +G K+N + + +
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 474 IDGFIK 479
+ + K
Sbjct: 360 LQCYCK 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 18/240 (7%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+ +K Y + + +A F +++ + R V + L + + E+A
Sbjct: 529 SFVKGYCEAGLSKKAYKAFVRLE--YPLRKSV--YIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V P +I CK +A+ L M GL PD F+Y +I+ + +L
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFK-----------SGDF--LKANEMWERLLREE 251
A +F++M +RG++PDV+ Y +++D + K G+ KA+E+ R
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL-REFSAA 703
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+ +VV Y V+I + ++ E+++RM + + D+ Y++LI + G +D A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 163/410 (39%), Gaps = 71/410 (17%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCK---------------KREFEKAKGLLRWMSG 179
A F GVSPNV Y L+++L K E E+ ++ +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNE-ERGFTVMDLIEV 131
Query: 180 VGLRPD--KFSY------GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
+G + + K S+ G L+ A G + A +V + D+ N +++
Sbjct: 132 IGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRM 191
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
+ G ++++ L++ + N +Y ++++ L R G E+ + + +NE
Sbjct: 192 TEFGKIGMLMTLFKQ-LKQLGLCANEYTYAIVVKALCRKGNLEEAAML---LIENE---S 244
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR----------------------------- 322
VF Y + I+GL G + A + ++I R+
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAES 304
Query: 323 ---------VSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLF 372
DV C A+++ CK + E+ ++M G+ N + ++ ++
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
+ EA+ ++ + + +D Y + L K G + +A ++L+E + RG DV
Sbjct: 365 KMDMCLEALEKFK-EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
Y+++I+ C + ++ DA ++ M G + N L+ G +N +
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 192/442 (43%), Gaps = 48/442 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+ Y K ++A NLF +M + G +FN++++ AE +
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+SP+ +TYN+L+ + + E A R + VGL PD ++ +++ +R +
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL----------------- 247
V EM + D +I+ + G ++A ++ER
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV 488
Query: 248 -------LREETVF----------PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ ETVF +V+ YNVMI+ + ++L +++ MK
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D TY+SL L+ + +D AQR+ +M+ P T AM+ + G + ++ +L+
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
E M ++G + N + Y I G E+G VEEA+ + ++ E + + LI K
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSK 667
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
G L +A +V ++ + G DV A +SM++ + +A + + + ++G
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG------T 721
Query: 470 CNPLIDGFIKNSNLTLLFKSLG 491
C+ I + + L+K +G
Sbjct: 722 CD-----VISFATMMYLYKGMG 738
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 177/350 (50%), Gaps = 3/350 (0%)
Query: 75 NCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
+C S ++ YA++ + EA +F + G R V +N ++ A+ ++ E+
Sbjct: 474 DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A F G P+ TYN L ++L ++A+ +L M G +P +Y +I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
+ + G L+ A+++++ M + GV+P+ + Y +I+GF +SG +A + + R++ E V
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMMEEHGVQ 652
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
N + +I+ S+ G E+ ++++MK +E DV +S++ + +G + A+ +
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
+ + + + + DV++ M+ G ++E+ E+ EEM +SG + S+N +
Sbjct: 713 F-NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
+G++ E ++ +L E L +D T+ L L K G ++A+ L+ A
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA 821
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 18/357 (5%)
Query: 133 ERAEKFFAYFDTAGVSPNV-ETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
E++ F + D++ P + T+N LI + K A L M G+ D ++ T
Sbjct: 286 EKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNT 345
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+I+ G L+ A + +M E+G+ PD YN+++ +GD A E + R +R+
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY-RKIRKV 404
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+FP+ V++ ++ L + +E + M +N + D + ++ G + A
Sbjct: 405 GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQA 464
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCK-------WGKVEESFELWEEMGQSGSRN-VIS 363
+ +++ R D V + L + W + E F + + SG RN V+
Sbjct: 465 KALFE-----RFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVF--YGKRNMSGQRNDVLE 517
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
YN+ IK + E+A+++++ + + D TY L L +++A ++L E
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWP-DECTYNSLFQMLAGVDLVDEAQRILAEM 576
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
G Y++MI + + L DA + M+K G K N V LI+GF ++
Sbjct: 577 LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 158/367 (43%), Gaps = 30/367 (8%)
Query: 131 QWERAEKFFAYFDT-AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+WER + F +F + PNV YN++++ L + ++++ + M+ G+ P +Y
Sbjct: 124 RWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTY 183
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
G L++ K G + AL M +R PD + ++ F SG+F +A+ ++
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC- 242
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH-GLSQMGNL 308
G+ L+ + KN + L ++G
Sbjct: 243 --------------------AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR 282
Query: 309 DGAQRVYKDMIGRRVSPD----VVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVIS 363
+ ++ G SP T N +++ K G++ ++ L+ EM +SG + ++
Sbjct: 283 NPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVT 342
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
+N I +G + EA ++ + + E ++ D+ TY IL+ G + AL+ +
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLK-KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
G D + ++++ LC+ + + + V++ MD+ +++ H P+I N L
Sbjct: 402 RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV-PVIMQMYVNEGL 460
Query: 484 TLLFKSL 490
+ K+L
Sbjct: 461 VVQAKAL 467
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 130/326 (39%), Gaps = 68/326 (20%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ +Y + + +A++L+ M++ G +P + SL+N FA S E A ++F +
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 146 GVSPNVETYNVLIKVLCK-------KREFEKAK------------GLLRWMSGVGLRP-- 184
GV N LIK K +R ++K K +L + +G+
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 185 -------------DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
D S+ T++ G L+ A+EV +EM E G+ D +N ++ +
Sbjct: 710 ESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 232 FKSGDFLKANEMWERLLRE------------------------ETVFPNVVSYN------ 261
G + E++ +L E E V +YN
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLA 829
Query: 262 ---VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+ S G ++ +LE + + E + F Y+++I+ S G++D A + Y M
Sbjct: 830 TPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRM 889
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVE 344
+ + PD+VT ++ K G VE
Sbjct: 890 QEKGLEPDIVTQAYLVGIYGKAGMVE 915
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 163/335 (48%), Gaps = 2/335 (0%)
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+T S V YNV +KV K ++ EK++ L M G++PD ++ T+I+ A + G
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
A+E F++MS G EPD + +ID + ++G+ A +++R R E + V+++
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR-ARTEKWRIDAVTFS 284
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+IR G + L I+E MK K ++ Y+ LI + + A+ +YKD+I
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEA 380
+P+ T A++ + +++ ++ EM + G S VI YN + +N V+EA
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
I++ + DS T+ LI +G +++A L + G + +F +S+I
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
K +++DD + + G + C L++
Sbjct: 465 CYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ AY + D AL+L+ + R R +F++L+ + VS ++ +
Sbjct: 251 MIDAYGRAGNVDMALSLYDRA-RTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL 309
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV PN+ YN LI + + + +AK + + + G P+ +Y L+ A + + A
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L ++ EM E+G+ V+ YN ++ + +A E+++ + ET P+ +++ +I
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT 429
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ GR SE+ +M++ + +F +S+I + +D R + ++ ++P
Sbjct: 430 VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Query: 326 DVVTCNAMLN 335
D C +LN
Sbjct: 490 DDRFCGCLLN 499
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 45/462 (9%)
Query: 18 KSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCN 77
+ EKN S+ FQ +H Y SA L H V D ++ +I QN
Sbjct: 62 QPEKNTTSS---FQALRKHRRY-QRSAFLDH---NVDMD--------ELLASIHQTQN-- 104
Query: 78 CSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
E +LL Y R + +R SLL+ W+R+
Sbjct: 105 --EKELFSLLSTYKDRQL-------------------SIRFMVSLLSR---ENDWQRSLA 140
Query: 138 FFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
+ + A +P+V YNV+++ + + ++F+ A GL M L PD+++Y TLI +
Sbjct: 141 LLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF 200
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
K G ++AL +M + V D++ Y+ +I+ + D+ KA ++ RL R + P+
Sbjct: 201 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR-SGITPD 259
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
+V+YN MI + F E+ + + M + + +YS+L+ + A V+
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL-WEEMGQSGSRNVISYNIFIKGLFENG 375
+M + D+ TCN M++ + V+E+ L W NV+SYN ++ E
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
EA++++ L+ + + TY +I K KA +++E + RG + + Y
Sbjct: 380 LFGEAIHLFR-LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
S++I+ K +LD AA + + G +++ + +I +
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 216/501 (43%), Gaps = 59/501 (11%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHS----SAVLQHVLRRVASDPTLLP 61
+ LS +++LL E + +L L YT S + VL++VLR D +
Sbjct: 118 RQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFD---IA 174
Query: 62 HAPHIIGAIEAAQNCNCSED--VPLTLLKAYAKRSMPDEALNLFRKM--DRVFGCRPGVR 117
H G + + + D TL+ ++ K M D AL+ +KM DRV G +
Sbjct: 175 H-----GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSG---DLV 226
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
+++L+ + +A F+ +G++P++ YN +I V K + F +A+ L++ M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE----------------------- 214
+ G+ P+ SY TL++ + AL VF EM E
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 215 ------------RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
+EP+V+ YN I+ + ++ F +A ++ RL++ + + NVV+YN
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF-RLMQRKDIEQNVVTYNT 405
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
MI+ + ++ + + M+ + + TYS++I + G LD A +++ +
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMN 382
V D V M+ + G + + L E+ + I I L + G+ EEA
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN---IPRETAITILAKAGRTEEATW 522
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
++ E+ D + +G +I+ +N ++V E+ G D + ++NA
Sbjct: 523 VFRQAF-ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 443 CKERRLDDAAGVVSLMDKRGC 463
K+R + A V M + GC
Sbjct: 582 GKQREFEKADTVYREMQEEGC 602
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 189/378 (50%), Gaps = 11/378 (2%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSP--NVETYNV 156
AL++F+ + G + ++N+L+ + +Q++ ++ D + ET+ +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKL---IWSLVDDMKAKKLLSKETFAL 167
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+ + + R+ ++A G M G + + + +++ +K ++ A +VFD+M ++
Sbjct: 168 ISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR 227
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
EPD+ Y ++++G+ + + L+ +E+ R +++E P+VV+Y ++I + ++ E+
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEV-NREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ + M++ K + SLI+GL L+ A ++ + T NA++
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 337 LCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
C ++E++++ +EM G N +Y+I + L + +EA +++ + E +
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTV-- 404
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
+TY I++ C L+ A+++ +E + +G + +SS+I ALC E +LD+A
Sbjct: 405 --STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 462
Query: 456 SLMDKRGCKLNTHVCNPL 473
+ M G + H+ + L
Sbjct: 463 NEMLDVGIRPPGHMFSRL 480
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 190/455 (41%), Gaps = 46/455 (10%)
Query: 8 LSPHRLLNLLKSEKNPHS-ALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHI 66
LSP + +LK N AL +F+ A G+ H+++ ++ + + I
Sbjct: 92 LSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK----IKQFKLI 147
Query: 67 IGAIEAAQNCNC-SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
++ + S++ + + YA+ EA+ F KM+ FG + FN +L+
Sbjct: 148 WSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEE-FGFKMESSDFNRMLDT 206
Query: 126 FAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
+ S A+K F P++++Y +L++ ++ + + R M G PD
Sbjct: 207 LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPD 266
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+YG +INA K A+ F+EM +R +P
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS------------------------- 301
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
P++ + +I GL + +++LE +ER K + + TY++L+
Sbjct: 302 ---------PHI--FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYN 365
++ A + +M + V P+ T + +L+ L + + +E++E+++ M S V +Y
Sbjct: 351 QRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM--SCEPTVSTYE 408
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I ++ +++ A+ IW+ + G+ L + LI LC L++A + E
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLP-GMHMFSSLITALCHENKLDEACEYFNEMLD 467
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
G +S + L E R D +V MD+
Sbjct: 468 VGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 205 ALEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDF-----LKANEMWERLLREETVFPNVV 258
AL VF +++G + YN +I+ K F L + ++LL +ET
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKET------ 164
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+ ++ R +R + E++ + +M++ K + ++ ++ LS+ N+ AQ+V+ M
Sbjct: 165 -FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGK---VEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
+R PD+ + +L G WG+ + E+ EM G +V++Y I I +
Sbjct: 224 KKKRFEPDIKSYTILLEG---WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
K EEA+ + + + + LI+GL LN AL+ E ++ G ++
Sbjct: 281 KKYEEAIRFFNEM-EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
Y++++ A C +R++DA V M +G N + ++ I+
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
E LL E +V + +++ LS G + S+ W +K KH Y++LI L +
Sbjct: 82 ETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKG-FKHTTSNYNALIESLGK 140
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS- 363
+ + DM +++ T + + KV+E+ + +M + G + S
Sbjct: 141 IKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSD 199
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
+N + L ++ V +A +++ + + D +Y IL+ G + L + +V E
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKM-KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ G + DV AY +INA CK ++ ++A + M++R CK + H+ LI+G
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P V ++N LL + +R ++ F G SP+ TYN+L+ +L K + A
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L M VG+ P Y TLI+ ++ G+L A DEM + G PDV+CY ++I G
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 231 FFKSGDFLKANEMWERLLREETV---FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
+ SG+ KA EM+ RE TV PNV +YN MIRGL G F E+ + + M+
Sbjct: 369 YVVSGELDKAKEMF----REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+ YS+L+ L + G L A++V ++M+ +
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 2/263 (0%)
Query: 95 MPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
+ +A+ F K + F RP S+N++LN+ +Q++ E + G SP+V TY
Sbjct: 199 LAKQAVVQFMK-SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTY 257
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N+L+ + + ++ L M+ G PD ++Y L++ K AAL + M E
Sbjct: 258 NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G++P V+ Y +IDG ++G+ L+A + + + + P+VV Y VMI G G
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGN-LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
++ E++ M + +VFTY+S+I GL G A + K+M R +P+ V + ++
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 335 NGLCKWGKVEESFELWEEMGQSG 357
+ L K GK+ E+ ++ EM + G
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Query: 117 RSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRW 176
R+FN L+ + + ++A F T P +YN ++ L ++++ + + +
Sbjct: 185 RTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQ 244
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
M G PD +Y L+ + G ++ +FDEM+ G PD YN+++ K
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
L A ++E + P+V+ Y +I GLSR G + M K + DV Y+
Sbjct: 305 PLAALTTLNH-MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
+I G G LD A+ ++++M + P+V T N+M+ GLC G+ E+ L +EM
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 357 GSR-NVISYNIFIKGLFENGKVEEAMNI 383
G N + Y+ + L + GK+ EA +
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKV 451
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 151/314 (48%), Gaps = 3/314 (0%)
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
V +Y++L+K+ + E++ L+ M G ++ LI + + G A+ F
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF 207
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
+ P YN I++ + +++++L E+ P+V++YN+++ R
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML-EDGFSPDVLTYNILLWTNYR 266
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
G+ +++ M ++ D +TY+ L+H L + A M + P V+
Sbjct: 267 LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLH 326
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLL 388
+++GL + G +E +EM ++G R +V+ Y + I G +G++++A ++ +
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
+ L + TY +I GLC G +A +L+E E RG + + YS++++ L K +L
Sbjct: 387 VKGQLP-NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 449 DDAAGVVSLMDKRG 462
+A V+ M K+G
Sbjct: 446 SEARKVIREMVKKG 459
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 7/300 (2%)
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
SY L+ A+ G+ A + DEM + G +N++I ++G A + +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAG---LAKQAVVQF 207
Query: 248 LREETV--FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
++ +T P SYN ++ L ++ ++++M ++ DV TY+ L+ ++
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISY 364
G +D R++ +M SPD T N +L+ L K K + M + G +V+ Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
I GL G +E + ++ + D Y ++I G +G L+KA ++ E
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMV-KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
+G +VF Y+SMI LC +A ++ M+ RGC N V + L+ K L+
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 170/351 (48%), Gaps = 12/351 (3%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAP 64
P P P L+ L+ E++P + F+ A + + + AV + +RR+A+
Sbjct: 34 PSPPKPS-LITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKF----- 87
Query: 65 HIIGAIEAAQN--CNCS-EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNS 121
+ I QN N S E ++ Y + M + A +F +M C+ SFN+
Sbjct: 88 EWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER-NCKRTALSFNA 146
Query: 122 LLNAFAVSEQWERAEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
LLNA S++++ E F + P+V +YN LIK LC K F +A L+ +
Sbjct: 147 LLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENK 206
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
GL+PD ++ L++ + +G +++ M E+ V+ D+ YN + G +
Sbjct: 207 GLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEM 266
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
++++L E + P+V ++ MI+G G+ E++ ++ ++KN + F ++SL+
Sbjct: 267 VSLFDKLKGNE-LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLP 325
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
+ + G+L+ A + K++ +R+ D +++ L K K +E+ E+ E
Sbjct: 326 AICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 5/335 (1%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
EKF N+ Y ++ L ++FE + +L + + +IN
Sbjct: 55 TEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIIN 114
Query: 195 AAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF 254
+ G A +VFDEM ER + + +N +++ S F +++ L + ++
Sbjct: 115 LYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIE 174
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+V SYN +I+GL G F+E++ + + ++ K D T++ L+H G + +++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFE 373
+ M+ + V D+ + NA L GL K EE L++++ G +V ++ IKG
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
GK++EA+ W + + + L+ +CK G L A ++ +E + VD
Sbjct: 295 EGKLDEAIT-WYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 434 AYSSMINALCKERRLDDAAGVVSLM---DKRGCKL 465
+++AL K + D+A +V L D CKL
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKL 388
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 6/250 (2%)
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLS---RCGRFSESLEIWERMKKNERKHDVFTY 295
K E E +L E+ +PN+ + R ++ R G F + ++++ M + K ++
Sbjct: 85 KKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSF 144
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGR-RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
++L++ D + ++K++ G+ + PDV + N ++ GLC G E+ L +E+
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 355 QSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
G + + I++NI + + GK EE IW ++ E + D +Y + GL
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV-EKNVKRDIRSYNARLLGLAMENKS 263
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
+ + + ++ + DVF +++MI E +LD+A ++K GC+ V N L
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 474 IDGFIKNSNL 483
+ K +L
Sbjct: 324 LPAICKAGDL 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+K + EA+ L +++ G +P +FN LL+ ++E E+ +A
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENK-GLKPDHITFNILLHESYTKGKFEEGEQIWARMVE 240
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V ++ +YN + L + + E+ L + G L+PD F++ +I G L+
Sbjct: 241 KNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDE 300
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW-----ERLLREETVFPNVVS 259
A+ + E+ + G P +N ++ K+GD A E+ +RLL +E V VV
Sbjct: 301 AITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV- 359
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNE 287
+ +++G + E+ EI E K N+
Sbjct: 360 -DALVKG----SKQDEAEEIVELAKTND 382
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 4/353 (1%)
Query: 14 LNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAA 73
L+LLKSEK+P L++ + A+ P + +A + + G IE
Sbjct: 51 LSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR 110
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
+ SE + YA+ +M D +L +FR +++ F V+S N+LL A V++ ++
Sbjct: 111 PDLK-SERFAAHAIVLYAQANMLDHSLRVFRDLEK-FEISRTVKSLNALLFACLVAKDYK 168
Query: 134 RAEKFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
A++ + G+ P++ETYN +IKV C+ + ++ M G++P+ S+G +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I+ + +V M +RGV V YN+ I K +A + + +L
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGML-SAG 287
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
+ PN V+Y+ +I G F E+ ++++ M K D Y +LI+ L + G+ + A
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETAL 347
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYN 365
+ K+ + + P +++NGL K KVEE+ EL ++ + +RNV +N
Sbjct: 348 SLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWN 400
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 13/321 (4%)
Query: 144 TAGVSPNVE----TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD----KFSYGTLINA 195
A ++P+ ++ ++ L +K+ F LL + RPD +F+ ++
Sbjct: 69 AASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGF--IENRPDLKSERFAAHAIV-L 125
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
A+ L+ +L VF ++ + + V N ++ + D+ +A ++ + + + P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
++ +YN MI+ G S S I M++ K + ++ +I G D +V
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFEN 374
M R V+ V T N + LCK K +E+ L + M +G + N ++Y+ I G
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
EEA ++++++ DS Y LI+ LCK G AL + +E+ +
Sbjct: 306 DDFEEAKKLFKIMVNR-GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 435 YSSMINALCKERRLDDAAGVV 455
S++N L K+ ++++A ++
Sbjct: 365 MKSLVNGLAKDSKVEEAKELI 385
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVVTCNAML 334
SL ++ ++K E V + ++L+ + A+RVY +M + PD+ T N M+
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 335 NGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
C+ G S+ + EM + G + N S+ + I G + K +E + ++ + +
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM-KDRGV 253
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
+ +TY I I LCK +A +L+ G + YS +I+ C E ++A
Sbjct: 254 NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKK 313
Query: 454 VVSLMDKRGCKLNTHVCNPLI 474
+ +M RGCK ++ LI
Sbjct: 314 LFKIMVNRGCKPDSECYFTLI 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ--SGSRN 360
+Q LD + RV++D+ +S V + NA+L +E+ ++ EM + +
Sbjct: 127 AQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPD 186
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ +YN IK E+G + +I + + +S+++G++I G ++ +VL
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEM-ERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ RG ++ V Y+ I +LCK ++ +A ++ M G K NT + LI GF
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D+ TY+ +I + G+ + + +M + + P+ + M++G K +E ++
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
M G V +YNI I+ L + K +EA + + +L + ++ TY LIHG C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS-AGMKPNTVTYSHLIHGFCN 304
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+A ++ + +RG D Y ++I LCK + A + ++ + +
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 470 CNPLIDGFIKNSNL 483
L++G K+S +
Sbjct: 365 MKSLVNGLAKDSKV 378
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 42/355 (11%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
+RA K F ++P + T+N+L+ V ++ E A+G+LR + G+ D Y TL
Sbjct: 449 QRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTL 508
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I++ AK G ++A EVF +MS GVE ++ + +IDG ++G KA + +LR +
Sbjct: 509 ISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYG-ILRSKN 567
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN------------------------ER 288
V P+ V +N +I + G + ++ MK ER
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 289 KHDVF-------------TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
+V+ Y+ ++ S+ G+ D A +YKDM + V+PD V +A+++
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 336 GLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
++E+F + ++ G R ISY+ + ++A+ ++E + L
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE-KIKSIKLR 746
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
+T LI LC+ L KA++ L+E + G + YS ++ L ER+ D
Sbjct: 747 PTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM--LASERKDD 799
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 155/349 (44%), Gaps = 9/349 (2%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ +L+++ A S + + + F +GV N+ T+ LI + + KA G +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG--VEPDVMCYNMIIDGFFKSGD 236
++PD+ + LI+A + G ++ A +V EM ++PD + ++ +G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
+A E+++ ++ + + Y + + S+ G + + I++ MK+ + D +S
Sbjct: 625 VERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
+LI LD A + +D + + ++ ++++ C +++ EL+E++
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 357 GSRNVIS-YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
R IS N I L E ++ +AM + + L ++ TY +L+ +
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLD-EIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG---VVSLMDKR 461
+ ++L +A+ G ++ I +LCK R AG VVS R
Sbjct: 803 SFKLLSQAKGDGVSPNLI-MCRCITSLCKRRFEKACAGGEPVVSFKSGR 850
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ M DEA + + + G R G S++SL+ A ++ W++A + + +
Sbjct: 685 LIDVAGHAKMLDEAFGILQDA-KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ P + T N LI LC+ + KA L + +GL+P+ +Y L+ A+ ++ D +
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVS 803
Query: 206 LEVFDEMSERGVEPD-VMC 223
++ + GV P+ +MC
Sbjct: 804 FKLLSQAKGDGVSPNLIMC 822
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+KA + A +++ + + +G R + +N+ + S W+ A +
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHK-YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
V+P+ ++ LI V + ++A G+L+ G+R SY +L+ A D A
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LE+++++ + P + N +I + KA E + ++ + PN ++Y++++
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDE-IKTLGLKPNTITYSMLML 792
Query: 266 GLSRCGRFSESLEIWERMK 284
R F S ++ + K
Sbjct: 793 ASERKDDFEVSFKLLSQAK 811
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 151/307 (49%), Gaps = 3/307 (0%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL F + R G + ++ +++ ++Q+ K G PN TYN LI
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
+ ++A + M G PD+ +Y TLI+ AK G L+ A++++ M E G+
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS 461
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PD Y++II+ K+G A+ ++ ++ + PN+V++N+MI ++ + +L+
Sbjct: 462 PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT-PNLVTFNIMIALHAKARNYETALK 520
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
++ M+ + D TYS ++ L G L+ A+ V+ +M + PD +++
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
K G V+++++ ++ M Q+G R NV + N + ++ EA N+ + +L L
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA-LGLHPSL 639
Query: 398 TTYGILI 404
TY +L+
Sbjct: 640 QTYTLLL 646
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 169/372 (45%), Gaps = 50/372 (13%)
Query: 112 CRPG--VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
C PG V + +S+L F E A F + ++ Y +VL + +
Sbjct: 291 CNPGYVVENVSSILRRFKWGHAAEEALHNFGF--------RMDAYQA-NQVLKQMDNYAN 341
Query: 170 AKGLLRWMS-GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
A G W+ G + D +Y T++ + ++ DEM G +P+ + YN +I
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
+ ++ +A ++ ++ +E P+ V+Y +I ++ G ++++++RM++
Sbjct: 402 HSYGRANYLKEAMNVFNQM-QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
D FTYS +I+ L + G+L A R++ +M+G+ +P++VT N M+ K E + +
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
L+ +M +G + + ++Y+I ++ L G +EEA ++ + + + D YG+L+
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP-DEPVYGLLVDLW 579
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
K G ++KA Q Y +M+ A G + N
Sbjct: 580 GKAGNVDKAWQ---------------WYQAMLQA--------------------GLRPNV 604
Query: 468 HVCNPLIDGFIK 479
CN L+ F++
Sbjct: 605 PTCNSLLSTFLR 616
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 74 QNCNCSED--VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQ 131
Q C D TL+ +AK D A++++++M G P +++ ++N +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA-GLSPDTFTYSVIINCLGKAGH 479
Query: 132 WERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
A + F G +PN+ T+N++I + K R +E A L R M G +PDK +Y
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ G L A VF EM + PD Y +++D + K+G+ KA + W + + +
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ-WYQAMLQA 598
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
+ PNV + N ++ R R SE+ + + M
Sbjct: 599 GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 38/271 (14%)
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
+ G + D Y ++ ++ F + N++ + ++R+ PN V+YN +I R
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCK-PNTVTYNRLIHSYGRANYL 410
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
E++ ++ +M++ + D TY +LI ++ G LD A +Y+ M +SPD T + +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 334 LNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+N L K G + + L+ EM GQ + N++++NI I
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA----------------------- 507
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+H +N AL++ + ++ G D YS ++ L L++A
Sbjct: 508 -----------LHAKARN--YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
GV + M ++ + V L+D + K N+
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV 585
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
D T M+ L + + E +L +EM + G + N ++YN I ++EAMN++
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ E D TY LI K G+L+ A+ + + + G D F YS +IN L K
Sbjct: 418 NQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
L A + M +GC N N +I K N K
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 165/377 (43%), Gaps = 15/377 (3%)
Query: 109 VFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREF 167
+F + + F + FA W+R+ + F Y PN Y ++I +L ++
Sbjct: 98 IFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL 157
Query: 168 EKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMI 227
+K + M G+ FSY LINA + G +LE+ D M + P ++ YN +
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 228 IDGFFKSGDFLKANEMWERLL------REETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
I+ + G WE LL R E + P++V+YN ++ + G E+ ++
Sbjct: 218 INACARGG------LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
M D+ TYS L+ ++ L+ + +M PD+ + N +L K G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 342 KVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
++E+ ++ +M +G + N +Y++ + ++G+ ++ ++ L + + D+ TY
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEMKSSNTDPDAATY 390
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
ILI + GY + + + + + D+ Y +I A K +DA ++ M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 461 RGCKLNTHVCNPLIDGF 477
++ +I+ F
Sbjct: 451 NDIVPSSKAYTGVIEAF 467
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 172/368 (46%), Gaps = 5/368 (1%)
Query: 85 TLLKAYAKRSMPDEAL-NLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
T++ A A+ + E L LF +M R G +P + ++N+LL+A A+ + AE F +
Sbjct: 216 TVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ P++ TY+ L++ K R EK LL M+ G PD SY L+ A AK G +
Sbjct: 275 DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A+ VF +M G P+ Y+++++ F +SG + +++ ++ P+ +YN++
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE-MKSSNTDPDAATYNIL 393
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I G F E + ++ M + + D+ TY +I + G + A+++ + M +
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMN 382
P ++ + EE+ + M + GS I +++ + G V+E+
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
I L+ ++ + + T+ I + G +A++ + E D D ++++
Sbjct: 514 ILSRLV-DSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Query: 443 CKERRLDD 450
R +D+
Sbjct: 573 SFARLVDE 580
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 178/396 (44%), Gaps = 4/396 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+ K +A R +L LF+ M R C+P + +++ ++ + F +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG-DLNA 204
GVS +V +Y LI + +E + LL M + P +Y T+INA A+ G D
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
L +F EM G++PD++ YN ++ G +A EM R + + + P++ +Y+ ++
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA-EMVFRTMNDGGIVPDLTTYSHLV 289
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ R + ++ M D+ +Y+ L+ ++ G++ A V+ M +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
P+ T + +LN + G+ ++ +L+ EM S + + +YNI I+ E G +E + +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ ++ E + D TY +I K G A ++L+ AY+ +I A
Sbjct: 410 FHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 444 KERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ ++A + M + G + + L+ F +
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 11/382 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL+AYAK EA+ +F +M + GC P +++ LLN F S +++ + F ++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
P+ TYN+LI+V + F++ L M + PD +Y +I A K G A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++ M+ + P Y +I+ F ++ + +A + + E P++ +++ ++
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN-TMHEVGSNPSIETFHSLLY 500
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+R G ES I R+ + + T+++ I Q G + A + Y DM R P
Sbjct: 501 SFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
D T A+L+ V+E E +EEM S I + ++ GK E ++ E
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY--GKTERWDDVNE 618
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKA-----LQVLEEAEHRGGDVDVFAYSSMIN 440
LL E L+ + +I + K Y + + VL++ G + + Y+++++
Sbjct: 619 LL--EEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLD 676
Query: 441 ALCKERRLDDAAGVVSLMDKRG 462
AL + + AA V++ KRG
Sbjct: 677 ALWWLGQKERAARVLNEATKRG 698
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 14/316 (4%)
Query: 169 KAKGLLRWMSGVGLRPDKFSYG--TLINAAAK---RGDLNAALEVFDEMSERGVEPDVMC 223
K K L+ V + K+SY +LIN + RG + L++F + +
Sbjct: 54 KTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKN------KLSLND 107
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
+ ++ F GD+ ++ +++ + R+ PN Y +MI L R G + LE+++ M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG-K 342
VF+Y++LI+ + G + + + M ++SP ++T N ++N + G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 343 VEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
E L+ EM G + ++++YN + G +EA ++ + + + D TTY
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR-TMNDGGIVPDLTTYS 286
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
L+ K L K +L E G D+ +Y+ ++ A K + +A GV M
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 462 GCKLNTHVCNPLIDGF 477
GC N + + L++ F
Sbjct: 347 GCTPNANTYSVLLNLF 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 253 VFPNVVSYN---VMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNL 308
+F N +S N ++ + + G + SL +++ M++ K + Y+ +I L + G L
Sbjct: 98 IFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL 157
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIF 367
D V+ +M + VS V + A++N + G+ E S EL + M + S ++++YN
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 368 IKGLFENGKVEEAMNIWELLLG------ETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
I G WE LLG + D TY L+ G ++A V
Sbjct: 218 INACARGGL------DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 422 EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
G D+ YS ++ K RRL+ ++ M G + N L++ + K+
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 482 NL 483
++
Sbjct: 332 SI 333
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 187/414 (45%), Gaps = 39/414 (9%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ K+ + DEA+ L ++M++ G RP V ++ L++ F ++ + + A K
Sbjct: 221 LIHGVCKKGVVDEAIRLVKQMEQE-GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVR 279
Query: 146 GVSPNVET-----------------YNVLIKVLCKKREFEK---------------AKGL 173
++PN T + VL+ + K ++ AK
Sbjct: 280 KLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKET 339
Query: 174 LRWMSGVGLR---PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+++ +G R PD ++ ++ K DL +FD RGV+P Y +++
Sbjct: 340 GQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQA 399
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ F + + + + + + + +V SYN +I L + R + M+
Sbjct: 400 LLNAQRFSEGDR-YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISP 458
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
++ T+++ + G S G++ V + ++ PDV+T + ++N LC+ +++++F+ +
Sbjct: 459 NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF 518
Query: 351 EEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
+EM + G N I+YNI I+ G + ++ ++ + E L+ D Y I CK
Sbjct: 519 KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM-KENGLSPDLYAYNATIQSFCK 577
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
+ KA ++L+ G D F YS++I AL + R +A + S +++ GC
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/541 (20%), Positives = 227/541 (41%), Gaps = 81/541 (14%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRH-PGYTHSSA---VLQHVLRRVASDPTLLPHA 63
L+ ++++L+++ NP +L+ + + P Y + VL + L R P LL +
Sbjct: 74 LNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFR--KGPLLL--S 129
Query: 64 PHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
++ I + S+++ L+ ++ + + ++F ++ G +P R +N+++
Sbjct: 130 MELLKEIRDS-GYRISDELMCVLIGSWGRLGLAKYCNDVFAQIS-FLGMKPSTRLYNAVI 187
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
+A S + A F + G P+ TYN+LI +CKK ++A L++ M G R
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
P+ F+Y LI+ G ++ AL+ + M R + P+ + G F+ KA E+
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEV 307
Query: 244 WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS 303
+ +++ V Y+ ++ LS E+ + ++ + D T+++ + L
Sbjct: 308 LVGFMEKDSNLQR-VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 304 QMGNLDGAQRVYKDMIGRRVSP-----------------------------------DVV 328
+ +L R++ + R V P V
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
+ NA+++ LCK ++E + EM G S N++++N F+ G G V++ + E L
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 388 LG----------------------------------ETALAVDSTTYGILIHGLCKNGYL 413
L E + + TY ILI C G
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
++++++ + + G D++AY++ I + CK R++ A ++ M + G K + + L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 474 I 474
I
Sbjct: 607 I 607
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 109 VFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
V G V S+N++++ + + E A F G+SPN+ T+N + + + +
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMII 228
K G+L + G +PD ++ +IN + ++ A + F EM E G+EP+ + YN++I
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
+GD ++ +++ + ++E + P++ +YN I+ + + ++ E+ + M +
Sbjct: 538 RSCCSTGDTDRSVKLFAK-MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
K D FTYS+LI LS+ G A+ ++ + PD T
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 3/202 (1%)
Query: 93 RSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVE 152
R + + A+ L DR G P + +FN+ L+ ++V ++ G P+V
Sbjct: 439 RRIENAAMFLTEMQDR--GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 153 TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM 212
T++++I LC+ +E + A + M G+ P++ +Y LI + GD + ++++F +M
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
E G+ PD+ YN I F K KA E+ + +LR + P+ +Y+ +I+ LS GR
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLR-IGLKPDNFTYSTLIKALSESGR 615
Query: 273 FSESLEIWERMKKNERKHDVFT 294
SE+ E++ ++++ D +T
Sbjct: 616 ESEAREMFSSIERHGCVPDSYT 637
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 158/359 (44%), Gaps = 38/359 (10%)
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
+VL L +K + LL+ + G R LI + + G +VF ++S
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
G++P YN +ID KS A ++++ R + P+ +YN++I G+ + G
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQM-RSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
E++ + ++M++ + +VFTY+ LI G G +D A + + M R+++P+ T +
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 335 NGLCKWGKVEESFE-LWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+G+ + ++FE L M + + + Y+ + L N +E + GE
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI-GERGY 351
Query: 394 AVDSTTYGILIHGLCK-----------------------NGYLNKALQVLEEAEHRGGD- 429
DS+T+ + L K NGYL +L GD
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 430 ------VD-----VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
VD V++Y+++I+ LCK RR+++AA ++ M RG N N + G+
Sbjct: 412 YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
YN I L ++ ++ A ++ + + D TY ILIHG+CK G +++A++++++
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
E G +VF Y+ +I+ R+D+A + +M R N + G +
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 164/314 (52%), Gaps = 32/314 (10%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEV 208
P V LI LCK + +A+ L G+ R D ++ +I K GD+ A E+
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLF---DGLPER-DVVTWTHVITGYIKLGDMREAREL 99
Query: 209 FDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
FD + R +V+ + ++ G+ +S A +L +E NVVS+N MI G +
Sbjct: 100 FDRVDSR---KNVVTWTAMVSGYLRSKQLSIA-----EMLFQEMPERNVVSWNTMIDGYA 151
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ GR ++LE+++ M + ++ +++S++ L Q G +D A +++ M R DVV
Sbjct: 152 QSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVV 203
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
+ AM++GL K GKV+E+ L++ M + RN+IS+N I G +N +++EA +++++
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPE---RNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
D ++ +I G +N +NKA + + R + +V ++++MI + +
Sbjct: 261 ER-----DFASWNTMITGFIRNREMNKACGLFD----RMPEKNVISWTTMITGYVENKEN 311
Query: 449 DDAAGVVSLMDKRG 462
++A V S M + G
Sbjct: 312 EEALNVFSKMLRDG 325
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 132/228 (57%), Gaps = 23/228 (10%)
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+VV++ +I G + G E+ E+++R+ + + +V T+++++ G + L A+ ++
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENG 375
++M R +VV+ N M++G + G+++++ EL++EM + RN++S+N +K L + G
Sbjct: 133 QEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPE---RNIVSWNSMVKALVQRG 185
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+++EAMN++E + D ++ ++ GL KNG +++A ++ + R ++ ++
Sbjct: 186 RIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISW 236
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
++MI + R+D+A + +M +R + N +I GFI+N +
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREM 280
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 139/261 (53%), Gaps = 28/261 (10%)
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK--FSYGTLINAAAKR 199
FD NV T+ ++ + ++ A+ L + M P++ S+ T+I+ A+
Sbjct: 100 FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGYAQS 153
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
G ++ ALE+FDEM ER +++ +N ++ + G +A ++ER+ R + VVS
Sbjct: 154 GRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRD-----VVS 204
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ M+ GL++ G+ E+ +++ M + ++ +++++I G +Q +D A ++++ M
Sbjct: 205 WTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEE 379
R D + N M+ G + ++ ++ L++ M + +NVIS+ I G EN + EE
Sbjct: 261 ER----DFASWNTMITGFIRNREMNKACGLFDRMPE---KNVISWTTMITGYVENKENEE 313
Query: 380 AMNIWELLLGETALAVDSTTY 400
A+N++ +L + ++ + TY
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTY 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 161/330 (48%), Gaps = 20/330 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++KA +R DEA+NLF +M R V S+ ++++ A + + + A + F
Sbjct: 176 SMVKALVQRGRIDEAMNLFERMPR-----RDVVSWTAMVDGLAKNGKVDEARRLFDCMP- 229
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
N+ ++N +I + ++A L + M D S+ T+I + ++N
Sbjct: 230 ---ERNIISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNK 282
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +FD M E+ +V+ + +I G+ ++ + +A ++ ++LR+ +V PNV +Y ++
Sbjct: 283 ACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
S E +I + + K+ + + S+L++ S+ G L A++++ + G
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN--GLVCQ 396
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
D+++ N+M+ G +E+ E++ +M + G + + ++Y + G VE+ M
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYL 413
++ L+ + +L + Y L+ + G L
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 174/382 (45%), Gaps = 32/382 (8%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ YA+ D+AL LF +M + S+NS++ A + + A F
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMP-----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK--FSYGTLINAAAKRGDL 202
+V ++ ++ L K + ++A+ L M P++ S+ +I A+ +
Sbjct: 200 R----DVVSWTAMVDGLAKNGKVDEARRLFDCM------PERNIISWNAMITGYAQNNRI 249
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
+ A ++F M ER D +N +I GF ++ + KA +++R+ + NV+S+
Sbjct: 250 DEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK-----NVISWTT 300
Query: 263 MIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
MI G E+L ++ +M + K +V TY S++ S + L Q++++ +I +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ-LISK 359
Query: 322 RV-SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
V + + +A+LN K G++ + ++++ G R++IS+N I +G +EA
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDN-GLVCQRDLISWNSMIAVYAHHGHGKEA 418
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE-AEHRGGDVDVFAYSSMI 439
+ ++ + + + TY L+ G + K ++ ++ + Y+ ++
Sbjct: 419 IEMYNQMR-KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLV 477
Query: 440 NALCKERRLDDAAGVVSLMDKR 461
+ + RL D ++ D R
Sbjct: 478 DLCGRAGRLKDVTNFINCDDAR 499
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 119/273 (43%), Gaps = 6/273 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ Y + +EALN+F KM R +P V ++ S+L+A + ++
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ N + L+ + K E A+ + +G+ + D S+ ++I A G
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFD--NGLVCQRDLISWNSMIAVYAHHGHGKE 417
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A+E++++M + G +P + Y ++ +G K E ++ L+R+E++ Y ++
Sbjct: 418 AIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLV 477
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R GR + + ++ + Y +++ + + A+ V K ++ S
Sbjct: 478 DLCGRAGRLKDVTNF---INCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL-ETGS 533
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
D T M N GK EE+ E+ +M + G
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/512 (19%), Positives = 222/512 (43%), Gaps = 48/512 (9%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
KPL+ + + L+ L F + Y H H++ V
Sbjct: 35 KPLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDR 94
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
II ++ + C V L LL+ + + + D+A+ ++ M FG P R+ N +++
Sbjct: 95 IIERLKIS-GCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSS-FGFVPNTRAMNMMMDV 152
Query: 126 -FAVSEQWERAEKFFAYFDTAGVS-PNVETYNVLIKVLCKKR---EFEKAKGLLRWMSGV 180
F ++ E F G+ N ++++ + C + + K +L+ M G
Sbjct: 153 NFKLNVVNGALEIF------EGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGE 206
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G P++ +G ++ + G ++ A +V M G+ V ++M++ GFF+SG+ KA
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
+++ +++ + PN+V+Y +I+G G E+ + +++ D+ + +IH
Sbjct: 267 VDLFNKMI-QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE----------ESFEL- 349
+++G + A++V+ + R++ PD T ++L+ LC GK + F+L
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 350 --------WEEMGQSG--------------SRNVISYNIFIKGLFENGKVEEAMNIWELL 387
+ ++G + + + +Y +++ L G A+ +++++
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKII 445
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
+ E +D+ + +I L + G N A+ + + +DV +Y+ I L + +R
Sbjct: 446 IKEKK-HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKR 504
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+++A + M + G N +I G K
Sbjct: 505 IEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 147/322 (45%), Gaps = 6/322 (1%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G V ++ L++ F S + ++A F G SPN+ TY LIK ++A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+L + GL PD +I+ + G A +VF + +R + PD + I+
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
SG F ++ R+ ++V+ N++ S+ G S +L++ M +
Sbjct: 362 LCLSGKF----DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +TY+ + L + G A ++YK +I + D +A+++ L + GK + L+
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 351 EE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
+ + + +V+SY + IKGL ++EEA ++ + E + + TY +I GLCK
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLC-CDMKEGGIYPNRRTYRTIISGLCK 536
Query: 410 NGYLNKALQVLEEAEHRGGDVD 431
K ++L E G ++D
Sbjct: 537 EKETEKVRKILRECIQEGVELD 558
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 178/358 (49%), Gaps = 12/358 (3%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERA-EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G P + ++N + A+ + E A E + + D A ++P++ T+ +L+K L EK
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER--GVEPDVMCYNMI 227
A + M+ G D Y L+ K D + L+++ E+ E+ G D + Y +
Sbjct: 220 AMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 228 IDGFFKSGDFLKANEMWERLLREET-VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK- 285
+ G+F +A E +E + E + V + ++YN ++ LS G+F E+L++++ +KK
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE 339
Query: 286 -NERKH---DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
N +H ++ T++ +++G G + A V++ M + SPD ++ N ++N LC
Sbjct: 340 HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNE 399
Query: 342 KVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
+ E+ +L+ EM + + + +Y + + F+ GK++E ++ ++ E+ L + Y
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV-ESNLRPNLAVY 458
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
L L K G L+ A + + +D AY ++ AL + RLD+ +V M
Sbjct: 459 NRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 169/350 (48%), Gaps = 12/350 (3%)
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+A V ++ +N ++K L ++ + E+A R RP F+ T++ A ++
Sbjct: 89 SALVGKRLDLHNHILK-LIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYG 147
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A L++ +++ G+ P+++ YN+I + A E ++ + + P++ ++ ++
Sbjct: 148 ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRIL 207
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM---IG 320
++GL +++EI E M D YS L+ G + + DG ++Y+++ +G
Sbjct: 208 VKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLG 267
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR---NVISYNIFIKGLFENGKV 377
V D V ++ G +E+ E +EE S+ + ++YN ++ L ENGK
Sbjct: 268 GFVD-DGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKF 326
Query: 378 EEAMNIWELLLGE----TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
+EA+ +++ + E LAV+ T+ ++++G C G +A++V + D
Sbjct: 327 DEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTL 386
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
++++++N LC L +A + M+++ K + + L+D K +
Sbjct: 387 SFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 6/202 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFG----CRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
+L+A ++ DEAL LF + + + +FN ++N + ++E A + F
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
SP+ ++N L+ LC +A+ L M ++PD+++YG L++ K G
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
++ + M E + P++ YN + D K+G A ++ ++ + + + +Y
Sbjct: 436 IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM--DDEAYK 493
Query: 262 VMIRGLSRCGRFSESLEIWERM 283
++R LS GR E L+I + M
Sbjct: 494 FIMRALSEAGRLDEMLKIVDEM 515
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 174/345 (50%), Gaps = 12/345 (3%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKRE-FEKAKGLLRWM 177
F ++ A+ S + E A + F P+ T N L+ VL +KR+ E +L
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 170
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
+G+R ++ ++G LI+A + G+++ A E+ MS+ V D Y+ ++ K D
Sbjct: 171 CRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDS 230
Query: 238 LKANEM-WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
+ + + LR+ P + Y V++R L GR E + + +MK + + D+ Y+
Sbjct: 231 SCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
++ G+ + A +++ +++ ++PDV T N +NGLCK +E + ++ M +
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 357 GSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
GS NV++YNI IK L + G + A +W+ + + +S T+ I+I + +
Sbjct: 351 GSEPNVVTYNILIKALVKAGDLSRAKTLWK-EMETNGVNRNSHTFDIMISAYIEVDEVVC 409
Query: 416 ALQVLEEAEHRGGDVDVFAYSS----MINALCKERRLDDAAGVVS 456
A +LEEA +++VF SS +I+ LC++ +D A +++
Sbjct: 410 AHGLLEEA----FNMNVFVKSSRIEEVISRLCEKGLMDQAVELLA 450
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 105 KMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK 164
K DRV P + + +L E + +A+K F G++P+V TYNV I LCK+
Sbjct: 278 KCDRV---EPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 165 REFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCY 224
+ E A ++ M+ +G P+ +Y LI A K GDL+ A ++ EM GV + +
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 225 NMIIDGFFKSGDFLKANEMWE 245
+++I + + + + A+ + E
Sbjct: 395 DIMISAYIEVDEVVCAHGLLE 415
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 148/372 (39%), Gaps = 29/372 (7%)
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
N SE + F P + Y +IK L K + E +L +
Sbjct: 45 NLLTDSENASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEV---- 100
Query: 184 PDKFS-----YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD-- 236
+KF + +I A G + A+EVF ++ P N ++ +
Sbjct: 101 SEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSL 160
Query: 237 ------FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+KA M RL EE+ F ++I L R G + E+ M ++
Sbjct: 161 ELVPEILVKACRMGVRL--EESTF------GILIDALCRIGEVDCATELVRYMSQDSVIV 212
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRV--YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
D YS L+ + + + + +D+ R SP + ++ L + G+ +E
Sbjct: 213 DPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVS 272
Query: 349 LWEEMG-QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
+ +M +++ Y I ++G+ + +A +++ LL A D TY + I+GL
Sbjct: 273 VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGL-APDVYTYNVYINGL 331
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
CK + AL+++ G + +V Y+ +I AL K L A + M+ G N+
Sbjct: 332 CKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNS 391
Query: 468 HVCNPLIDGFIK 479
H + +I +I+
Sbjct: 392 HTFDIMISAYIE 403
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 144/308 (46%), Gaps = 11/308 (3%)
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFD--EMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
P +Y +I AK L V E+SE+ P+ + + +I + SG +A
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSGRIEEAI 128
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL-EIWERMKKNERKHDVFTYSSLIH 300
E++ ++ V P+ + N ++ L R + E + EI + + + + T+ LI
Sbjct: 129 EVFFKIPNFRCV-PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILID 187
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL---WEEMGQSG 357
L ++G +D A + + M V D + +L+ +CK K F++ E++ ++
Sbjct: 188 ALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTR 246
Query: 358 -SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
S + Y + ++ L E G+ +E +++ + + + D Y I++ G+ + KA
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDR-VEPDLVCYTIVLQGVIADEDYPKA 305
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
++ +E G DV+ Y+ IN LCK+ ++ A ++S M+K G + N N LI
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 477 FIKNSNLT 484
+K +L+
Sbjct: 366 LVKAGDLS 373
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 180/411 (43%), Gaps = 88/411 (21%)
Query: 139 FAYFDTAGVSP----NVETYNVLIKVLCKKREF--------------------------- 167
+ +F A P ++E Y ++K+L K R+F
Sbjct: 131 YRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLV 190
Query: 168 ---------EKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD-------- 210
+KA +L M G PD++ +G L++A K G + A ++F+
Sbjct: 191 QRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV 250
Query: 211 --------------------------EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
+M+E G EPD++ Y ++ G+ +G A ++
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
R +R PN Y V+I+ L + R E+++++ M++ E + DV TY++L+ G +
Sbjct: 311 -RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS- 363
G +D V DMI + + P +T ++ K EE EL E+M Q I
Sbjct: 370 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 429
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
YN+ I+ + G+V+EA+ +W + E L+ T+ I+I+GL G L +A +E
Sbjct: 430 YNVVIRLACKLGEVKEAVRLWN-EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 424 EHRGGDVDVFAYSS------MINALCKERRLDDAAGVVSLMDKRG-CKLNT 467
RG +F+ S ++N + K+++L+ A V S + +G C+LN
Sbjct: 489 VTRG----LFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNV 535
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 6/334 (1%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A K +A LF M F +R F SLL + + A+ + A
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA 281
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P++ Y L+ + A LLR M G P+ Y LI A K + A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++VF EM E DV+ Y ++ GF K G K + + +++ + + P+ ++Y ++
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK-KGLMPSELTYMHIMV 400
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ F E LE+ E+M++ E D+ Y+ +I ++G + A R++ +M +SP
Sbjct: 401 AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISY---NIFIKGLFENGKVEEAMN 382
V T M+NGL G + E+ + ++EM G +V Y + + + ++ K+E A +
Sbjct: 461 GVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKD 520
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
+W + + A ++ ++ I IH L GY +A
Sbjct: 521 VWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 6/303 (1%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G P + + +LL+ +A + + A G PN Y VLI+ LCK E+A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ M D +Y L++ K G ++ V D+M ++G+ P + Y I+
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
K F + E+ E+ +R+ P++ YNV+IR + G E++ +W M++N
Sbjct: 402 HEKKESFEECLELMEK-MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV--SPDVVTCNAMLNGLCKWGKVEESFE 348
V T+ +I+GL+ G L A +K+M+ R + T +LN + K K+E + +
Sbjct: 461 GVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKD 520
Query: 349 LWEEMGQSGS--RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
+W + G+ NV+S+ I+I LF G +EA + + + + E T+ L+ G
Sbjct: 521 VWSCITSKGACELNVLSWTIWIHALFSKGYEKEACS-YCIEMIEMDFMPQPDTFAKLMKG 579
Query: 407 LCK 409
L K
Sbjct: 580 LKK 582
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 145/314 (46%), Gaps = 17/314 (5%)
Query: 75 NCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWER 134
N NC L++A K +EA+ +F +M+R + C V ++ +L++ F +W +
Sbjct: 321 NANCY----TVLIQALCKVDRMEEAMKVFVEMER-YECEADVVTYTALVSGFC---KWGK 372
Query: 135 AEKFFAYFD---TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGT 191
+K + D G+ P+ TY ++ KK FE+ L+ M + PD Y
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL-RE 250
+I A K G++ A+ +++EM E G+ P V + ++I+G G L+A++ ++ ++ R
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLD 309
+ +++ + + + + ++W + K + +V +++ IH L G
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEK 552
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIF-- 367
A +MI P T ++ GL K E + E+ E++ + +S+ ++
Sbjct: 553 EACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREMSFKMYKR 612
Query: 368 --IKGLFENGKVEE 379
++ L E K ++
Sbjct: 613 RGVQDLTEKAKSKQ 626
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 2/221 (0%)
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKK-NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
Y M++ LS+ +F + E M+K N + + + L+ + + A V +M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVE 378
PD +L+ LCK G V+++ +L+E+M N+ + + G GK+
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMM 269
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM 438
EA + + + E D Y L+ G G + A +L + RG + + Y+ +
Sbjct: 270 EAKYVL-VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
I ALCK R+++A V M++ C+ + L+ GF K
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 186/367 (50%), Gaps = 25/367 (6%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGC-----RPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
+ AY +R EA +RVF C + V +N ++ A+ +S+ E+A + F
Sbjct: 478 IDAYGERGYLSEA-------ERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFES 530
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+ GV+P+ TYN L+++L K + L M G D Y +I++ K G
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
LN A EV+ EM E +EPDV+ Y ++I+ F +G+ +A E ++E + N V YN
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE-AMKEAGIPGNSVIYN 649
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKH---DVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+I+ ++ G E+ I+ ++ ++ K DV+T + +I+ S+ + A+ ++ D
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF-DS 708
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFE-NGK 376
+ +R + T ML K G+ EE+ ++ ++M + + +SYN + GLF +G+
Sbjct: 709 MKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL-GLFALDGR 767
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE----HRGGDVDV 432
+EA+ ++ ++ + + D +T+ L L K G KA++ +EE RG ++ +
Sbjct: 768 FKEAVETFKEMVS-SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWI 826
Query: 433 FAYSSMI 439
SS++
Sbjct: 827 STLSSLV 833
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 177/414 (42%), Gaps = 48/414 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ Y E +L + M C P R++N L++ + ERA +F
Sbjct: 338 TMIHIYGNNGQLGEVTSLMKTMK--LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS---------------- 188
G+ P+ +Y L+ + E+A+GL+ M + D+++
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 189 ------------------YGTLINAAAKRGDLNAALEVF---DEMSERGVEPDVMCYNMI 227
Y I+A +RG L+ A VF E+++R V+ YN++
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVM 511
Query: 228 IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
I + S KA E++E ++ V P+ +YN +++ L+ + E+M++
Sbjct: 512 IKAYGISKSCEKACELFESMM-SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
D Y ++I ++G L+ A+ VYK+M+ + PDVV ++N G V+++
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 348 ELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGE--TALAVDSTTYGILI 404
E M ++G N + YN IK + G ++EA I+ LL D T +I
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
+ + + KA + + + R G+ + F ++ M+ K R ++A + M
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQR-GEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 16/334 (4%)
Query: 131 QWERAEKFFAYFDTAGVSP-NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
WERA + F +F + G NV YN+++++L K ++ + L M G++P +Y
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 190 GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
GTLI+ +K G AL +MS+ G++PD + +++ + K+ +F KA E +++
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 250 EET-----VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+E V + +YN MI + G+ E+ E ++RM + T++++IH
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
G L + K M +PD T N +++ K +E + ++EM G + + +S
Sbjct: 346 NGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLCKNGYLNKALQVL 420
Y + VEEA E L+ E + +D T L + L K+
Sbjct: 405 YRTLLYAFSIRHMVEEA----EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF 460
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
+ H G++ YS+ I+A + L +A V
Sbjct: 461 KRF-HVAGNMSSEGYSANIDAYGERGYLSEAERV 493
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 153/377 (40%), Gaps = 28/377 (7%)
Query: 111 GCRP-GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
GC V +N +L + +W + + G+ P TY LI V K
Sbjct: 181 GCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVH 240
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS--ERGVEPDV----MC 223
A L MS +G++PD+ + G ++ K + A E F + S E + V
Sbjct: 241 ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT 300
Query: 224 YNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
YN +ID + KSG +A+E ++R+L EE + P V++N MI G+ E + + M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRML-EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 284 KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
K + D TY+ LI ++ +++ A +K+M + PD V+ +L V
Sbjct: 360 KLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 344 EESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAM--NIWELLLG-ETALAVDSTTY 400
EE+ L EM + + + + VE M W A + S Y
Sbjct: 419 EEAEGLIAEMDDDN----VEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY 474
Query: 401 GILIHGLCKNGYLNKALQVL---EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
I + GYL++A +V +E R V Y+ MI A + + A +
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFES 530
Query: 458 MDKRG-----CKLNTHV 469
M G C NT V
Sbjct: 531 MMSYGVTPDKCTYNTLV 547
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 178/366 (48%), Gaps = 6/366 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
V+ N +L F +S +W+ + F + G +V TY+ IK + K KA + +
Sbjct: 98 VQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAK-NVSKALEIYQ 155
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ + + + ++++ K G L++ +++FD+M G++PDV+ YN ++ G K
Sbjct: 156 SIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 236 D-FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
+ + KA E+ L +V+ Y ++ + GR E+ ++MK +++
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVM-YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
YSSL++ S G+ A + +M + P+ V +L K G + S EL E+
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 355 QSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+G + N + Y + + GL + GK+EEA +I++ + G+ + D I+I LC++
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK-GVRSDGYANSIMISALCRSKRF 393
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
+A ++ ++E D+ ++M+ A C+ ++ ++ MD++ + + + L
Sbjct: 394 KEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHIL 453
Query: 474 IDGFIK 479
I FIK
Sbjct: 454 IKYFIK 459
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL-NAFAVSEQWERAEKFFAYFD 143
++L K D + LF +M R G +P V ++N+LL V + +A +
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ + Y ++ + E+A+ ++ M G P+ + Y +L+N+ + +GD
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A E+ EM G+ P+ + ++ + K G F ++ E+ L N + Y ++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE-LESAGYAENEMPYCML 348
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ GLS+ G+ E+ I++ MK + D + S +I L + A+ + +D
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVISYNIFIK 369
D+V N ML C+ G++E + ++M Q+ S + +++I IK
Sbjct: 409 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ ++L A + + E AE F G SPN+ Y+ L+ K +++KA L+ M
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
+GL P+K TL+ K G + + E+ E+ G + M Y M++DG K+G
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+A +++ ++ + V + + ++MI L R RF E+ E+ + K D+ +++
Sbjct: 360 EARSIFDD-MKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTM 418
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
+ + G ++ R+ K M + VSPD T + ++ K +++ +M G
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGH 478
Query: 359 RNVISYNIFIKGLFENGKVE---EAMNIWELL 387
R + + ++ GK+ EA +++ +L
Sbjct: 479 R--LEEELCSSLIYHLGKIRAQAEAFSVYNML 508
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 22/276 (7%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L A +EA N ++M +V G P + ++SLLN+++ +++A++ +
Sbjct: 242 TVLAICASNGRSEEAENFIQQM-KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS 300
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ PN L+KV K F++++ LL + G ++ Y L++ +K G L
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP--NVVSYNV 262
A +FD+M +GV D +++I +S F +A E+ ET + ++V N
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR---DSETTYEKCDLVMLNT 417
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI--------HGLSQMGNLDGAQRV 314
M+ R G + + ++M + D T+ LI H L+ LD +
Sbjct: 418 MLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSK- 476
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
G R+ ++ C++++ L K E+F ++
Sbjct: 477 -----GHRLEEEL--CSSLIYHLGKIRAQAEAFSVY 505
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 124/292 (42%), Gaps = 39/292 (13%)
Query: 225 NMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
N+I+ F SG + +++E + + + +V +Y+ I+ + S++LEI++ +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKI--SVSTYSSCIKFVG-AKNVSKALEIYQSIP 158
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGK-V 343
K +V+ +S++ L + G LD +++ M + PDVVT N +L G K
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 344 EESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI------------------- 383
++ EL E+ +G + + + Y + NG+ EEA N
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 384 -----W--------ELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
W EL+ + L + L+ K G +++ ++L E E G
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ Y +++ L K +L++A + M +G + + + + +I ++
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRS 390
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 4/353 (1%)
Query: 14 LNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAA 73
L+LLKSE NP L++ + + P Y + + +A + + + + G I+
Sbjct: 46 LSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQ 105
Query: 74 QNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
+ SE + + Y + +M D ++ FR +++ + V+S N+LL A +++ ++
Sbjct: 106 PDPK-SESFAVRAIILYGRANMLDRSIQTFRNLEQ-YEIPRTVKSLNALLFACLMAKDYK 163
Query: 134 RAEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
A + + G+ P++ETYN +I+VLC+ + ++ M ++P S+G +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I+ K + +V M E GV V YN++I K +A + + ++
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR- 282
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
+ PN V+Y+++I G E++ ++E M N K D Y +LIH L + G+ + A
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYN 365
+ ++ + + P ++NGL KV+E+ EL + + +RNV +N
Sbjct: 343 ILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWN 395
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 11/326 (3%)
Query: 144 TAGVSPNVET----YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
+ +SP+ ++V + L +++ F LL + +PD S + A
Sbjct: 64 STSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGF--IQNQPDPKSESFAVRAIILY 121
Query: 200 GD---LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
G L+ +++ F + + + V N ++ + D+ +AN ++ + + + P+
Sbjct: 122 GRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPD 181
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
+ +YN MIR L G S S I M++ K ++ +I G + D ++V +
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENG 375
M V V T N M+ LCK K E+ L + + R N ++Y++ I G
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
++EAMN++E+++ DS Y LIH LCK G AL + E+ +
Sbjct: 302 NLDEAMNLFEVMVC-NGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 436 SSMINALCKERRLDDAAGVVSLMDKR 461
++N L ++D+A +++++ ++
Sbjct: 361 KWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR---FSES 276
D + +++ + + F+ +++ + ++ + P+ S + +R + GR S
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQ---PDPKSESFAVRAIILYGRANMLDRS 130
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVVTCNAMLN 335
++ + +++ E V + ++L+ + A RVY +M + PD+ T N M+
Sbjct: 131 IQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIR 190
Query: 336 GLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
LC+ G S+ + EM + + S+ + I G ++ K +E + ++ E +
Sbjct: 191 VLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM-DEFGVH 249
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
V TY I+I LCK +A +++ + YS +I+ C E LD+A +
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 455 VSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+M G K ++ LI K +
Sbjct: 310 FEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 168/346 (48%), Gaps = 7/346 (2%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS---YGTLINAAAKRGDLNAA 205
P+ E Y VL L + R+F + L M S Y +I AK L A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
F + E G + D YN ++ F G KA E++E + + +++ + +Y ++I
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL-DGSTYELIIP 321
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L++ GR + +++++MK+ + + +SSL+ + + G LD + +VY +M G P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIW 384
++++ K GK++ + LW+EM +SG R N Y + I+ ++GK+E AM ++
Sbjct: 382 SATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVF 441
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ + L S TY L+ +G ++ A+++ + G + +Y S++ L
Sbjct: 442 KDMEKAGFLPTPS-TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
+R +D A ++ M G ++ + L+ +IK++++ L K L
Sbjct: 501 KRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWL 545
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 203/470 (43%), Gaps = 34/470 (7%)
Query: 17 LKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAI----EA 72
LK K +AL LF+ A + P Y S + L +G E
Sbjct: 179 LKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDG-------LNQGRDFVGIQSLFEEM 231
Query: 73 AQNCNCSEDVPLT----LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF-- 126
Q+ + D+ +++ AK + A F+K GC+ +++N+L+ F
Sbjct: 232 VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQES-GCKIDTQTYNNLMMLFLN 290
Query: 127 -----AVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
E +E EK + D + TY ++I L K + A L + M
Sbjct: 291 KGLPYKAFEIYESMEKTDSLLDGS-------TYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
LRP + +L+++ K G L+ +++V+ EM G P + +ID + K+G A
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
+W+ + ++ PN Y ++I ++ G+ ++ +++ M+K TYS L+
Sbjct: 404 RLWDEM-KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRN 360
+ G +D A ++Y M + P + + ++L L V+ + ++ EM G S +
Sbjct: 463 HAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
V + ++ + + ++ V+ A+ W +G + + ++ L KNG + A +L
Sbjct: 523 VCASDVLMIYI-KDASVDLALK-WLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLL 580
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVC 470
E H G VD+ Y+S++ L + + D ++S++ K + +C
Sbjct: 581 ETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMC 630
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 159/301 (52%), Gaps = 4/301 (1%)
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
Y +I+ + K + A + D M R VE + + ++I + ++G +A + R+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM- 212
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ P+ ++++++I LSR R SE+ ++ +K + + DV Y++L+ G + G +
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEI 271
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
A++V+K+M + P+V T + +++ LC+ G++ + +++ +M SG + N I++N
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
++ + G+ E+ + ++ + + D+ TY LI C++ L A++VL +
Sbjct: 332 MRVHVKAGRTEKVLQVYNQM-KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLF 487
+V+ ++++ + K+R ++ A + S M + C+ NT N L+ F+ + + ++
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 488 K 488
K
Sbjct: 451 K 451
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 170/403 (42%), Gaps = 71/403 (17%)
Query: 24 HSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVP 83
H +L F AT Y H S + + ++ A H+I +++ +N S +
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS-RNVEISIETF 189
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGC------------------------------- 112
L++ Y + + EA++ F +M+ +GC
Sbjct: 190 TILIRRYVRAGLASEAVHCFNRMED-YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 113 ---RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
P V + +L+ + + + AEK F AG+ PNV TY+++I LC+ + +
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A + M G P+ ++ L+ K G L+V+++M + G EPD + YN +I+
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 230 GFFKSGDFLKANEMWERLLREE---------TVF-------------------------P 255
+ + A ++ +++++ T+F P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
N V+YN+++R L++ + M E + +V TY L+ MG+ + A +++
Sbjct: 429 NTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 316 KDMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
K+M+ + ++P + +L L + G++++ EL E+M Q G
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 153/325 (47%), Gaps = 4/325 (1%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
YN +I + K R+F+ A L+ M + ++ LI + G + A+ F+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
+ G PD + ++++I + +A ++ L ++ P+V+ Y ++RG R G
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL--KDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
SE+ ++++ MK + +V+TYS +I L + G + A V+ DM+ +P+ +T N +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ K G+ E+ +++ +M + G + I+YN I+ + +E A+ + ++ +
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
V+++T+ + + K +N A ++ + + + Y+ ++ + D
Sbjct: 392 -EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDGF 477
+ MD + + N + L+ F
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMF 475
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 154/339 (45%), Gaps = 37/339 (10%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N +++ Q++ A + V ++ET+ +LI+ + +A M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 179 GVGLRPDKFSYGTLI-NAAAKR---------------------------------GDLNA 204
G PDK ++ +I N + KR G+++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +VF EM G+EP+V Y+++ID + G +A++++ +L + PN +++N ++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-DSGCAPNAITFNNLM 332
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R + GR + L+++ +MKK + D TY+ LI + NL+ A +V MI ++
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
+ T N + + K V + ++ +M ++ N ++YNI ++ +F K + +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR-MFVGSKSTDMVLK 451
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
+ + + + + TY +L+ C G+ N A ++ +E
Sbjct: 452 MKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 185/438 (42%), Gaps = 38/438 (8%)
Query: 8 LSPHRLLNLLKSEKNPH--------------SALQLFQH-------ATRHPGYTHSSAVL 46
L+P LL L+S+ H + L F+H +R TH L
Sbjct: 73 LTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDL 132
Query: 47 QHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFR 104
+L VA++P P + I +C E P+ + + AY + D AL F
Sbjct: 133 YRLLSFVAANPC--PCSSGIF---------SCPELEPIFRSAIDAYCRARKMDYALLAFD 181
Query: 105 KMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK 164
M R+ +P V +N+++N + S ++A +F+ P+V T+N+LI C+
Sbjct: 182 TMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRS 241
Query: 165 REFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCY 224
+F+ A L R M G P+ S+ TLI G + +++ EM E G
Sbjct: 242 SKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATC 301
Query: 225 NMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
+++DG + G A + LL + V P+ Y ++ L + ++E+ E +
Sbjct: 302 EILVDGLCREGRVDDACGLVLDLLNKR-VLPSEFDYGSLVEKLCGENKAVRAMEMMEELW 360
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
K + ++L+ GL + G + A + M+ + PD VT N +L LC
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHST 420
Query: 345 ESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
++ L G + +Y++ + G + G+ +E + +L + L D TY L
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP-DIFTYNRL 479
Query: 404 IHGL-CKNGYLNKALQVL 420
+ GL C + K +++L
Sbjct: 480 MDGLSCTGKFSRKQVRML 497
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 10/339 (2%)
Query: 109 VFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGV----SPNVETYNVLIKVLCKK 164
+F C F S ++A+ + + + A FDT PNV YN ++ K
Sbjct: 150 IFSCPELEPIFRSAIDAYCRARKMDYA---LLAFDTMKRLIDGKPNVGVYNTVVNGYVKS 206
Query: 165 REFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCY 224
+ +KA + M +PD ++ LIN + + AL++F EM E+G EP+V+ +
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSF 266
Query: 225 NMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
N +I GF SG + +M ++ F + + +++ GL R GR ++ + +
Sbjct: 267 NTLIRGFLSSGKIEEGVKMAYEMIELGCRF-SEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
F Y SL+ L A + +++ + +P + C ++ GL K G+ E
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 345 ESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
++ E+M +G + +++N+ ++ L + +A N LL D TTY +L
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLRLLASSKGYEPDETTYHVL 444
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ G K G + ++ E + D+F Y+ +++ L
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 10/296 (3%)
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVE--PDVMCYNMIIDGFFKSGDFLKANEMWER 246
+ + I+A + ++ AL FD M +R ++ P+V YN +++G+ KSGD KA ++R
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 247 LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
+ +E P+V ++N++I G R +F +L+++ MK+ + +V ++++LI G G
Sbjct: 219 MGKERAK-PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL-WEEMGQSGSRNVISYN 365
++ ++ +MI TC +++GLC+ G+V+++ L + + + + Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 366 IFIKGLFENGKVEEAMNIWELLL--GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
++ L K AM + E L G+T + TT L+ GL K+G KA +E+
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT---LVEGLRKSGRTEKASGFMEKM 394
Query: 424 EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ G D ++ ++ LC DA + L +G + + + L+ GF K
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRV--FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
TL+K Y K + + M R P ++ ++++AF + +RA + A
Sbjct: 419 TLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEM 478
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS-GVGLRPDKFSYGTLINAAAKRGD 201
GV N TYNVL+K CK+ + ++A+ LLR M+ G+ PD SY +I+ D
Sbjct: 479 ARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDD 538
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
AL F+EM RG+ P + Y ++ F SG AN +++ ++ + V +++++N
Sbjct: 539 SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWN 598
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+++ G R G ++ + RMK+N +V TY SL +G+SQ A ++K++ R
Sbjct: 599 MLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 117/243 (48%), Gaps = 5/243 (2%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR---PDKFSYGTLINAAAKRGDLNA 204
+P+ Y L+K K +L M R PD+ +Y T+++A G ++
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +V EM+ GV + + YN+++ G+ K +A ++ + + + P+VVSYN++I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR-RV 323
G + +L + M+ +Y++L+ + G A RV+ +M+ RV
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
D++ N ++ G C+ G +E++ + M ++G NV +Y G+ + K +A+
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 383 IWE 385
+W+
Sbjct: 651 LWK 653
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEV 208
P+ TY ++ ++A+ +L M+ +G+ ++ +Y L+ K+ ++ A ++
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 209 FDEMSE-RGVEPDVMCYNMIIDGFFKSGDFLKA----NEMWERLLREETVFPNVVSYNVM 263
EM+E G+EPDV+ YN+IIDG D A NEM R + P +SY +
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM-----RTRGIAPTKISYTTL 564
Query: 264 IRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
++ + G+ + +++ M + R K D+ ++ L+ G ++G ++ AQRV M
Sbjct: 565 MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
P+V T ++ NG+ + K ++ LW+E+ +
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/529 (21%), Positives = 214/529 (40%), Gaps = 89/529 (16%)
Query: 11 HRLLNLLKSEKNPH----SALQLFQHATRHPGYT-HSSAVLQHVLRRVASDPTLLPHAPH 65
+L L++E+ H ++L L A G T ++ +V++ ++R + PH
Sbjct: 136 QSILTRLRNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRS--------GYLPH 187
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLF----RKMDRVFG-------CRP 114
+ A + + S D P+E++ LF R++ R FG RP
Sbjct: 188 VKAWTAAVASLSASGD------------DGPEESIKLFIAITRRVKR-FGDQSLVGQSRP 234
Query: 115 GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL 174
+FN++LNA A ++ K F P+V TYNV+IK+ + E +L
Sbjct: 235 DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVL 294
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE---------------- 218
+ G++ + +L+ A GDL A + M E+ +
Sbjct: 295 ERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEK 354
Query: 219 ----------------------PDVMCYNMIIDGFFKSGDFLKANEM---WERLLREETV 253
D + ++D F K L N + E L +
Sbjct: 355 EEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKK----LLPNSVDPSGEPPLLPKVF 410
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH---DVFTYSSLIHGLSQMGNLDG 310
P+ Y +++G + GR +++ + E M++ + ++ D TY++++ G +D
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--SRNVISYNIFI 368
A++V +M V + +T N +L G CK +++ + +L EM + +V+SYNI I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G A+ + + +A +Y L+ +G A +V +E +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTR-GIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 429 -DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
VD+ A++ ++ C+ ++DA VVS M + G N L +G
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG 638
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREE--TVFPNVVSYNVMIRGLSRCGRFSES 276
PD Y ++ G+ K+G M E + R++ P+ V+Y ++ G +
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI-GRRVSPDVVTCNAMLN 335
++ M + + TY+ L+ G + +D A+ + ++M + PDVV+ N +++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 336 GLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
G + + EM G + ISY +K +G+ + A +++ ++ + +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
VD + +L+ G C+ G + A +V+ + G +V Y S+ N + + R+ DA
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 52/309 (16%)
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
RPD ++ ++NA A GD + ++F+EMSE EPD
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPD---------------------- 270
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
V++YNVMI+ +R GR + + ER+ K + T SL+
Sbjct: 271 --------------VLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAY 316
Query: 303 SQMGNLDGAQRVYKDMIGRR--VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--S 358
G+L A+R+ + M +R + + CNA + + E+ + +E+ SG +
Sbjct: 317 VGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSA 376
Query: 359 RNVIS----YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
R+ +S ++F K L N E L A DS Y L+ G KNG +
Sbjct: 377 RDEVSEEGVVDVF-KKLLPNSVDPSG----EPPLLPKVFAPDSRIYTTLMKGYMKNGRVA 431
Query: 415 KALQVLE---EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCN 471
++LE + R D Y+++++A +D A V++ M + G N N
Sbjct: 432 DTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYN 491
Query: 472 PLIDGFIKN 480
L+ G+ K
Sbjct: 492 VLLKGYCKQ 500
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 102/525 (19%), Positives = 207/525 (39%), Gaps = 60/525 (11%)
Query: 11 HRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAI 70
LL LL++ K + + Q +T PG T S ++ + S P L A I+ +
Sbjct: 86 QELLFLLRNRKTDEAWAKYVQ-STHLPGPTCLSRLVSQL--SYQSKPESLTRAQSILTRL 142
Query: 71 EAAQNCNCSEDVPLTLLK-AYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS 129
+ + + L LL A AK A+++ + M R G P V+++ + + + + S
Sbjct: 143 RNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRS-GYLPHVKAWTAAVASLSAS 201
Query: 130 --EQWERAEKFFA--------YFDTAGVS---PNVETYNVLIKVLCKKREFEKAKGLLRW 176
+ E + K F + D + V P+ +N ++ + +K L
Sbjct: 202 GDDGPEESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEE 261
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
MS PD +Y +I A+ G + V + + ++G++ + + ++ + GD
Sbjct: 262 MSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGD 321
Query: 237 FLKANEMWE----------RLLRE------------ETVFPNVVSYNVMIRGLSRCGRFS 274
A + + ++LRE E + G S S
Sbjct: 322 LRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVS 381
Query: 275 ES--LEIWERMKKNERK-------------HDVFTYSSLIHGLSQMGNLDGAQRVYKDM- 318
E +++++++ N D Y++L+ G + G + R+ + M
Sbjct: 382 EEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMR 441
Query: 319 --IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENG 375
R PD VT +++ G ++ + ++ EM + G N I+YN+ +KG +
Sbjct: 442 RQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQL 501
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
+++ A ++ + + + D +Y I+I G AL E RG +Y
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISY 561
Query: 436 SSMINALCKERRLDDAAGVVS-LMDKRGCKLNTHVCNPLIDGFIK 479
++++ A + A V +M+ K++ N L++G+ +
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCR 606
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 108 RVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREF 167
+ F RP S+N++L++ +Q++ + + G +P+V TYN+++ + +
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 168 EKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMI 227
++ LL M G PD ++Y L++ A AAL + + M E GVEP V+ + +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 228 IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
IDG ++G + ++ P+VV Y VMI G G ++ E+++ M +
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCT-PDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+ +VFTY+S+I G G A + K+M R +P+ V + ++N L GKV E+
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 348 ELWEEMGQSG 357
E+ ++M + G
Sbjct: 453 EVVKDMVEKG 462
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 9/257 (3%)
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
V EQ+ +++ F P +YN ++ L ++++ + M G PD
Sbjct: 206 VVEQFIKSKTF-------NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVL 258
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
+Y ++ A + G + + DEM + G PD+ YN+++ L A + +
Sbjct: 259 TYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHM 318
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
RE V P V+ + +I GLSR G+ + K DV Y+ +I G G
Sbjct: 319 -REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNI 366
L+ A+ ++K+M + P+V T N+M+ G C GK +E+ L +EM G N + Y+
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 367 FIKGLFENGKVEEAMNI 383
+ L GKV EA +
Sbjct: 438 LVNNLKNAGKVLEAHEV 454
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 9/327 (2%)
Query: 163 KKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
K R + A W G R Y L+ A+ G+ A + DEM + G
Sbjct: 128 KTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTA 187
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETV--FPNVVSYNVMIRGLSRCGRFSESLEI 279
+N++I G+ A ++ E+ ++ +T P SYN ++ L ++ +
Sbjct: 188 CTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWV 244
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
+E+M ++ DV TY+ ++ ++G D R+ +M+ SPD+ T N +L+ L
Sbjct: 245 YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 340 WGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
K + L M + G VI + I GL GK+E + + + D
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETV-KVGCTPDVV 363
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
Y ++I G G L KA ++ +E +G +VF Y+SMI C + +A ++ M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNLTL 485
+ RGC N V + L++ +KN+ L
Sbjct: 424 ESRGCNPNFVVYSTLVNN-LKNAGKVL 449
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 146/310 (47%), Gaps = 3/310 (0%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
Y++L+K+ + E++ L+ M G ++ LI + G +E F +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
P YN I+ + + ++E++L E+ P+V++YN+++ R G+
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKT 273
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
+ + M K+ D++TY+ L+H L+ A + M V P V+ +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 334 LNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
++GL + GK+E +E + G + +V+ Y + I G G++E+A +++ + +
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
L + TY +I G C G +A +L+E E RG + + YS+++N L ++ +A
Sbjct: 394 LP-NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 453 GVVSLMDKRG 462
VV M ++G
Sbjct: 453 EVVKDMVEKG 462
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL A + P ALNL M V G PGV F +L++ + + + E + F
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREV-GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G +P+V Y V+I E EKA+ + + M+ G P+ F+Y ++I G A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
+ EM RG P+ + Y+ +++ +G L+A+E+ + ++ +
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA F GC P V + ++ + + E+AE+ F G PNV TYN +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
I+ C +F++A LL+ M G P+ Y TL+N G + A EV +M E+G
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 155/316 (49%), Gaps = 10/316 (3%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
G +R NS+L +A + + A KFF +V +N ++ C+ + E+
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEE 265
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A L++ M G+ P ++ LI + G +AA+++ +M G+ DV + +I
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
G +G +A +M+ ++ V PN V+ + S ++ E+ K
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
DV +SL+ S+ G L+ A++V+ + + DV T N+M+ G C+ G +++EL
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+ M + R N+I++N I G +NG EAM++++ + + + ++ T+ ++I G
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 409 KNGYLNKALQVLEEAE 424
+NG ++AL++ + +
Sbjct: 501 QNGKKDEALELFRKMQ 516
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 12/305 (3%)
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
V ++L YAK D A FR+M V ++NS+L A+ + + E A +
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRE-----RDVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+ G+SP + T+N+LI + + + A L++ M G+ D F++ +I+ G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
AL++F +M GV P+ + + + +E+ + + +V+ N
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGN 391
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++ S+CG+ ++ ++++ +K DV+T++S+I G Q G A ++ M
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--SRNVISYNIFIKGLFENGKVEE 379
+ P+++T N M++G K G E+ +L++ M + G RN ++N+ I G +NGK +E
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 380 AMNIW 384
A+ ++
Sbjct: 508 ALELF 512
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 188/401 (46%), Gaps = 17/401 (4%)
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
V LL YAK +A +F M + ++++++ A++ +W K F
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRE-----RNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
GV P+ + +++ + E K + + +G+ +++ AK G+
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
L+ A + F M ER DV+ +N ++ + ++G +A E+ + + +E + P +V++N
Sbjct: 232 LDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEM-EKEGISPGLVTWN 286
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
++I G ++ G+ ++++ ++M+ DVFT++++I GL G A +++ M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEA 380
V P+ VT + ++ + + E+ + G +V+ N + + GK+E+A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+++ + + D T+ +I G C+ GY KA ++ + ++ +++MI+
Sbjct: 407 RKVFDSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 441 ALCKERRLDDAAGVVSLMDKRG-CKLNTHVCNPLIDGFIKN 480
K +A + M+K G + NT N +I G+I+N
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 13/307 (4%)
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
G+ PD F L++ AK G + A +VFD M ER ++ ++ +I + + +
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWR 163
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+ +++ RL+ ++ V P+ + +++G + CG I + K + +S+
Sbjct: 164 EVAKLF-RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSI 222
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG- 357
+ ++ G LD A + ++ M R DV+ N++L C+ GK EE+ EL +EM + G
Sbjct: 223 LAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET-ALAVDSTTYGILIHGLCKNGYLNKA 416
S ++++NI I G + GK + AM++ + + ET + D T+ +I GL NG +A
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKM--ETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 417 LQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDG 476
L + + G + S ++A + ++ + V S+ K G + V N L+D
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 477 FIKNSNL 483
+ K L
Sbjct: 397 YSKCGKL 403
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 151/317 (47%), Gaps = 9/317 (2%)
Query: 95 MPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
M +AL++FRKM + G P + S ++A + + + + + G +V
Sbjct: 332 MRYQALDMFRKM-FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG 390
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
N L+ + K + E A+ + + D +++ ++I + G A E+F M +
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFS 274
+ P+++ +N +I G+ K+GD +A ++++R+ ++ V N ++N++I G + G+
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 275 ESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
E+LE++ +M+ + + T SL+ + + + ++ ++ R + NA+
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALT 566
Query: 335 NGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
+ K G +E S ++ M ++++I++N I G +G A+ ++ + +
Sbjct: 567 DTYAKSGDIEYSRTIFLGM---ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITP 623
Query: 395 VDSTTYGILI-HGLCKN 410
T I++ HGL N
Sbjct: 624 NRGTLSSIILAHGLMGN 640
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 14/308 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ Y + +A LF +M RP + ++N++++ + + A F +
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDA-NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 145 AG-VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G V N T+N++I + + ++A L R M P+ + +L+ A A
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
E+ + R ++ N + D + KSGD + ++ L ET +++++N +
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF---LGMET--KDIITWNSL 596
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI--HGLSQMGNLDGAQRVYKDMIG- 320
I G G + +L ++ +MK + T SS+I HGL MGN+D ++V+ +
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL--MGNVDEGKKVFYSIAND 654
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
+ P + C+AM+ + ++EE+ + +EM + + F+ G +G ++ A
Sbjct: 655 YHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPI--WESFLTGCRIHGDIDMA 712
Query: 381 MNIWELLL 388
++ E L
Sbjct: 713 IHAAENLF 720
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 85 TLLKAYAK----RSMPDEALNLFRKMDRVFGCRPGVRSFNSLL----NAFAVSEQWE-RA 135
TLL+ Y K + +EA+ ++ + + G V + NS+L A + WE
Sbjct: 146 TLLEQYVKCLSEEGLVEEAIEVYNVLKDM-GISSSVVTCNSVLLGCLKARKLDRFWELHK 204
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
E + FD+ E LI+ LC + + LL+ GL P ++ Y LI+
Sbjct: 205 EMVESEFDS-------ERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
+ G+ EV M P + Y II G + L+A +++ L +++ P
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL-KDKGYAP 316
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+ V Y MIRG G + ++W M K + + F Y+ +IHG + G + + Y
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFEN 374
+M+ +++CN M+ G C GK +E+FE+++ M ++G + N I+YN IKG +
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
KVE+ + +++ L L Y L+ L
Sbjct: 437 NKVEKGLKLYKELKA-LGLKPSGMAYAALVRNL 468
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 5/311 (1%)
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTL 192
E A + + G+S +V T N ++ K R+ ++ L + M V D L
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM--VESEFDSERIRCL 219
Query: 193 INAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET 252
I A GD++ E+ + ++G++P Y +I GF + G++ +E+ ++
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 253 VFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
FP++ Y +I+GL + E+ I++ +K D Y+++I G + G L A+
Sbjct: 280 -FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGL 371
+++ +MI + + P+ N M++G K G++ + EM ++G ++S N IKG
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+GK +EA I++ + ET + ++ TY LI G CK + K L++ +E + G
Sbjct: 399 CSHGKSDEAFEIFKNM-SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 432 VFAYSSMINAL 442
AY++++ L
Sbjct: 458 GMAYAALVRNL 468
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 12/339 (3%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
+P + N+L L + + AK L G +P+ + ++ G + A+E
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFL---DTTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV--MIR 265
V++ + + G+ V+ N ++ G K+ K + WE L +E V S + +IR
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKA---RKLDRFWE--LHKEMVESEFDSERIRCLIR 221
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L G SE E+ ++ K + Y+ LI G ++GN V MI P
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW 384
+ ++ GLC K E++ +++ + G + + + Y I+G E G + A +W
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
++ + + + Y ++IHG K G ++ E G + + ++MI C
Sbjct: 342 FEMI-KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
+ D+A + M + G N N LI GF K + +
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 158/372 (42%), Gaps = 18/372 (4%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
+L FR + + PG S N L A + + A+ F DT G P +
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFL---DTTGFKPEPTLLEQYV 152
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
K L ++ E+A + + +G+ + +++ K L+ E+ EM E +
Sbjct: 153 KCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFD 212
Query: 219 PD-VMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+ + C +I GD + E+ ++ L++ + P Y +I G G ++
Sbjct: 213 SERIRC---LIRALCDGGDVSEGYELLKQGLKQ-GLDPGQYVYAKLISGFCEIGNYACMS 268
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
E+ M ++ Y +I GL A ++K++ + +PD V M+ G
Sbjct: 269 EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGF 328
Query: 338 CKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLL----GETA 392
C+ G + + +LW EM + G R N +YN+ I G F+ G++ + +L G T
Sbjct: 329 CEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTM 388
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
L+ ++ +I G C +G ++A ++ + G + Y+++I CKE +++
Sbjct: 389 LSCNT-----MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGL 443
Query: 453 GVVSLMDKRGCK 464
+ + G K
Sbjct: 444 KLYKELKALGLK 455
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 4/224 (1%)
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
++ LS G E++E++ +K V T +S++ G + LD ++K+M+
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMN 382
+ + C ++ LC G V E +EL ++ + Q Y I G E G
Sbjct: 212 DSERIRC--LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ ++ Y +I GLC N +A + + + +G D Y++MI
Sbjct: 270 VLHTMIAWNHFP-SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGF 328
Query: 443 CKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLL 486
C++ L A + M K+G + N N +I G K ++L+
Sbjct: 329 CEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLV 372
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 85/379 (22%)
Query: 129 SEQWERAEKFFAYFDT-AGVSPNVETYNVLIKVLCKKREF-------------EKAK--- 171
S W +A FF + ++ G + TYN ++ VL K R F E++K
Sbjct: 143 SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVT 202
Query: 172 ----------------------GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
L G++ D + +L++A K + A EVF
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262
Query: 210 ----------------------------------DEMSERGVEPDVMCYNMIIDGFFKSG 235
D M PDV+ Y ++ + K G
Sbjct: 263 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
DF + NEM E +RE PNVV+Y +++ L + + +E+L ++E+MK++ D Y
Sbjct: 323 DFRRVNEMLEE-MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-- 353
SSLIH LS+ G A +++DM + V DV+ N M++ + E + L + M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 354 --GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLC 408
G+S S NV +Y L + ++ M + +LL +++D +TY +LI GLC
Sbjct: 442 EEGESCSPNVETY----APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLC 497
Query: 409 KNGYLNKALQVLEEAEHRG 427
+G + +A EEA +G
Sbjct: 498 MSGKVEEACLFFEEAVRKG 516
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 8/277 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+L+ A K + + A +F K+ D + +P R+FN L++ F + +++ A
Sbjct: 244 SLMDALVKENSIEHAHEVFLKLFDTI---KPDARTFNILIHGFCKARKFDDARAMMDLMK 300
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+P+V TY ++ CK+ +F + +L M G P+ +Y ++++ K +
Sbjct: 301 VTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
AL V+++M E G PD Y+ +I K+G F A E++E + + V +V+ YN M
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN-QGVRRDVLVYNTM 419
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKH---DVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
I R +L + +RM+ E + +V TY+ L+ + + M+
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
VS DV T ++ GLC GKVEE+ +EE + G
Sbjct: 480 NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF--TYSSLIHGLSQMGNLDGAQRVYK 316
+YN M+ L +C F E+ M KNE V T S ++ L++ G + A +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 317 DMIGRR-VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENG 375
+M V D + N++++ L K +E + E++ ++ + + ++NI I G +
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKAR 287
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY 435
K ++A + + L+ T D TY + CK G + ++LEE G + +V Y
Sbjct: 288 KFDDARAMMD-LMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
+ ++++L K +++ +A GV M + GC + + LI
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 201/474 (42%), Gaps = 34/474 (7%)
Query: 7 PLSPHRLL-NLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
P H L+ N+L K ALQ F+ R H +++ + + + L HA
Sbjct: 113 PEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLG-EVSKLNHARC 171
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
I+ + + ED+ + L+++Y K + E++ +F+KM + G ++S+NSL
Sbjct: 172 ILLDM-PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM-KDLGVERTIKSYNSLFKV 229
Query: 126 FAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPD 185
++ A+++F + GV P TYN+++ E A M G+ PD
Sbjct: 230 ILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPD 289
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
++ T+IN + ++ A ++F EM + P V+ Y +I G+ ++E
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER-MKKNERKHDVFTYSSLIHGLSQ 304
+R + PN +Y+ ++ GL G+ E+ I + M K+ D + L+ S+
Sbjct: 350 E-MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISY 364
G++ A V K M V + ++ CK +Y
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKAS---------------------AY 447
Query: 365 NIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE 424
N IK L + +E+ + +L + L ++ + Y +I LC NG KA + +
Sbjct: 448 NRAIKLL--DTLIEKEI----ILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
RG D A +++I KE D + ++ +M +RG ++ LI ++
Sbjct: 502 KRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYM 554
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 185/446 (41%), Gaps = 51/446 (11%)
Query: 5 PKPLSPHRLLNL-LKSEKNPHSALQLFQHATRHP---GYTHSSAVLQHVLRRVASDPTLL 60
P +P + + L NPH +L+ F R+ THS + L H+L R L
Sbjct: 66 PSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSR----SRLK 121
Query: 61 PHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFG-CRPGVRSF 119
HA II L+ A D L +FR + + + C F
Sbjct: 122 SHASEIIR----------------LALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVF 165
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
+ L+ + S++ + A + G++ + T N LI + ++R + R + G
Sbjct: 166 DLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFG 225
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
+ D S K ++P+ +N ++ F++ G+
Sbjct: 226 L----DDVSVDEAKKMIGK------------------IKPNATTFNSMMVSFYREGETEM 263
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
+W + E PNV SYNV++ G SE+ ++WE MK +D+ Y+++I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-S 358
GL + A+ +++DM + + +T ++NG CK G V+ ++ EM + G
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 359 RNVISYNIFIKGLFEN---GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
+ ++ ++GL ++ +V EA +I + + E Y +L+ LC++G +++
Sbjct: 384 ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDR 443
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINA 441
AL + E +G Y + I+
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 102 LFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVL 161
++R+M+ GC P V S+N L+ A+ AEK + GV ++ YN +I L
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 162 CKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
C E KAK L R M G+ +Y L+N K GD+++ L V+ EM +G E D
Sbjct: 327 CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADG 386
Query: 222 MCYNMIIDGFFKSGD---FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
+ +++G D ++A ++ + +RE +P+ Y ++++ L G+ +L
Sbjct: 387 LTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALN 446
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGN 307
I M K TY + I G +G+
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%), Gaps = 10/174 (5%)
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDM---IGRRVSPDVVTCNAMLNGLCKWGKVEE 345
K + T++S++ + G + +R++++M +G SP+V + N ++ C G + E
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVG--CSPNVYSYNVLMEAYCARGLMSE 299
Query: 346 SFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ ++WEEM G ++++YN I GL N +V +A ++ + G + TY L+
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM-GLKGIECTCLTYEHLV 358
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKER---RLDDAAGVV 455
+G CK G ++ L V E + +G + D +++ LC +R R+ +AA +V
Sbjct: 359 NGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS--GSRNVISYNIFIKGLFE 373
K MIG+ + P+ T N+M+ + G+ E +W EM + S NV SYN+ ++
Sbjct: 235 KKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCA 293
Query: 374 NGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVF 433
G + EA +WE + + D Y +I GLC N + KA ++ + +G +
Sbjct: 294 RGLMSEAEKVWEEM-KVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 434 AYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
Y ++N CK +D V M ++G + + L++G + +
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
F + LI +DGA V + + R ++ + TCNA++ + + ++++ E
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222
Query: 353 --------------MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
M N ++N + + G+ E IW + E + +
Sbjct: 223 VFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
+Y +L+ C G +++A +V EE + RG D+ AY++MI LC + A + M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 459 DKRGCKLNTHVCNPLIDGFIKNSNL 483
+G + L++G+ K ++
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDV 367
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N L+ A+ V Q + + G+ P+ T+N + + L
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
G D F TLI A AK G L A VFDEMS+R DV +N +I G+ + GD
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMK 165
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSS 297
A E+++ + R+ NV S+ +I G S+ G +SE+L+++ M+K++ K + T S
Sbjct: 166 AAMELFDSMPRK-----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
++ + +G L+ +R+ ++ CNA + K G ++ + L+EE+G
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN-- 278
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
RN+ S+N I L +GK +EA+ ++ +L E D+ T+ L+ G + K
Sbjct: 279 QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQ 337
Query: 418 QVLEEAE--HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
++ + E H+ + Y MI+ L + +L +A ++ M
Sbjct: 338 ELFKSMEEVHKISP-KLEHYGCMIDLLGRVGKLQEAYDLIKTM 379
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 189/408 (46%), Gaps = 20/408 (4%)
Query: 51 RRVASDPT--LLPHAPHIIGAIEAA-------QNCNCS-EDVPLTLLKAY-----AKRSM 95
R V ++ T LL A + G IE A QN + S + + +T+ AY ++
Sbjct: 207 RYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGN 266
Query: 96 PDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYN 155
+EA+++F++M R C+P ++N ++N + + + + K + + PN+ TY
Sbjct: 267 TEEAIDVFQRMKRD-RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 325
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
L+ ++ EKA+ + + GL PD + Y L+ + ++ G A E+F M
Sbjct: 326 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
G EPD YN+++D + ++G A ++E + R + P + S+ +++ S+ ++
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
I + M +N + D F +S+++ ++G +++ +M + D+ T N ++N
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 336 GLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
K G +E EL+ E+ + R +V+++ I + + ++E ++ ++ A
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-DSGCA 563
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
D T +L+ + + VL H+G V M +L
Sbjct: 564 PDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLMAKSL 610
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 44/392 (11%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
+P V FN L++A+ Q++ AE + + P +TY +LIK C E+A+
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 173 LLRWMSGVGLRPDKFS---YGTLINAAAKR-GDLNAALEVFDEMSERGVEPDVMCYNMII 228
+L M + P Y I KR G+ A++VF M +P YN++I
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 229 DGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+ + K+ K+ W+ +R PN+ +Y ++ +R G ++ EI+E+++++
Sbjct: 294 NLYGKAS---KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
+ DV+ Y++L+ S+ G GA ++ M PD + N M++ + G ++
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 347 FELWEEMGQSG-----------------SRNVISYNIFIKGLFENG------KVEEAMNI 383
++EEM + G +R+V +K + ENG + +N+
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 384 W---------ELLLGET---ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ E +L E D +TY ILI+ K G+L + ++ E + + D
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
V ++S I A +++ V M GC
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 238 LKANEMW-------ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
L+ N+ W E +LR+ + P+V+ +N++I + ++ E+ ++ ++ ++
Sbjct: 151 LRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP 210
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD---VVTCNAMLNGLCKW-GKVEES 346
TY+ LI G ++ A+ V +M VSP V NA + GL K G EE+
Sbjct: 211 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 270
Query: 347 FELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGIL 403
++++ M + + +YN+ I L+ GK ++ W+L + + TY L
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMI-NLY--GKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
++ + G KA ++ E+ + G + DV+ Y++++ + + AA + SLM GC
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 464 KLNTHVCNPLIDGF 477
+ + N ++D +
Sbjct: 388 EPDRASYNIMVDAY 401
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 189/408 (46%), Gaps = 20/408 (4%)
Query: 51 RRVASDPT--LLPHAPHIIGAIEAA-------QNCNCS-EDVPLTLLKAY-----AKRSM 95
R V ++ T LL A + G IE A QN + S + + +T+ AY ++
Sbjct: 185 RYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGN 244
Query: 96 PDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYN 155
+EA+++F++M R C+P ++N ++N + + + + K + + PN+ TY
Sbjct: 245 TEEAIDVFQRMKRD-RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
L+ ++ EKA+ + + GL PD + Y L+ + ++ G A E+F M
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
G EPD YN+++D + ++G A ++E + R + P + S+ +++ S+ ++
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
I + M +N + D F +S+++ ++G +++ +M + D+ T N ++N
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 336 GLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
K G +E EL+ E+ + R +V+++ I + + ++E ++ ++ A
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-DSGCA 541
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
D T +L+ + + VL H+G V M +L
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLMAKSL 588
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 44/392 (11%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
+P V FN L++A+ Q++ AE + + P +TY +LIK C E+A+
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 173 LLRWMSGVGLRPDKFS---YGTLINAAAKR-GDLNAALEVFDEMSERGVEPDVMCYNMII 228
+L M + P Y I KR G+ A++VF M +P YN++I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 229 DGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+ + K+ K+ W+ +R PN+ +Y ++ +R G ++ EI+E+++++
Sbjct: 272 NLYGKAS---KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
+ DV+ Y++L+ S+ G GA ++ M PD + N M++ + G ++
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 347 FELWEEMGQSG-----------------SRNVISYNIFIKGLFENG------KVEEAMNI 383
++EEM + G +R+V +K + ENG + +N+
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 384 W---------ELLLGET---ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ E +L E D +TY ILI+ K G+L + ++ E + + D
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
V ++S I A +++ V M GC
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 43/337 (12%)
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C + + ++ Y K S + L+ +M R C+P + ++ +L+NAFA E+A
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
E+ F G+ P+V YN L++ + A + M +G PD+ SY +++A
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 196 AAKRG---DLNAALE--------------------------------VFDEMSERGVEPD 220
+ G D A E + EMSE GVEPD
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 221 VMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP---NVVSYNVMIRGLSRCGRFSESL 277
N +++ + + G F K E++L E P ++ +YN++I + G
Sbjct: 439 TFVLNSMLNLYGRLGQFTKM----EKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
E++ +K+ + DV T++S I S+ V+++MI +PD T +L+
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Query: 338 CKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFEN 374
+VE+ + M + + + + + K L N
Sbjct: 555 SSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKSLTVN 591
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 238 LKANEMW-------ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
L+ N+ W E +LR+ + P+V+ +N++I + ++ E+ ++ ++ ++
Sbjct: 129 LRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP 188
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD---VVTCNAMLNGLCKW-GKVEES 346
TY+ LI G ++ A+ V +M VSP V NA + GL K G EE+
Sbjct: 189 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 248
Query: 347 FELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWELL--LGETALAVDSTTYGIL 403
++++ M + + +YN+ I L+ GK ++ W+L + + TY L
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMI-NLY--GKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
++ + G KA ++ E+ + G + DV+ Y++++ + + AA + SLM GC
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 464 KLNTHVCNPLIDGF 477
+ + N ++D +
Sbjct: 366 EPDRASYNIMVDAY 379
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 166/375 (44%), Gaps = 7/375 (1%)
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
V L+KAYA M DEA+++F + G P +++ N L++ S + + FF
Sbjct: 148 VSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
+ G+ + TY ++++ L + + E+ + LL + R Y I
Sbjct: 208 IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQM 267
Query: 202 LNAALEVFDEMSERGVEPDV----MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
+ A + + + + D + Y ++ G A + + + + P+V
Sbjct: 268 TDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDM-EKHGIDPDV 326
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
Y+ +I G + ++++++ +M K ++ + SS++ QMGN A ++K+
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE 386
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGK 376
+S D V N + L K GKVEE+ EL+ EM G+ + +VI+Y I G GK
Sbjct: 387 FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+A ++ + G T D Y +L GL NG +A + L+ E+RG ++
Sbjct: 447 CSDAFDLMIEMDG-TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHN 505
Query: 437 SMINALCKERRLDDA 451
+I L LD A
Sbjct: 506 MVIEGLIDAGELDKA 520
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 152/314 (48%), Gaps = 18/314 (5%)
Query: 153 TYNVLIKVLCKKREF-EKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
Y L LC ++++ KA+ LL M +G+ P+K YG LI A + ++ A E F+
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
+ + + PD+ Y ++I+ + + + +A ++E + R + V P+VV+Y+V++
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD-VKPDVVTYSVLLNS----- 679
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
L++ M+ + DV Y+ +I+ + +L ++KDM R + PDVVT
Sbjct: 680 --DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
+L K + L EM + +V Y + I + G + EA I++ ++ E
Sbjct: 738 VLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMI-E 789
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
+ + D+ Y LI CK GYL +A + + G DV Y+++I C+ +
Sbjct: 790 SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLK 849
Query: 451 AAGVVSLMDKRGCK 464
A +V M ++G K
Sbjct: 850 AVKLVKEMLEKGIK 863
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 180/413 (43%), Gaps = 47/413 (11%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
+A +L +MD G P + +N L A + + A + + GV P T+N++
Sbjct: 449 DAFDLMIEMDGT-GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 158 IKVLCKKREFEKAKG---------------LLRWMSGVGLRPDKFS-------------Y 189
I+ L E +KA+ +++ G F Y
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVY 567
Query: 190 GTLINA-AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
TL + A++ ++ A ++ D M + GVEP+ Y +I + + + KA E +E L+
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
++ V P++ +Y +MI R ++ ++E MK+ + K DV TYS L+ N
Sbjct: 628 TKKIV-PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NS 679
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIF 367
D + ++M V PDVV M+N C +++ + L+++M + +V++Y +
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+K E E M +++ D Y +LI CK G L +A ++ ++ G
Sbjct: 740 LKNKPERNLSRE-MKAFDV-------KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
D D Y+++I CK L +A + M + G K + LI G +N
Sbjct: 792 VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 191/460 (41%), Gaps = 61/460 (13%)
Query: 17 LKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGA-IEAAQN 75
++ E L + +H Y +S+ + H R+ + +P A + ++ +
Sbjct: 305 MRIEDAESVVLDMEKHGIDPDVYVYSAIIEGH--RKNMN----IPKAVDVFNKMLKKRKR 358
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRK-------MDRVFGCRPGVRSFNSLLNAFAV 128
NC + ++L+ Y + EA +LF++ +DRV +N +A
Sbjct: 359 INCV--IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV--------CYNVAFDALGK 408
Query: 129 SEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFS 188
+ E A + F G++P+V Y LI C + + A L+ M G G PD
Sbjct: 409 LGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVI 468
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW---- 244
Y L A G A E M RGV+P + +NM+I+G +G+ KA +
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 245 ------------------------ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIW 280
ER +R E P V + + + S++ ++
Sbjct: 529 HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 281 ERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKW 340
+RM K + + Y LI ++ N+ A+ ++ ++ +++ PD+ T M+N C+
Sbjct: 589 DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 341 GKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT 399
+ ++++ L+E+M + + +V++Y++ + E E M ++++ D
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE-MEAFDVI-------PDVVY 700
Query: 400 YGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
Y I+I+ C L K + ++ + R DV Y+ ++
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 172/380 (45%), Gaps = 20/380 (5%)
Query: 116 VRSFNSLLNAFAVSEQWERA-EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL 174
+R +L+ A+A + ++ A + FF + + G +P+++ N LI + + G
Sbjct: 146 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
+ +GL D +Y ++ A + D ++ + + Y I+G
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEG---- 261
Query: 235 GDFLKANEMWE------RLLREETVFPNV----VSYNVMIRGLSRCGRFSESLEIWERMK 284
L N+M + + LR+ + + ++Y ++RGL R ++ + M+
Sbjct: 262 ---LCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDME 318
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
K+ DV+ YS++I G + N+ A V+ M+ +R + V +++L C+ G
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFS 378
Query: 345 ESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
E+++L++E ++ S + + YN+ L + GKVEEA+ ++ + G+ +A D Y L
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK-GIAPDVINYTTL 437
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
I G C G + A ++ E + G D+ Y+ + L +A + +M+ RG
Sbjct: 438 IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGV 497
Query: 464 KLNTHVCNPLIDGFIKNSNL 483
K N +I+G I L
Sbjct: 498 KPTYVTHNMVIEGLIDAGEL 517
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
A++ +A +L +M ++ G P + L+ A+ +A +FF T + P+
Sbjct: 576 AEKDYISKAQDLLDRMWKL-GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
+ TY ++I C+ E ++A L M ++PD +Y L+N+ + D+ +E FD
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL-DMKREMEAFD 693
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI-----R 265
V PDV+ Y ++I+ + D K +++ + R E V P+VV+Y V++ R
Sbjct: 694 ------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV-PDVVTYTVLLKNKPER 746
Query: 266 GLSR-----------------------CGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
LSR G E+ I+++M ++ D Y++LI
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
+MG L A+ ++ MI V PDVV A++ G C+ G V ++ +L +EM + G +
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 23/359 (6%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
+S+L + + A F F +S + YNV L K + E+A L R M+G
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G+ PD +Y TLI +G + A ++ EM G PD++ YN++ G +G
Sbjct: 425 KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG---L 481
Query: 240 ANEMWE--RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
A E +E +++ V P V++N++I GL G ++ +E ++ R++D +S
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----AS 537
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC-KWGKVEESFELWEEMGQS 356
++ G G LD A ++ I + LC + + ++ +L + M +
Sbjct: 538 MVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 357 GSRNVIS-YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
G S Y I V +A +E+L+ + + D TY I+I+ C+ +
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK-IVPDLFTYTIMINTYCRLNEPKQ 653
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINA---LCKERRL---DDAAGVV--SLMDKRGCKLN 466
A + E+ + R DV YS ++N+ L +R + D VV ++M R C LN
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ Y + + P +A LF M R +P V +++ LLN+ + E F
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRR-DVKPDVVTYSVLLNSDPELDMKREMEAF------- 692
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
V P+V Y ++I C + +K L + M + PD +Y L+ +R +L+
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER-NLSRE 751
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++ FD V+PDV Y ++ID K GD +A ++++++ E V P+ Y +I
Sbjct: 752 MKAFD------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMI-ESGVDPDAAPYTALIA 804
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+ G E+ I++RM ++ K DV Y++LI G + G + A ++ K+M+ + + P
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Query: 326 DVVTCNAM 333
+ +A+
Sbjct: 865 TKASLSAV 872
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 12/348 (3%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GV+P++E + + + +A L G++ S+ L+ +R ++AA
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 206 LEVFDEMSERGVEP-DVMCYNMIIDGFFKSGDFLKANEMWERLLRE--ETVF-PNVVSYN 261
VF+ +++G P D YN++I G+ K G+ E E++L+E E+ F P+ +SY+
Sbjct: 241 KSVFN--AKKGNIPFDSCSYNIMISGWSKLGEV----EEMEKVLKEMVESGFGPDCLSYS 294
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+I GL R GR ++S+EI++ +K D Y+++I + D + R Y+ M+
Sbjct: 295 HLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDE 354
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS-YNIFIKGLFENGKVEEA 380
P++ T + +++GL K KV ++ E++EEM G F+K L G A
Sbjct: 355 ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAA 414
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
M I++ + + + Y +L+ L + G L V +E + G DV Y +++
Sbjct: 415 MVIYQ-KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
LC L++A V+ ++G N V + L + ++ L +K
Sbjct: 474 GLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYK 521
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G+ D SY ++ A +R + ++V M GV PD+ C + +D F + +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
E++E V + S+N ++R L S + ++ KK D +Y+ +I
Sbjct: 206 IELFEE-SESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMIS 263
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-- 358
G S++G ++ ++V K+M+ PD ++ + ++ GL + G++ +S E+++ + G+
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 359 -RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
NV YN I +E+M + +L E + TY L+ GL K ++ AL
Sbjct: 324 DANV--YNAMICNFISARDFDESMRYYRRMLDEEC-EPNLETYSKLVSGLIKGRKVSDAL 380
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
++ EE RG +S + LC A + K GC+++
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 77 NCSEDVPLTLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
+CS ++ ++ ++K +E + ++M + FG P S++ L+ + + +
Sbjct: 255 SCSYNI---MISGWSKLGEVEEMEKVLKEMVESGFG--PDCLSYSHLIEGLGRTGRINDS 309
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+ F G P+ YN +I R+F+++ R M P+ +Y L++
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
K ++ ALE+F+EM RGV P + G A ++++ R+
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK-SRKAGCRI 428
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+ +Y ++++ LSR G+ L +W+ M+++ DV Y ++ GL +G+L+ A V
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
++ + + P+ + + + L K E +++L+
Sbjct: 489 EEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 4/190 (2%)
Query: 97 DEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYN 155
DE++ +R+M D C P + +++ L++ + A + F + GV P
Sbjct: 342 DESMRYYRRMLDE--ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
+K LC A + + G R + +Y L+ ++ G L V+DEM E
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
G DV Y I+DG G A + E +R + PN Y+ + L +
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR-KGFCPNRFVYSRLSSKLMASNKTEL 518
Query: 276 SLEIWERMKK 285
+ +++ ++KK
Sbjct: 519 AYKLFLKIKK 528
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 167/373 (44%), Gaps = 36/373 (9%)
Query: 24 HSALQLFQHATRHPGYT------HSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCN 77
+A F A + GY HS + +R+ + TL+ ++ +Q
Sbjct: 142 ETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL- 200
Query: 78 CSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
L +++ Y +A+N F R F G+ F SLL+A + A
Sbjct: 201 ------LIMIRKYCAVHDVGKAINTFHAYKR-FKLEMGIDDFQSLLSALCRYKNVSDAGH 253
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLC----KKREFEKAKGLLRWMS--GVGLRPDKFSYGT 191
+ + + +++N+++ C RE E+ WM VG++ D SY +
Sbjct: 254 LI-FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERV-----WMEMGNVGVKHDVVSYSS 307
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+I+ +K G LN L++FD M + +EPD YN ++ K+ +A + + + E+
Sbjct: 308 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 367
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
+ PNVV+YN +I+ L + + E+ ++++ M + + TY + M L
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF------MRILRTG 421
Query: 312 QRVYKDMIGRR---VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIF 367
+ V++ + R P V T ++ LC+W + LW+EM + + ++ SY +
Sbjct: 422 EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVM 481
Query: 368 IKGLFENGKVEEA 380
I GLF NGK+EEA
Sbjct: 482 IHGLFLNGKIEEA 494
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 117/234 (50%), Gaps = 10/234 (4%)
Query: 96 PDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYN 155
P EA ++ +M V G + V S++S+++ ++ + K F + P+ + YN
Sbjct: 283 PREAERVWMEMGNV-GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 156 VLIKVLCKKREFEKAKGLLRWMSG-VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
++ L K +A+ L++ M G+ P+ +Y +LI K A +VFDEM E
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVMIRGLSRCGR 272
+G+ P + Y+ + ++G+ E++E L +R+ P V +Y ++IR L R
Sbjct: 402 KGLFPTIRTYHAFMR-ILRTGE-----EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRD 455
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
F L +W+ MK+ D+ +Y +IHGL G ++ A YK+M + + P+
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 52/385 (13%)
Query: 128 VSEQWERAEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK 186
V WE A FF + G +V Y+ +I +L K R+F+ A L+ M P
Sbjct: 137 VRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSL 194
Query: 187 FSYGTL----------------INA--AAKRGDLNAALEVFDEM----------SERG-- 216
+ TL IN A KR L ++ F + S+ G
Sbjct: 195 VNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL 254
Query: 217 -------VEPDVMCYNMIIDGFFKS-GDFLKANEMWERLLREETVFPNVVSYNVMIRGLS 268
D +N++++G+ G +A +W + V +VVSY+ MI S
Sbjct: 255 IFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEM-GNVGVKHDVVSYSSMISCYS 313
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDV 327
+ G ++ L++++RMKK + D Y++++H L++ + A+ + K M + + P+V
Sbjct: 314 KGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNV 373
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWEL 386
VT N+++ LCK K EE+ ++++EM + G I +Y+ F++ + G+ ++EL
Sbjct: 374 VTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE-----EVFEL 427
Query: 387 LLGETALAVDST--TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
L + + T TY +LI LC+ + L + +E + + D+ +Y MI+ L
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHV 469
++++A G M +G + N +V
Sbjct: 488 NGKIEEAYGYYKEMKDKGMRPNENV 512
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF----- 139
++ A AK S EA NL + M+ G P V ++NSL+ + + E A++ F
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 140 ---------------------------AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
A G P VETY +LI+ LC+ R+F+
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
L M + PD SY +I+ G + A + EM ++G+ P+ +MI F
Sbjct: 462 LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 198/423 (46%), Gaps = 13/423 (3%)
Query: 8 LSPHRLLNLLK-SEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHI 66
P + N+LK K PH A++ F + G++H + +L +A + L +
Sbjct: 153 FEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTML-SIAGEARNLDMVDEL 211
Query: 67 IGAIEAAQNCNCSEDVP--LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
+ +E C +D+ L+ Y K + L +F KM R G ++N ++
Sbjct: 212 VSEMEKN---GCDKDIRTWTILISVYGKAKKIGKGLLVFEKM-RKSGFELDATAYNIMIR 267
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
+ ++ + + A +F+ G++ + TY +L+ + K + + + + M +
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
+ ++G L+ + G + ALE+ E+ + + D + +++ G ++ + A E+
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+ + R + NV Y ++I G R S++LE +E +KK+ R V TY+ ++ L +
Sbjct: 388 DIMKRRKLDDSNV--YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV-IS 363
+ + ++ +MI + PD V A++ G +V E+++++ M + G + S
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
Y+IF+K L + + +E + I+ + + + + + +I + KNG K + +++E
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHA-SKIVIRDDIFSWVISSMEKNGEKEK-IHLIKEI 563
Query: 424 EHR 426
+ R
Sbjct: 564 QKR 566
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 154/372 (41%), Gaps = 41/372 (11%)
Query: 8 LSPHRLLNLLKSEK-NPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHI 66
+P ++ +L+ K ++ L+ F + GY H+S ++ VA +
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIK-VAGCGKDFKQMRSL 700
Query: 67 IGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
+ Q C ++D ++ Y + + + A+ F++M + G P +F L+
Sbjct: 701 FYEMRR-QGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEM-KDMGLIPSSSTFKCLITVL 758
Query: 127 AVSE--QWERAEKFFAYFDTAGVSPNVE-------------------------------- 152
+ E A + F +G P+ E
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV 818
Query: 153 --TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
Y++ I+ LC+ + E+A L G D+++YG++++ +RGDL AL+ +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
M E G +P V Y +I FFK K E ++ + E+ P+VV+Y MI G
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK-MEGESCEPSVVTYTAMICGYMSL 937
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
G+ E+ + M++ D TYS I+ L Q + A ++ +M+ + ++P +
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 331 NAMLNGLCKWGK 342
+ GL + GK
Sbjct: 998 RTVFYGLNREGK 1009
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 145/352 (41%), Gaps = 38/352 (10%)
Query: 137 KFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+FF++ G N E YN+ IKV ++F++ + L M G + ++ +I
Sbjct: 663 RFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQ 722
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF--KSGDFLKANEMWERLLREETV 253
+ G N A+ F EM + G+ P + +I K + +A + ++R V
Sbjct: 723 YGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Query: 254 ---------------------------------FPNVVSYNVMIRGLSRCGRFSESLEIW 280
FP V+Y++ IR L R G+ E+L
Sbjct: 783 PDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 281 ERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKW 340
+ D +TY S++HGL Q G+L A M P V +++ K
Sbjct: 843 ASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKE 902
Query: 341 GKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT 399
++E+ E ++M G+S +V++Y I G GKVEEA N + + E + D T
Sbjct: 903 KQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM-EERGTSPDFKT 961
Query: 400 YGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
Y I+ LC+ AL++L E +G + ++ L +E + D A
Sbjct: 962 YSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 10/325 (3%)
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER- 215
+ +VL R++E+ + L S V P+ ++ A +G NA L F + +R
Sbjct: 618 ICRVLSSSRDWERTQEALE-KSTVQFTPELVV--EVLRHAKIQG--NAVLRFFSWVGKRN 672
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE 275
G + + YNM I DF + ++ + R+ + ++ +MI R G +
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQD-TWAIMIMQYGRTGLTNI 731
Query: 276 SLEIWERMKKNERKHDVFTYSSLIHGLSQMG--NLDGAQRVYKDMIGRRVSPDVVTCNAM 333
++ ++ MK T+ LI L + N++ A R +++MI PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
L LC+ G +++ + +G+ G ++Y+I+I+ L GK+EEA++ GE +L
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
+D TYG ++HGL + G L KAL + + G V Y+S+I KE++L+
Sbjct: 852 -LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 454 VVSLMDKRGCKLNTHVCNPLIDGFI 478
M+ C+ + +I G++
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYM 935
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 170/389 (43%), Gaps = 8/389 (2%)
Query: 95 MPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETY 154
+P A+ F + + G V +N++L+ + + ++ + + G ++ T+
Sbjct: 168 VPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTW 227
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA--AAKRGDLNAALEVFDEM 212
+LI V K ++ K + M G D +Y +I + A RGDL ALE + EM
Sbjct: 228 TILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDL--ALEFYKEM 285
Query: 213 SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
E+G+ + Y M++D KS + + ++R + + ++ +++ G+
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH-DAFGYLLKSFCVSGK 344
Query: 273 FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNA 332
E+LE+ +K E D + L+ GL + + A + D++ RR D
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGI 403
Query: 333 MLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+++G + V ++ E +E + +SG V +Y ++ LF+ + E+ N++ ++ E
Sbjct: 404 IISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI-EN 462
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
+ DS ++ G + +A +V E +G +YS + LC+ R D+
Sbjct: 463 GIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEI 522
Query: 452 AGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ + M + + + +I KN
Sbjct: 523 IKIFNQMHASKIVIRDDIFSWVISSMEKN 551
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 256 NVVSYNVMIRGLSRCGR-FSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
N +YN+ I+ ++ CG+ F + ++ M++ T++ +I + G + A R
Sbjct: 677 NSEAYNMSIK-VAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRT 735
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLC--KWGKVEESFELWEEMGQSG---SRNVISYNIFIK 369
+K+M + P T ++ LC K VEE+ + EM +SG R ++ ++
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELV--QDYLG 793
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD 429
L E G ++A + + L G+ V + Y I I LC+ G L +AL L E
Sbjct: 794 CLCEVGNTKDAKSCLDSL-GKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 430 VDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKS 489
+D + Y S+++ L + L A V+ M + G K HV LI F K L + ++
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 490 LGK 492
K
Sbjct: 912 CQK 914
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 194/461 (42%), Gaps = 56/461 (12%)
Query: 27 LQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPLTL 86
L+ F A R PG+ H+ A H + ++ L+ + ++C S + L
Sbjct: 130 LKFFDWAARQPGFHHTRATF-HAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDAL 188
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
+ YA D AL F M R G ++ LLNA + ++ + F G
Sbjct: 189 VVGYAVAGRTDIALQHFGNM-RFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRG 247
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWM-------SGVGLRPDKFSYGTLINAAAKR 199
V T+++L+K CK+ + ++A+ LR + G GL G L++A +
Sbjct: 248 FVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGL-------GILVDALCSK 299
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
A ++ DE+ G NM +R +
Sbjct: 300 RKFQEATKLLDEIKLVGT------VNM------------------DR------------A 323
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
YN+ IR L + G + + +++ E + +VF Y+S++ L + NLDG + +M
Sbjct: 324 YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKV 377
+ R VSP+ T NA L CK G V+E+ EL+ + G + +SYN I L N V
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
E+A ++ + + + T+ L + LC G + A +++ A R A
Sbjct: 444 EQAYDVLKGAIDRGHF-LGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
+I+ALC +++DA + L +K G + + LI G I
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSI 543
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 169/439 (38%), Gaps = 50/439 (11%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
++A K + + +K+ + GC V +NS++ + G
Sbjct: 328 IRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
VSPN +T N + CK ++A L R S +G P SY LI+ + A
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY 447
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
+V +RG ++ + + G A E+ E + P ++ +I
Sbjct: 448 DVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA-ERDLLPKRIAGCKIISA 506
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
L G+ ++L I E K+ ++SLI+G + D A ++ M + +P
Sbjct: 507 LCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPT 566
Query: 327 VVTCNAMLNGLCKWGKVEESF---------ELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
++ +C+ E++F LWE V +YN+FI+G GK
Sbjct: 567 RSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEH-------KVQAYNLFIEGAGFAGKP 619
Query: 378 EEAMNIWELL--------LGETALAVDS-------------------------TTYGILI 404
+ A +++++ + L + S Y ++I
Sbjct: 620 KLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMI 679
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
GLCK L+ A+ LEE + G + Y I LC E + D+A G+V+ K G +
Sbjct: 680 VGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRR 739
Query: 465 LNTHVCNPLIDGFIKNSNL 483
+ + N L+ +K+ +
Sbjct: 740 ITAFIGNVLLHNAMKSKGV 758
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
+ ++ G + GR +L+ + M+ D F Y L++ L + D ++ D I
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIF-DQIS 244
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVIS-YNIFIKGLFENGKVEE 379
R VT + ++ CK GK++E+ + + + S I + L K +E
Sbjct: 245 VRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE-AEHRGGDVDVFAYSSM 438
A + + + + +D Y I I L K G+LN L++ + G +++VF Y+SM
Sbjct: 305 ATKLLDEIKLVGTVNMDRA-YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSM 363
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ L KE LD +++ M RG N N + F K
Sbjct: 364 VFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCK 404
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 18/383 (4%)
Query: 77 NCSEDVPLTLLKAYAKR---SMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
N SE L L+ AY K + + L++ KM G P V S+ +L+ ++ +
Sbjct: 136 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCN 191
Query: 134 RAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRPDKFSYG 190
AE F ++G P+ TY +++K + +F++A+ + + L+PD+ Y
Sbjct: 192 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
+I K G+ A +VF M +GV + YN ++ F++ + + +++++++ R
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETS-YKEVSKIYDQMQRS 308
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ + P+VVSY ++I+ R R E+L ++E M + Y+ L+ + G ++
Sbjct: 309 D-IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIK 369
A+ V+K M R+ PD+ + ML+ +E + + ++ + G N+++Y IK
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGIL-IHGLCKNGYLNKALQVLEEAEHRGG 428
G + VE+ M ++E + A + I+ G CKN AL +E E G
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGV 485
Query: 429 DVDVFAYSSMINALCKERRLDDA 451
D A + +++ + L++A
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEA 508
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 144/324 (44%), Gaps = 7/324 (2%)
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
+LI K F A+ +L +S +G P+ SY L+ + + G N A +F M
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET--VFPNVVSYNVMIRGLSRCGRF 273
G EP + Y +I+ F + F +A E++E LL E+ + P+ Y++MI + G +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
++ +++ M TY+SL +S + ++Y M + PDVV+ +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ + + EE+ ++EEM +G R +YNI + +G VE+A +++ + +
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
D +Y ++ + A + + + G + ++ Y ++I K ++
Sbjct: 381 FP-DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDG 476
V M G K N + ++D
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDA 463
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 103 FRKMDRVF------GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+ K +VF G ++NSL+ +F S ++ K + + + P+V +Y +
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LIK + R E+A + M G+RP +Y L++A A G + A VF M
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ PD+ Y ++ + + D A + ++R ++ + PN+V+Y +I+G ++ +
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKR-IKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+E++E+M+ + K + ++++ + N A YK+M V PD N +L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Query: 337 LCKWGKVEESFEL 349
++EE+ EL
Sbjct: 499 ASTQDELEEAKEL 511
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
E ++ +M R +P V S+ L+ A+ + + E A F AGV P + YN+L
Sbjct: 297 EVSKIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+ E+AK + + M + PD +SY T+++A D+ A + F + G
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
EP+++ Y +I G+ K+ D K E++E+ +R + N ++ RC F +L
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEK-MRLSGIKANQTILTTIMDASGRCKNFGSAL 474
Query: 278 EIWERMKK------NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
++ M+ + K+ + + +S L + L G + +I R D
Sbjct: 475 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGSD 529
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 18/383 (4%)
Query: 77 NCSEDVPLTLLKAYAKR---SMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWE 133
N SE L L+ AY K + + L++ KM G P V S+ +L+ ++ +
Sbjct: 143 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCN 198
Query: 134 RAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM---SGVGLRPDKFSYG 190
AE F ++G P+ TY +++K + +F++A+ + + L+PD+ Y
Sbjct: 199 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
+I K G+ A +VF M +GV + YN ++ F++ + + +++++++ R
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETS-YKEVSKIYDQMQRS 315
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ + P+VVSY ++I+ R R E+L ++E M + Y+ L+ + G ++
Sbjct: 316 D-IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIK 369
A+ V+K M R+ PD+ + ML+ +E + + ++ + G N+++Y IK
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 370 GLFENGKVEEAMNIWELLLGETALAVDSTTYGIL-IHGLCKNGYLNKALQVLEEAEHRGG 428
G + VE+ M ++E + A + I+ G CKN AL +E E G
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGV 492
Query: 429 DVDVFAYSSMINALCKERRLDDA 451
D A + +++ + L++A
Sbjct: 493 PPDQKAKNVLLSLASTQDELEEA 515
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 144/324 (44%), Gaps = 7/324 (2%)
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSER 215
+LI K F A+ +L +S +G P+ SY L+ + + G N A +F M
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET--VFPNVVSYNVMIRGLSRCGRF 273
G EP + Y +I+ F + F +A E++E LL E+ + P+ Y++MI + G +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
++ +++ M TY+SL +S + ++Y M + PDVV+ +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ + + EE+ ++EEM +G R +YNI + +G VE+A +++ + +
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
D +Y ++ + A + + + G + ++ Y ++I K ++
Sbjct: 388 FP-DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDG 476
V M G K N + ++D
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDA 470
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 103 FRKMDRVF------GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
+ K +VF G ++NSL+ +F S ++ K + + + P+V +Y +
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
LIK + R E+A + M G+RP +Y L++A A G + A VF M
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ PD+ Y ++ + + D A + ++R ++ + PN+V+Y +I+G ++ +
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKR-IKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+E++E+M+ + K + ++++ + N A YK+M V PD N +L+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 505
Query: 337 LCKWGKVEESFEL 349
++EE+ EL
Sbjct: 506 ASTQDELEEAKEL 518
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
E ++ +M R +P V S+ L+ A+ + + E A F AGV P + YN+L
Sbjct: 304 EVSKIYDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+ E+AK + + M + PD +SY T+++A D+ A + F + G
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
EP+++ Y +I G+ K+ D K E++E+ +R + N ++ RC F +L
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEK-MRLSGIKANQTILTTIMDASGRCKNFGSAL 481
Query: 278 EIWERMKK------NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
++ M+ + K+ + + +S L + L G + +I R D
Sbjct: 482 GWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGSD 536
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 5/284 (1%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
P + +N+L+ LCK ++ + LLR M ++PD ++ L + D A+
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF--PNVVSYNVMI 264
++ +EM E G +P+ Y ID F ++G +A ++++ ++ + + P ++ +MI
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
L++ + E E+ RM DV TY +I G+ +D A + +M +
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQS-GSRNVISYNIFIKGLFENGKVEEAMNI 383
PD+VT N L LC+ K +E+ +L+ M +S + +V +YN+ I FE + A N
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
W + + D TY +I+GL +A +LEE ++G
Sbjct: 469 WTEMDKRDCVQ-DVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 171/409 (41%), Gaps = 53/409 (12%)
Query: 2 VDLPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLP 61
VDL P+ L L EK +A + F A Y+H ++ ++S
Sbjct: 121 VDLTTPVVCKILQRLQYEEK---TAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNK 177
Query: 62 HAPHIIGAIEAAQNCNCSE---DVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRS 118
+I ++ + N + DV L +L+ Y +R + RK RV +P + +
Sbjct: 178 QFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRV-KTQPEINA 236
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
FN LL+A + E V P+ T+NVL C+ R+ +KA LL M
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE-------------------- 218
G +P+ F+Y I+ + G ++ A ++FD M +G
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 355
Query: 219 ------------------PDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVV 258
PDV Y +I+G + K +E ++ L + + P++V
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAE---KVDEAYKFLDEMSNKGYPPDIV 412
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+YN +R L + E+L+++ RM ++ V TY+ LI +M + DGA + +M
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIF 367
R DV T AM+NGL + +E+ L EE+ G + + Y +F
Sbjct: 473 DKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK--LPYRVF 519
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+P++ +NM++D K G +K E R +R V P+ ++NV+ G R ++
Sbjct: 230 TQPEINAFNMLLDALCKCG-LVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKA 287
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK-------------------- 316
+++ E M + K + FTY + I Q G +D A ++
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 317 --------------DMIGRRVS----PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG- 357
++IGR +S PDV T ++ G+C KV+E+++ +EM G
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
++++YN F++ L EN K +EA+ ++ ++ E+ A TY +LI + + A
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
E + R DV Y +MIN L R +A ++ + +G KL V + +
Sbjct: 467 NTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRL 526
Query: 478 IKNSNLTLLFK 488
+ NL + K
Sbjct: 527 SEVGNLKAIHK 537
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGC--RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+ + + M DEA +LF M P ++F ++ A A +++ E + +
Sbjct: 310 IDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIS 369
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+V TY +I+ +C + ++A L MS G PD +Y + + +
Sbjct: 370 TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDE 429
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL+++ M E P V YNM+I FF+ D A W + + + V +V +Y MI
Sbjct: 430 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCV-QDVETYCAMI 488
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
GL C R E+ + E + K + S + LS++GNL +V + M
Sbjct: 489 NGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 161/351 (45%), Gaps = 16/351 (4%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P +S SL+N ++ EKF ++ N+ Y+ ++ L + + +
Sbjct: 39 PPQKSLTSLVNGERNPKRI--VEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEI 96
Query: 174 L------RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMI 227
L R MS G +I+ K G A +VF+EM R + V+ +N +
Sbjct: 97 LEEQKKYRDMSKEGF------AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL 150
Query: 228 IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
+ + S F E++ L + ++ P++VSYN +I+ L E++ + + ++
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
K D+ T+++L+ G + + ++ M+ + V+ D+ T NA L GL K +E
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV 270
Query: 348 ELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
L+ E+ SG + +V S+N I+G GK++EA W + + D T+ +L+
Sbjct: 271 NLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA-EAWYKEIVKHGYRPDKATFALLLPA 329
Query: 407 LCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
+CK G A+++ +E + V +++ L K + ++A +V +
Sbjct: 330 MCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 42/312 (13%)
Query: 8 LSPHR--LLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
+SP + L +L+ E+NP ++ F+ A + + AV +RR+ + L H
Sbjct: 37 ISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRL--HYVE 94
Query: 66 IIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNA 125
I + E ++ Y K M + A +F +M C+ V SFN+LL+A
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNR-DCKRSVLSFNALLSA 153
Query: 126 FAVSEQWERAEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
+ +S++++ E+ F + P++ +YN LIK LC+K +A LL + GL+P
Sbjct: 154 YRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKP 213
Query: 185 DKFSYGTLINAAAKRGDL-------------NAALEV----------------------F 209
D ++ TL+ ++ +G N A+++ F
Sbjct: 214 DIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF 273
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
E+ G++PDV +N +I G G +A E W + + + P+ ++ +++ + +
Sbjct: 274 GELKASGLKPDVFSFNAMIRGSINEGKMDEA-EAWYKEIVKHGYRPDKATFALLLPAMCK 332
Query: 270 CGRFSESLEIWE 281
G F ++E+++
Sbjct: 333 AGDFESAIELFK 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TL+KA ++ EA+ L +++ G +P + +FN+LL + + Q+E E+ +A
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENK-GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V+ ++ TYN + L + + ++ L + GL+PD FS+ +I + G ++
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW-----ERLLREETVFPNVVS 259
A + E+ + G PD + +++ K+GDF A E++ +R L +T +V
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV- 362
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNE 287
+ +++G R E+ EI + K N+
Sbjct: 363 -DELVKGSKR----EEAEEIVKIAKTND 385
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 154/322 (47%), Gaps = 4/322 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+ +F + AFA +++ ++A F VET N L+ L + + ++A+ L
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ P+ +Y L+N + +L A ++++M ++G++PD++ +N++++G +S
Sbjct: 289 KLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
A +++ +++ + PNV SY +MIR + ++E ++ M + + D Y
Sbjct: 348 KKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ LI G LD + K+M + PD T NA++ + E + ++ +M Q
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Query: 356 SGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+ I ++N+ +K F E +WE ++ + + D +Y +LI GL G
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI-KKGICPDDNSYTVLIRGLIGEGKSR 525
Query: 415 KALQVLEEAEHRGGDVDVFAYS 436
+A + LEE +G + Y+
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYN 547
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 8/296 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL + + + EA LF K+ F P + ++ LLN + A + +
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ +NV+++ L + R+ A L M G P+ SY +I K+ + A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVM 263
+E FD+M + G++PD Y +I GF G K + ++E L ++E+ P+ +YN +
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I+ ++ + I+ +M +NE + + T++ ++ N + + V+++MI + +
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN-VISYNIFIKGLFENGKVE 378
PD + ++ GL GK E+ EEM G + +I YN F G+ E
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 173/378 (45%), Gaps = 47/378 (12%)
Query: 135 AEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP-DKFSYGTL 192
A +FF + + G + + TYN ++ +L K R+FE +L M GL + F+
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 237
Query: 193 INAAAK--------------------------------RGDLNAALEV-FDEMSERGVEP 219
AAAK R L +V FD++ ER P
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTP 296
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEI 279
++M Y ++++G+ + + ++A +W ++ ++ + P++V++NVM+ GL R + S+++++
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMI-DQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
+ MK +V +Y+ +I + +++ A + DM+ + PD ++ G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 340 WGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIW-ELLLGETALAVDS 397
K++ +EL +EM + G + +YN IK + E A I+ +++ E ++ +
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSL 457
+ + + +N + +A V EE +G D +Y+ +I L E + +A +
Sbjct: 476 FNMIMKSYFMARNYEMGRA--VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 458 MDKRGCKLNTHVCNPLID 475
M +G K PLID
Sbjct: 534 MLDKGMK------TPLID 545
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 5/245 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G +P + + N +L S + A K F + G PNV +Y ++I+ CK+ E A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
M GL+PD Y LI + L+ E+ EM E+G PD YN +I
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
A ++ ++++ E + P++ ++N++++ + +WE M K
Sbjct: 448 MANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +Y+ LI GL G A R ++M+ + + ++ N + G+ E++
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIF 562
Query: 351 EEMGQ 355
EE+ Q
Sbjct: 563 EELAQ 567
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+YN M+ L++ +F + + E M K + FT + + + A +++
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA--MKAFAAAKERKKAVGIFEL 254
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
M + V T N +L+ L + +E+ L++++ + + N+++Y + + G +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
EA IW ++ + L D + +++ GL ++ + A+++ + +G +V +Y+
Sbjct: 315 IEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
MI CK+ ++ A M G + + V LI GF L +++ L
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 165/351 (47%), Gaps = 12/351 (3%)
Query: 135 AEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLIN 194
A + F G+ PN N + L + + +KA + +M +Y ++
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLMLK 184
Query: 195 AAAKRGDLNAALEVFDEMSERGVEP------DVMCYNMIIDGFFKSGDFLKANEMWERLL 248
A A+ +AL +F E+ ER EP DV+ YN I + + + +W R++
Sbjct: 185 AVAEVKGCESALRMFREL-ER--EPKRRSCFDVVLYNTAISLCGRINNVYETERIW-RVM 240
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ + ++Y++++ RCGR +L++++ M N+ ++I ++
Sbjct: 241 KGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKW 300
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIF 367
D A ++++ M+ + + P++V CN ++N L K GKV F+++ + G + + ++N
Sbjct: 301 DLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNAL 360
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ L++ + E+ + +++++ E ++ Y + K GY KA+++L E E G
Sbjct: 361 LTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSG 420
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
V +Y+ +I+A K R+ A V M +R CK NT L+ I
Sbjct: 421 LTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCI 471
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 8/264 (3%)
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
ED ++ A K D AL +F+ M + G +P + + N+L+N+ + + K +
Sbjct: 284 EDAMYAMISACTKEEKWDLALKIFQSMLKK-GMKPNLVACNTLINSLGKAGKVGLVFKVY 342
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP-DKFSYGTLINAAAK 198
+ + G P+ T+N L+ L K +E L + L +++ Y T + + K
Sbjct: 343 SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQK 402
Query: 199 RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVV 258
G A+++ EM G+ YN++I KS A ++E + + + PN
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCK-PNTF 461
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+Y ++R C S E+ + +KK E DV Y++ IHG+ A+ +Y M
Sbjct: 462 TYLSLVRS---CIWGSLWDEVEDILKKVE--PDVSLYNAAIHGMCLRREFKFAKELYVKM 516
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGK 342
+ PD T ML L K K
Sbjct: 517 REMGLEPDGKTRAMMLQNLKKHQK 540
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 155/333 (46%), Gaps = 23/333 (6%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRS-FNSLLNAFAVS-----EQWERAEKFF 139
+LKA A+ + AL +FR+++R P RS F+ +L A+S E+ +
Sbjct: 182 MLKAVAEVKGCESALRMFRELER----EPKRRSCFDVVLYNTAISLCGRINNVYETERIW 237
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM--SGVGLRPDKFSYGTLINAAA 197
G TY++L+ + + E A + M + + LR D + +I+A
Sbjct: 238 RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED--AMYAMISACT 295
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
K + AL++F M ++G++P+++ N +I+ K+G +++ +L+ P+
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS-VLKSLGHKPDE 354
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMK-KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
++N ++ L + R+ + L++++ ++ +N + + Y++ + ++G + A ++
Sbjct: 355 YTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLY 414
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENG 375
+M G ++ + N +++ K K + + ++E M Q + N +Y ++
Sbjct: 415 EMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGS 474
Query: 376 KVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
+E +I + + D + Y IHG+C
Sbjct: 475 LWDEVEDILK------KVEPDVSLYNAAIHGMC 501
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 10/231 (4%)
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+R LSR + +LE+++ M+ + + +S + L + G++ A V++ M R
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM---RK 170
Query: 324 SPDVV--TCNAMLNGLCKWGKVEESFELWEEMGQSGSR----NVISYNIFIKGLFENGKV 377
+V T + ML + + E + ++ E+ + R +V+ YN I V
Sbjct: 171 KENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNV 230
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
E IW ++ G+ + + TY +L+ + G AL V +E + + A +
Sbjct: 231 YETERIWRVMKGDGHIGTE-ITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYA 289
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
MI+A KE + D A + M K+G K N CN LI+ K + L+FK
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFK 340
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 127/296 (42%), Gaps = 11/296 (3%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
+++ L++ F + E A + +S + +I K+ +++ A + + M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G++P+ + TLIN+ K G + +V+ + G +PD +N ++ +K+ +
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
++++ + E N YN + + G + +++++ M+ + +Y+
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+I + A VY+ M R P+ T +++ C WG LW+E+
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWG------SLWDEVEDIL 483
Query: 358 SR---NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
+ +V YN I G+ + + A ++ + + E L D T +++ L K+
Sbjct: 484 KKVEPDVSLYNAAIHGMCLRREFKFAKELY-VKMREMGLEPDGKTRAMMLQNLKKH 538
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 19/371 (5%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+R+ L++ S+ W+ P+ +T + LI+ + R+F LL
Sbjct: 104 LRTTKHLISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLS 163
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRG-----DLNAALEVFDEMSER-GVEPDVMCYNMIID 229
R DK S + AA +G ++ ++VFD + + GVEP CY I++
Sbjct: 164 V-----FRSDK-SLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIME 217
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVS---YNVMIRGLSRCGRFSESLEIWERMKKN 286
K G+ K E+++ + F S Y ++ L++ GR E+LE+ E MK
Sbjct: 218 AHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDK 277
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
YS LI ++ + ++++K+ G+++ D C ++ + G +E +
Sbjct: 278 GIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETT 337
Query: 347 FELWEEMGQSGSR--NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
E+ M ++ + + I I + G + EA+ ++E + E A TY I I
Sbjct: 338 LEVVAAMRKAELKVTDCILCAI-VNGFSKQRGFAEAVKVYEWAMKEECEA-GQVTYAIAI 395
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
+ C+ NKA + +E +G D V AYS++++ K RRL DA +++ M +RGCK
Sbjct: 396 NAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCK 455
Query: 465 LNTHVCNPLID 475
N + N LID
Sbjct: 456 PNIWIYNSLID 466
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 11/236 (4%)
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
+++N F+ + A K + + TY + I C+ ++ KA+ L M
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G +Y +++ K L+ A+ + +M +RG +P++ YN +ID ++ D +A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
++W+ + R + V P+ VSY MI +R +E+++ + N K D ++
Sbjct: 478 EKIWKEMKRAK-VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVG 536
Query: 301 GLSQMGNLDGAQRVYKDMI--GRRVSPDVVTC------NAMLNGLCKWGKVEESFE 348
S+ +D R+ +DM G R+ + + +A LN +W ++ESF+
Sbjct: 537 VFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRW--LQESFD 590
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 73/333 (21%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ + E Y++LI+ + RE + L + G L D ++ + G++
Sbjct: 278 GIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETT 337
Query: 206 LEVFDEM--SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE------------ 251
LEV M +E V ++C I++GF K F +A +++E ++EE
Sbjct: 338 LEVVAAMRKAELKVTDCILC--AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAI 395
Query: 252 TVFPNVVSYN--------VMIRGLSRC--------------GRFSESLEIWERMKKNERK 289
+ + YN ++ +G +C R S+++ + +MK+ K
Sbjct: 396 NAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCK 455
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+++ Y+SLI + +L A++++K+M +V PD V+ +M++ + ++E EL
Sbjct: 456 PNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Query: 350 WEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
++E + GK++ AM GI++ K
Sbjct: 516 YQEFRMN-----------------RGKIDRAMA------------------GIMVGVFSK 540
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+++ +++L++ + G +D YSS +NAL
Sbjct: 541 TSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Query: 112 CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAK 171
C G ++ +NA+ E++ +AE F G V Y+ ++ + K R A
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 172 GLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGF 231
L+ M G +P+ + Y +LI+ + DL A +++ EM V PD + Y +I +
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
+S + + E+++ ++ +M+ S+ R E + + + MK + D
Sbjct: 504 NRSKELERCVELYQEFRMNRGKIDRAMA-GIMVGVFSKTSRIDELMRLLQDMKVEGTRLD 562
Query: 292 VFTYSSLIHGLSQMG 306
YSS ++ L G
Sbjct: 563 ARLYSSALNALRDAG 577
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A ++FDEM E E V +N ++ + S +A + ++ L + + P++V+YN MI
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
+ L R G + L I+E ++KN + D+ ++++L+ + R++ M + +S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNI 383
P++ + N+ + GL + K ++ L + M G S +V +YN I + +EE M
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + E L D+ TY +LI LCK G L++A++V EEA Y ++ L
Sbjct: 321 YN-EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 444 KERRLDDAAGVV 455
++D+A +V
Sbjct: 380 GAGKIDEATQLV 391
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++KA ++ D+ L++F ++++ G P + SFN+LL F E + ++ + +
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKN-GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+SPN+ +YN ++ L + ++F A L+ M G+ PD +Y LI A +L
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF-PNVVSYNVM 263
++ ++EM E+G+ PD + Y M+I K GD +A E+ E ++ + + PN+ Y +
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPV 374
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
+ L G+ E+ ++ KN + F Y
Sbjct: 375 VERLMGAGKIDEATQLV----KNGKLQSYFRY 402
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 79 SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKF 138
SED + ++ Y M + A LF +M + C V+SFN+LL+A+ S++ + A K
Sbjct: 121 SEDFVIRIMLLYGYSGMAEHAHKLFDEMPEL-NCERTVKSFNALLSAYVNSKKLDEAMKT 179
Query: 139 FAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA 197
F + G++P++ TYN +IK LC+K + + + G PD S+ TL+
Sbjct: 180 FKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFY 239
Query: 198 KR-----GD------------------------------LNAALEVFDEMSERGVEPDVM 222
+R GD AL + D M G+ PDV
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVH 299
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWER 282
YN +I + + + + + ++E+ + P+ V+Y ++I L + G ++E+ E
Sbjct: 300 TYNALITAYRVDNNLEEVMKCYNE-MKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Query: 283 MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
K++ Y ++ L G +D A ++ K+
Sbjct: 359 AIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL----------SRCGRFSESLEI 279
G FK A R + T FP+ + + G S+ + ++ +E
Sbjct: 14 GIFKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDGGQSSNDAKDSKNSKLTQKVEK 73
Query: 280 WERMKKNERKHDVF-TYSSLIHGLSQMGNLDGAQRV--YKDMIGRRVSPDVVTCNAMLNG 336
++R ++E V YS+ I L + V Y+ S D V +L G
Sbjct: 74 FKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYG 133
Query: 337 LCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAV 395
G E + +L++EM + + R V S+N + + K++EAM ++ L + +
Sbjct: 134 YS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 396 DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVV 455
D TY +I LC+ G ++ L + EE E G + D+ ++++++ + + +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 456 SLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
LM + N N + G +N T
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 181/365 (49%), Gaps = 39/365 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKM--DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
++++AYA S P+ AL +FR+M VF P SF +L A A +E + F
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVF---PDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
+G+ +V N L+ V + FE A+ +L M +R D S+ +L++A ++G +
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP---VR-DAVSWNSLLSAYLEKGLV 222
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
+ A +FDEM ER VE +N +I G+ +G +A E+++ + +VVS+N
Sbjct: 223 DEARALFDEMEERNVES----WNFMISGYAAAGLVKEAKEVFDSM-----PVRDVVSWNA 273
Query: 263 MIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQ--RVYKDMI 319
M+ + G ++E LE++ +M + K D FT S++ + +G+L + VY D
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEE 379
G + + T A+++ K GK++++ E++ + R+V ++N I L +G ++
Sbjct: 334 GIEIEGFLAT--ALVDMYSKCGKIDKALEVFR---ATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKN-GYLNKALQVLE----------EAEHRGG 428
A+ I+ ++ E T G+L C + G L++A ++ E EH G
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVL--SACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 429 DVDVF 433
VD+
Sbjct: 447 MVDLL 451
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 22/274 (8%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL AY ++ + DEA LF +M+ V S+N +++ +A + + A++ F D+
Sbjct: 211 SLLSAYLEKGLVDEARALFDEMEE-----RNVESWNFMISGYAAAGLVKEAKEVF---DS 262
Query: 145 AGVSPNVETYNVLIK----VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
V +V ++N ++ V C E +L +PD F+ ++++A A G
Sbjct: 263 MPVR-DVVSWNAMVTAYAHVGCYNEVLEVFNKML---DDSTEKPDGFTLVSVLSACASLG 318
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
L+ V + + G+E + ++D + K G KA E++ + +V ++
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR-----DVSTW 373
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
N +I LS G ++LEI+ M K + T+ ++ + +G LD A+++++ M
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Query: 321 -RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
RV P + M++ L + GK+EE+ EL E+
Sbjct: 434 VYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 21/319 (6%)
Query: 168 EKAKGLLR------WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
E+AK L +M GL D FS L+ AA + ++ G P+
Sbjct: 47 ERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG-SPNG 105
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+N +I + S A ++ +L VFP+ S+ +++ + F E +I
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
K+ DVF ++L++ + G + A++V M R D V+ N++L+ + G
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLEKG 220
Query: 342 KVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYG 401
V+E+ L++EM + RNV S+N I G G V+EA +++ + D ++
Sbjct: 221 LVDEARALFDEMEE---RNVESWNFMISGYAAAGLVKEAKEVFD-----SMPVRDVVSWN 272
Query: 402 ILIHGLCKNGYLNKALQVLEEA-EHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
++ G N+ L+V + + D F S+++A L V +DK
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 461 RGCKLNTHVCNPLIDGFIK 479
G ++ + L+D + K
Sbjct: 333 HGIEIEGFLATALVDMYSK 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 138/321 (42%), Gaps = 20/321 (6%)
Query: 148 SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
SPN T+N +I+ E A + R M + PDK+S+ ++ A A +
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ + G+ DV N +++ + +SG F A ++ +R+ + VS+N ++
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM-----PVRDAVSWNSLLSAY 216
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
G E+ +++ M+ + +V +++ +I G + G + A+ V+ M R DV
Sbjct: 217 LEKGLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR----DV 268
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI--FIKGLFENGKVEEAMNIWE 385
V+ NAM+ G E E++ +M + + + + G + + +
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV-H 327
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+ + + + ++ L+ K G ++KAL+V R DV ++S+I+ L
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVH 383
Query: 446 RRLDDAAGVVSLMDKRGCKLN 466
DA + S M G K N
Sbjct: 384 GLGKDALEIFSEMVYEGFKPN 404
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 7/230 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ AYA +E L +F KM +P + S+L+A A + E Y D
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ L+ + K + +KA + R S + D ++ ++I+ + G
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATS----KRDVSTWNSIISDLSVHGLGKD 388
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
ALE+F EM G +P+ + + ++ G +A +++E + V P + Y M+
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
L R G+ E+ E+ + +E SL+ + G L+ A+R+
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEAS---ILLESLLGACKRFGQLEQAERI 495
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 168/388 (43%), Gaps = 17/388 (4%)
Query: 7 PLSPHRLLNLLK-SEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPT------L 59
P++ + +L+ + ++ + +L+ F A +P YT +S + + + +AS +
Sbjct: 74 PVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKI 133
Query: 60 LPHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
L + I C +++ Y K D+A+ LF + + GC+ V +
Sbjct: 134 LKQMKDLSLDISGETLC--------FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
NSLL+A + + A G+ P+ TY +L+ C + ++A+ L MS
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G P LI G L +A E+ +M++ G PD+ +N++I+ KSG+
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
EM+ + ++ +Y +I +S+ G+ E+ + ++ K Y+ +I
Sbjct: 306 CIEMYYTACKLGLCV-DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
G+ + G D A + DM + P+ ++ + GK ++ EM + G
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 360 NVI-SYNIFIKGLFENGKVEEAMNIWEL 386
+ +++ GL GK + AM I +L
Sbjct: 425 PISRCFDMVTDGLKNGGKHDLAMRIEQL 452
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 161/388 (41%), Gaps = 20/388 (5%)
Query: 96 PDEALNLFR---KMDRVFGC-RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNV 151
P+ +LN R + VF R RS N L F W R+ + +P
Sbjct: 64 PERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFF----NWARSNPSY--------TPTS 111
Query: 152 ETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDE 211
Y L K L +++E +L+ M + L + +I K G ++ A+E+F+
Sbjct: 112 MEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 212 MSER-GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
+ + G + V YN ++ F A + R++R+ + P+ +Y +++ G
Sbjct: 172 VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-GLKPDKRTYAILVNGWCSA 230
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
G+ E+ E + M + LI GL G L+ A+ + M PD+ T
Sbjct: 231 GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF 290
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
N ++ + K G+VE E++ + G ++ +Y I + + GK++EA + +
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV- 349
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
E + Y +I G+C+NG + A + + + + Y+ +I + +
Sbjct: 350 EDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFV 409
Query: 450 DAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
DAA + M + G + + + DG
Sbjct: 410 DAANYLVEMTEMGLVPISRCFDMVTDGL 437
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 239 KANEMWERLLREETVFPNVVSYNV--MIRGLSRCGRFSESLEIWERMKKNER-KHDVFTY 295
K MW+ L + + + ++ + +I + G +++E++ + K + V Y
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+SL+H L + GA + + MI + + PD T ++NG C GK++E+ E +EM +
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 356 SG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
G + ++ I+GL G +E A + + + D T+ ILI + K+G +
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT-KGGFVPDIQTFNILIEAISKSGEVE 304
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
+++ A G VD+ Y ++I A+ K ++D+A +++ + G K + P+I
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 475 DGFIKN 480
G +N
Sbjct: 365 KGMCRN 370
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+ +F + AFA +++ ++A F VET N L+ L + + ++A+ L
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 287
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ P+ +Y L+N + +L A ++++M + G++PD++ +N++++G +S
Sbjct: 288 KLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
A +++ +++ + PNV SY +MIR + ++E ++ M + + D Y
Sbjct: 347 KKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 405
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ LI G LD + K+M + PD T NA++ + E ++ +M Q
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465
Query: 356 SGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+ I ++N+ +K F E +W+ ++ + + D +Y +LI GL G
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI-KKGICPDDNSYTVLIRGLISEGKSR 524
Query: 415 KALQVLEEAEHRGGDVDVFAYS 436
+A + LEE +G + Y+
Sbjct: 525 EACRYLEEMLDKGMKTPLIDYN 546
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 8/296 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL + + + EA LF K+ F P + ++ LLN + A + +
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 326
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ +NV+++ L + + A L M G P+ SY +I K+ + A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVM 263
+E FD+M + G++PD Y +I GF G K + ++E L ++E+ P+ +YN +
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I+ ++ I+ +M +NE + + T++ ++ N + + V+ +MI + +
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN-VISYNIFIKGLFENGKVE 378
PD + ++ GL GK E+ EEM G + +I YN F G+ E
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 559
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 5/245 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G +P + + N +L S + A K F + G PNV +Y ++I+ CK+ E A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
M GL+PD Y LI + L+ E+ EM E+G PD YN +I
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
++ ++++ E + P++ ++N++++ + +W+ M K
Sbjct: 447 MANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +Y+ LI GL G A R ++M+ + + ++ N + G+ E++
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIF 561
Query: 351 EEMGQ 355
EE+ Q
Sbjct: 562 EELAQ 566
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+YN M+ L++ +F + + E M K + FT + + + A +++
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA--MKAFAAAKERKKAVGIFEL 253
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
M + V T N +L+ L + +E+ L++++ + + N+++Y + + G +
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
EA IW ++ + L D + +++ GL ++ + A+++ + +G +V +Y+
Sbjct: 314 IEAARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 372
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
MI CK+ ++ A M G + + V LI GF L +++ L
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 172/380 (45%), Gaps = 50/380 (13%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHV-LRRVASDPTLLPHAPHI 66
+S + + L+ E +P AL+++ + + H SS Q + +RR+A I
Sbjct: 31 ISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAK----CRRFSDI 86
Query: 67 IGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLN 124
IE+ +N ++ P TL+++Y + SM + A+ F +MD+ R V SFN+LLN
Sbjct: 87 ETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAV-SFNALLN 145
Query: 125 AFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP 184
A S+ +++ + F + YN +I P
Sbjct: 146 ACLHSKNFDKVPQLFDEIP--------QRYNKII-------------------------P 172
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
DK SYG LI + G A+E+ +M +G+E + + I+ +K G+ A+ +W
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESL-EIWERMKKNERKHDVFTYSSLIHGLS 303
++++ N +YNV I +S E + E+ E M K D +Y+ L+
Sbjct: 233 NEMVKKGCELDNA-AYNVRI--MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC 289
Query: 304 QMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE---MGQSGSRN 360
+ G LD A++VY+ + G +P+ T ++ LC E+ + ++++ M + N
Sbjct: 290 ERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFN 349
Query: 361 VISYNIFIKGLFENGKVEEA 380
+ + + GL EN K ++A
Sbjct: 350 TLKH--LVVGLVENKKRDDA 367
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 150/333 (45%), Gaps = 6/333 (1%)
Query: 133 ERAEKFFAYFDTAGVSPNVETY--NVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
++A K +A SP Y + ++ L K R F + L+ ++ Y
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYS 106
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL-LR 249
TLI + + N A+ F++M + G + +N +++ S +F K ++++ + R
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR 166
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ P+ +SY ++I+ G +++EI +M+ + +++++ L + G L+
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFI 368
A ++ +M+ + D N + K E EL EEM G + + ISYN +
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
E G ++EA ++E L G A ++ T+ LI LC + + + +++ +
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNC-APNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHK 344
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
D ++ L + ++ DDA G++ + K+
Sbjct: 345 IPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y+ +IR + F+ ++ +E+M + ++++L++ N D +++ ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 320 GR--RVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRNVISYNIFIKGLFENGK 376
R ++ PD ++ ++ C G E++ E+ +M G+ I++ + L++ G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
+E A N+W ++ + +D+ Y + I K + +++EE G D +Y+
Sbjct: 225 LEVADNLWNEMV-KKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYN 282
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
++ A C+ LD+A V ++ C N LI
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+ +R L++C RFS+ + E K + + + YS+LI Q + A R ++ M
Sbjct: 72 LTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQY 131
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAM 381
V+ NA+LN ++ +L++E+ Q YN I
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR-------YNKIIP------------ 172
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
D +YGILI C +G KA++++ + + +G +V A+++++++
Sbjct: 173 --------------DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCN 471
L K+ L+ A + + M K+GC+L+ N
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYN 248
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 116 VRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLR 175
+ +F + AFA +++ ++A F VET N L+ L + + ++A+ L
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
+ P+ +Y L+N + +L A ++++M + G++PD++ +N++++G +S
Sbjct: 289 KLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
A +++ +++ + PNV SY +MIR + ++E ++ M + + D Y
Sbjct: 348 KKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ LI G LD + K+M + PD T NA++ + E ++ +M Q
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466
Query: 356 SGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+ I ++N+ +K F E +W+ ++ + + D +Y +LI GL G
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI-KKGICPDDNSYTVLIRGLISEGKSR 525
Query: 415 KALQVLEEAEHRGGDVDVFAYS 436
+A + LEE +G + Y+
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYN 547
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 8/296 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL + + + EA LF K+ F P + ++ LLN + A + +
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFT--PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 327
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+ P++ +NV+++ L + + A L M G P+ SY +I K+ + A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL--LREETVFPNVVSYNVM 263
+E FD+M + G++PD Y +I GF G K + ++E L ++E+ P+ +YN +
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I+ ++ I+ +M +NE + + T++ ++ N + + V+ +MI + +
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN-VISYNIFIKGLFENGKVE 378
PD + ++ GL GK E+ EEM G + +I YN F G+ E
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 5/245 (2%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
G +P + + N +L S + A K F + G PNV +Y ++I+ CK+ E A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
M GL+PD Y LI + L+ E+ EM E+G PD YN +I
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
++ ++++ E + P++ ++N++++ + +W+ M K
Sbjct: 448 MANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +Y+ LI GL G A R ++M+ + + ++ N + G+ E++
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIF 562
Query: 351 EEMGQ 355
EE+ Q
Sbjct: 563 EELAQ 567
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 259 SYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+YN M+ L++ +F + + E M K + FT + + + A +++
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA--MKAFAAAKERKKAVGIFEL 254
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKV 377
M + V T N +L+ L + +E+ L++++ + + N+++Y + + G +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
EA IW ++ + L D + +++ GL ++ + A+++ + +G +V +Y+
Sbjct: 315 IEAARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFKSL 490
MI CK+ ++ A M G + + V LI GF L +++ L
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 4/322 (1%)
Query: 8 LSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHII 67
L+P+ +L + + K+P L +QH ++ Y + ++ ++ + + ++
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQ-AKMYDEIEEVM 118
Query: 68 GAIEAAQNCNCSEDVPLTLLKAYAKRS-MPDEALNLFRKMDRVFGCRPGVRSFNSLLNAF 126
I+ + C SE+ L++ Y + + A+ + M FGC P +SFN +LN
Sbjct: 119 RTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPD-FGCWPSSKSFNFILNLL 177
Query: 127 AVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK 186
++ ++ K F GV + N+LIK LC+ E A LL RP+
Sbjct: 178 VSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNV 237
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER 246
++ LI +G A ++ + M + +EPD + +N++I G K G + ++ ER
Sbjct: 238 MTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLER 297
Query: 247 LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
++ + PN +Y ++ GL R E+ E+ +M + +Y ++ GL +
Sbjct: 298 -MKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Query: 307 NLDGAQRVYKDMIGRRVSPDVV 328
++ V + M+ P +
Sbjct: 357 SVVEMDWVLRQMVNHGFVPKTL 378
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 185 DKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMW 244
++F Y + G +N A+E+ M + G P +N I++ + F + ++++
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 245 ERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQ 304
+ V + N++I+GL G +L++ + + + + +V T+S LI G
Sbjct: 191 VSAPKL-GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN 249
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
G + A ++ + M R+ PD +T N +++GL K G+VEE +L E M G N +
Sbjct: 250 KGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGT 309
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
Y + GL + + EA + ++ + +Y ++ GLC+ + + VL +
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMIS-WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Query: 424 EHRG 427
+ G
Sbjct: 369 VNHG 372
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 2/210 (0%)
Query: 254 FPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQR 313
+P+ S+N ++ L F E +I+ K + D + LI GL + GNL+ A +
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLF 372
+ + ++ P+V+T + ++ G C GK EE+F+L E M + + I++NI I GL
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
+ G+VEE +++ E + + TY +++GL +A +++ + G
Sbjct: 284 KKGRVEEGIDLLERM-KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+Y M+ LC+ + + + V+ M G
Sbjct: 343 LSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 203 NAALEVFDEMSE--------------RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL- 247
N L++FD + + + +P Y ++I+ F ++ + + E+ +
Sbjct: 63 NEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIK 122
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
L + F YN+M + GR + ++EI M +++ +++ L
Sbjct: 123 LEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKL 182
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNI 366
D +++ V D N ++ GLC+ G +E + +L +E Q SR NV++++
Sbjct: 183 FDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSP 242
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I+G GK EEA + E + E + D+ T+ ILI GL K G + + + +LE + +
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKER-IEPDTITFNILISGLRKKGRVEEGIDLLERMKVK 301
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
G + + Y ++ L ++R +A ++S M G +
Sbjct: 302 GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMR 339
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
S+N FI L + K+ + ++ + + + +D+ ILI GLC++G L ALQ+L+E
Sbjct: 169 SFN-FILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDE 227
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ +V +S +I C + + ++A ++ M+K + +T N LI G K
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 12/350 (3%)
Query: 6 KPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPH 65
KPL L+ L KSE++P LF+ + + + + R+A L
Sbjct: 35 KPLEEPALVKL-KSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRL----DF 89
Query: 66 IIGAIEAAQNC--NCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
I +E + E + ++ Y K M +AL+ F MD ++GC+ V+SFN+ L
Sbjct: 90 IEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMD-LYGCKRSVKSFNAAL 148
Query: 124 NAFAVSEQWERAEKFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
+ + +F + G+ + ++N+ IK C+ + A +R M GL
Sbjct: 149 QVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGL 208
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
PD +Y TLI+A K +++ M +G +P++ +N+ I AN+
Sbjct: 209 TPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE-IWERMKKNERKHDVFTYSSLIHG 301
+ L+ + V P+ ++YN++I+G RF + E ++ M K ++ Y ++IH
Sbjct: 269 LL-LLMPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHY 326
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
L + GN D A + KD + ++ P++ T +L GL K G+++++ + E
Sbjct: 327 LCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 116/274 (42%), Gaps = 8/274 (2%)
Query: 192 LINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
+I K G AL+ F M G + V +N + + D + +WE L
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDL---HTIWEFLHDAP 168
Query: 252 TVFP---NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
+ + + VS+N+ I+ G + M+K+ DV TY++LI L +
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 228
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIF 367
++ M+ + P++ T N + L + ++ +L M + + I+YN+
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 368 IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
IKG F + A ++ + G+ + Y +IH LCK G + A + ++ +
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGK-GYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKK 347
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
++ ++ L K+ +LD A ++ L+ +R
Sbjct: 348 WYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%)
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
GC+P + +FN + + A V P+ TYN++IK R + A
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ + M G G +P+ Y T+I+ K G+ + A + + + P++ M++ G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 231 FFKSGDFLKANEMWERLLREETVF 254
K G +A + E + R F
Sbjct: 362 LVKKGQLDQAKSIMELVHRRVPPF 385
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 155/292 (53%), Gaps = 23/292 (7%)
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLR-WMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
GVS + + ++++K C + F K + ++ GL D F LI K G L
Sbjct: 116 GVSVDKFSLSLVLKA-CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
+ ++FD M +R D + YN +IDG+ K G + A E+++ + E N++S+N MI
Sbjct: 175 SRQMFDRMPKR----DSVSYNSMIDGYVKCGLIVSARELFDLMPME---MKNLISWNSMI 227
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G ++ S+ ++I ++ + + D+ +++S+I G + G ++ A+ ++ D++ RR
Sbjct: 228 SGYAQT---SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF-DVMPRR-- 281
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIW 384
DVVT M++G K G V + L+++M R+V++YN + G +N EA+ I+
Sbjct: 282 -DVVTWATMIDGYAKLGFVHHAKTLFDQMPH---RDVVAYNSMMAGYVQNKYHMEALEIF 337
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKA----LQVLEEAEHRGGDVDV 432
+ E+ L D TT I++ + + G L+KA L ++E+ + GG + V
Sbjct: 338 SDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV 389
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 166/348 (47%), Gaps = 21/348 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFA-VSEQWERAEKFFAYFD 143
+++ Y K + A LF M + S+NS+++ +A S+ + A K FA
Sbjct: 192 SMIDGYVKCGLIVSARELFDLMPMEM---KNLISWNSMISGYAQTSDGVDIASKLFADMP 248
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
++ ++N +I K E AKGL M R D ++ T+I+ AK G ++
Sbjct: 249 ----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGFVH 300
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
A +FD+M R DV+ YN ++ G+ ++ ++A E++ + +E + P+ + ++
Sbjct: 301 HAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ +++ GR S+++++ + + + +LI S+ G++ A V++ + + +
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMN 382
NAM+ GL G E +F++ ++ + S + I++ + +G V+E +
Sbjct: 417 D----HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLL 472
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
+EL+ + + YG ++ L ++G + A ++EE DV
Sbjct: 473 CFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV 520
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 44/242 (18%)
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
E V + S +++++ SR G ++I +KK D+F + LI + G L
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM---------------- 353
+++++ M R D V+ N+M++G K G + + EL++ M
Sbjct: 174 LSRQMFDRMPKR----DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISG 229
Query: 354 -GQSGS--------------RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
Q+ +++IS+N I G ++G++E+A +++++ D
Sbjct: 230 YAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVV 284
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
T+ +I G K G+++ A + ++ HR DV AY+SM+ + + +A + S M
Sbjct: 285 TWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDM 340
Query: 459 DK 460
+K
Sbjct: 341 EK 342
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 185/377 (49%), Gaps = 23/377 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+K Y+ + D A +F + C+ V S+N +++ + +++E + + +
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRR-----CKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
VSP T +++ K ++ + K + ++S P L+NA A G+++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL-LREETVFPNVVSYNVM 263
A+ +F M R DV+ + I+ G+ + G+ A ++++ +R+ +S+ +M
Sbjct: 290 AVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVRDR------ISWTIM 339
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I G R G F+ESLEI+ M+ D FT S++ + +G+L+ + + + ++
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNI 383
DVV NA+++ K G E++ +++ +M Q R+ ++ + GL NG+ +EA+ +
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ---RDKFTWTAMVVGLANNGQGQEAIKV 456
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE--AEHRGGDVDVFAYSSMINA 441
+ + + ++ D TY ++ +G +++A + + ++HR + + Y M++
Sbjct: 457 F-FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR-IEPSLVHYGCMVDM 514
Query: 442 LCKERRLDDAAGVVSLM 458
L + + +A ++ M
Sbjct: 515 LGRAGLVKEAYEILRKM 531
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 14/332 (4%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD-LNAALE 207
P+V +N +IK K + L M G+ PD ++ L+N + G L +
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ + + G+ ++ N ++ + G A +++R +E+ V S+N+MI G
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED-----VFSWNLMISGY 211
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
+R + ES+E+ M++N T ++ S++ + D +RV++ + + P +
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELL 387
NA++N G+++ + ++ M +R+VIS+ +KG E G ++ A ++ +
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMK---ARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
D ++ I+I G + G N++L++ E + G D F S++ A
Sbjct: 329 P-----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
L+ + + +DK K + V N LID + K
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ Y + +E+L +FR+M G P + S+L A A E E Y D
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSA-GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ +V N LI + K EKA+ + M + DKF++ ++ A G A
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD----QRDKFTWTAMVVGLANNGQGQEA 453
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
++VF +M + ++PD + Y ++ SG +A + + ++ + + P++V Y M+
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
L R G E+ EI +M N +S++ G L GA R++ D
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNP--------NSIV-----WGALLGASRLHND 552
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 195/420 (46%), Gaps = 61/420 (14%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
+ +Y + +EAL +F++M R S+N +++ + + ++E A K F
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEFELARKLFDEMP--- 122
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
++ ++NV+IK + R KA+ L M D S+ T+++ A+ G ++ A
Sbjct: 123 -ERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 207 EVFDEMSERG----------------VEPDVM-----------CYNMIIDGFFKSGDFLK 239
VFD M E+ +E M +N ++ GF K ++
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A + ++ + +VVS+N +I G ++ G+ E+ ++++ DVFT+++++
Sbjct: 238 ARQFFDSM-----NVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMV 288
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
G Q ++ A+ ++ M R + V+ NAML G + ++E + EL++ M R
Sbjct: 289 SGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP---CR 341
Query: 360 NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQV 419
NV ++N I G + GK+ EA N+++ + D ++ +I G ++G+ +AL++
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR-----DPVSWAAMIAGYSQSGHSFEALRL 396
Query: 420 LEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ E GG ++ ++SS ++ L+ + + K G + V N L+ + K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 187/412 (45%), Gaps = 70/412 (16%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
LL AY + S +EA LF+ + + S+N LL F ++ A +FF D+
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRENW-----ALVSWNCLLGGFVKKKKIVEARQFF---DS 244
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V +V ++N +I + + ++A+ L S V D F++ +++ + +
Sbjct: 245 MNVR-DVVSWNTIITGYAQSGKIDEARQLFD-ESPV---QDVFTWTAMVSGYIQNRMVEE 299
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP--NVVSYNV 262
A E+FD+M ER + + +N ++ G+ + A E+++ V P NV ++N
Sbjct: 300 ARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFD-------VMPCRNVSTWNT 348
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI--G 320
MI G ++CG+ SE+ ++++M K D +++++I G SQ G+ A R++ M G
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 321 RRV-----SPDVVTC----------------------------NAMLNGLCKWGKVEESF 347
R+ S + TC NA+L CK G +EE+
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 348 ELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
+L++EM ++++S+N I G +G E A+ +E + E L D T ++
Sbjct: 465 DLFKEM---AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLSAC 520
Query: 408 CKNGYLNKALQVLEEAEHRGGDV-DVFAYSSMINALCKERRLDDAAGVVSLM 458
G ++K Q G + + Y+ M++ L + L+DA ++ M
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 125/284 (44%), Gaps = 70/284 (24%)
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
++ +NV I R GR +E+L +++RM + +Y+ +I G + G + A++++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCK---WGKVEESFEL--------WEEM----GQSG--- 357
+M R D+V+ N M+ G + GK E FE+ W M Q+G
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 358 ----------SRNVISYNIFIKGLFENGKVEEAMNI-----------WELLLG------- 389
+N +S+N + +N K+EEA + W LLG
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 390 --------ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ D ++ +I G ++G +++A Q+ +E+ + DVF +++M++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSG 290
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
+ R +++A + M +R N N ++ G+++ + +
Sbjct: 291 YIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEM 330
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 166/350 (47%), Gaps = 31/350 (8%)
Query: 107 DRVFG--CRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKK 164
+RVF P V FN+++ +++ + FF+ + G+ + TY L+K
Sbjct: 56 NRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSL 115
Query: 165 REFEKAKGLLRWMSGVGL-RPDKFSYGT--LINAAAKRGDLNAALEVFDEMSERGVEPDV 221
+ K + + G R K G L + + GD A +VFDEMSER +V
Sbjct: 116 SDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD---AQKVFDEMSER----NV 168
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+ +N++I GF SGD + +++++ ++VS+N MI LS+CGR E+LE++
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSER-----SIVSWNSMISSLSKCGRDREALELFC 223
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC-NAMLNGLCKW 340
M D T +++ + +G LD + ++ + D +T NA+++ CK
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 341 GKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
G +E + ++ +M + RNV+S+N I G NGK E +++++ ++ E +A + T+
Sbjct: 284 GDLEAATAIFRKMQR---RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
Query: 401 ----------GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
G + G G + + ++ EH G VD+ + S I
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRIT 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 48/258 (18%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM--------- 305
PNV+ +N MI+ S G ESL + MK D +TY+ L+ S +
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 306 --------------------------GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
G + AQ+V+ +M R +VV N M+ G C
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER----NVVVWNLMIRGFCD 180
Query: 340 WGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT 399
G VE L+++M + R+++S+N I L + G+ EA+ ++ ++ + D T
Sbjct: 181 SGDVERGLHLFKQMSE---RSIVSWNSMISSLSKCGRDREALELFCEMI-DQGFDPDEAT 236
Query: 400 YGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAY-SSMINALCKERRLDDAAGVVSLM 458
++ G L+ + AE G D +++++ CK L+ A + M
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 459 DKRGCKLNTHVCNPLIDG 476
+R N N LI G
Sbjct: 297 QRR----NVVSWNTLISG 310
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 188/425 (44%), Gaps = 28/425 (6%)
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
E + L+ ++ K D+A L ++ R +++ L++ F + ++A + F
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEER-DIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
G++ ++ Y+VLI LCK ++ E A L + G+ PD+ G L+ + ++
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Query: 200 GDLNAALEVF-DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL---------- 248
+L+ EV ++ ++ V ++ Y + +GF ++ +A + L+
Sbjct: 367 SELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSE 423
Query: 249 -------REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
+ + P+ S +++I L + + ++ + + +N Y+++I G
Sbjct: 424 IVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEG 483
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV 361
+ + G + + ++ +M V P T N + L + + +L ++M G
Sbjct: 484 MCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPW 543
Query: 362 ISYNIF-IKGLFENGKVEEAMNIWELLLGETALA--VDSTTYGILIHGLCKNGYLNKALQ 418
I + F +K L ENG+ +A + + GE L V ST I GL KN +++ L+
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA---AIDGLIKNEGVDRGLE 600
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFI 478
+ + G DV AY +I ALCK R +A + + M +G K N +IDG+
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 479 KNSNL 483
K +
Sbjct: 661 KEGEI 665
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+++ K +E+L L +M G P + N + A + A
Sbjct: 480 IIEGMCKEGRSEESLKLLGEMKDA-GVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P ++ L+K LC+ A L ++G G + I+ K ++
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
LE+F ++ G PDV+ Y+++I K+ ++A+ ++ ++ + + P V +YN MI
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV-SKGLKPTVATYNSMID 657
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + G L RM ++E+ DV TY+SLIHGL G A + +M G+ P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM 353
+ +T A++ GLCK G E+ + EM
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREM 745
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 26/335 (7%)
Query: 149 PNVETYNVLIKVLCKKRE--FEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
PN TYN L++ + K E + L+ M G DKF+ ++ G AL
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
VF+E+ RG D +++ F K G KA E+ E +L E + N +Y V+I G
Sbjct: 235 SVFNEILSRG-WLDEHISTILVVSFCKWGQVDKAFELIE-MLEERDIRLNYKTYCVLIHG 292
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD 326
+ R ++ +++E+M++ D+ Y LI GL + +L+ A +Y ++ + PD
Sbjct: 293 FVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Query: 327 VVTCNAMLNGLCKWGKVEESFELWEE-MGQSGSRNV-ISYNIFIKGLFENGKVEEAMNIW 384
+ LC + + E + E +G ++V + Y +G N V EA +
Sbjct: 353 RGILGKL---LCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFI 409
Query: 385 ELLLG-----------------ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ L+G A+ DS + I+I+ L K ++ A+ +L + G
Sbjct: 410 QNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNG 469
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
Y+++I +CKE R +++ ++ M G
Sbjct: 470 LIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAG 504
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 123 LNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL 182
++ +E +R + F G P+V Y+VLIK LCK +A L M GL
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+P +Y ++I+ K G+++ L M E PDV+ Y +I G SG +A
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
W + + + +PN +++ +I+GL +CG E+L + M++ E + D Y SL+
Sbjct: 706 RWNEM-KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSF 764
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
N++ ++++M+ + P V N ML
Sbjct: 765 LSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 13/358 (3%)
Query: 4 LPKPLSPHRLLNLLKSEKNPHSALQLFQHATRH---PGYTHSSAVLQHVLRRVASDPTLL 60
LP S ++N L A+ L ++ PG + +++ + + S+ +L
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 61 PHAPHIIGAIEAAQ-NCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSF 119
+E +Q NC + A+R AL+L +KM R +G P ++
Sbjct: 496 LLGEMKDAGVEPSQFTLNC-------IYGCLAERCDFVGALDLLKKM-RFYGFEPWIKHT 547
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
L+ + + A K+ G ++ I L K ++ L R +
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G PD +Y LI A K A +F+EM +G++P V YN +IDG+ K G+ +
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
R+ +E P+V++Y +I GL GR SE++ W MK + + T+ +LI
Sbjct: 668 GLSCIVRMYEDEKN-PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
GL + G A +++M + + PD ++++ + F ++ EM G
Sbjct: 727 QGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 15/306 (4%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
+ PD S +IN K ++ A+ + ++ + G+ P M YN II+G K G ++
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG---RS 490
Query: 241 NEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK----KNERKHDVFT 294
E + L +++ V P+ + N + L+ F +L++ ++M+ + KH F
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF- 549
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
L+ L + G A + D+ G +V A ++GL K V+ EL+ ++
Sbjct: 550 ---LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 355 QSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+G +VI+Y++ IK L + + EA ++ ++ + L TY +I G CK G +
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK-GLKPTVATYNSMIDGWCKEGEI 665
Query: 414 NKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
++ L + + DV Y+S+I+ LC R +A + M + C N L
Sbjct: 666 DRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMAL 725
Query: 474 IDGFIK 479
I G K
Sbjct: 726 IQGLCK 731
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 21/344 (6%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAA 205
+SP + T V+ VL + + A W S G R D ++Y + + + R NA+
Sbjct: 67 LSPELNT-KVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILS-RARQNAS 124
Query: 206 LE--VFDEMSERG-VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
L+ V D ++ R + P + I +G +A+ +++R+ PN +YN
Sbjct: 125 LKALVVDVLNSRCFMSPGA--FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERK----HDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
++ +S+ S S+E+ E K R D FT + ++ G + A V+ ++
Sbjct: 183 LLEAISKSN--SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI 240
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKV 377
+ R + ++ ++ CKWG+V+++FEL E + + R N +Y + I G + ++
Sbjct: 241 LSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRI 299
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
++A ++E + + D Y +LI GLCK+ L AL + E + G D
Sbjct: 300 DKAFQLFE-KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 438 MINALCKERRLDDAAGV-VSLMDKRGCKLNTHVCNPLIDGFIKN 480
++ + +E L V + +DK+ L + L +GFI+N
Sbjct: 359 LLCSFSEESELSRITEVIIGDIDKKSVML---LYKSLFEGFIRN 399
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 14/245 (5%)
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH-DVFTYSSLIHGLSQMGN 307
++E ++ +YN M LSR R + SL+ N R + I L G
Sbjct: 98 KQEGYRNDMYAYNAMASILSR-ARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGL 156
Query: 308 LDGAQRVYKDM--IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE----EMGQSGSR-N 360
+D A V+ + +G V P+ T N +L + K S EL E EM G +
Sbjct: 157 VDEASSVFDRVREMGLCV-PNAYTYNCLLEAISKSNS--SSVELVEARLKEMRDCGFHFD 213
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+ ++ GK E A++++ +L L D IL+ CK G ++KA +++
Sbjct: 214 KFTLTPVLQVYCNTGKSERALSVFNEILSRGWL--DEHISTILVVSFCKWGQVDKAFELI 271
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
E E R ++ Y +I+ KE R+D A + M + G + + + LI G K+
Sbjct: 272 EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 481 SNLTL 485
+L +
Sbjct: 332 KDLEM 336
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 174/395 (44%), Gaps = 45/395 (11%)
Query: 2 VDLPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVA------- 54
+ L K L L + S NP L+ +++A+ G+ HSS L +L +
Sbjct: 67 IHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQ 126
Query: 55 ----------SDPTLLPHAPHIIGAI--EAAQNCNCSEDVPL------------------ 84
D +L+ +P + + A+ C+ + V
Sbjct: 127 IWELLIETKRKDRSLI--SPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFN 184
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
LL+ + +A N++ + F +P +++FN LL+ + SE+ AE FF
Sbjct: 185 ALLRTLCQEKSMTDARNVYHSLKHQF--QPDLQTFNILLSGWKSSEE---AEAFFEEMKG 239
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ P+V TYN LI V CK RE EKA L+ M PD +Y T+I G +
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A EV EM E G PDV YN I F + A+++ + +++ + + PN +YN+
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVK-KGLSPNATTYNLFF 358
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R LS S E++ RM NE + + LI + +D A R+++DM+ +
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 418
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
+ + +L+ LC KVEE+ + EM + G R
Sbjct: 419 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHR 453
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 224 YNMIIDGFFKS-----------GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGR 272
Y I GF+ S G K +++WE L+ + +++S M L R +
Sbjct: 97 YASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAK 156
Query: 273 FSESLEIWERMKKNERK----HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ E K +R D +++L+ L Q ++ A+ VY + + PD+
Sbjct: 157 LCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQ 215
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELL 387
T N +L+G W EE+ +EEM G + +V++YN I ++ ++E+A + + +
Sbjct: 216 TFNILLSG---WKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKM 272
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERR 447
E D TY +I GL G +KA +VL+E + G DV AY++ I C RR
Sbjct: 273 REEEETP-DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCN 471
L DA +V M K+G N N
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYN 355
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 12/251 (4%)
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK-H 290
F G+ ++ E + + + S + M+ L R +F + IWE + + +RK
Sbjct: 83 FSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQ---IWELLIETKRKDR 139
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIG-RRVSPDV--VTC-NAMLNGLCKWGKVEES 346
+ + ++ L ++ L ++ + +R+ PD C NA+L LC+ + ++
Sbjct: 140 SLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDA 199
Query: 347 FELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
++ + ++ ++NI + G K E + + L D TY LI
Sbjct: 200 RNVYHSLKHQFQPDLQTFNILLSGW----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDV 255
Query: 407 LCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
CK+ + KA +++++ DV Y+++I L + D A V+ M + GC +
Sbjct: 256 YCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD 315
Query: 467 THVCNPLIDGF 477
N I F
Sbjct: 316 VAAYNAAIRNF 326
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 166/364 (45%), Gaps = 7/364 (1%)
Query: 131 QWERAEKFFAYF-DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+WE A + F + PNV Y LI +L K ++ EKA L + M G + Y
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 190 GTLINAAAKRGDLNAALEVFDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
L++A ++ G +AA + + M S +PDV Y+++I F + F K ++ +
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM- 247
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSE-SLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
R + + PN ++YN +I + F E + + + +++ K D +T +S + G
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNI 366
++ + Y+ + P++ T N +L+ K G ++ + E M + S +++YN+
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
I G +++ ++ L+ E T L+ + +K VL E+
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFP-SCVTLCSLVRAYGRASKADKIGGVLRFIENS 426
Query: 427 GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLL 486
+D+ ++ +++A + + + GV+ LM+K+G K + ++ + + S +T
Sbjct: 427 DIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY-RISGMTTH 485
Query: 487 FKSL 490
K L
Sbjct: 486 VKEL 489
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 5/313 (1%)
Query: 61 PHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
P H + + C + +V L+ AY++ D A L +M C+P V +++
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYS 225
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREF-EKAKGLLRWMSG 179
L+ +F +++ + + G+ PN TYN LI K + F E L++ +
Sbjct: 226 ILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGE 285
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
+PD ++ + + A G + +++ G+EP++ +N+++D + KSG++ K
Sbjct: 286 DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH-DVFTYSSL 298
+ + E + + + +V+YNV+I R G + +E R+ ++ER T SL
Sbjct: 346 MSAVMEYMQKYHYSW-TIVTYNVVIDAFGRAGDLKQ-MEYLFRLMQSERIFPSCVTLCSL 403
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
+ + D V + + + D+V N +++ + K E + E M + G
Sbjct: 404 VRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGF 463
Query: 359 R-NVISYNIFIKG 370
+ + I+Y +K
Sbjct: 464 KPDKITYRTMVKA 476
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 166/347 (47%), Gaps = 23/347 (6%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+ +++ +A+ +++ A + ++P T++ L+K ++ L R
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN----LGRQFH 172
Query: 179 GVGLRPDKFSY----GTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
R F + T+I+ K ++ A +VFDEM ER DV+ + +I + +
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER----DVISWTELIAAYARV 228
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G+ A E++E L ++ +V++ M+ G ++ + E+LE ++RM+K+ + D T
Sbjct: 229 GNMECAAELFESLPTKD-----MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPD--VVTCNAMLNGLCKWGKVEESFELWEE 352
+ I +Q+G A R + SP VV +A+++ K G VEE+ ++
Sbjct: 284 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS 343
Query: 353 MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
M ++NV +Y+ I GL +G+ +EA++++ ++ +T + ++ T+ + +G
Sbjct: 344 MN---NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 413 LNKALQVLEEAEHRGGDVDVF-AYSSMINALCKERRLDDAAGVVSLM 458
+++ QV + G Y+ M++ L + RL +A ++ M
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 13/285 (4%)
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
+LN ++ + +G++ +I K G + + + R + E F N +
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPM---DPYARRVIEPVQFRNPFLW 117
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
+IRG + G+F E++ ++ M+K E FT+S+L+ M +L+ ++ +
Sbjct: 118 TAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR 177
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
R V N M++ K ++ + ++++EM + R+VIS+ I G +E A
Sbjct: 178 LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPE---RDVISWTELIAAYARVGNMECA 234
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
++E L + D + ++ G +N +AL+ + E G D + I+
Sbjct: 235 AELFESLPTK-----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVC--NPLIDGFIKNSNL 483
A + A V + K G + HV + LID + K N+
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNV 334
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 7/340 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT- 144
L K PD+A LF M G +P + + SL++ + SE ++A Y +
Sbjct: 150 LFKVLGNCKQPDQASLLFEVMLSE-GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSV 208
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ P+V T+ VLI CK F+ K ++ MS +G+ +Y T+I+ K G
Sbjct: 209 SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 205 ALEVFDEMSERGVE-PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
V +M E G PDV N II G + +G ++ E W + V P++ ++N++
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNIL 327
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
I + G + + + + M+K TY+ +I + G ++ V++ M + V
Sbjct: 328 ILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMN 382
P+ +T +++N K G V + + ++ S + +N I + G +
Sbjct: 388 KPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKE 447
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ + + E D T+ +I +G + A+Q LE+
Sbjct: 448 LY-IQMEERKCKPDKITFATMIKTYTAHGIFD-AVQELEK 485
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 155/368 (42%), Gaps = 38/368 (10%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
AL +F + + P +++ L +Q ++A F + G+ P ++ Y LI
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 159 KVLCKKREFEKAKGLLRWMSGVG-LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
V K +KA L +M V +PD F++ LI+ K G + + EMS GV
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+ YN IIDG+ K+G F + + ++ + P+V + N +I G GR +
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKM 305
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
E W YS L G Q PD+ T N ++
Sbjct: 306 ESW--------------YSRF--------QLMGVQ------------PDITTFNILILSF 331
Query: 338 CKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K G ++ + + M + S ++YNI I+ + G++E+ +++ + + + +
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ-GVKPN 390
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
S TY L++ K G + K VL + + +D ++ +INA + L +
Sbjct: 391 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 450
Query: 457 LMDKRGCK 464
M++R CK
Sbjct: 451 QMEERKCK 458
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 78 CSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
CS T++ Y K M +E ++ M P V + NS++ ++ + E
Sbjct: 248 CSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMES 307
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA 197
+++ F GV P++ T+N+LI K ++K ++ +M +Y +I
Sbjct: 308 WYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFG 367
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
K G + +VF +M +GV+P+ + Y +++ + K+G +K + + +++ + V +
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL-DT 426
Query: 258 VSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+N +I + G + E++ +M++ + K D T++++I + G D Q + K
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 318 MIGRRV 323
MI +
Sbjct: 487 MISSDI 492
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 141/318 (44%), Gaps = 5/318 (1%)
Query: 61 PHAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
P ++ + ++ + DV +L+ Y K + D+A + M V C+P V +F
Sbjct: 160 PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFT 219
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
L++ +++ + GV + TYN +I K FE+ + +L M
Sbjct: 220 VLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIED 279
Query: 181 GLR-PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G PD + ++I + ++ + GV+PD+ +N++I F K+G + K
Sbjct: 280 GDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKK 339
Query: 240 ANEMWERLLREETVFP-NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+ + + E+ F V+YN++I + GR + +++ +MK K + TY SL
Sbjct: 340 MCSVMDFM--EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSL 397
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
++ S+ G + V + ++ V D N ++N + G + EL+ +M +
Sbjct: 398 VNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC 457
Query: 359 R-NVISYNIFIKGLFENG 375
+ + I++ IK +G
Sbjct: 458 KPDKITFATMIKTYTAHG 475
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 6/291 (2%)
Query: 193 INAAAKRGDLNAALEVFDEMSERG-VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREE 251
++ A K +AL++F+ + ++ EP Y + +A+ ++E +L E
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVML-SE 173
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK-NERKHDVFTYSSLIHGLSQMGNLDG 310
+ P + Y +I + ++ E MK ++ K DVFT++ LI ++G D
Sbjct: 174 GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDL 233
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR--NVISYNIFI 368
+ + +M V VT N +++G K G EE + +M + G +V + N I
Sbjct: 234 VKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII 293
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG 428
G + NG+ M W + D TT+ ILI K G K V++ E R
Sbjct: 294 -GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFF 352
Query: 429 DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ Y+ +I K R++ V M +G K N+ L++ + K
Sbjct: 353 SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 148/305 (48%), Gaps = 17/305 (5%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A+++F+ + P + +N++ A+S A K + + G+ PN T+ ++
Sbjct: 87 AISVFKTIQE-----PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
K K + F++ + + + +G D + + +LI+ + G L A +VFD+ R
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR--- 198
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
DV+ Y +I G+ G A ++++ E +VVS+N MI G + G + E+LE
Sbjct: 199 -DVVSYTALIKGYASRGYIENAQKLFD-----EIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
+++ M K + D T +++ +Q G+++ ++V+ + ++ NA+++
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 339 KWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
K G++E + L+E + ++VIS+N I G +EA+ +++ +L D T
Sbjct: 313 KCGELETACGLFERLPY---KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 399 TYGIL 403
IL
Sbjct: 370 MLSIL 374
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 163/374 (43%), Gaps = 56/374 (14%)
Query: 76 CNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERA 135
C+ V +L+ Y + ++A +F K V S+ +L+ +A E A
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH-----RDVVSYTALIKGYASRGYIENA 219
Query: 136 EKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
+K F D V +V ++N +I + +++A L + M +RPD+ + T+++A
Sbjct: 220 QKLF---DEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFP 255
A+ G + +V + + G ++ N +ID + K G+ A ++ERL +
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL-----PYK 330
Query: 256 NVVSYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYS------------------ 296
+V+S+N +I G + + E+L +++ M + E +DV S
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 297 ------------------SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
SLI ++ G+++ A +V+ ++ + +S + NAM+ G
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFA 446
Query: 339 KWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
G+ + SF+L+ M + G + + I++ + +G ++ +I+ + + +
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 398 TTYGILIHGLCKNG 411
YG +I L +G
Sbjct: 507 EHYGCMIDLLGHSG 520
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 56/295 (18%)
Query: 68 GAIEAAQNCNCSEDVPL-------TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN 120
G IE AQ +++P+ ++ YA+ EAL LF+ M + RP +
Sbjct: 214 GYIENAQKL--FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMV 270
Query: 121 SLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
++++A A S E + + D G N++ N LI + K E E A GL +
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP-- 328
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP-DVMCYNMI------------ 227
D S+ TLI AL +F EM G P DV +++
Sbjct: 329 --YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 228 ------------------------IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
ID + K GD A++++ +L + ++ S+N M
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-----SLSSWNAM 441
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
I G + GR S +++ RM+K + D T+ L+ S G LD + +++ M
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 164/362 (45%), Gaps = 27/362 (7%)
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
+ AVS +K + +T S + N I + ++A+ + R MS +
Sbjct: 23 STLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSI- 81
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG-DFLKANE 242
S+ +I+A A+ G ++ A +VFDEM R YN +I K+ D KA E
Sbjct: 82 ---VSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS----YNAMITAMIKNKCDLGKAYE 134
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
++ + + N VSY MI G R GRF E+ ++ R D + L+ G
Sbjct: 135 LFCDIPEK-----NAVSYATMITGFVRAGRFDEAEFLYAETPVKFR--DSVASNVLLSGY 187
Query: 303 SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVI 362
+ G + A RV++ M + +VV+C++M++G CK G++ ++ L++ M + RNVI
Sbjct: 188 LRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTE---RNVI 240
Query: 363 SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ I G F+ G E+ ++ + E + V+S T ++ + Q+
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 423 AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSN 482
+ D+F +S+++ K + +A V +M + ++ N LI G ++
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQ 356
Query: 483 LT 484
++
Sbjct: 357 IS 358
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 179/371 (48%), Gaps = 22/371 (5%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
S+ +++ F + +++ AE F Y +T + NVL+ + ++ +A +R
Sbjct: 146 SYATMITGFVRAGRFDEAE--FLYAETPVKFRDSVASNVLLSGYLRAGKWNEA---VRVF 200
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
G+ ++ + S ++++ K G + A +FD M+ER +V+ + +IDG+FK+G F
Sbjct: 201 QGMAVK-EVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFF 255
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
++ R+ +E V N + VM + R+ E +I + + + D+F +S
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNS 315
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
L+ S++G + A+ V+ M + D V+ N+++ GL + ++ E++EL+E+M
Sbjct: 316 LMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKM---P 368
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
++++S+ IKG G++ + + ++ ++ + D+ T+ +I NGY +AL
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK-----DNITWTAMISAFVSNGYYEEAL 423
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ + + + +SS+++A L + + + K + V N L+ +
Sbjct: 424 CWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMY 483
Query: 478 IKNSNLTLLFK 488
K N +K
Sbjct: 484 CKCGNTNDAYK 494
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 144/303 (47%), Gaps = 25/303 (8%)
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
GV D S+ +LI +R ++ A E+F++M + D++ + +I GF G+
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEIS 389
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
K E++ + ++ + ++ MI G + E+L + +M + E + +T+SS+
Sbjct: 390 KCVELFGMMPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
+ + + +L +++ ++ + D+ N++++ CK G ++++++ + +
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP-- 502
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
N++SYN I G NG ++A+ ++ +L + + T+ L+ GY++ +
Sbjct: 503 -NIVSYNTMISGYSYNGFGKKALKLFS-MLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 419 VLEEAEHR-----GGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPL 473
+ + G D Y+ M++ L + LDDA+ ++S M CK ++ V L
Sbjct: 561 YFKSMKSSYNIEPGPD----HYACMVDLLGRSGLLDDASNLISTMP---CKPHSGVWGSL 613
Query: 474 IDG 476
+
Sbjct: 614 LSA 616
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 123/276 (44%), Gaps = 27/276 (9%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPG--VRSFNSLLNAFAVSEQWERAEKFFAYF 142
+L+ +R EA LF KM PG + S+ ++ F+ + + + F
Sbjct: 346 SLITGLVQRKQISEAYELFEKM-------PGKDMVSWTDMIKGFSGKGEISKCVELF--- 395
Query: 143 DTAGVSPNVE--TYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
G+ P + T+ +I +E+A M + P+ +++ ++++A A
Sbjct: 396 ---GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
DL L++ + + + D+ N ++ + K G+ A +++ + PN+VSY
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE-----PNIVSY 507
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
N MI G S G ++L+++ ++ + ++ + T+ +L+ +G +D + +K M
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Query: 321 R---RVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
PD C M++ L + G ++++ L M
Sbjct: 568 SYNIEPGPDHYAC--MVDLLGRSGLLDDASNLISTM 601
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 71/343 (20%)
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
YN ++ VL K R FE+ + MS ++ +Y L+N A ++ A+ VF+
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 214 ERGVEPDVMCY----------------------------------NMIIDGFFKSGDFLK 239
E G++ D++ + NMI++G+ G+ +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A W+ ++ + P+VVSY MI L++ G+ +++E++ M R DV +++I
Sbjct: 266 AKRFWKDIIASKCR-PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM---GQS 356
L + A V++++ + P+VVT N++L LCK + E+ +EL EEM G S
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 357 GSRNVIS--------------------------------YNIFIKGLFENGKVEEAMNIW 384
S N ++ YN+ + + K E+ IW
Sbjct: 385 CSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
+ + L D TY I IHGL G + +AL +E +G
Sbjct: 445 S-EMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 8/261 (3%)
Query: 99 ALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
A LF R FGC +++ N +LN + V A++F+ + P+V +Y +I
Sbjct: 232 AETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI 289
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
L KK + KA L R M PD +I+A + + ALEVF E+SE+G +
Sbjct: 290 NALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD 349
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERL-LREETVFPNVVSYNVMIRGLSRCGRFSESL 277
P+V+ YN ++ K K E+ E + L+ + PN V+++ +++ R S+ +
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQR----SKDV 405
Query: 278 EI-WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+I ERM KN+ + Y+ + Q + + ++ +M + PD T ++G
Sbjct: 406 DIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHG 465
Query: 337 LCKWGKVEESFELWEEMGQSG 357
L GK+ E+ ++EM G
Sbjct: 466 LHTKGKIGEALSYFQEMMSKG 486
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
YN ++ L + RF E ++++ M K + + TY L++ + +D A V++
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEE 379
+ D+V + +L LC++ VE + L+ + ++ + N+ + G G V E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
A W+ ++ + D +YG +I+ L K G L KA+++ + DV +++I
Sbjct: 266 AKRFWKDIIA-SKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 440 NALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+ALC ++R+ +A V + ++G N N L+ K
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 19/371 (5%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTA-GVSPNVETYNVLIKVLCKKREFEKAKGLLRW 176
SF + W + FF++ P+V Y +++++ + + + A+
Sbjct: 154 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLE 213
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
M VG PD + GT++ A+ G +A L + + ER + YN ++ K
Sbjct: 214 MLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSF 273
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
K ++W ++ EE V PN +Y +++ ++ G E+L+ + MK + TYS
Sbjct: 274 HGKVIDLWLEMV-EEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYS 332
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
S+I + G+ + A +Y+DM + + P TC ML+ K ++ L+ +M
Sbjct: 333 SVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM--- 389
Query: 357 GSRNVISYNIFIKGLF-----ENGKVEEAMNIWELLLGETA---LAVDSTTYGILIHGLC 408
RN I + I+GL + G +A +++E ET L D TY +
Sbjct: 390 -ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE----ETERLNLLADEKTYLAMSQVHL 444
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+G + KAL V+E + R + FAY M+ K + +D A + K G +
Sbjct: 445 NSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLP-DAS 503
Query: 469 VCNPLIDGFIK 479
CN +++ + +
Sbjct: 504 SCNDMLNLYTR 514
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 179/400 (44%), Gaps = 12/400 (3%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L + K+S + ++L+ +M G P ++ +++++A E A K F +
Sbjct: 264 MLSSLQKKSFHGKVIDLWLEMVEE-GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSL 322
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G P TY+ +I + K ++EKA GL M G+ P ++ T+++ K + A
Sbjct: 323 GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKA 382
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L +F +M + D + +II + K G F A M+E R + + +Y M +
Sbjct: 383 LSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER-LNLLADEKTYLAMSQ 441
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G ++L++ E MK + F Y ++ +++ N+D A+ ++ + + P
Sbjct: 442 VHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFR-ALSKTGLP 500
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIW 384
D +CN MLN + E++ ++ M ++ Y ++ + G V EA ++
Sbjct: 501 DASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Query: 385 ELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCK 444
+ +G A D+ L + +K VL ++ +DV A M+N K
Sbjct: 561 -VKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQ-----LDVMALGLMLNLRLK 614
Query: 445 ERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
E L++ +++LM K L + N +I F++ +++
Sbjct: 615 EGNLNETKAILNLMFK--TDLGSSAVNRVISSFVREGDVS 652
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 181/440 (41%), Gaps = 58/440 (13%)
Query: 79 SEDVPLT------LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQW 132
+ D+PL+ +L+ YAK D A FR + + P S N +LN +
Sbjct: 461 TRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT--GLPDASSCNDMLNLYTRLNLG 518
Query: 133 ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLL------------RWMSGV 180
E+A+ F V ++E Y ++V CK+ +A+ L+ R++ +
Sbjct: 519 EKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTL 578
Query: 181 G------------------LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
+ D + G ++N K G+LN + + M + + +
Sbjct: 579 AESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV 638
Query: 223 CYNMIIDGFFKSGDFLKANEMWERLLR------EETVFPNVVSYNVMIRGLSRCGRFSES 276
N +I F + GD KA + + ++R EET+ + Y R + E+
Sbjct: 639 --NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYG-------RQHKLKEA 689
Query: 277 LEIWERMKKNERKH-DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLN 335
++ + E K S+I + G L+ A ++ + + P VT + ++N
Sbjct: 690 KRLY--LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVN 747
Query: 336 GLCKWGKVEESFELWEE-MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
L GK E+ + + ++ + + YN IK + E GK++ A I+E + + +
Sbjct: 748 ALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM-HTSGVP 806
Query: 395 VDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGV 454
TY +I + L+KA+++ A G +D Y++MI K ++ +A +
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Query: 455 VSLMDKRGCKLNTHVCNPLI 474
S M K+G K T N ++
Sbjct: 867 FSEMQKKGIKPGTPSYNMMV 886
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 167/380 (43%), Gaps = 10/380 (2%)
Query: 100 LNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIK 159
LNL K D G + N ++++F +AE G+ ET LI
Sbjct: 625 LNLMFKTDL------GSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIA 678
Query: 160 VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP 219
V ++ + ++AK L +G P K ++I+A + G L A +F E +E+G +P
Sbjct: 679 VYGRQHKLKEAKRLY-LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDP 737
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEI 279
+ +++++ G +A E R E+ + + V YN +I+ + G+ + EI
Sbjct: 738 GAVTISILVNALTNRGKHREA-EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
+ERM + + TY+++I + LD A ++ + + D M+ K
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGK 856
Query: 340 WGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDST 398
GK+ E+ L+ EM + G + SYN+ +K + ++ ++ + D +
Sbjct: 857 GGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLS 915
Query: 399 TYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
TY LI ++ +A + + + +G + +SS+++AL K +++A M
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Query: 459 DKRGCKLNTHVCNPLIDGFI 478
+ G ++ ++ G++
Sbjct: 976 SEAGISPDSACKRTILKGYM 995
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N+L+ A + + + A + + T+GV +++TYN +I V + + +KA +
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
GL D+ Y +I K G ++ AL +F EM ++G++P YNM++ S
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+ +E+ + + R ++ +Y +I+ + +F+E+ + +K+ +SSL
Sbjct: 897 EVDELLQAMERNGRC-TDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSL 955
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
+ L + G ++ A+R Y M +SPD +L G G E+ +E+M +S
Sbjct: 956 LSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRS 1013
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 139/344 (40%), Gaps = 37/344 (10%)
Query: 80 EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF 139
E+ TL+ Y ++ EA L+ PG S+++A+ E A F
Sbjct: 670 EETIATLIAVYGRQHKLKEAKRLYLAAGE--SKTPGKSVIRSMIDAYVRCGWLEDAYGLF 727
Query: 140 AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
G P T ++L+ L + + +A+ + R + D Y TLI A +
Sbjct: 728 MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA 787
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR-----EETVF 254
G L A E+++ M GV + YN +I + + KA E++ R +E ++
Sbjct: 788 GKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIY 847
Query: 255 PNVV-----------------------------SYNVMIRGLSRCGRFSESLEIWERMKK 285
N++ SYN+M++ + E E+ + M++
Sbjct: 848 TNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMER 907
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
N R D+ TY +LI ++ A++ + + + +++L+ L K G +EE
Sbjct: 908 NGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEE 967
Query: 346 SFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
+ + +M ++G S + +KG G E+ + +E ++
Sbjct: 968 AERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMI 1011
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 69 AIEAAQNCNCS-----EDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLL 123
AIE N S E + ++ Y K EAL+LF +M + G +PG S+N ++
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK-GIKPGTPSYNMMV 886
Query: 124 NAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLR 183
A S ++ + G ++ TY LI+V + +F +A+ + + G+
Sbjct: 887 KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEM 243
+ +L++A K G + A + +MSE G+ PD C I+ G+ GD K
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 244 WERLLR 249
+E+++R
Sbjct: 1007 YEKMIR 1012
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 176/433 (40%), Gaps = 55/433 (12%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQ----LFQHATRHPGYTHSSAVLQHVLRRVASDPTLL 60
P +S R L + + + + LQ + S+ + VLRR DP
Sbjct: 18 PSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRC--DPNQF 75
Query: 61 PHAPHII---GAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVR 117
G + + ++ +LK AK + + +RK + C V+
Sbjct: 76 QSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEE----CFVNVK 131
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
+ +L + + A F V + YN++I++ K + A L++ M
Sbjct: 132 TMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEM 191
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
VGL PD +Y ++IN G ++ A + EMS+ + + Y+ I++G KSGD
Sbjct: 192 DCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDM 251
Query: 238 LKANEMWERLLREE---TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN-------- 286
+A E+ + +E+ + PN V+Y ++I+ R E+L + +RM
Sbjct: 252 ERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVT 311
Query: 287 ---------ERKHDVFTYSSLIHGLSQMGNL-------------------DGAQRVYKDM 318
E DV S LI L ++G + + A+++++ M
Sbjct: 312 ACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLM 371
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI---FIKGLFENG 375
+ R V PD + C+ + LC + + F L++E+ + ++ I +I + GL + G
Sbjct: 372 LVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQG 431
Query: 376 KVEEAMNIWELLL 388
EA + + +L
Sbjct: 432 NSWEAAKLAKSML 444
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 43/238 (18%)
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNL 308
R+E F NV + +++ ++ E+L + + + D Y+ +I + G+L
Sbjct: 122 RKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDL 181
Query: 309 DGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFI 368
+ A + K+M + PDV+T Y I
Sbjct: 182 NIADMLIKEMDCVGLYPDVIT----------------------------------YTSMI 207
Query: 369 KGLFENGKVEEAMNIWELL--LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHR 426
G GK+++A W L + + ++S TY ++ G+CK+G + +AL++L E E
Sbjct: 208 NGYCNAGKIDDA---WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE 264
Query: 427 GG----DVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
G + Y+ +I A C++RR+++A V+ M RGC N LI G ++N
Sbjct: 265 DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
E + D+ Y ++I G LN A +++E + G DV Y+SMIN C ++D
Sbjct: 158 EFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKID 217
Query: 450 DAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
DA + M K C LN+ + +++G K+ ++
Sbjct: 218 DAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDM 251
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 9 SPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIG 68
SP R+ L+ S+ +P A ++F +A++ P + HS + ++ ++ ++I
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF-----NLID 104
Query: 69 AIEAAQNCNCSEDVPLT------LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSL 122
+ A S PLT L+K YA+ +P++ L+ F KM F P + N +
Sbjct: 105 DVLAKHR---SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLE-FNFTPQPKHLNRI 160
Query: 123 LNAFAVSEQW-ERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
L+ + ++A + F GV PN +YN+L++ C + A L M
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ PD SY LI ++G +N A+E+ D+M +G PD +I G G F +
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGK 276
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+ E ++ + P+ N +++G G+ E+ ++ E + KN
Sbjct: 277 KYLEEMI-SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 145/324 (44%), Gaps = 23/324 (7%)
Query: 142 FDTAGVSPNV----ETYNVLIKVLCKKREFEKAKGLL--RWMSGVGLRPDKFSYGTLINA 195
FD A PN ++ +LI L + R F +L SG L + F+Y + A
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL-KANEMWERLLREETVF 254
AK + L F +M E P N I+D +L KA E+++ R V
Sbjct: 131 EAKLPE--KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS-RLHGVM 187
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
PN SYN++++ S + +++ +M + + DV +Y LI G + G ++GA +
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFE 373
DM+ + PD ++ GLC G +E + EEM G S + N +KG
Sbjct: 248 LDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS 303
Query: 374 NGKVEEAMNIWELLL--GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA--EHRGGD 429
GKVEEA ++ E+++ GET + S T+ ++I +C K LE+A E GD
Sbjct: 304 FGKVEEACDVVEVVMKNGET---LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Query: 430 VDVFAYSSMINALCKERRLDDAAG 453
+ + N E DDAA
Sbjct: 361 TRIVDV-GIENKKMPEIEQDDAAA 383
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKW-GKVEESFEL 349
++FTY LI ++ + + M+ +P N +L+ L G ++++FEL
Sbjct: 120 EIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 350 WEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC 408
++ G N SYN+ ++ N + A ++ +L E + D +Y ILI G C
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGFC 236
Query: 409 KNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTH 468
+ G +N A+++L++ ++G D ++I LC + D+ + M +G +
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 292
Query: 469 VCNPLIDGF 477
V N L+ GF
Sbjct: 293 VSNCLVKGF 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV 361
+S G L A ++K V P+ + N ++ C + +++L+ G+ R+V
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF---GKMLERDV 221
Query: 362 I----SYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
+ SY I I+G G+V AM + + +L + D T LI GLC G ++
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK-GFVPDRT----LIGGLCDQGMFDEGK 276
Query: 418 QVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT---HVCNPLI 474
+ LEE +G + ++ C ++++A VV ++ K G L++ + PLI
Sbjct: 277 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLI 336
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 176/374 (47%), Gaps = 45/374 (12%)
Query: 129 SEQWERAEKFFAYFD-TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG-------- 179
S W++A +FF + + +G ET+N +I +L K EFE + L+ M G
Sbjct: 58 SNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNH 117
Query: 180 VGLRPDKFSYGTL------INAAAKRGDLNAALE-----VFDEMSERG--VEPDVMCY-- 224
V R Y T I+A K D N E + D + E VE + +C+
Sbjct: 118 VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGK 177
Query: 225 ---------------NMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
N+I+ G+ K G + K E W+++ E V ++ SY++ + + +
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKM-DTEGVTKDLFSYSIYMDIMCK 236
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
G+ +++++++ MK K DV Y+++I + ++ RV+++M R P+V T
Sbjct: 237 SGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT 296
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLL 388
N ++ LC+ G++ +++ + +EM + G + + I+Y L K E ++++ ++
Sbjct: 297 HNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMI 353
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
+ + TY +L+ + G+L L V + + G D AY+++I+AL ++ L
Sbjct: 354 -RSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 412
Query: 449 DDAAGVVSLMDKRG 462
D A M +RG
Sbjct: 413 DMAREYEEEMIERG 426
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 154/376 (40%), Gaps = 53/376 (14%)
Query: 24 HSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVP 83
AL+ F R G+ H++ V+ L + I + +E VP
Sbjct: 62 QKALEFFNWVERESGFRHTTETFNRVI------DILGKYFEFEISWALINRMIGNTESVP 115
Query: 84 -----LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFN------------------ 120
+ K Y + EA++ + K+D F R +N
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDD-FNLRDETSFYNLVDALCEHKHVVEAEELC 174
Query: 121 ----SLLNAFAVSEQ---------------WERAEKFFAYFDTAGVSPNVETYNVLIKVL 161
+ N F+VS W + ++++ DT GV+ ++ +Y++ + ++
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 162 CKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDV 221
CK + KA L + M ++ D +Y T+I A + + VF EM ERG EP+V
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 222 MCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+N II + G A M + + + P+ ++Y + SR + SE L ++
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPK-RGCQPDSITYMCL---FSRLEKPSEILSLFG 350
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
RM ++ + + TY L+ + G L V+K M +PD NA+++ L + G
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 342 KVEESFELWEEMGQSG 357
++ + E EEM + G
Sbjct: 411 MLDMAREYEEEMIERG 426
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L+ ++K + ++KMD G + S++ ++ S + +A K + +
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMD-TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSR 253
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+ +V YN +I+ + + E + R M G P+ ++ T+I + G + A
Sbjct: 254 RMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDA 313
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ DEM +RG +PD + Y + K + L ++ R++R V P + +Y +++R
Sbjct: 314 YRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIR-SGVRPKMDTYVMLMR 369
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
R G L +W+ MK++ D Y+++I L Q G LD A+ ++MI R +SP
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 143/295 (48%), Gaps = 13/295 (4%)
Query: 201 DLNAALEVFDEMS-ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
D ALE F+ + E G +N +ID K +F + + R++ PN V+
Sbjct: 60 DWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVT 119
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY--KD 317
+ ++ + E+++ ++++ + D ++ +L+ L + ++ A+ + K+
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKN 178
Query: 318 MIGRRVS-PDVVTCNAMLNGLCK---WGKVEESFELWEEMGQSG-SRNVISYNIFIKGLF 372
+IG S + N +L G K WGK +E W++M G ++++ SY+I++ +
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKE---YWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
++GK +A+ +++ + + +D Y +I + + + ++V E RG + +V
Sbjct: 236 KSGKPWKAVKLYKEMKSRR-MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 433 FAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLF 487
++++I LC++ R+ DA ++ M KRGC+ ++ L K S + LF
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF 349
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 22/251 (8%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNS-----LLNAFAVSEQWERAEKFF 139
T+LK K DEA + ++ +G G +S LL+A + RA
Sbjct: 118 TILKGLGKARRIDEAFQMLETIE--YGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLL 175
Query: 140 AYFDTAGV---SPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
A +D + +P+V YN+L+K + A LL M + L PD+ +Y TLI+A
Sbjct: 176 ARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHAC 235
Query: 197 AKRGDLNAALEVFDEMSERG-------VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLR 249
K GDL+AA++ F++M E+ ++PDV+ Y ++ GF + D L E++ +
Sbjct: 236 IKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKL 295
Query: 250 EETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF-----TYSSLIHGLSQ 304
E VF + ++ ++ + +CG S +L ++ + K ++V Y S++ +
Sbjct: 296 CENVFIDRTAFTAVVDAMLKCGSTSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAV 355
Query: 305 MGNLDGAQRVY 315
G+ + +Y
Sbjct: 356 QGDYGMVRNLY 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 50/279 (17%)
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFD--EMSERGVEPDV---MCYNMIIDGFFK 233
G+G+ D SY T++ K ++ A ++ + E P + + Y ++ D
Sbjct: 108 GIGV--DSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLL-DALIN 164
Query: 234 SGDFLKANEMWER--LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
+GD +AN + R +L + P+V+ YN++++G ++ + + M + + D
Sbjct: 165 AGDLRRANGLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPD 224
Query: 292 VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWE 351
TY++LIH + G+LD A + + DM E++ E ++
Sbjct: 225 RLTYNTLIHACIKCGDLDAAMKFFNDM------------------------KEKAEEYYD 260
Query: 352 EMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA----VDSTTYGILIHGL 407
+ Q +V++Y +KG G + +++ E+ L E L +D T + ++ +
Sbjct: 261 DFLQP---DVVTYTTLVKGF---GDATDLLSLQEIFL-EMKLCENVFIDRTAFTAVVDAM 313
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVF-----AYSSMINA 441
K G + AL V E R G +V Y SM+ A
Sbjct: 314 LKCGSTSGALCVFGEILKRSGANEVLRPKPHLYLSMMRA 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSP 325
L+R + + +E E KK + + +S++ GN+D A R++ +M +
Sbjct: 52 LTRRRQLGQIVEEVEAAKKRYGRLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGV 111
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWE--EMGQSGSRNVISYNI---FIKGLFENGKVEEA 380
D ++ +L GL K +++E+F++ E E G + +S ++ + L G + A
Sbjct: 112 DSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRA 171
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK-----ALQVLEEAEHRGGDVDVFAY 435
LL L +D T +LI+ L GY+N A+ +L+E + D Y
Sbjct: 172 NG---LLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTY 228
Query: 436 SSMINALCKERRLDDA 451
+++I+A K LD A
Sbjct: 229 NTLIHACIKCGDLDAA 244
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 170/348 (48%), Gaps = 18/348 (5%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSA-VLQHVLRRVASDPTLLPHA 63
P ++ + + L+ ++P AL +++ + + SS ++ ++R+A
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRF---- 83
Query: 64 PHIIGAIEAAQNCNC--SEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNS 121
I IE+ +N +E TL+++Y + SM D A+ +F +MD++ G V SFN+
Sbjct: 84 SDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKL-GTPRTVVSFNA 142
Query: 122 LLNAFAVSEQWERAEKFFAYFDTA--GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
LL A S+ +ER + F F ++P+ +Y +LIK C + EKA ++R M
Sbjct: 143 LLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEV 202
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNM-IIDGFFKSGDFL 238
G+ ++ T++ + K G ++ A ++ EM +G + D YN+ +++ +S + +
Sbjct: 203 KGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERV 262
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
K E+ E + + P+ VSYN ++ G SE+ +++E ++ + + T+ +L
Sbjct: 263 K--ELMEE-MSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTL 315
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
I L G D V+K PD TC + GL K ++E++
Sbjct: 316 IFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 156/361 (43%), Gaps = 12/361 (3%)
Query: 106 MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKV--LCK 163
+D PG + + + + ++A + SP Y + + V L K
Sbjct: 20 IDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAK 79
Query: 164 KREFEKAKGLLR-WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVM 222
+ F + L+ + ++ + F TLI + + + A+++F+EM + G V+
Sbjct: 80 SQRFSDIEALIESHKNNPKIKTETF-LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVV 138
Query: 223 CYNMIIDGFFKSGDFLKANEMWERL-LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWE 281
+N ++ S F + ++++ R + P+ +SY ++I+ G+ +++EI
Sbjct: 139 SFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMR 198
Query: 282 RMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG 341
M+ + + +++++ L + G +D A+ ++ +M+ + D N L K
Sbjct: 199 DMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKES 258
Query: 342 KVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
E EL EEM G + + +SYN + G + EA ++E L A T+
Sbjct: 259 P-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNA-----ATF 312
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
LI LC NG ++ L V +++ D + L K R++DA GV ++ K
Sbjct: 313 RTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKK 372
Query: 461 R 461
+
Sbjct: 373 K 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 344 EESFELWEEMGQSGS-RNVISYNIFIKGLFENGKVEEAMNIW-ELLLGETALAVDSTTYG 401
+ + +++EEM + G+ R V+S+N + + E ++ E + D +YG
Sbjct: 119 DHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYG 178
Query: 402 ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
+LI C +G KA++++ + E +G +V + A+++++ +L K +D+A + M +
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 462 GCKLNTHVCN 471
GC L+ V N
Sbjct: 239 GCDLDNTVYN 248
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 168/344 (48%), Gaps = 18/344 (5%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N+ + ++ E + A K F + ++ T+N +I + + + A + + M
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLE----EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
+G++PD+F++G+L+ A DL+ V + + G+ + N +I + K+G K
Sbjct: 383 IGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK--HDVFTYSS 297
A+ ++ER LR+ N++S+N +I G G E LE + + ++E + D +T S+
Sbjct: 440 ADLLFERSLRK-----NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
L+ +L + + ++ + + NA++N + G ++ S E++ +M +
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE-- 552
Query: 358 SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
++V+S+N I +G+ E A+N ++ + E + D+ T+ ++ G + + L
Sbjct: 553 -KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 418 QVLEE-AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDK 460
++ E G +V +S +++ L + LD+A +V + +K
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEK 655
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 80/311 (25%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ +Y + + A++++++M + G +P +F SLL A S + E A
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIK 414
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKA---------KGLLRW---MSG------------- 179
G+S +E N LI K + EKA K L+ W +SG
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 180 --------VGLRPDKFSYGTL-----------------------------------INAA 196
V + PD ++ TL IN
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
++ G + +LEVF++MSE+ DV+ +N +I + + G+ A ++ + E V P+
Sbjct: 535 SQCGTIQNSLEVFNQMSEK----DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPD 590
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKK-NERKHDVFTYSSLIHGLSQMGNLDGAQ--- 312
+++ ++ S G E LEI+ M + + +V +S L+ L + G+LD A+
Sbjct: 591 AATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV 650
Query: 313 RVYKDMIGRRV 323
++ + IG RV
Sbjct: 651 KISEKTIGSRV 661
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
TL++ + G+L + + FDE+ E PDV + ++ FK GD A E+++++
Sbjct: 97 TLLSLYERLGNLASLKKKFDEIDE----PDVYSWTTLLSASFKLGDIEYAFEVFDKMPER 152
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
+ +V +N MI G G S+E++ M K +HD F +++++ + G+LD
Sbjct: 153 D----DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDF 207
Query: 311 AQRVYKDMI--GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFI 368
++V+ +I G ++ VV NA++ V ++ ++EE R+ +++N+ I
Sbjct: 208 GKQVHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEET-DVAVRDQVTFNVVI 264
Query: 369 KGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL-----------IHGLC-KNGY 412
GL K +E++ ++ +L + D T ++ +HGL K GY
Sbjct: 265 DGL-AGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGY 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 173/413 (41%), Gaps = 47/413 (11%)
Query: 78 CSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
C V TLL Y + F ++D P V S+ +LL+A S + E
Sbjct: 90 CHSHVSNTLLSLYERLGNLASLKKKFDEIDE-----PDVYSWTTLLSA---SFKLGDIEY 141
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLCKKREF-EKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
F FD +V +N +I CK+ + E + L R M +G+R DKF + T++ +
Sbjct: 142 AFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFREMHKLGVRHDKFGFATIL-SM 199
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
G L+ +V + + G N +I +F + A ++E + +
Sbjct: 200 CDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE---ETDVAVRD 256
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLS--QMGNLDGAQRV 314
V++NV+I GL+ R ESL ++ +M + + T+ S++ S MG+ +V
Sbjct: 257 QVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGH-----QV 310
Query: 315 YKDMIGRRVSPDVVTCNA---MLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGL 371
+ I + NA M + +G + FE EE ++++++N I
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE------KDLVTWNTMISSY 364
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE----HRG 427
+ + AM++++ + + D T+G L+ + L VLE + G
Sbjct: 365 NQAKLGKSAMSVYK-RMHIIGVKPDEFTFGSLLA-------TSLDLDVLEMVQACIIKFG 416
Query: 428 GDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ +++I+A K +++ A L+ +R + N N +I GF N
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKA----DLLFERSLRKNLISWNAIISGFYHN 465
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 181/374 (48%), Gaps = 28/374 (7%)
Query: 99 ALNLFRKMD---RVFGC--RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVET 153
AL+L R+ + RVF P V NSL+ A A + Q +A F+ G+ + T
Sbjct: 60 ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 154 YNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA--ALEVFDE 211
Y L+K + K + + +GL D + LI+ ++ G L A+++F++
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 212 MSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCG 271
MSER D + +N ++ G K+G+ A +++ + + + ++S+N M+ G +RC
Sbjct: 180 MSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRD-----LISWNTMLDGYARCR 230
Query: 272 RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCN 331
S++ E++E+M + + ++S+++ G S+ G+++ A+ ++ M + +VVT
Sbjct: 231 EMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKM--PLPAKNVVTWT 284
Query: 332 AMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
++ G + G ++E+ L ++M SG + + + + E+G + M I +L
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-ILKR 343
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
+ L ++ L+ K G L KA V + + D+ ++++M++ L +
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKE 399
Query: 451 AAGVVSLMDKRGCK 464
A + S M + G +
Sbjct: 400 AIELFSRMRREGIR 413
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+L YA+ +A LF KM R V S+++++ ++ + E A F
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPE----RNTV-SWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ NV T+ ++I +K ++A L+ M GL+ D + +++ A + G L+
Sbjct: 276 P--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL 333
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
+ + + + + N ++D + K G+ KA +++ + +++ +VS+N M+
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD-----LVSWNTML 388
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLD-GAQRVYKDMIGRRV 323
GL G E++E++ RM++ + D T+ +++ + G +D G Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
P V +++ L + G+++E+ ++ + M
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 195/426 (45%), Gaps = 40/426 (9%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
L L +AYA +L LF + P + F + +N +++ ++A +
Sbjct: 68 LKLHRAYASHGKIRHSLALFHQT-----IDPDLFLFTAAINTASINGLKDQAFLLYVQLL 122
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
++ ++PN T++ L+K K +L++ GL D + L++ AK GD+
Sbjct: 123 SSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKF----GLGIDPYVATGLVDVYAKGGDVV 178
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+A +VFD M ER ++ +I + K G+ A +++ + + +VS+NVM
Sbjct: 179 SAQKVFDRMPER----SLVSSTAMITCYAKQGNVEAARALFDSMCERD-----IVSWNVM 229
Query: 264 IRGLSRCGRFSESLEIWER-MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
I G ++ G +++L ++++ + + + K D T + + SQ+G L+ + ++ + R
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR 289
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMN 382
+ +V C +++ K G +EE+ ++ + + ++++++N I G +G ++A+
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFND---TPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE-AEHRGGDVDVFAYSSMINA 441
++ + G T L T+ + G +N+ +++ E + G + Y +++
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 442 LCKERRLDDAAGVVSLMDKRG-----------CKLN------THVCNPLIDGFIKNSNLT 484
L + +L A + M+ CKL+ + LI IKNS +
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 485 LLFKSL 490
+L ++
Sbjct: 467 VLLSNI 472
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 13/350 (3%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAG-VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
L S++W + + F + P+ Y+ LI V+ KK + A L M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALE----VFDEMSERGVE---PDVMCYNMIIDGFFK 233
G RPD Y LI A D ALE D+M +G+E P+V+ YN+++ F +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQ 220
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
SG + N +++ L V P+V ++N ++ + G E + RM+ NE K D+
Sbjct: 221 SGKVDQVNALFKD-LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
T++ LI + + ++ +K ++ + P + T N+M+ K ++++ ++++M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 354 GQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ I+Y I G V A I+E +GE+ + ++T ++ C+NG
Sbjct: 340 NDMNYIPSFITYECMIMMYGYCGSVSRAREIFE-EVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+A ++ A D Y + A K + ++ M+K G
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 132/290 (45%), Gaps = 7/290 (2%)
Query: 74 QNCNCSEDVPL--TLLKAYAKRSMPDEALNLFR----KMDRVFGCRPGVRSFNSLLNAFA 127
+N C D + L+ A+ +AL R KM + C+P V ++N LL AFA
Sbjct: 160 KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFA 219
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
S + ++ F D + VSP+V T+N ++ K ++ + +L M +PD
Sbjct: 220 QSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
++ LI++ K+ + + F + +P + +N +I + K+ KA ++++
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK- 338
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+ + P+ ++Y MI CG S + EI+E + +++R T ++++ + G
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
A +++ + RV PD T + K E+ L ++M + G
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 138/295 (46%), Gaps = 15/295 (5%)
Query: 156 VLIKVLCKKREFEKAKGLLRWMSGVGLR-PDKFSYGTLINAAAKRGDLNAALEVFDEMSE 214
+L + L K ++ + + RWM PD Y LI+ K+G A+ +F EM
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 215 RGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE----ETVFPNVVSYNVMIRGLSRC 270
G PD YN +I + D KA E L + E PNVV+YN+++R ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
G+ + +++ + + DV+T++ ++ + G + + V M PD++T
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKGLFENGKVEEAMNIWELLLG 389
N +++ K + E+ + ++ + +S + + ++N I + +++A +++ +
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK-KMN 340
Query: 390 ETALAVDSTTYG--ILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+ TY I+++G C G +++A ++ EE G+ D +S +NA+
Sbjct: 341 DMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEV----GESDRVLKASTLNAM 389
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 154/330 (46%), Gaps = 16/330 (4%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVG 181
+++ +A + +A + F D +P E + L+ LC+ EKA+ + ++
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 182 LRP-DKFSYGTLINAAAK-RGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
L P D + ++N D+ A ++ EM + P+ Y+ +I F K G+
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
+ +++ +++ + P + YN ++ L+R F E++++ +++ + K D TY+S+I
Sbjct: 313 SLRLYDE-MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
L + G LD A+ V MI +SP V T +A L + E++ E+ +M S
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLG 427
Query: 360 NVISYNIFIKG-LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
+ I G LF+ + E A+ IW + + + Y I GL G+L KA +
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKIWA-EMDRFEIVANPALYLATIQGLLSCGWLEKARE 486
Query: 419 VLEEAEHRGGDVDVFAYSSMINALCKERRL 448
+ E + +G F + M+ L +E+++
Sbjct: 487 IYSEMKSKG-----FVGNPMLQKLLEEQKV 511
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
EA ++R+M + P S++ +++ F+ + + + G++P +E YN L
Sbjct: 277 EAKRIWREMGN-YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSL 335
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
+ VL ++ F++A L++ ++ GL+PD +Y ++I + G L+ A V M +
Sbjct: 336 VYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
P V ++ F ++ +F K E+ + ++ + P ++ +++ L + + +L
Sbjct: 396 SPTVDTFH----AFLEAVNFEKTLEVLGQ-MKISDLGPTEETFLLILGKLFKGKQPENAL 450
Query: 278 EIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
+IW M + E + Y + I GL G L+ A+ +Y +M
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP-DVVTCNA 332
S+++ ++ M K + + L+ L + G+++ A+ + +++ P DV N
Sbjct: 206 SQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNV 263
Query: 333 MLNGLCK-WGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGE 390
+LNG C W V E+ +W EMG + N SY+ I + G + +++ +++ + +
Sbjct: 264 ILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM-KK 322
Query: 391 TALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDD 450
LA Y L++ L + ++A++++++ G D Y+SMI LC+ +LD
Sbjct: 323 RGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 451 AAGVVSLM 458
A V++ M
Sbjct: 383 ARNVLATM 390
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 13/350 (3%)
Query: 122 LLNAFAVSEQWERAEKFFAYFDTAG-VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
L S++W + + F + P+ Y+ LI V+ KK + A L M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALE----VFDEMSERGVE---PDVMCYNMIIDGFFK 233
G RPD Y LI A D ALE D+M +G+E P+V+ YN+++ F +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQ 220
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
SG + N +++ L V P+V ++N ++ + G E + RM+ NE K D+
Sbjct: 221 SGKVDQVNALFKD-LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
T++ LI + + ++ +K ++ + P + T N+M+ K ++++ ++++M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 354 GQSGS-RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
+ I+Y I G V A I+E +GE+ + ++T ++ C+NG
Sbjct: 340 NDMNYIPSFITYECMIMMYGYCGSVSRAREIFE-EVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRG 462
+A ++ A D Y + A K + ++ M+K G
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 132/290 (45%), Gaps = 7/290 (2%)
Query: 74 QNCNCSEDVPL--TLLKAYAKRSMPDEALNLFR----KMDRVFGCRPGVRSFNSLLNAFA 127
+N C D + L+ A+ +AL R KM + C+P V ++N LL AFA
Sbjct: 160 KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFA 219
Query: 128 VSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKF 187
S + ++ F D + VSP+V T+N ++ K ++ + +L M +PD
Sbjct: 220 QSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
++ LI++ K+ + + F + +P + +N +I + K+ KA ++++
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK- 338
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGN 307
+ + P+ ++Y MI CG S + EI+E + +++R T ++++ + G
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 308 LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
A +++ + RV PD T + K E+ L ++M + G
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 10/348 (2%)
Query: 82 VPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY 141
+ L +L + K S +A + ++ R C+P ++ + AF V+ +
Sbjct: 225 IALLILHSLCKCSREMDAFYILEEL-RNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKK 283
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
GV+P Y I L + +AK + + D LI + + D
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSA-VD 342
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFF---KSGDFLKANEMWERLLREETVFPNVV 258
++A+E M G P + + + KS +KA E LL + F +
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYE----LLSSKGYFSELQ 398
Query: 259 SYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
SY++MI L + GR ES + MKK DV Y++LI + + A++++ +M
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 319 IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKV 377
++ T N ++ L + G+ EES L+++M + G + Y I+GL + K+
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
E AM ++ + V + LC NG+ +A Q+L E EH
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREH 566
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 189/481 (39%), Gaps = 64/481 (13%)
Query: 22 NPHS-ALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSE 80
N HS AL F A + PGY+H S + + ++ A++A S
Sbjct: 60 NHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQF--------SAMDALFKQVKSN 111
Query: 81 DVPLTLLKAYAKRSMPDEALNLFRKMDRVF-----------GCRPGVRSFNSLLNAFAVS 129
+ LL + RS+ D L L RK F P V N LL
Sbjct: 112 KI---LLDSSVYRSLID-TLVLGRKAQSAFWVLEEAFSTGQEIHPDV--CNRLLAGLTSD 165
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
++ A+K F GVS N + V I C+ E + L+ + L +
Sbjct: 166 GCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSII 225
Query: 190 GTLI-NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
LI ++ K A + +E+ +PD M Y +I + F +G+ + + ++
Sbjct: 226 ALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKK- 284
Query: 249 REETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD----------------- 291
R+ V P Y I L R +E+ E+ E + + D
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 292 -----------------VFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAML 334
+ T S L L + D + Y+ + + ++ + + M+
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 335 NGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETAL 393
+ LCK G+V ES+ +EM + G + +V YN I+ + + A +W+ + E
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE-GC 463
Query: 394 AVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAG 453
++ TTY +LI L + G ++L++ ++ RG + D Y S+I LCKE +++ A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 454 V 454
V
Sbjct: 524 V 524
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 199/434 (45%), Gaps = 45/434 (10%)
Query: 26 ALQ--LFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVP 83
ALQ L + A Y H ++QH R L HA ++ +I+ N S+
Sbjct: 10 ALQGLLNKAAVDGGAYGH---LIQHFTRHRLPLHVLQLHARIVVFSIKP-DNFLASK--- 62
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF---- 139
L+ Y ++ +AL++F ++ S+N+LL A+ E + A F
Sbjct: 63 --LISFYTRQDRFRQALHVFDEI-----TVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 140 --AYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV----GLRPDKFSYGTLI 193
+ + + P+ + + ++K L +F L R + G G D F +I
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGS-LARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 194 NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
K ++ +A +VFDEMSER DV+ +N +I G+ +SG F +M++ +L
Sbjct: 175 TYYTKCDNIESARKVFDEMSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 254 FPNVVSYNVMIRGLSRCGRFSE---SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG 310
PN V+ +I CG+ S+ LE+ ++M +N + D+ +++I ++ G+LD
Sbjct: 231 KPNGVT---VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 311 AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKG 370
A+ ++ +M + D VT A+++G G V+E+ L+ EM G + ++N I G
Sbjct: 288 ARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIG---LSTWNAMISG 340
Query: 371 LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDV 430
L +N EE +N + ++ ++ T L+ L + L ++ A G D
Sbjct: 341 LMQNNHHEEVINSFREMI-RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 431 DVFAYSSMINALCK 444
+++ +S+I+ K
Sbjct: 400 NIYVTTSIIDNYAK 413
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNV----- 151
+E +N FR+M R G RP + +SLL + S + ++ A+ G N+
Sbjct: 348 EEVINSFREMIRC-GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTS 406
Query: 152 --ETYNVLIKVLCKKREFE--KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
+ Y L +L +R F+ K + L+ W + +I A A GD ++A
Sbjct: 407 IIDNYAKLGFLLGAQRVFDNCKDRSLIAWTA-------------IITAYAVHGDSDSACS 453
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+FD+M G +PD + ++ F SGD A +++ +L + + P V Y M+ L
Sbjct: 454 LFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVL 513
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
SR G+ S+++E +M + + +L++G S +G+L+ A+
Sbjct: 514 SRAGKLSDAMEFISKMPIDPIAK---VWGALLNGASVLGDLEIAR 555
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/373 (18%), Positives = 142/373 (38%), Gaps = 87/373 (23%)
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
++PD F LI+ ++ AL VFDE++ R + YN ++ + + A
Sbjct: 53 IKPDNFLASKLISFYTRQDRFRQALHVFDEITVR----NAFSYNALLIAYTSREMYFDAF 108
Query: 242 EMW-----ERLLREETVFPNVVSYNVMIRGLSRCGRF----------------------- 273
++ + P+ +S + +++ LS C F
Sbjct: 109 SLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVF 168
Query: 274 -----------SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY------- 315
+++E ++ + DV +++S+I G SQ G+ + +++Y
Sbjct: 169 VGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 316 -----------------------------KDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
K MI + D+ CNA++ K G ++ +
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 347 FELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
L++EM + ++ ++Y I G +G V+EAM ++ + ++ +T+ +I G
Sbjct: 289 RALFDEMSE---KDSVTYGAIISGYMAHGLVKEAMALFSEM-----ESIGLSTWNAMISG 340
Query: 407 LCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
L +N + + + E G + SS++ +L L + + + G N
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 467 THVCNPLIDGFIK 479
+V +ID + K
Sbjct: 401 IYVTTSIIDNYAK 413
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 116/265 (43%), Gaps = 15/265 (5%)
Query: 90 YAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSP 149
YAK D A LF +M + V ++ ++++ + + A F+ ++ G+S
Sbjct: 279 YAKCGSLDYARALFDEMSE----KDSV-TYGAIISGYMAHGLVKEAMALFSEMESIGLS- 332
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
T+N +I L + E+ R M G RP+ + +L+ + +L E+
Sbjct: 333 ---TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
G + ++ IID + K G L A +++ +++++ +I +
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR-----SLIAWTAIITAYAV 444
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVV 328
G + ++++M+ K D T ++++ + G+ D AQ ++ M+ + + P V
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 329 TCNAMLNGLCKWGKVEESFELWEEM 353
M++ L + GK+ ++ E +M
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKM 529
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
+++RE + + YN++I GL + G+F E+ I+ + + + DV TY+ +I +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RF 58
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYN 365
+L A+++Y +MI R + PD +T N+M++GLCK K+ ++ ++ S++ ++N
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFN 110
Query: 366 IFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEH 425
I G + +V++ MN++ + + + TY LIHG + G N AL + +E
Sbjct: 111 TLINGYCKATRVKDGMNLF-CEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 426 RGGDVDVFAYSSMINALCKERRLDDAAGVV 455
G + ++ LC + L A ++
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+F M E ++ D YN+II G K+G F +A ++ LL + P+V +YN+MIR
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLL-ISGLQPDVQTYNMMIR-F 58
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
S GR + +++ M + D TY+S+IHGL + L A R+VS
Sbjct: 59 SSLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSC 106
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWEL 386
T N ++NG CK +V++ L+ EM + G NVI+Y I G + G A++I++
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
++ + S T+ ++ LC L KA+ +L
Sbjct: 167 MVSNGVYS-SSITFRDILPQLCSRKELRKAVAML 199
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 21/219 (9%)
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
DTAG YN++I LCK +F++A + + GL+PD +Y +I ++ L
Sbjct: 13 DTAG-------YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS----L 61
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
A +++ EM RG+ PD + YN +I G K +L + V + ++N
Sbjct: 62 GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQ----------NKLAQARKVSKSCSTFNT 111
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
+I G + R + + ++ M + +V TY++LIHG Q+G+ + A ++++M+
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNV 361
V +T +L LC ++ ++ + + S NV
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 14/152 (9%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
DEA N+F + + G +P V+++N ++ ++ RAEK +A G+ P+ TYN
Sbjct: 31 DEAGNIFTNL-LISGLQPDVQTYNMMIRFSSLG----RAEKLYAEMIRRGLVPDTITYNS 85
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+I LCK+ + +A+ + + S ++ TLIN K + + +F EM RG
Sbjct: 86 MIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKATRVKDGMNLFCEMYRRG 136
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLL 248
+ +V+ Y +I GF + GDF A ++++ ++
Sbjct: 137 IVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
+++ M+++ D Y+ +IHGL + G D A ++ +++ + PDV T N M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 339 KWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDS 397
++ + + +L+ EM + G + I+YN I GL + K+ +A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK----------SC 106
Query: 398 TTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINAL 442
+T+ LI+G CK + + + E RG +V Y+++I+
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 314 VYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLF 372
++K M + D N +++GLCK GK +E+ ++ + SG + +V +YN+ I+ F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--F 58
Query: 373 EN-GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ G+ E+ ++ ++ L D+ TY +IHGLCK L +A +V +
Sbjct: 59 SSLGRAEK---LYAEMI-RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS------- 107
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
++++IN CK R+ D + M +RG N LI GF
Sbjct: 108 --TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 176/377 (46%), Gaps = 15/377 (3%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
LL AYA++ +E + + +M+ G + S+N +L+ F S + A F
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESS-GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G P+ T + ++ + + + ++ GL DK +I+ K G +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 205 ALEVFD--EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNV 262
+ +F+ EM E GV C N I G ++G KA EM+E L +E+T+ NVVS+
Sbjct: 306 IISLFNQFEMMEAGV-----C-NAYITGLSRNGLVDKALEMFE-LFKEQTMELNVVSWTS 358
Query: 263 MIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
+I G ++ G+ E+LE++ M+ K + T S++ + L + + +
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMN 382
+ +V +A+++ K G++ S ++ M ++N++ +N + G +GK +E M+
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMM---PTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 383 IWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE-EAEHRGGDVDVFAYSSMINA 441
I+E L+ T L D ++ L+ + G ++ + + +E G + YS M+N
Sbjct: 476 IFESLM-RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 442 LCKERRLDDAAGVVSLM 458
L + +L +A ++ M
Sbjct: 535 LGRAGKLQEAYDLIKEM 551
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 177/455 (38%), Gaps = 109/455 (23%)
Query: 70 IEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVS 129
I + N NC D L L +S+PD P + SF+SL+ A +
Sbjct: 57 IASYSNYNCFNDADLVL------QSIPD----------------PTIYSFSSLIYALTKA 94
Query: 130 EQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSY 189
+ + ++ F+ + G+ P+ L KV + F+ K + GL D F
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 190 GTLINAAAKRGDLNAALEVFDEMSER-------------------------------GVE 218
G++ + + G + A +VFD MS++ G+E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
+++ +N I+ GF +SG +A M+++ I L C
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQK-----------------IHHLGFCP------- 250
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
D T SS++ + L+ + ++ +I + + D +AM++
Sbjct: 251 ------------DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 339 KWGKVEESFELWE--EMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K G V L+ EM ++G N +I GL NG V++A+ ++E L E + ++
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNA-----YITGLSRNGLVDKALEMFE-LFKEQTMELN 352
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSM------INALCKERRLDD 450
++ +I G +NG +AL++ E + G + SM I AL R
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 451 AAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
A V L+D N HV + LID + K + L
Sbjct: 413 FAVRVHLLD------NVHVGSALIDMYAKCGRINL 441
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 161/364 (44%), Gaps = 45/364 (12%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
N+ ++ FA E A K F D + V ++ ++N LI K E EKA + + M
Sbjct: 195 NASIHMFASCGDMENARKVF---DESPVR-DLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
G++PD + L+++ + GDLN E ++ + E G+ + N ++D F K GD +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCG---------------------------- 271
A +++ L + +VS+ MI G +RCG
Sbjct: 311 ARRIFDNLEKR-----TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 272 ---RFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
R ++L +++ M+ + K D T + SQ+G LD +++ + +S +V
Sbjct: 366 QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVA 425
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
++++ K G + E+ ++ + +RN ++Y I GL +G A++ + ++
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGI---QTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGG-DVDVFAYSSMINALCKERR 447
+ +A D T+ L+ C G + + + R + + YS M++ L +
Sbjct: 483 -DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 448 LDDA 451
L++A
Sbjct: 542 LEEA 545
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKN---ERKHDVFTYSSLIHGLSQMGNLDGA 311
PN+ S+NV IRG S ES ++++M ++ E + D FTY L + +
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGL 371
+ ++ R+ NA ++ G +E + ++++E S R+++S+N I G
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE---SPVRDLVSWNCLINGY 232
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+ G+ E+A+ +++L+ E D T G L+ G LN+ + E + G +
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIG-LVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKR 461
+ +++++ K + +A + ++KR
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 111/262 (42%), Gaps = 18/262 (6%)
Query: 91 AKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPN 150
AKR +AL LF++M + +P + L+A + + Y + +S N
Sbjct: 367 AKRG--QDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 151 VETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFD 210
V L+ + K +A L G+ R + +Y +I A GD + A+ F+
Sbjct: 424 VALGTSLVDMYAKCGNISEA---LSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFN 479
Query: 211 EMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRC 270
EM + G+ PD + + ++ G + + ++ + P + Y++M+ L R
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 271 GRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
G E+ + E M + D + +L+ G GN++ ++ K ++ + P
Sbjct: 540 GLLEEADRLMESMPM---EADAAVWGALLFGCRMHGNVELGEKAAKKLL--ELDPSDSGI 594
Query: 331 NAMLNGLCKWGKVEESFELWEE 352
+L+G+ +G+ +WE+
Sbjct: 595 YVLLDGM--YGEA----NMWED 610
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 141 YFDTAGV--------SPNVETYNVLIKVLCKKREF-----------EKAKGLLRWMSGVG 181
YFD A PN+ ++ + +LCK +F + K + R GV
Sbjct: 118 YFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGV- 176
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
D+F+ L+ A ++ A +F+++ R PDV N+++ GF ++GD + A
Sbjct: 177 ---DEFN--ILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGD-VTAT 229
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
E++ + + PN V+Y + I G + F E+L ++E M + + V ++LIHG
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG 289
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG--SR 359
N A++++ ++ R ++PD NA+++ L K G V + ++ +EM + G
Sbjct: 290 SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Query: 360 NVISYNIFI-----KGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+V +++FI K NG E + + E +L + T +L+ C NG +N
Sbjct: 350 SVTFHSMFIGMMKSKEFGFNGVCE-----YYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDA 451
L + + +G A + ALC RR +DA
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
LL+A+ EA ++F K+ F P V++ N LL F + E F+
Sbjct: 182 LLRAFCTEREMKEARSIFEKLHSRFN--PDVKTMNILLLGFKEAGDVTATELFYHEMVKR 239
Query: 146 GVSPNVETYNVLIKVLCKKREFE-----------------------------------KA 170
G PN TY + I CKKR F KA
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ L +S GL PD +Y L+++ K GD++ A++V EM E+G+EPD + ++ + G
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 231 FFKSGDF-LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM 283
KS +F + + ++E ++ P + ++++ G + L++W+ M
Sbjct: 360 MMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 41/249 (16%)
Query: 241 NEMWERLLREETVFPNVVSY---NVMIRGLSRCGRFSESLEIWERMKKN--ERKHDVFTY 295
++ W + +PN++S+ ++++ +++ G + E+LE + +M+K +K V +
Sbjct: 120 DQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEF 179
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ L+ + A+ +++ + R +PDV T N +L G + G V + + EM +
Sbjct: 180 NILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVK 238
Query: 356 SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNK 415
G + +S TYGI I G CK +
Sbjct: 239 RGFKP-----------------------------------NSVTYGIRIDGFCKKRNFGE 263
Query: 416 ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
AL++ E+ + D+ V +++I+ R A + + KRG + N L+
Sbjct: 264 ALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMS 323
Query: 476 GFIKNSNLT 484
+K +++
Sbjct: 324 SLMKCGDVS 332
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 21/365 (5%)
Query: 60 LPHAPHIIGAIEAAQNCNCSED-VPLTLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVR 117
L A H IG + C ED TLL Y+K D A +FR+M DR V
Sbjct: 314 LGRAVHSIGV----KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR------SVV 363
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
S+ S++ +A A K F + G+SP+V T ++ + R ++ K + W+
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
L D F L++ AK G + A VF EM + D++ +N II G+ K+
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNCYA 479
Query: 238 LKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSS 297
+A ++ LL E+ P+ + ++ + F + EI + +N D +S
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 298 LIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
L+ ++ G L A ++ D+ S D+V+ M+ G G +E+ L+ +M Q+G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDI----ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 358 -SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKA 416
+ IS+ + +G V+E + ++ E + Y ++ L + G L KA
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 417 LQVLE 421
+ +E
Sbjct: 656 YRFIE 660
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 153/351 (43%), Gaps = 74/351 (21%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ Y K D A +F +M V S+NS++N + + E+ F
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTE-----RDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGL-----RPDKFSYGTLINAAAKR 199
+G+ ++ T + R L R + +G+ R D+F TL++ +K
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLIS----LGRAVHSIGVKACFSREDRFC-NTLLDMYSKC 344
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
GDL++A VF EMS+R +VVS
Sbjct: 345 GDLDSAKAVFREMSDR----------------------------------------SVVS 364
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
Y MI G +R G E+++++E M++ DV+T +++++ ++ LD +RV++ +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEE 379
+ D+ NA+++ K G ++E+ ++ EM +++IS+N I G +N E
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM---RVKDIISWNTIIGGYSKNCYANE 481
Query: 380 AMNIWELLLGETALAVDSTTYGIL---------------IHG-LCKNGYLN 414
A++++ LLL E + D T + IHG + +NGY +
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 168/407 (41%), Gaps = 57/407 (14%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N L+N A S + + F ++GV + T++ + K R + L ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
G +L+ K +++A +VFDEM+ER DV+ +N II+G+ +G
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAE 278
Query: 239 KANEMWERLLRE--ETVFPNVVSY--------------------------------NVMI 264
K ++ ++L E +VS N ++
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
S+CG + ++ M V +Y+S+I G ++ G A +++++M +S
Sbjct: 339 DMYSKCGDLDSAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFEN-----GKVEE 379
PDV T A+LN ++ ++E + E + + N + ++IF+ + G ++E
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKE----NDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE-EAEHRGGDVDVFAYSSM 438
A EL+ E + D ++ +I G KN Y N+AL + E + D + +
Sbjct: 451 A----ELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 439 INALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
+ A D + + + G + HV N L+D + K L L
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 552
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ GD +A+ +++ + E+ +F +N+++ L++ G FS S+ ++++M + +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALF-----WNILMNELAKSGDFSGSIGLFKKMMSSGVEM 193
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D +T+S + S + ++ G ++++ ++ N+++ K +V+ + +++
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY---------- 400
+EM + R+VIS+N I G NG E+ ++++ +L + + +D T
Sbjct: 254 DEMTE---RDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGCADS 309
Query: 401 -----GILIHGL--------------------CKNGYLNKALQVLEEAEHRGGDVDVFAY 435
G +H + K G L+ A V E R V +Y
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS----VVSY 365
Query: 436 SSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLID 475
+SMI +E +A + M++ G + + +++
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 173/403 (42%), Gaps = 40/403 (9%)
Query: 53 VASDPTLLPHAPHIIGAIEAAQNCNCSEDVPL--TLLKAYAKRSMPDEALNLFRKMDRVF 110
+ S T L + IG ++ + C D+ +LL YA + + +A+ + ++M ++
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIA 219
Query: 111 GCRPGVRSFNSLLNAFAVSEQWERAEKFFAY-------------------FDTAGVSP-- 149
G +P S +SLL A A + + Y + G P
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 150 ----------NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
N+ +N L+ L + A+ L+ M G++PD ++ +L + A
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 200 GDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVS 259
G AL+V +M E+GV P+V+ + I G K+G+F A +++ + ++EE V PN +
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK-MQEEGVGPNAAT 398
Query: 260 YNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMI 319
+ +++ L E+ + D + ++L+ + G+L A ++ +
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 320 GRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVE 378
+ ++ + N ML G +G+ EE + M ++G + I++ + +G V+
Sbjct: 459 NKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQ 514
Query: 379 EAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
E ++L+ + ++ L ++GYL++A ++
Sbjct: 515 EGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 145/334 (43%), Gaps = 34/334 (10%)
Query: 25 SALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSEDVPL 84
+ ++L Q + G+ + +VLR +G CN
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLR---------------LGLESNVSMCN------- 128
Query: 85 TLLKAYAKRSMPDEALNLFRKM-DRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFD 143
+L+ Y++ + + +F M DR + S+NS+L+++ + A +
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDR------NLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 144 TAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
G+ P++ T+N L+ K + A +L+ M GL+P S +L+ A A+ G L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+ + + DV +ID + K+G A R++ + N+V++N +
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA-----RMVFDMMDAKNIVAWNSL 297
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ GLS ++ + RM+K K D T++SL G + +G + A V M + V
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG 357
+P+VV+ A+ +G K G + +++ +M + G
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 150/369 (40%), Gaps = 52/369 (14%)
Query: 21 KNPHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPTLLPHAPHIIGAIEAAQNCNCSE 80
K+ + L+ Q A P + S++LQ V ++P L I G I Q
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAV-----AEPGHLKLGKAIHGYILRNQ-LWYDV 260
Query: 81 DVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFA 140
V TL+ Y K A +F MD + ++NSL++ + + + AE
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDA-----KNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 141 YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
+ G+ P+ T+N L + EKA ++ M G+ P+ S+ + + +K G
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 201 DLNAALEVFDEMSERGVEP-----------------------------------DVMCYN 225
+ AL+VF +M E GV P D
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
++D + KSGD A E++ + + ++ S+N M+ G + GR E + + M +
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNK-----SLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVVTCNAMLNGLCKWGKVE 344
+ D T++S++ G + + + M R + P + C+ M++ L + G ++
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 345 ESFELWEEM 353
E+++ + M
Sbjct: 551 EAWDFIQTM 559
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 165/360 (45%), Gaps = 15/360 (4%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
++N ++ S WE+A + F +G T L++V K F + + + ++
Sbjct: 56 AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYV 115
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDF 237
+GL + +LI ++ G L + +VF+ M +R + +N I+ + K G
Sbjct: 116 LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS----WNSILSSYTKLGYV 171
Query: 238 LKANEMWERLLREETVF---PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
A LL E + P++V++N ++ G + G +++ + +RM+ K +
Sbjct: 172 DDA----IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
SSL+ +++ G+L + ++ ++ ++ DV +++ K G + + +++ M
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM- 286
Query: 355 QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
++N++++N + GL +++A + + + + + D+ T+ L G G
Sbjct: 287 --DAKNIVAWNSLVSGLSYACLLKDAEAL-MIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 415 KALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLI 474
KAL V+ + + +G +V +++++ + K +A V M + G N + L+
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP-DVMCYNMIIDGFFKSGDFLKAN 241
+ D ++ ++ + G+ A+E+F EM G + D ++ K G F +
Sbjct: 51 KRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG-FAEGR 109
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
++ +LR + NV N +I SR G+ S +++ MK ++ +++S++
Sbjct: 110 QIHGYVLRL-GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD----RNLSSWNSILSS 164
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-N 360
+++G +D A + +M + PD+VT N++L+G G +++ + + M +G + +
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
S + ++ + E G ++ I +L L D LI K GYL A V
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYIL-RNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGF 477
+ + + ++ A++S+++ L L DA ++ M+K G K + N L G+
Sbjct: 284 DMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 168/375 (44%), Gaps = 61/375 (16%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
+L YA + +F ++D R +R +NS++++F + +A F+
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLR---RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF 132
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
GVSP+V T+ L+K + F+ L +S +G+ ++F +LI A + G ++
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN---- 261
++FD R ++ D + +N++++G+ K G + + ++R + + PN V+++
Sbjct: 193 SKLFD----RVLQKDCVIWNVMLNGYAKCGALDSVIKGFS-VMRMDQISPNAVTFDCVLS 247
Query: 262 -----------VMIRGL--------------------SRCGRFSESLEIWERMKKNERKH 290
V + GL S+CGRF ++ +++ M +
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RA 303
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
D T++ +I G Q G ++ + + +MI V PD +T +++L + K+ E+ E
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF----ENLEYC 359
Query: 351 EEMGQSGSRNVISYNIF-----IKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
+++ R+ IS +IF I F+ V A NI+ +VD + +I
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF-----SQCNSVDVVVFTAMIS 414
Query: 406 GLCKNGYLNKALQVL 420
G NG +L++
Sbjct: 415 GYLHNGLYIDSLEMF 429
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/445 (19%), Positives = 186/445 (41%), Gaps = 88/445 (19%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+LL Y+K D+A LFR M R ++N +++ + S E + FF +
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRA-----DTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+GV P+ T++ L+ + K E K + ++ + D F LI+A K ++
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY---- 260
A +F + + DV+ + +I G+ +G ++ + EM+ R L + + PN ++
Sbjct: 394 AQNIFSQCNS----VDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSIL 448
Query: 261 ----------------------------NV---MIRGLSRCGRFSESLEIWERMKKNERK 289
N+ +I ++CGR + + EI+ER+ K
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK---- 504
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDM------------------------------- 318
D+ +++S+I +Q N A +++ M
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 319 ----IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFEN 374
I ++ DV + + +++ K G ++ + +++ M + +N++S+N I +
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE---KNIVSWNSIIAACGNH 621
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEE-AEHRGGDVDVF 433
GK+++++ ++ ++ ++ + D T+ +I C G +++ ++ E G
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 434 AYSSMINALCKERRLDDAAGVVSLM 458
Y+ +++ + RL +A V M
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSM 706
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 14/274 (5%)
Query: 77 NCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE 136
+C+E V +L+KAY + D LF DRV + +N +LN +A +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLF---DRVL--QKDCVIWNVMLNGYAKCGALDSVI 224
Query: 137 KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAA 196
K F+ +SPN T++ ++ V K + L + G+ + +L++
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 197 AKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN 256
+K G + A ++F MS D + +N +I G+ +SG ++ + ++ V P+
Sbjct: 285 SKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPD 339
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
++++ ++ +S+ +I + ++ D+F S+LI + + AQ ++
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
S DVV AM++G G +S E++
Sbjct: 400 QC----NSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 81 DVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFA 140
++ ++ YAK + A +F ++ + + S+NS++ A S+ A F
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSK-----RDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 141 YFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRG 200
+G+ + + + + K + +M L D +S TLI+ AK G
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
+L AA+ VF M E+ +++ +N II G + ++ ++ + + P+ +++
Sbjct: 592 NLKAAMNVFKTMKEK----NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKN-----ERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
+I G E + + M ++ +++H Y+ ++ + G L A
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH----YACVVDLFGRAGRLTEAYETV 703
Query: 316 KDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
K M PD +L G C+ K E E+
Sbjct: 704 KSM---PFPPDAGVWGTLL-GACRLHKNVELAEV 733
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 154/380 (40%), Gaps = 45/380 (11%)
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM-SERG 216
++ L + + + A L R RP F+ +I A + + ++ +F +
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
+ P+V+ YN II+ G+ +A E++ +L P+ V+Y + +GL + GR ++
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDG-------------------------- 310
+ M + D Y++LI G +G+ D
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 311 ---------AQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM-GQSGSRN 360
A Y+ ++ ++ T N +L K+GK +E++ L+ EM N
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 361 VISYN-----IFIKGLFENGKVEEAMNIWELL---LGETALAVDSTTYGILIHGLCKNGY 412
++S N I + F+ G+ EA+N ++ + + +D Y ++ C+ G
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGM 451
Query: 413 LNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNP 472
L +A + E R D ++ +MI+A K R+DDA ++ M ++
Sbjct: 452 LTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGAR 511
Query: 473 LIDGFIKNSNLTLLFKSLGK 492
+ IKN LT + L K
Sbjct: 512 VFGELIKNGKLTESAEVLTK 531
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 159/370 (42%), Gaps = 46/370 (12%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY-FDTAGVSPNVETYNV 156
E+++LF+ + P V S+N ++NA + A + + + A +P+ TY
Sbjct: 198 ESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRH 257
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS--- 213
L K L + A LLR M G D Y LI GD + A+E FDE+
Sbjct: 258 LTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKC 317
Query: 214 ----------------ERGVEPDVM-CYNMIIDGFFK----SGDFL--------KANEMW 244
E+G + + M Y ++D F+ +G+ L K +E W
Sbjct: 318 TVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAW 377
Query: 245 ERL--LREETVFPNVVSYN-----VMIRGLSRCGRFSESLEIWERMKKNERKH----DVF 293
+ + PN++S N +M+ + G FSE++ ++++ D
Sbjct: 378 ALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYL 437
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
Y +++ + G L A+R + + + R + D + AM++ K +++++ ++ + M
Sbjct: 438 GYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Query: 354 GQSGSRNVISYNIFIKG-LFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
R V + + G L +NGK+ E+ + +GE D + Y +++ GLC
Sbjct: 498 VDVNLRVVADFGARVFGELIKNGKLTESAEVL-TKMGEREPKPDPSIYDVVVRGLCDGDA 556
Query: 413 LNKALQVLEE 422
L++A ++ E
Sbjct: 557 LDQAKDIVGE 566
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 154/389 (39%), Gaps = 54/389 (13%)
Query: 4 LPKPLSPHRLLNLLKSEKNPHSALQLFQHATRHPGYTHSSAVLQHVLR------RVASDP 57
+P +S ++++N E N AL++++H + + SS +H+ + R+
Sbjct: 213 VPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAA 272
Query: 58 TLLPHAPHIIGAIEAAQN-----------------------------CNCSED-VPLTLL 87
+LL ++ +AA + C + V T +
Sbjct: 273 SLL---REMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFM 329
Query: 88 KAYAKRSMPDEALNLFRK-MDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
+ + ++ EA+ +R +D+ F P + N LL F + + A F
Sbjct: 330 EYWFEKGNDKEAMESYRSLLDKKFRMHPP--TGNVLLEVFLKFGKKDEAWALFNEMLDNH 387
Query: 147 VSPNV-----ETYNVLIKVLCKKREFEKAKGLLRWM-SGVGLRP---DKFSYGTLINAAA 197
PN+ +T +++ K EF +A + + S V +P D Y ++
Sbjct: 388 APPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFC 447
Query: 198 KRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNV 257
++G L A F E R + D + +ID + K+ A +M +R++ + V
Sbjct: 448 EQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMV--DVNLRVV 505
Query: 258 VSYNVMIRG-LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK 316
+ + G L + G+ +ES E+ +M + E K D Y ++ GL LD A+ +
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565
Query: 317 DMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+MI V V ++ K G+ EE
Sbjct: 566 EMIRHNVGVTTVLREFIIEVFEKAGRREE 594
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 163/345 (47%), Gaps = 20/345 (5%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVE----TYNVLIKVLCKKREFEKAKGLL 174
+N+++ F+ S E A F D SP+V+ TY + K + + + L
Sbjct: 92 WNTIIRGFSRSSFPEMAISIF--IDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 175 RWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKS 234
+ GL D F T+++ G L A +F M + DV+ +N +I GF K
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKC 205
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFT 294
G +A +++ + + N VS+N MI G R GRF ++L+++ M++ + K D FT
Sbjct: 206 GLIDQAQNLFDEMPQR-----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 295 YSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG 354
SL++ + +G + + +++ ++ R + + A+++ CK G +EE ++E
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE--- 317
Query: 355 QSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN 414
+ + + +N I GL NG E AM+++ L + L DS ++ ++ +G ++
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFS-ELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 415 KALQVLE-EAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
+A + E + + Y+ M+N L L++A ++ M
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 15/267 (5%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + + +AL++FR+M +P + SLLNA A E+ Y
Sbjct: 228 SMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR 286
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
N LI + CK E+ + + + ++I A G
Sbjct: 287 NRFELNSIVVTALIDMYCKCGCIEEGLNVFE----CAPKKQLSCWNSMILGLANNGFEER 342
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF-PNVVSYNVM 263
A+++F E+ G+EPD + + ++ SG+ +A+E + RL++E+ + P++ Y +M
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLM 401
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ L G E+ + + M E D +SSL+ ++GN++ A+R K + +++
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEE---DTVIWSSLLSACRKIGNVEMAKRAAKCL--KKL 456
Query: 324 SPDVVTCNAML--NGLCKWGKVEESFE 348
PD TC +L N +G EE+ E
Sbjct: 457 DPD-ETCGYVLLSNAYASYGLFEEAVE 482
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 155 NVLIKVLCKKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMS 213
+++ +VL +KA W + + G + D F+Y T+++ + G + + VF M
Sbjct: 90 HIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMK 149
Query: 214 ERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRF 273
E+GV D + Y +I SGD A +WE + R+ P VVSY ++ L GR
Sbjct: 150 EKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM-RDNGCEPTVVSYTAYMKMLFADGRV 208
Query: 274 SESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
E+ E+++ M ++ + TY+ L+ L G + A ++ M V PD CN +
Sbjct: 209 EEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNIL 268
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGL 371
+ K+G+ + M ++G V+ Y IF++ L
Sbjct: 269 IAKALKFGETSFMTRVLVYMKENGV--VLRYPIFVEAL 304
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
KHD FTY++++ + G + V+ M + V D VT ++++ + G V+ +
Sbjct: 119 KHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMR 178
Query: 349 LWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGL 407
LWEEM +G V+SY ++K LF +G+VEEA +++ +L + ++ + TY +L+ L
Sbjct: 179 LWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEML-RSRVSPNCHTYTVLMEYL 237
Query: 408 CKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
G +AL + + + G D A + +I
Sbjct: 238 VATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 97 DEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNV 156
D A+ L+ +M R GC P V S+ + + + E A + + + VSPN TY V
Sbjct: 174 DGAMRLWEEM-RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTV 232
Query: 157 LIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
L++ L + E+A + M +G++PDK + LI A K G+ + V M E G
Sbjct: 233 LMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Query: 217 VEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
V V+ Y + ++ + LKA + LLRE
Sbjct: 293 V---VLRYPIFVEAL----ETLKAAGESDDLLRE 319
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 159/338 (47%), Gaps = 14/338 (4%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + ++ PD+AL LF+KM+ + + +L+A A E + +Y +
Sbjct: 202 SMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V+ N+ N ++ + K E AK L M D ++ T+++ A D A
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME----EKDNVTWTTMLDGYAISEDYEA 316
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A EV + M ++ D++ +N +I + ++G +A ++ L ++ + N ++ +
Sbjct: 317 AREVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
++ G I +KK+ + + S+LIH S+ G+L+ ++ V+ + R
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR--- 429
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
DV +AM+ GL G E+ +++ +M ++ + N +++ G V+EA ++
Sbjct: 430 -DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLE 421
+ + + + Y ++ L ++GYL KA++ +E
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 154/337 (45%), Gaps = 15/337 (4%)
Query: 149 PNVETYNVLIKVLCKKRE-FEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALE 207
PN +N LI+ + L +S P+K+++ LI AAA+ L+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 208 VFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ + V DV N +I +F GD A +++ + ++ VVS+N MI G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD-----VVSWNSMINGF 207
Query: 268 SRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDV 327
+ G ++LE++++M+ + K T ++ +++ NL+ ++V + RV+ ++
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 328 VTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELL 387
NAML+ K G +E++ L++ M + ++ +++ + G + E A + +
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEE---KDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 388 LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE-HRGGDVDVFAYSSMINALCKER 446
+ D + LI +NG N+AL V E + + ++ S ++A +
Sbjct: 325 PQK-----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 447 RLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
L+ + S + K G ++N HV + LI + K +L
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 169/395 (42%), Gaps = 62/395 (15%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVS---PNVETYNVLIKVLCKKREFEK 169
+P ++N+L+ A+A + +A+ D S PN T+ LIK +
Sbjct: 92 KPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
+ L + D F +LI+ GDL++A +VF + E+ DV+ +N +I+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK----DVVSWNSMIN 205
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSE---SLEIWERMKKN 286
GF + G KA E+++++ E+ S+ M+ LS C + ++ +++N
Sbjct: 206 GFVQKGSPDKALELFKKMESEDV----KASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
++ ++++ ++ G+++ A+R++ M + D VT ML+G E +
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAA 317
Query: 347 FELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT------- 399
E+ M Q ++++++N I +NGK EA+ ++ L + + ++ T
Sbjct: 318 REVLNSMPQ---KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 400 -------------------YGI---------LIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
+GI LIH K G L K+ +V E R D
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----D 430
Query: 432 VFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
VF +S+MI L ++A + M + K N
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
P + YN +IDGF K A M + + + P+VV+++ +I G + R +E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 279 IWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLC 338
I+ M + + TY++LIHG Q+G+LD AQ + +MI V+PD +T + ML GLC
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 339 KWGKVEESFELWEEMGQS 356
++ ++F + E++ +S
Sbjct: 127 SKKELRKAFAILEDLQKS 144
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
+ P TYN +I CK+ + AK +L M+ G PD ++ TLIN K ++ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
E+F EM RG+ + + Y +I GF + GD A ++ ++ V P+ ++++ M+ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAG 124
Query: 267 LSRCGRFSESLEIWERMKKNERKH 290
L ++ I E ++K+E H
Sbjct: 125 LCSKKELRKAFAILEDLQKSEDHH 148
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P ++NS+++ F ++ + A++ + G SP+V T++ LI CK + + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
M G+ + +Y TLI+ + GDL+AA ++ +EM GV PD + ++ ++ G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 234 SGDFLKANEMWERLLREE 251
+ KA + E L + E
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGK 376
M+ + P +T N+M++G CK +V+++ + + M G S +V++++ I G + +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 377 VEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYS 436
V+ M I+ + + ++ TY LIHG C+ G L+ A +L E G D +
Sbjct: 61 VDNGMEIF-CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 437 SMINALCKERRLDDAAGVVSLMDK 460
M+ LC ++ L A ++ + K
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 252 TVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGA 311
++FP ++YN MI G + R ++ + + M DV T+S+LI+G + +D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 312 QRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKG 370
++ +M R + + VT +++G C+ G ++ + +L EM G + + I+++ + G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 371 LFENGKVEEAMNIWELL 387
L ++ +A I E L
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ + K+ D+A + M GC P V +F++L+N + +++ + + F
Sbjct: 15 SMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G+ N TY LI C+ + + A+ LL M G+ PD ++ ++ + +L
Sbjct: 74 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 133
Query: 205 ALEVFDEMSE 214
A + +++ +
Sbjct: 134 AFAILEDLQK 143
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
+ TY +I G CK ++ A ++L+ +G DV +S++IN CK +R+D+ +
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 457 LMDKRGCKLNTHVCNPLIDGFIKNSNL 483
M +RG NT LI GF + +L
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDL 96
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 118 SFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWM 177
++ SLLN + E+AE ++P+ +YN L+ + K E EK +++ +
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 178 SGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG-VEPDVMCYNMIIDGFFKSGD 236
+ PD ++Y + A A D++ V +EM+ G V PD Y+ + + +G
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
KA + + L + T + +Y +I R G+ +E IW ++ K Y
Sbjct: 245 SQKAEKALQELEMKNTQ-RDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYL 303
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQS 356
++I L ++ +L GA+ ++K+ + D+ N ++ + G ++++ EL E+ +
Sbjct: 304 NMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRR 363
Query: 357 GSR-NVISYNIFIKGLFENGKVEEAM 381
G + N ++ IF+ ++G + A+
Sbjct: 364 GGKLNAKTWEIFMDYYVKSGDMARAL 389
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 45/312 (14%)
Query: 186 KFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWE 245
+ +YG+L+N K A + ++M E + P M YN ++ + K+G+ K M +
Sbjct: 123 ELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQ 182
Query: 246 RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
L + E V P+ +YNV W R L+
Sbjct: 183 EL-KAENVMPDSYTYNV-----------------WMR------------------ALAAT 206
Query: 306 GNLDGAQRVYKDM-IGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMG-QSGSRNVIS 363
++ G +RV ++M RV+PD T + M + G +++ + +E+ ++ R+ +
Sbjct: 207 NDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTA 266
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTT---YGILIHGLCKNGYLNKALQVL 420
Y I GK+ E IW L LA+ T+ Y +I L K L A +
Sbjct: 267 YQFLITLYGRLGKLTEVYRIWRSL----RLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 322
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+E + D+ + +I A +E + A + +RG KLN +D ++K+
Sbjct: 323 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 382
Query: 481 SNLTLLFKSLGK 492
++ + + K
Sbjct: 383 GDMARALECMSK 394
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 30/303 (9%)
Query: 89 AYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVS 148
A +S PD AL++FR + G + ++++++ ++ E
Sbjct: 81 ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 140
Query: 149 PNVETYNVLIKVLCKK-----REFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD-- 201
+V YN +I+ C + R F+ +LR +PD +Y L+++ KR +
Sbjct: 141 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDS---KPDLETYTLLLSSLLKRFNKL 197
Query: 202 ------LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVF- 254
L+A + +M GV PD NMII + K L+ +E R+ +E ++
Sbjct: 198 NVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKC---LEVDEAI-RVFKEMALYG 253
Query: 255 --PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQ 312
PN +Y+ +++G+ GR + L ++ M+ + Y LI LS LD A
Sbjct: 254 SEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAV 313
Query: 313 RVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE-------MGQSGSRNVISYN 365
V DM+ +SPD++T N +L LC+ G+ E+ E+ EE MG+ R ++
Sbjct: 314 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Query: 366 IFI 368
F+
Sbjct: 374 YFL 376
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 140/297 (47%), Gaps = 25/297 (8%)
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFD-EMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
L+P F+ ++ A + D + AL++F +RG + + Y+ +I K K
Sbjct: 69 LKPG-FTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMI----KQAITGKR 123
Query: 241 NEMWERLLREETVFP---NVVSYNVMIRGLSRCGR---FSESLEIWERM-KKNERKHDVF 293
N E L+ E +V YN +IR CGR F+ + +++ +M + ++ K D+
Sbjct: 124 NNFVETLIEEVIAGACEMSVPLYNCIIRFC--CGRKFLFNRAFDVYNKMLRSDDSKPDLE 181
Query: 294 TYSSLIHGLSQMGN--------LDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
TY+ L+ L + N L + + K M V PD N ++ K +V+E
Sbjct: 182 TYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDE 241
Query: 346 SFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ +++EM GS N +Y+ +KG+ E G+V + + ++ + + + + + Y +LI
Sbjct: 242 AIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVK-GMVPNGSCYMVLI 300
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
L L++A++V+ + D+ Y++++ LC+ R +A +V KR
Sbjct: 301 CSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
L R MS GL + +Y TLI + GD + A E+F EM GV PD+M YN+++DG
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 233 KSGDFLKA------NEMWERL--LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
K+G KA + W+ L + V PNVV+Y MI G + G E+ ++ +MK
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
++ D TY++LI + G+ + + K+M R + D T ++ + G+++
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST-YGLVTDMLHDGRLD 181
Query: 345 ESF 347
+ F
Sbjct: 182 KGF 184
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+E++ M + + TY++LI GL Q G+ D AQ ++K+M+ V PD++T N +L+G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 337 LCK---------WGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWEL 386
LCK GKVE+ ++L+ + G + NV++Y I G + G EEA ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 387 LLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAE--HRGGDVDVFAYSSMINALCK 444
+ + L DS TY LI ++G + ++++E GD + ++ +
Sbjct: 121 MKEDGPLP-DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG---LVTDMLH 176
Query: 445 ERRLD 449
+ RLD
Sbjct: 177 DGRLD 181
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 32/214 (14%)
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+E+F EMS+RG+ + + Y +I G F++GD A E+++ ++ + V P++++YN+++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILLD 59
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
GL + G+ ++L K E D+F SL + V P
Sbjct: 60 GLCKNGKLEKALVAG----KVEDGWDLFCSLSL----------------------KGVKP 93
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS-RNVISYNIFIKGLFENG-KVEEAMNI 383
+VVT M++G CK G EE++ L+ +M + G + +YN I+ +G K A I
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 153
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKAL 417
E+ A D++TYG L+ + +G L+K
Sbjct: 154 KEMR--SCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 29/210 (13%)
Query: 100 LNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIK 159
+ LFR+M + G ++ +L+ + + A++ F + GV P++ TYN+L+
Sbjct: 1 MELFREMSQR-GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 160 VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP 219
LCK + EKA L+ + G ++F +S +GV+P
Sbjct: 60 GLCKNGKLEKA---------------------LVAGKVEDG-----WDLFCSLSLKGVKP 93
Query: 220 DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEI 279
+V+ Y +I GF K G +A ++ R ++E+ P+ +YN +IR R G + S E+
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLF-RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 280 WERMKKNERKHDVFTYSSLIHGLSQMGNLD 309
+ M+ D TY L+ + G LD
Sbjct: 153 IKEMRSCRFAGDASTY-GLVTDMLHDGRLD 181
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAE-------- 136
TL++ + D A +F++M G P + ++N LL+ + + E+A
Sbjct: 21 TLIQGLFQAGDCDMAQEIFKEMVSD-GVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDG 79
Query: 137 -KFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINA 195
F GV PNV TY +I CKK E+A L R M G PD +Y TLI A
Sbjct: 80 WDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRA 139
Query: 196 AAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
+ GD A+ E+ EM D Y ++ D
Sbjct: 140 HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 5/261 (1%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYF--DTAGVSPNVETYNVLIKVLCKKRE--FEKAKGLLR 175
NS+L ++ K F + P T+ +L+ C+ + +L
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLN 148
Query: 176 WMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSG 235
M GL PD+ + + + + G ++ A ++ E++E+ PD YN ++ K
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 236 DFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTY 295
D E + + + V P++VS+ ++I + E++ + ++ K D F Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 296 SSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
++++ G + A VYK M V PD +T N ++ GL K G+VEE+ + M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 356 SG-SRNVISYNIFIKGLFENG 375
+G + +Y + G+ G
Sbjct: 329 AGYEPDTATYTSLMNGMCRKG 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 29/307 (9%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFF-----AYFDTAGVSPNVETYNVLIKVLCKKREFE 168
P + SL N+ A + + KF +Y A V+ V+ + ++K
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK--------- 113
Query: 169 KAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD--LNAALEVFDEMSERGVEPDVMCYNM 226
S RP + ++ L++ A + D ++ V + M G+EPD + ++
Sbjct: 114 ---------SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDI 164
Query: 227 IIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKN 286
+ ++G +A ++ + L + + P+ +YN +++ L +C E + M+ +
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSP-PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
Query: 287 -ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+ K D+ +++ LI + NL A + + PD N ++ G C K E
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 346 SFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ ++++M + G + I+YN I GL + G+VEEA + ++ + D+ TY L+
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV-DAGYEPDTATYTSLM 342
Query: 405 HGLCKNG 411
+G+C+ G
Sbjct: 343 NGMCRKG 349
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+ V+ ++ +R L GR E+ ++ + + + D +TY+ L+ L + +L
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 315 YKDMIGR-RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLF 372
+M V PD+V+ +++ +C + E+ L ++G +G + + YN +KG
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 373 ENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDV 432
K EA+ +++ + E + D TY LI GL K G + +A L+ G + D
Sbjct: 277 TLSKGSEAVGVYKKM-KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 433 FAYSSMINALCKE 445
Y+S++N +C++
Sbjct: 336 ATYTSLMNGMCRK 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 232 FKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHD 291
FKS + A ++ + + ++ +N +++ ++++++++ + K++
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 292 VFTYSSLI---HGL-SQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+ LI H + ++ RV M+ + PD VT + + LC+ G+V+E+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 348 ELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
+L +E+ + S + +YN +K L + + + + + + D ++ ILI
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 407 LCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLN 466
+C + L +A+ ++ + + G D F Y++++ C + +A GV M + G + +
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 467 THVCNPLIDGFIK 479
N LI G K
Sbjct: 300 QITYNTLIFGLSK 312
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 189/404 (46%), Gaps = 31/404 (7%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ K DEA +LFR M C ++NS+++ FA ++ E A +FA
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPERDQC-----TWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G N ++ ++ + K + ++ D + L++ +K G++N
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A VFDEM +R +V+ +N +I F ++G ++A ++++ +L E V P+ V+ +I
Sbjct: 206 AQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMML-ESRVEPDEVTLASVI 260
Query: 265 RGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
+ E+ R+ KN++ ++D+ ++ + ++ + A+ ++ M R
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-- 318
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNI 383
+V+ +M++G + + ++ +M + RNV+S+N I G +NG+ EEA+++
Sbjct: 319 --NVIAETSMISGYAMAASTKAARLMFTKMAE---RNVVSWNALIAGYTQNGENEEALSL 373
Query: 384 WELLLGETALAVDSTTYGILIHGLCKN-GYLNKALQ----VLEEA--EHRGGDVDVFAYS 436
+ LL E+ + IL C + L+ +Q VL+ G + D+F +
Sbjct: 374 FCLLKRESVCPTHYSFANIL--KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 437 SMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
S+I+ K +++ V M +R C N +I GF +N
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCV----SWNAMIIGFAQN 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 113/224 (50%), Gaps = 13/224 (5%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G + F LI+A +K G L +VFD+M +R ++ +N ++ G K G +A
Sbjct: 50 GFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDEA 105
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
+ ++ + + ++N M+ G ++ R E+L + M K + ++++S++
Sbjct: 106 DSLFRSMPERDQ-----CTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
S + +++ +V+ + DV +A+++ K G V ++ +++EMG RN
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD---RN 217
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
V+S+N I +NG EA+++++++L E+ + D T +I
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMML-ESRVEPDEVTLASVI 260
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+ YAK S EA +F M V + S+++ +A++ + A F T
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPI-----RNVIAETSMISGYAMAASTKAARLMF----T 344
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
NV ++N LI + E E+A L + + P +S+ ++ A A +L+
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 205 ALEVFDEMSERGV------EPDVMCYNMIIDGFFKSG----DFLKANEMWERLLREETVF 254
++ + + G E D+ N +ID + K G +L +M ER
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-------- 456
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
+ VS+N MI G ++ G +E+LE++ M ++ K D T ++ G ++ +
Sbjct: 457 -DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 315 YKDMI-GRRVSP--DVVTCNAMLNGLCKWGKVEESFELWEEM 353
+ M V+P D TC M++ L + G +EE+ + EEM
Sbjct: 516 FSSMTRDFGVAPLRDHYTC--MVDLLGRAGFLEEAKSMIEEM 555
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 20/264 (7%)
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
++I+ A AA +F +M+ER +V+ +N +I G+ ++G+ +A ++ LL+
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQNGENEEALSLF-CLLKR 379
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK------HDVFTYSSLIHGLSQ 304
E+V P S+ +++ + ++ + K+ K D+F +SLI +
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 305 MGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVIS 363
G ++ V++ M+ R D V+ NAM+ G + G E+ EL+ EM +SG + + I+
Sbjct: 440 CGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 364 YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEA 423
+ G VEE + + + + +A Y ++ L + G+L +A ++EE
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 424 EHRGGDVDVFAYSSMINALCKERR 447
+ D + S++ A CK R
Sbjct: 556 PMQP---DSVIWGSLL-AACKVHR 575
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
N +I S+CG + +++++M + +++T++S++ GL+++G LD A +++ M
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQ----RNIYTWNSVVTGLTKLGFLDEADSLFRSMPE 114
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEE 379
R D T N+M++G + + EE+ + M + G N S+ + + +
Sbjct: 115 R----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNK 170
Query: 380 AMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMI 439
+ + L+ ++ D L+ K G +N A +V +E GD +V +++S+I
Sbjct: 171 GVQVHS-LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM----GDRNVVSWNSLI 225
Query: 440 NALCKERRLDDAAGVVSLM 458
+ +A V +M
Sbjct: 226 TCFEQNGPAVEALDVFQMM 244
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVE 344
K+ +++F + LI S+ G+L+ ++V+ M R ++ T N+++ GL K G ++
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGFLD 103
Query: 345 ESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
E+ L+ M + R+ ++N + G ++ + EEA+ + ++ E ++ ++ ++
Sbjct: 104 EADSLFRSMPE---RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE-GFVLNEYSFASVL 159
Query: 405 HGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
+NK +QV DV+ S++++ K ++DA V M R
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR--- 216
Query: 465 LNTHVCNPLIDGFIKN 480
N N LI F +N
Sbjct: 217 -NVVSWNSLITCFEQN 231
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 170/352 (48%), Gaps = 27/352 (7%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFF---AYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
P S+N +L+ + + +E+A+ FF + D A ++N +I ++ E EKA
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA-------SWNTMITGYARRGEMEKA 174
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
+ L M + ++ S+ +I+ + GDL A F RG V+ + +I G
Sbjct: 175 RELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITG 226
Query: 231 FFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
+ K+ K E+ E + ++ TV N+V++N MI G R + L+++ M + +
Sbjct: 227 YMKA----KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELW 350
+ SS + G S++ L +++++ + + DV ++++ CK G++ ++++L+
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 351 EEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKN 410
E M + ++V+++N I G ++G ++A+ ++ ++ + + D T+ ++
Sbjct: 343 EVMKK---KDVVAWNAMISGYAQHGNADKALCLFREMI-DNKIRPDWITFVAVLLACNHA 398
Query: 411 GYLNKALQVLEE-AEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKR 461
G +N + E + Y+ M++ L + +L++A ++ M R
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++ Y + S P++ L LFR M G RP +S L + + +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ + +V LI + CK E A L M + D ++ +I+ A+ G+ +
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADK 368
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL +F EM + + PD + + ++ +G +E ++R+ V P Y M+
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDM 318
L R G+ E+L++ M R H + G L GA RV+K++
Sbjct: 429 DLLGRAGKLEEALKLIRSMPF--RPH-----------AAVFGTLLGACRVHKNV 469
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 166/357 (46%), Gaps = 37/357 (10%)
Query: 100 LNLFRKMDRVFGCRPGV--RSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
++LF ++ + G R V ++F +L A + + ++ +F + G NVET N
Sbjct: 128 MDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRG 187
Query: 158 IKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGV 217
++ LCK++ E+AK + + ++PD+ +Y T+I GDL A ++++ M + G
Sbjct: 188 VETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
Query: 218 EPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESL 277
+ D+ I++ K F +A++++ ++ + + Y VMI L + GR +
Sbjct: 247 DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMAR 306
Query: 278 EIWERMKKNERKHDVFTYSSLIHGL-------SQMGNLDGAQRVYKDMIGRRVSPDVVTC 330
++++ M++ D T++SLI+GL G ++G + +PD+
Sbjct: 307 KVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE-----------NPDISIY 355
Query: 331 NAMLNGLCKWGKVEESFELWEEMGQSGSRNVI-SYNIFIKG-LFENGKVEEAMNIWELLL 388
+ ++ GL K + E+ E++ +M Q G ++ +Y + ++G L G+
Sbjct: 356 HGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRK----------- 404
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
G L T I + G+ K G + + +E RG +V F YS ++ E
Sbjct: 405 GPDPLVNFDT---IFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSNE 458
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-SRNVISYNIFIKGLFENGKVEEAM 381
+ PD +T M+ G C G + E+ +LW M G ++ + ++ L + + +EA
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ +++ + +D Y ++I LCKNG ++ A +V +E RG VD ++S+I
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
L +RR+ +A G+V ++ + + + LI G +K
Sbjct: 331 LLVKRRVVEAYGLVEGVENP----DISIYHGLIKGLVK 364
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 184 PDKFSYGTLINAAAKRGDLNAALEVFDEM---SERGVEPDVMCYNMIIDG-----FF--- 232
P+ F Y T+I ++ + L F M E + P + ++ +I FF
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 233 --------KSGDFLKANEMWERLLR---------------EETVFPNVVSYNVMIRGLSR 269
K+G FL + +LR +E P+VV ++V++ G R
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSPDVV 328
CG SE LE+++ M + D F+ ++ + +Q+G L + +++ + +R + DV
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
A+++ K G +E + E++E++ + RNV S+ I G G ++A + +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTR---RNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA-YSSMINALCKERR 447
E + DS ++ G+L + +LE E R G YS +++ +C+ R
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 448 LDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
LDDA + L++K K V L++G + N+ L
Sbjct: 373 LDDA---LDLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 24/293 (8%)
Query: 183 RPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANE 242
+PD + L+N + G + LEVF EM RG+EPD + + G +
Sbjct: 180 QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKW 239
Query: 243 MWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGL 302
+ E + ++ + +V ++ ++CG ++E++E++ + +VF++++LI G
Sbjct: 240 IHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR----NVFSWAALIGGY 295
Query: 303 SQMGNLDGAQRVYKDMIGRR--VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
+ G A D I R + PD V +L G +EE + E M +R
Sbjct: 296 AAYGYAKKATTCL-DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM---EARY 351
Query: 361 VIS-----YNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLC---KNGY 412
I+ Y+ + + G++++A+++ E + + ++ +G L++G C KN
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIE----KMPMKPLASVWGALLNG-CRTHKNVE 406
Query: 413 LNK-ALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
L + A+Q L + E + + A + N +R +A V ++++RG +
Sbjct: 407 LGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIR 459
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 149 PNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEV 208
P+V ++VL+ + + + + M G+ PD+FS T + A A+ G L +
Sbjct: 181 PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 209 FDEM-SERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGL 267
+ + +R +E DV ++D + K G A E++E+L R NV S+ +I G
Sbjct: 241 HEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR-----NVFSWAALIGGY 295
Query: 268 SRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR-VSP 325
+ G ++ +R+++ + K D ++ + G L+ + + ++M R ++P
Sbjct: 296 AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITP 355
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEM 353
+ +++ +C+ G+++++ +L E+M
Sbjct: 356 KHEHYSCIVDLMCRAGRLDDALDLIEKM 383
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
L+ Y K ++ ++A LF +M + V S+ ++++A++ + ++A +
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQ-----RNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
V PNV TY+ VL + L + GL D F LI+ AK G+
Sbjct: 156 DNVRPNVYTYS---SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL VFDEM V D + +N II GF ++ A E+++R+ R + +V+
Sbjct: 213 ALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL- 267
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
R + ++ + K ++ D+ ++L+ + G+L+ A RV+ M R
Sbjct: 268 RACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKER--- 322
Query: 325 PDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNI 383
DV+T + M++GL + G +E+ +L+E M SG++ N I+ + G +E+
Sbjct: 323 -DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYY 381
Query: 384 WELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALC 443
+ + + YG +I L K G L+ A+++L E E + D + +++ A C
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGA-C 437
Query: 444 KERR 447
+ +R
Sbjct: 438 RVQR 441
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 67/336 (19%)
Query: 134 RAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLI 193
RA K + G+ + TY+ LIK R + + R + G RP F LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 194 NAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETV 253
N K LN A ++FD+M +R +V+ + +I + K KA E+ +LR+ V
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRD-NV 158
Query: 254 FPNVVSYNVMIR---GLS-----RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQM 305
PNV +Y+ ++R G+S CG E LE DVF S+LI +++
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-----------SDVFVRSALIDVFAKL 207
Query: 306 GNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG-------- 357
G + A V+ +M V+ D + N+++ G + + + + EL++ M ++G
Sbjct: 208 GEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 358 --------------------------SRNVISYNIFIKGLFENGKVEEAMNIWELLLGET 391
+++I N + + G +E+A+ ++ +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER- 322
Query: 392 ALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRG 427
D T+ +I GL +NGY +AL++ E + G
Sbjct: 323 ----DVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 55/396 (13%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ + + DEA +F +D ++++L FA ++A +FF
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVL-----YHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
V P V + L+KV + E K + + G D F+ L N AK +N A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+VFD M ER D++ +N I+ G+ ++G A EM + + EE + P+ ++ ++
Sbjct: 190 RKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMC-EENLKPSFITIVSVLP 244
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
+S S E IHG + D +
Sbjct: 245 AVSALRLISVGKE--------------------IHGYAMRSGFDSLVNI----------- 273
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
A+++ K G +E + +L++ M + RNV+S+N I +N +EAM I++
Sbjct: 274 ----STALVDMYAKCGSLETARQLFDGMLE---RNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKE 445
+L E D + G L H G L + + + + G D +V +S+I+ CK
Sbjct: 327 KMLDEGVKPTDVSVMGAL-HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 446 RRLDDAAGVVSLMDKRGCKLNTHVC-NPLIDGFIKN 480
+ +D AA + + R T V N +I GF +N
Sbjct: 386 KEVDTAASMFGKLQSR-----TLVSWNAMILGFAQN 416
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 181/428 (42%), Gaps = 53/428 (12%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T+LK +AK S D+AL F +M R P V +F LL + ++
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+G S ++ L + K R+ +A+ + M D S+ T++ ++ G
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP----ERDLVSWNTIVAGYSQNGMARM 219
Query: 205 ALEVFDEMSERGVEP----------------------DVMCYNM-------------IID 229
ALE+ M E ++P ++ Y M ++D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+ K G A ++++ +L NVVS+N MI + E++ I+++M K
Sbjct: 280 MYAKCGSLETARQLFDGMLER-----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+ +H + +G+L+ + ++K + + +V N++++ CK +V+ + +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 350 WEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCK 409
+ G+ SR ++S+N I G +NG+ +A+N + + T + D+ TY +I + +
Sbjct: 395 F---GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAE 450
Query: 410 NGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHV 469
+ A + D +VF +++++ K + A + +M +R +
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTT 506
Query: 470 CNPLIDGF 477
N +IDG+
Sbjct: 507 WNAMIDGY 514
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 110 FGCRPGVRSF----NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKR 165
+ R G S +L++ +A E A + F + NV ++N +I +
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLF----DGMLERNVVSWNSMIDAYVQNE 316
Query: 166 EFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYN 225
++A + + M G++P S ++A A GDL + E G++ +V N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
+I + K + A M+ +L +VS+N MI G ++ GR ++L + +M+
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSR-----TLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
K D FTY S+I ++++ A+ ++ ++ + +V A+++ K G +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 346 SFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIH 405
+ +++ M + R+V ++N I G +G + A+ ++E + T + + T+ +I
Sbjct: 492 ARLIFDMMSE---RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT-IKPNGVTFLSVIS 547
Query: 406 GLCKNGYLNKALQVLE-EAEHRGGDVDVFAYSSMINALCKERRLDDA 451
+G + L+ E+ ++ + Y +M++ L + RL++A
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ Y K D A ++F K+ + S+N+++ FA + + A +F+ +
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQS-----RTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRP--DK--FSYGTLINAAAKRG 200
V P+ TY +I + + AK W+ GV +R DK F L++ AK G
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAK----WIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 201 DLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSY 260
+ A +FD MSER V +N +IDG+ G A E++E +++ T+ PN V++
Sbjct: 488 AIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAALELFEE-MQKGTIKPNGVTF 542
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKN---ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKD 317
+I S G L+ + MK+N E D Y +++ L + G L+ A
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 318 MIGRRVSPDVVTCNAMLNGLCKWGK----VEESFE-LWEEMGQSGSRNVISYNIF 367
M V P V AML G C+ K E++ E L+E G +V+ NI+
Sbjct: 601 M---PVKPAVNVYGAML-GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 161/361 (44%), Gaps = 32/361 (8%)
Query: 110 FGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEK 169
FG + + N+L+ +++ + A + F +V TYNVLI L K RE +
Sbjct: 146 FGLLSDLFTLNTLIRVYSLIAPIDSALQLF----DENPQRDVVTYNVLIDGLVKAREIVR 201
Query: 170 AKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIID 229
A+ L M LR D S+ +LI+ A+ A+++FDEM G++PD + +
Sbjct: 202 ARELFDSMP---LR-DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 230 GFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERK 289
+SGD+ K + + R+ + ++ ++ ++CG ++EI+E
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG-LVDFYAKCGFIDTAMEIFELCSDKT-- 314
Query: 290 HDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL 349
+FT++++I GL+ GN + ++ M+ + PD VT ++L G G V+E+ L
Sbjct: 315 --LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 350 WEEMGQ--SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLG-----ETALAVDSTTYGI 402
+++M +R + Y L G +EEA + E + E LA G
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 403 LIHGLCKNGYLNKALQVLEEAEHRGGDV---DVFAYSSMINALCKERRLDDAAGVVSLMD 459
IHG +++ E+A +R + D Y M+ R ++ V ++D
Sbjct: 433 RIHG---------NIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIID 483
Query: 460 K 460
+
Sbjct: 484 R 484
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+ YA+ + EA+ LF +M G +P + S L+A A S W++ + Y
Sbjct: 219 SLISGYAQMNHCREAIKLFDEM-VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ + L+ K + A + S L F++ +I A G+
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL----FTWNAMITGLAMHGNGEL 333
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
++ F +M G++PD + + ++ G SG +A +++++ V + Y M
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA 393
Query: 265 RGLSRCGRFSESLEIWERMKKN-ERKHDVFTYSSLIHGLSQMGNLDGAQR 313
L R G E+ E+ E+M K+ + + +S L+ G GN++ A++
Sbjct: 394 DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 164/383 (42%), Gaps = 6/383 (1%)
Query: 101 NLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF-DTAGVSPNVETYNVLIK 159
N+ +K+DR V + L+ +QW +A + F + P TY L+
Sbjct: 73 NVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLV 132
Query: 160 VLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEM-SERGVE 218
+L K + +A+ L M GL P Y L+ A + ++ A + D+M S +
Sbjct: 133 LLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQ 192
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
PDV Y+ ++ + F + +++ + E + PN V+ N+++ G R GRF + +
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKE-MDERLITPNTVTQNIVLSGYGRVGRFDQMEK 251
Query: 279 IWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGL 337
+ M + K DV+T + ++ MG +D + Y+ + P+ T N ++
Sbjct: 252 VLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY 311
Query: 338 CKWGKVEESFELWEEMGQ-SGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
K ++ + E M + +YN I+ + G + ++ + E + D
Sbjct: 312 GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSE-GMKAD 370
Query: 397 STTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVS 456
+ T+ LI+G G +K + ++ A + Y+++I+A K L + V
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430
Query: 457 LMDKRGCKLNTHVCNPLIDGFIK 479
M +R C ++ +++ + K
Sbjct: 431 RMKERQCVCDSRTFEIMVEAYEK 453
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 141/374 (37%), Gaps = 43/374 (11%)
Query: 98 EALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVL 157
+AL +F + +P ++ LL S Q RA+K F G+ P VE Y L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 158 IKVLCKKREFEKAKGLLRWMSGV-GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERG 216
+ + + A +L M +PD F+Y TL+ A + ++ EM ER
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 217 VEPDVMCYNMIIDGFFKSGDF-----------------------------------LKAN 241
+ P+ + N+++ G+ + G F +
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 242 EMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG 301
E W R + P ++N++I + + + + E M+K E TY+++I
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345
Query: 302 LSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWG---KVEESFELWEEMGQSGS 358
+ +G+ + + M + D T ++NG G KV S +L +
Sbjct: 346 FADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKF--EIP 403
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQ 418
N YN I + + E ++ + + E DS T+ I++ K G +N +
Sbjct: 404 ENTAFYNAVISACAKADDLIEMERVY-IRMKERQCVCDSRTFEIMVEAYEKEG-MNDKIY 461
Query: 419 VLEEAEHRGGDVDV 432
LE+ + D V
Sbjct: 462 YLEQERQKLMDRTV 475
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 131/340 (38%), Gaps = 44/340 (12%)
Query: 5 PKPLSPHRLLNLLKSEKNPHSALQLFQHATRH---PGYTHSSAVLQHVLRRVASDPTLLP 61
PK + +LL LL P+ A +LF P +A+L R L+
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTR-----SNLID 176
Query: 62 HAPHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVF----------- 110
A I+ +++ C TLLKA S D +L+++MD
Sbjct: 177 DAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIV 236
Query: 111 ------------------------GCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAG 146
C+P V + N +L+ F + + E ++ F G
Sbjct: 237 LSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFG 296
Query: 147 VSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAAL 206
+ P T+N+LI KKR ++K ++ +M + +Y +I A A GD
Sbjct: 297 IEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNME 356
Query: 207 EVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRG 266
FD+M G++ D + +I+G+ +G F K + + E + N YN +I
Sbjct: 357 LTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFE-IPENTAFYNAVISA 415
Query: 267 LSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
++ E ++ RMK+ + D T+ ++ + G
Sbjct: 416 CAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEG 455
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 17/333 (5%)
Query: 83 PLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYF 142
P+TLL+ + + L ++G + NS+LN + + A+ F
Sbjct: 147 PVTLLEMLSG-VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 143 DTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDL 202
+ ++ ++N +I + LL M G GLRPD+ ++G ++ + DL
Sbjct: 206 E----QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL 261
Query: 203 NAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPN--VVSY 260
+ ++ + G + D+ +I + K G E R+L ET+ PN VV +
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK----EEASYRVL--ETI-PNKDVVCW 314
Query: 261 NVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIG 320
VMI GL R GR ++L ++ M ++ +S++ +Q+G+ D V+ ++
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 321 RRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEA 380
+ D N+++ K G +++S ++E M + R+++S+N I G +N + +A
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE---RDLVSWNAIISGYAQNVDLCKA 431
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
+ ++E + +T VDS T L+ G L
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/412 (18%), Positives = 167/412 (40%), Gaps = 52/412 (12%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P +F SLL A A ++ G S + + L+ + K A+ +
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEP-------------- 219
M D + +I ++ G + A + +EM +G++P
Sbjct: 104 FEEMR----ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 220 ------------------DVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
D+ N +++ + K A ++++++ + + +VS+N
Sbjct: 160 ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD-----MVSWN 214
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
MI G + G SE L++ RM+ + + D T+ + + M +L+ + ++ ++
Sbjct: 215 TMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT 274
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAM 381
D+ A++ K GK E S+ + E + +++V+ + + I GL G+ E+A+
Sbjct: 275 GFDVDMHLKTALITMYLKCGKEEASYRVLETI---PNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ +L ++ + S ++ + G + V G +D A +S+I
Sbjct: 332 IVFSEML-QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 442 LCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT---LLFKSL 490
K LD + + M++R + N +I G+ +N +L LLF+ +
Sbjct: 391 YAKCGHLDKSLVIFERMNER----DLVSWNAIISGYAQNVDLCKALLLFEEM 438
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 15/246 (6%)
Query: 247 LLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMG 306
++R +V + +N I LS G + L + M N+ D FT+ SL+ + +
Sbjct: 1 MIRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQ 60
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI 366
L +++ ++ S D ++++N K+G + + +++EEM + R+V+ +
Sbjct: 61 RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE---RDVVHWTA 117
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLN-KALQVLEE-AE 424
I G V EA ++ + + T +L +G L LQ L + A
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML------SGVLEITQLQCLHDFAV 171
Query: 425 HRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLT 484
G D D+ +SM+N CK + DA + M++R + N +I G+ N++
Sbjct: 172 IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMS 227
Query: 485 LLFKSL 490
+ K L
Sbjct: 228 EILKLL 233
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 133/342 (38%), Gaps = 72/342 (21%)
Query: 189 YGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCY---------------------NMI 227
+ + IN + GD L F M + PD + ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 228 IDGFFKSGDFLKANEM-----------WERLLREETVFPNVVSYNVMIRGLSRCGRFSES 276
++GF S DF ++ + R + EE +VV + MI SR G E+
Sbjct: 74 VNGF--SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 277 LEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNG 336
+ M+ K T ++ G+ ++ L Q ++ + D+ N+MLN
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 337 LCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVD 396
CK V ++ +L+++M Q R+++S+N I G G + E + + + G+ L D
Sbjct: 189 YCKCDHVGDAKDLFDQMEQ---RDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPD 244
Query: 397 STTYG---------------------ILIHGLCKNGYLNKALQVL------EEAEHRGGD 429
T+G I+ G + +L AL + EEA +R +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 430 V----DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNT 467
DV ++ MI+ L + R + A V S M + G L++
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 155/337 (45%), Gaps = 21/337 (6%)
Query: 113 RPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKG 172
RP +N ++ F+ S++ ER+ + + N T+ L+K FE+
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 173 LLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFF 232
+ ++ +G D ++ +LIN+ A G+ A +FD R EPD + +N +I G+
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD----RIPEPDDVSWNSVIKGYV 192
Query: 233 KSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
K+G A ++ ++ + N +S+ MI G + E+L+++ M+ ++ + D
Sbjct: 193 KAGKMDIALTLFRKMAEK-----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
+ ++ + +Q+G L+ + ++ + R+ D V +++ K G++EE+ E+++
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 353 MGQSGSRNVISYNIFIKGLFENGKVEEA---------MNIWELLLGETALAVDSTTYGIL 403
+ + ++V ++ I G +G EA M I ++ TA+ + G++
Sbjct: 308 IKK---KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
G + + + EH G VD+ + +++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 401
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 20/273 (7%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++K Y K D AL LFRKM S+ ++++ + ++ + A + F
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKM-----AEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 145 AGVSP-NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLN 203
+ V P NV N L + E+ K + +++ +R D LI+ AK G++
Sbjct: 241 SDVEPDNVSLANAL-SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
ALEVF + ++ V+ + +I G+ G +A + +++ + PNV+++ +
Sbjct: 300 EALEVFKNIKKKSVQA----WTALISGYAYHGHGREAISKFME-MQKMGIKPNVITFTAV 354
Query: 264 IRGLSRCGRFSESLEIWERMKKNER-KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR 322
+ S G E I+ M+++ K + Y ++ L + G LD A+R ++M
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM---P 411
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQ 355
+ P+ V A+L K ++ ++ EL EE+G+
Sbjct: 412 LKPNAVIWGALL----KACRIHKNIELGEEIGE 440
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 108/225 (48%), Gaps = 8/225 (3%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
P+ +N+MIRG S SL +++RM + H+ +T+ SL+ S + + ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFEN 374
+ + DV N+++N G + + L++ + + +S+N IKG +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD---VSWNSVIKGYVKA 194
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
GK++ A+ ++ + + A+ ++ +I G + +ALQ+ E ++ + D +
Sbjct: 195 GKMDIALTLFRKMAEKNAI-----SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
++ ++A + L+ + S ++K ++++ + LID + K
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 22/250 (8%)
Query: 121 SLLNAFAVSEQWERAEKFFA-YFDTAGVSPNVE---------------TYNVLIKVLCKK 164
SL++ ++ E AEK + +F A VS +E ++N +I K
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 165 REFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCY 224
+ E A+ L M +G+ PDKF+Y T+++ A ++ ++ ++ ++ DV
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 225 NMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
+ ++D + K GD + M+E+ LR + V++N MI G + G+ E+++++ERM
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRD-----FVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLD-GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKV 343
K + T+ S++ + MG +D G + Y + P + + M++ L K GKV
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 344 EESFELWEEM 353
+ + EL EM
Sbjct: 757 KRALELIREM 766
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 138/293 (47%), Gaps = 21/293 (7%)
Query: 182 LRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKAN 241
+ PD+F++G+++ A G L +E+ + + G+ + +ID + K G +A
Sbjct: 479 IEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 242 EMWERLLREETVFPNV---------------VSYNVMIRGLSRCGRFSESLEIWERMKKN 286
++ R + V + VS+N +I G + ++ ++ RM +
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 287 ERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
D FTY++++ + + + ++++ +I + + DV C+ +++ K G + +S
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 347 FELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
++E +S R+ +++N I G +GK EEA+ ++E ++ E + + T+ ++
Sbjct: 658 RLMFE---KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-IKPNHVTFISILRA 713
Query: 407 LCKNGYLNKALQVLEEAEHRGG-DVDVFAYSSMINALCKERRLDDAAGVVSLM 458
G ++K L+ + G D + YS+M++ L K ++ A ++ M
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 13/278 (4%)
Query: 108 RVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREF 167
R+ V SFN L +S + + +F F S + ++ + K K+
Sbjct: 6 RLLHMTRSVVSFNRCLTE-KISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGAL 64
Query: 168 EKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMI 227
E K M G RP F L+ D +A VFD+M R DV+ +N +
Sbjct: 65 ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR----DVVSWNKM 120
Query: 228 IDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNE 287
I+G+ KS D KAN + + +VVS+N M+ G + G +S+E++ M +
Sbjct: 121 INGYSKSNDMFKANSFFNMM-----PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 288 RKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESF 347
+ D T++ ++ S + + +++ ++ DVV +A+L+ K + ES
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 348 ELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
+++ + + +N +S++ I G +N + A+ ++
Sbjct: 236 RVFQGIPE---KNSVSWSAIIAGCVQNNLLSLALKFFK 270
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 44/367 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
++L Y + +++ +F M R G R+F +L + E +
Sbjct: 150 SMLSGYLQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDK--FSYGTLINAAAKRGDL 202
G +V + L+ + K + F ++ LR G+ P+K S+ +I + L
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVES---LRVFQGI---PEKNSVSWSAIIAGCVQNNLL 262
Query: 203 NAALEVFDEMSERGVEPDVMCYNMII--------------------------DGFFKSGD 236
+ AL+ F EM + Y ++ DG ++
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 237 ---FLKANEMWE-RLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDV 292
+ K + M + ++L + + N SYN MI G S+ ++L ++ R+ + D
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 293 FTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEE 352
+ S + + + L ++Y I +S DV NA ++ K + E+F +++E
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 353 MGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGY 412
M + R+ +S+N I +NGK E + ++ +L + + D T+G ++ C G
Sbjct: 443 MRR---RDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKA-CTGGS 497
Query: 413 LNKALQV 419
L +++
Sbjct: 498 LGYGMEI 504
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 124/220 (56%), Gaps = 22/220 (10%)
Query: 188 SYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERL 247
S+ ++++ G A ++FDEMSER +V+ +N ++ G+ K+ ++A ++E L
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFE-L 104
Query: 248 LREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERM-KKNERKHDVFTYSSLIHGLSQMG 306
+ E NVVS+ M++G + G E+ ++ RM ++NE +++ + GL G
Sbjct: 105 MPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE-----VSWTVMFGGLIDDG 155
Query: 307 NLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNI 366
+D A+++Y DM+ + DVV M+ GLC+ G+V+E+ +++EM + RNV+++
Sbjct: 156 RIDKARKLY-DMMPVK---DVVASTNMIGGLCREGRVDEARLIFDEMRE---RNVVTWTT 208
Query: 367 FIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHG 406
I G +N +V+ A ++E++ +T ++ S G + G
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSG 248
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++KAY ++ EAL+LF +M + G RP S S+L+ A + + A+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
+V +VL+ + K E KAK + S D + ++I+ A G A
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS----KDIIMWNSIISGYASHGLGEEA 416
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L++F EM G P+ + I+ +G + E++E + + V P V Y+ +
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L R G+ +++E+ E M K D + +L+ LD A+ K + P
Sbjct: 477 MLGRAGQVDKAMELIESMTI---KPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EP 531
Query: 326 DVVTCNAMLNGL----CKWGKV 343
D +L+ + KWG V
Sbjct: 532 DNAGTYVLLSSINASRSKWGDV 553
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 153/371 (41%), Gaps = 63/371 (16%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
T++ Y + + D A LF M S+ S+L + +S + E AE+FF +
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKTEV-----SWTSMLLGYTLSGRIEDAEEFF---EV 259
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+ P V N +I + E KA+ + M D ++ +I A ++G
Sbjct: 260 MPMKP-VIACNAMIVGFGEVGEISKARRVFDLMED----RDNATWRGMIKAYERKGFELE 314
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
AL++F +M ++GV P FP+++S
Sbjct: 315 ALDLFAQMQKQGVRPS---------------------------------FPSLISI---- 337
Query: 265 RGLSRCGRFSE---SLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
LS C + ++ + + + DV+ S L+ + G L A+ V+ R
Sbjct: 338 --LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD----R 391
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEA 380
S D++ N++++G G EE+ +++ EM SG+ N ++ + GK+EE
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 381 MNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ I+E + + + Y + L + G ++KA++++E + D + +++
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP---DATVWGALLG 508
Query: 441 ALCKERRLDDA 451
A RLD A
Sbjct: 509 ACKTHSRLDLA 519
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 105/216 (48%), Gaps = 41/216 (18%)
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I LS++G ++ A++ + + + + + N++++G G +E+ +L++EM +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFDEMSE--- 76
Query: 359 RNVISYNIFIKGLFENGKVEEAMNIWELL-----LGETALAV------------------ 395
RNV+S+N + G +N + EA N++EL+ + TA+
Sbjct: 77 RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 396 ---DSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAA 452
+ ++ ++ GL +G ++KA ++ + + DV A ++MI LC+E R+D+A
Sbjct: 137 PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEAR 192
Query: 453 GVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTLLFK 488
+ M +R N +I G+ +N+ + + K
Sbjct: 193 LIFDEMRER----NVVTWTTMITGYRQNNRVDVARK 224
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+++ Y +P EA LF +M V S+N L++ + + A F
Sbjct: 53 SIVSGYFSNGLPKEARQLFDEMSE-----RNVVSWNGLVSGYIKNRMIVEARNVFELMP- 106
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
NV ++ ++K ++ +A+ L M ++ S+ + G ++
Sbjct: 107 ---ERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDK 159
Query: 205 ALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMI 264
A +++D M + DV+ +I G + G +A RL+ +E NVV++ MI
Sbjct: 160 ARKLYDMMPVK----DVVASTNMIGGLCREGRVDEA-----RLIFDEMRERNVVTWTTMI 210
Query: 265 RGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVS 324
G + R + +++E M + +++S++ G + G ++ A+ ++ M +
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSGRIEDAEEFFEVM---PMK 263
Query: 325 PDVVTCNAMLNGLCKWGKVEES---FELWEEMGQSGSRNVI 362
P V+ CNAM+ G + G++ ++ F+L E+ + R +I
Sbjct: 264 P-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 183/435 (42%), Gaps = 56/435 (12%)
Query: 94 SMPDEALNLFRKMDRVFGCRPGVRSFNSLLN---AFAVSEQWER-AEKFFAYFD----TA 145
S PD L L + D G+R + L A V + E+ EK + + D +
Sbjct: 58 SKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDS 117
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
G+SP+ Y++++++L ++R ++ LR M G D+ +Y T+ +K A
Sbjct: 118 GLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADA 177
Query: 206 LEVFDEMSERGVEPDVMC--------------YNMIIDGFFKSGDFLKANEMWERLLREE 251
+ V ER ++ + M ++ ++ + + ++ R+L+E
Sbjct: 178 VAV-AHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKEL 236
Query: 252 TVFP---------------------NVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKH 290
P + V+YN +R L+R +E + + MK
Sbjct: 237 REHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDM 296
Query: 291 DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFEL- 349
D+ TY + + + ++Y+ M+ P + C+ +L L G +L
Sbjct: 297 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLS--GSPNPDLDLV 354
Query: 350 ------WEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGIL 403
+E G+S S+ V Y+ + L G+ +EA I + + D+ TY L
Sbjct: 355 FRVSRKYESTGKSLSKAV--YDGIHRSLTSVGRFDEAEEITKAMRN-AGYEPDNITYSQL 411
Query: 404 IHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGC 463
+ GLCK L +A VL++ E +G D+ ++ +I CK LD A + M ++G
Sbjct: 412 VFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Query: 464 KLNTHVCNPLIDGFI 478
+++++ + LIDGF+
Sbjct: 472 DIDSNLLDVLIDGFV 486
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 131 QWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYG 190
+++ AE+ AG P+ TY+ L+ LCK + E+A+G+L M G PD ++
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 191 TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLRE 250
LI K +L+ AL F M E+G + D +++IDGF F A+ +++
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 251 ETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHG-LSQMGNLD 309
V P +Y ++I L + + E+L++ + MKK Y+ G L++ G L+
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEAFDGYLAKFGTLE 560
Query: 310 GAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEES 346
A++ + D++ + SP ++ + G++ ++
Sbjct: 561 DAKK-FLDVLSSKDSPSFAAYFHVIEAFYREGRLTDA 596
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 168/385 (43%), Gaps = 18/385 (4%)
Query: 8 LSPHRLLNLLKS-EKNPHSALQLFQ---HATRHPGYTHSSAVLQHVLRRVASDPTLLPHA 63
LS + ++ +LK ++P AL F GY HS+ LR V + P +
Sbjct: 224 LSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALR-VLARPNSVAEF 282
Query: 64 PHIIGAIEAAQNCNCSEDVPLTLLKAYAKRSMPDEALNLFR-KMDRVFGCRPGVRSFNSL 122
++ ++ A + D + + + + K M E + L+ MD F +P ++ + L
Sbjct: 283 WSVVDEMKTA-GYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPF--KPSIQDCSLL 339
Query: 123 LNAFAVSEQWERAEKFFAY--FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGV 180
L + S + F +++ G S + Y+ + + L F++A+ + + M
Sbjct: 340 LRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNA 399
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G PD +Y L+ K L A V D+M +G PD+ + ++I G K+ + KA
Sbjct: 400 GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Query: 241 NEMWERLLREE-TVFPNVVSYNVMIRGLSRCGRFS-ESLEIWERMKKNERKHDVFTYSSL 298
+ +L + + N++ +V+I G +F S+ + E +K K TY L
Sbjct: 460 LACFANMLEKGFDIDSNLL--DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLL 517
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGS 358
I L ++ + A + + M+ ++ P A L K+G +E++ + + + S
Sbjct: 518 IDKLLKIKKSEEALDLLQ-MMKKQNYP--AYAEAFDGYLAKFGTLEDAKKFLDVLSSKDS 574
Query: 359 RNVISYNIFIKGLFENGKVEEAMNI 383
+ +Y I+ + G++ +A N+
Sbjct: 575 PSFAAYFHVIEAFYREGRLTDAKNL 599
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 185/401 (46%), Gaps = 28/401 (6%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L Y K +P+EA+ +F +M R G RP +F +++N + + + A F
Sbjct: 232 LFSGYVKAGLPEEAVLVFERM-RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-- 288
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
SP+V +NV+I K+ A M ++ + + G++++A +L+
Sbjct: 289 --SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
L V E + G+ ++ + ++ + K A +++E L + VF +N MIR
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-----WNAMIR 401
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G + G + +E++ MK + D FT++SL+ + +L+ + + +I ++++
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
++ NA+++ K G +E++ +++E M R+ +++N I ++ EA ++++
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCD---RDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 386 LL-----LGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMIN 440
+ + + A + +HGL Y K + L + G D D+ SS+I+
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGL----YQGKQVHCL--SVKCGLDRDLHTGSSLID 572
Query: 441 ALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNS 481
K + DA V S + + + N LI G+ +N+
Sbjct: 573 MYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQNN 609
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 174/410 (42%), Gaps = 61/410 (14%)
Query: 109 VFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFE 168
+ G R N++++ +A Q AEK F + + +V +N ++ +
Sbjct: 88 ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-----KDVTAWNSMLSMY---SSIG 139
Query: 169 KAKGLLRWMSGV---GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYN 225
K +LR + + P+KF++ +++ A+ ++ ++ M + G+E + C
Sbjct: 140 KPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGG 199
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
++D + K A ++E + V PN V + + G + G E++ ++ERM+
Sbjct: 200 ALVDMYAKCDRISDARRVFEWI-----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
+ D + ++I+ ++G L A+ ++ +M SPDVV N M++G K G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETV 310
Query: 346 SFELWEEMGQSGSRNV-------------------------------ISYNIFIKGLFEN 374
+ E + M +S ++ ++ NI++ +
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 375 -----GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGD 429
K+E A ++E L + + + +I G NG +K +++ + + G +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEK-----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 430 VDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIK 479
+D F ++S+++ L+ + S++ K+ N V N L+D + K
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 161/377 (42%), Gaps = 27/377 (7%)
Query: 57 PTLLPHAPHIIGAIEAAQ----NCNCSEDVPL----TLLKAYAKRSMPDEALNLFRKMDR 108
+ L H+ G + Q + C D L +L+ Y+K + + +
Sbjct: 533 ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK-------CGIIKDARK 585
Query: 109 VFGCRP--GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKRE 166
VF P V S N+L+ ++ E A F T GV+P+ T+ +++ K
Sbjct: 586 VFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 167 FEKAKGLLRWMSGVGLRPDKFSYG-TLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYN 225
++ G + G +L+ + A +F E+S ++ +
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS---PKSIVLWT 701
Query: 226 MIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKK 285
++ G ++G + +A + ++ + R + V P+ ++ ++R S E I +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEM-RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 286 NERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEE 345
D T ++LI ++ G++ G+ +V+ +M R +VV+ N+++NG K G E+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM---RRRSNVVSWNSLINGYAKNGYAED 817
Query: 346 SFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILI 404
+ ++++ M QS + I++ + GKV + I+E+++G+ + ++
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 405 HGLCKNGYLNKALQVLE 421
L + GYL +A +E
Sbjct: 878 DLLGRWGYLQEADDFIE 894
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 145/318 (45%), Gaps = 32/318 (10%)
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
+V + N LI + E+A L + M G+ P + ++ T++ A K L +
Sbjct: 594 SVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 210 DEMSERGV--EPDVMCYNMIIDGFFKSGDFLKANEMWER--LLREETVFPNVVSYNVMIR 265
++++RG E + + +++ G ++ + M E L E + ++V + M+
Sbjct: 653 GQITKRGFSSEGEYLGISLL-------GMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
G S+ G + E+L+ ++ M+ + D T+ +++ S + +L + ++ +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 326 DVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWE 385
D +T N +++ K G ++ S ++++EM + NV+S+N I G +NG E+A+ I++
Sbjct: 766 DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS--NVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 386 LLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA-YSSMINALCK 444
+ ++ + D T+ L VL H G D + MI
Sbjct: 824 SMR-QSHIMPDEITF----------------LGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 445 ERRLDDAAGVVSLMDKRG 462
E R+D A +V L+ + G
Sbjct: 867 EARVDHVACMVDLLGRWG 884
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 8/271 (2%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
TLL AYA+ + EAL LF M ++ G P V ++N ++ + + Q + A+ F +
Sbjct: 446 TLLAAYAESGLSGEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
+G+ PN+ ++ ++ + + E+A LR M GLRP+ FS ++A A L+
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 205 ALEVFDEMSERGVEPDVMCYNM-IIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+ + ++ ++D + K GD KA +++ L E N M
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS-----NAM 619
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRR- 322
I + G E++ ++ ++ K D T ++++ + G+++ A ++ D++ +R
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679
Query: 323 VSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
+ P + M++ L G+ E++ L EEM
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 120 NSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSG 179
SLLN + E AE F +V T+N++I ++ E A + + M
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 180 VGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLK 239
L+ D + TL++AAA+ +L EV E D++ + ++D + K G +
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 240 ANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLI 299
A ++++ TV +++ +N ++ + G E+L ++ M+ +V T++ +I
Sbjct: 429 AKKVFD-----STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 300 HGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSR 359
L + G +D A+ ++ M + P++++ M+NG+ + G EE+ +M +SG R
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/318 (18%), Positives = 152/318 (47%), Gaps = 9/318 (2%)
Query: 150 NVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVF 209
N +N L+ + + E+A L M G+ P + + T ++A+A G + +
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 210 DEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSR 269
G+E D + +++ + K G A +++R+ ++ VV++N++I G +
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD-----VVTWNLIISGYVQ 352
Query: 270 CGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVT 329
G +++ + + M+ + K+D T ++L+ ++ NL + V I D+V
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 330 CNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLG 389
+ +++ K G + ++ ++++ + +++I +N + E+G EA+ ++ +
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFD---STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 390 ETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRLD 449
E + + T+ ++I L +NG +++A + + + G ++ ++++M+N + + +
Sbjct: 470 E-GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 450 DAAGVVSLMDKRGCKLNT 467
+A + M + G + N
Sbjct: 529 EAILFLRKMQESGLRPNA 546
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 187 FSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWER 246
FS+ +I + G AL F EM E + PD N ++ K+ LK W R
Sbjct: 139 FSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD----NFVVPNVCKACGALK----WSR 190
Query: 247 LLR-----------EETVFP---------------------------NVVSYNVMIRGLS 268
R E+ VF N V++N ++ G
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 269 RCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVV 328
+ G+ E++ ++ M+K + T S+ + + MG ++ ++ + I + D +
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 329 TCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLL 388
++LN CK G +E + +++ M + ++V+++N+ I G + G VE+A+ + +L+
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFE---KDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 389 GETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINALCKERRL 448
E L D T L+ + L +V + D+ S++++ K +
Sbjct: 368 LEK-LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 449 DDAAGV 454
DA V
Sbjct: 427 VDAKKV 432
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 157/408 (38%), Gaps = 61/408 (14%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
FN++ N S + + K + D SP+ +Y + LCK E ++A L+ M
Sbjct: 6 FNTIPNKVPFSVSSKPSSK---HHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMD 62
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG----FFKS 234
LR YG ++ DL+ ++ + + G D N I+ F+
Sbjct: 63 FRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG---DFYARNEYIETKLVIFYAK 119
Query: 235 GDFLKANEMWERLLREETVFPNVVSYNVMIR-GLSRCGR--FSESLE------------- 278
D L+ E+ LR VF V R GL F E LE
Sbjct: 120 CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV 179
Query: 279 -------IWER--------MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRV 323
W R + K+ + VF SSL + G LD A +V+ ++ R
Sbjct: 180 CKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR-- 237
Query: 324 SPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSG---SRNVISYNIFIK---GLFENGKV 377
+ V NA++ G + GK EE+ L+ +M + G +R +S + G E GK
Sbjct: 238 --NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 378 EEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSS 437
A+ I + +D+ L++ CK G + A V + R + DV ++
Sbjct: 296 SHAIAIV------NGMELDNILGTSLLNFYCKVGLIEYAEMVFD----RMFEKDVVTWNL 345
Query: 438 MINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNLTL 485
+I+ ++ ++DA + LM K + L+ + NL L
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 164/346 (47%), Gaps = 14/346 (4%)
Query: 114 PGVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGL 173
P + FN L+ F+ + +A F+ + + P+ T+ LIK + +
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 174 LRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFK 233
+ G + D + +L++ A G + AA +F +M R DV+ + ++ G+ K
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTSMVAGYCK 195
Query: 234 SGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVF 293
G A EM++ + N+ ++++MI G ++ F ++++++E MK+ +
Sbjct: 196 CGMVENAREMFDEMPHR-----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 294 TYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
S+I + +G L+ +R Y+ ++ ++ +++ A+++ + G +E++ ++E +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 354 GQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYL 413
++ S +S++ IKGL +G +AM+ + ++ + D T+ ++ G +
Sbjct: 311 PETDS---LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD-VTFTAVLSACSHGGLV 366
Query: 414 NKALQVLEEAEH-RGGDVDVFAYSSMINALCKERRLDDAAGVVSLM 458
K L++ E + G + + Y +++ L + +L +A + M
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 100/229 (43%), Gaps = 8/229 (3%)
Query: 255 PNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRV 314
PN+ +N++IR S S++ + +M K+ D T+ LI S+M + ++
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 315 YKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFEN 374
+ ++ DV N++++ G + + ++ GQ G R+V+S+ + G +
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF---GQMGFRDVVSWTSMVAGYCKC 196
Query: 375 GKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFA 434
G VE A +++ + T+ I+I+G KN KA+ + E + G +
Sbjct: 197 GMVENAREMFDEMPHRNLF-----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 435 YSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKNSNL 483
S+I++ L+ + K +N + L+D F + ++
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 14/271 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
++ YAK + ++A++LF M R G S++++ A E E+ + Y +
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKRE-GVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 146 GVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAA 205
++ N+ L+ + + + EKA + + D S+ ++I A G + A
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP----ETDSLSWSSIIKGLAVHGHAHKA 334
Query: 206 LEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIR 265
+ F +M G P + + ++ G K E++E + ++ + P + Y ++
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 266 GLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSP 325
L R G+ +E+ +M K + +L+ N + A+RV +I +V P
Sbjct: 395 MLGRAGKLAEAENFILKM---HVKPNAPILGALLGACKIYKNTEVAERVGNMLI--KVKP 449
Query: 326 DVVTCNAMLNGL--C--KWGKVEESFELWEE 352
+ +L+ + C +W K+E ++ +E
Sbjct: 450 EHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 165/390 (42%), Gaps = 73/390 (18%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDT 144
+L+++Y ++ L LF M + P +F + A E A
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSL-SWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 145 AGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNA 204
G NV N L+ + + R A+ + MS D S+ ++I + AK G
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESYAKLGKPKV 211
Query: 205 ALEVFDEMS-ERGVEPD----------------------VMCY-------------NMII 228
ALE+F M+ E G PD + C+ N ++
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 229 DGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNER 288
D + K G +AN ++ + +VVS+N M+ G S+ GRF +++ ++E+M++ +
Sbjct: 272 DMYAKCGMMDEANTVFSNM-----SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 289 KHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFE 348
K DV T+S+ I G +Q G A V + M+ + P+ VT ++L+G G + E
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 349 LWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELL-------LGETALAV------ 395
+ I Y I ++ +NG +E M I +L+ +TA A+
Sbjct: 387 I--------HCYAIKYPIDLR---KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 396 ---DSTTYGILIHGLCKNGYLNKALQVLEE 422
D T+ ++I G ++G NKAL++L E
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSE 465
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 186/450 (41%), Gaps = 68/450 (15%)
Query: 23 PHSALQLFQHATRHPGYTHSSAVLQHVLRRVASDPT-LLPHAPHIIGAI-EAAQNC---N 77
P AL++F T G + L +VL AS T L H E QN N
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 78 CSEDVPLTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEK 137
C L+ YAK M DEA +F M V S+N+++ ++ ++E A +
Sbjct: 269 C-------LVDMYAKCGMMDEANTVFSNMSV-----KDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 138 FFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAA 197
F + +V T++ I ++ +A G+ R M G++P++ + ++++ A
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 198 KRGDL------------------------------------------NAALEVFDEMSER 215
G L + A +FD +S +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 216 GVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREET-VFPNVVSYNVMIRGLSRCGRFS 274
E DV+ + ++I G+ + GD KA E+ + E+ PN + + + +
Sbjct: 437 --ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 275 ESLEIWERMKKNERKH-DVFTYSSLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAM 333
+I +N++ +F + LI ++ G++ A+ V+ +M+ + + VT ++
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK----NEVTWTSL 550
Query: 334 LNGLCKWGKVEESFELWEEMGQSGSR-NVISYNIFIKGLFENGKVEEAMNIWELLLGETA 392
+ G G EE+ +++EM + G + + ++ + + +G +++ M + +
Sbjct: 551 MTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG 610
Query: 393 LAVDSTTYGILIHGLCKNGYLNKALQVLEE 422
++ Y L+ L + G LN AL+++EE
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 154/391 (39%), Gaps = 54/391 (13%)
Query: 85 TLLKAYAKRSMPDEALNLFRKMDRVFGCRP---------------GVRSFNSLLNAFAVS 129
+++++YAK P AL +F +M FGCRP G S L+ FAV+
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 130 EQWERAEKFF-------------------AYFDTAGVSPNVETYNVLIKVLCKKREFEKA 170
E + F F V +V ++N ++ + FE A
Sbjct: 258 S--EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDA 314
Query: 171 KGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDG 230
L M ++ D ++ I+ A+RG AL V +M G++P+ + ++ G
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 231 FFKSGDFLKANEM------WERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMK 284
G + E+ + LR+ + N +I ++C + + +++ +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 285 KNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR--RVSPDVVTCNAMLNGLCKWG- 341
ER DV T++ +I G SQ G+ + A + +M + P+ T + L
Sbjct: 435 PKER--DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 342 -KVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTY 400
++ + + Q + + N I + G + +A L+ + +A + T+
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR-----LVFDNMMAKNEVTW 547
Query: 401 GILIHGLCKNGYLNKALQVLEEAEHRGGDVD 431
L+ G +GY +AL + +E G +D
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 156/394 (39%), Gaps = 33/394 (8%)
Query: 87 LKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAY----- 141
+ YA+R + EAL + R+M G +P + S+L+ A ++ Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 142 --FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKR 199
G N LI + K ++ + A+ + +S D ++ +I ++
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQH 453
Query: 200 GDLNAALEVFDEMSERGVE--PDVMCYNMIIDGFFKSGDFLKANEMWERLLR-EETVFPN 256
GD N ALE+ EM E + P+ + + ++ LR ++ P
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 257 VVSYNVMIRGLSRCGRFSESLEIWER-MKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVY 315
VS N +I ++CG S++ +++ M KNE T++SL+ G G + A ++
Sbjct: 514 FVS-NCLIDMYAKCGSISDARLVFDNMMAKNE-----VTWTSLMTGYGMHGYGEEALGIF 567
Query: 316 KDMIGRRVS--PDVVTCNAMLNGLCKWGKVEESFELWEEMGQ--SGSRNVISYNIFIKGL 371
+M RR+ D VT +L G +++ E + M S Y + L
Sbjct: 568 DEM--RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 372 FENGKVEEAMNIWELLLGETALAVDSTTYGIL-IHGLCKNGYLNKALQVLEEAEHRGGDV 430
G++ A+ + E + E V IHG + G A ++ E A + G
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY-AAEKITELASNHDG-- 682
Query: 431 DVFAYSSMINALCKERRLDDAAGVVSLMDKRGCK 464
+Y+ + N R D + SLM +G K
Sbjct: 683 ---SYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 174/376 (46%), Gaps = 39/376 (10%)
Query: 101 NLFRKMDRVFGCRP--GVRSFNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLI 158
+L R +VF P V S +++ F + A + F G+ PN T+ +I
Sbjct: 41 DLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 159 KVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVE 218
R+ + K L + +GL + F ++N K L A FD+ +
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD---- 156
Query: 219 PDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLE 278
P+V+ +I G+ K +F +A ++ R + E +V V++N +I G S+ GR E++
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLF-RAMPERSV----VTWNAVIGGFSQTGRNEEAVN 211
Query: 279 IW-ERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYK---DMIGRRVSPDVVTCNAML 334
+ + +++ + T+ I +S + + + ++ +G+R +V N+++
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF--NVFVWNSLI 269
Query: 335 NGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAMNIWELLLGETALA 394
+ K G +E+S + ++ + RN++S+N I G NG+ EEA+ ++E ++ +T L
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEE-QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 395 VDSTTY-GILI----HGLCKNGYL--NKALQ-----VLEEAEHRGGDVDVFAYSSMINAL 442
++ T G+L GL + GY+ NKA+ L E EH Y+ M++ L
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEH---------YACMVDML 379
Query: 443 CKERRLDDAAGVVSLM 458
+ R +A ++ M
Sbjct: 380 SRSGRFKEAEELIKSM 395
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 118/256 (46%), Gaps = 15/256 (5%)
Query: 86 LLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFFAYFDTA 145
L+ Y K+ +EAL+LFR M V ++N+++ F+ + + E A F
Sbjct: 165 LISGYLKKHEFEEALSLFRAMP-----ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 146 GVS-PNVETYNVLIKVLCKKREFEKAKGLLRW-MSGVGLRPDKFSYGTLINAAAKRGDLN 203
GV PN T+ I + K + + +G R + F + +LI+ +K G++
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 204 AALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYNVM 263
+L F+++ E + +++ +N +I G+ +G +A M+E+++++ + PN V+ +
Sbjct: 280 DSLLAFNKLEEE--QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 264 IRGLSRCGRFSESLEIWERMKKNERKHDVFT---YSSLIHGLSQMGNLDGAQRVYKDMIG 320
+ + G E + + + ++ Y+ ++ LS+ G A+ + K M
Sbjct: 338 LFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM-- 395
Query: 321 RRVSPDVVTCNAMLNG 336
+ P + A+L G
Sbjct: 396 -PLDPGIGFWKALLGG 410
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 56/313 (17%)
Query: 181 GLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKA 240
G+ D +LI+ K G + +A +VFDEM ER +V +N +I G+ +GD + A
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNGDAVLA 131
Query: 241 NEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIH 300
+ ++E E +V N V++ MI+G + ++ E++ERM
Sbjct: 132 SGLFE----EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP---------------- 171
Query: 301 GLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRN 360
++ N+ + + M+G V+ K+E++ + +E++ + +N
Sbjct: 172 --FELKNV----KAWSVMLGVYVNNR---------------KMEDARKFFEDIPE---KN 207
Query: 361 VISYNIFIKGLFENGKVEEAMNIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVL 420
+++ + G F G V EA I+ A D + LI G +NGY + A+
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIF-----YRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 262
Query: 421 EEAEHRGGDVDVFAYSSMINALCKERRLDDAAGVVSLMDKRGCKLNTHVCNPLIDGFIKN 480
+ G + D SS+++A + RLD V SL++ RG +LN V N LID + K
Sbjct: 263 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 481 SNL---TLLFKSL 490
+L T +F+S+
Sbjct: 323 GDLENATSVFESI 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 35/297 (11%)
Query: 84 LTLLKAYAKRSMPDEALNLFRKMDRVFGCRPGVRSFNSLLNAFAVSEQWERAEKFF---- 139
+ ++K Y KR ++A LF +M V++++ +L + + + E A KFF
Sbjct: 148 IEMIKGYGKRIEIEKARELFERMPFEL---KNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 140 ------------AYFDTAGV-----------SPNVETYNVLIKVLCKKREFEKAKGLLRW 176
YF V + ++ +N LI + + A
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 177 MSGVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGD 236
M G G PD + ++++A A+ G L+ EV ++ RG+E + N +ID + K GD
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 237 FLKANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYS 296
A ++E + +V N MI L+ G+ E+LE++ M+ + K D T+
Sbjct: 325 LENATSVFESI-----SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 379
Query: 297 SLIHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCKWGKVEESFELWEEM 353
+++ G L +++ +M + V P+V +++ L + GK++E++ L +EM
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 149/317 (47%), Gaps = 15/317 (4%)
Query: 142 FDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMSGVGLRPDKFSYGTLINAAAKRGD 201
F+ V N T+ +IK K+ E EKA+ L M L+ K ++ ++
Sbjct: 135 FEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP-FELKNVK-AWSVMLGVYVNNRK 192
Query: 202 LNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFLKANEMWERLLREETVFPNVVSYN 261
+ A + F+++ E+ + +++++ G+F+ GD +A ++ R+ + V +N
Sbjct: 193 MEDARKFFEDIPEK----NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI-----WN 243
Query: 262 VMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSLIHGLSQMGNLDGAQRVYKDMIGR 321
+I G ++ G ++++ + M+ + D T SS++ +Q G LD + V+ + R
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 322 RVSPDVVTCNAMLNGLCKWGKVEESFELWEEMGQSGSRNVISYNIFIKGLFENGKVEEAM 381
+ + NA+++ K G +E + ++E + R+V N I L +GK +EA+
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESI---SVRSVACCNSMISCLAIHGKGKEAL 360
Query: 382 NIWELLLGETALAVDSTTYGILIHGLCKNGYLNKALQVLEEAEHRGGDVDVFAYSSMINA 441
++ + L D T+ ++ G+L + L++ E + + +V + +I+
Sbjct: 361 EMFS-TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 419
Query: 442 LCKERRLDDAAGVVSLM 458
L + +L +A +V M
Sbjct: 420 LGRSGKLKEAYRLVKEM 436
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 119 FNSLLNAFAVSEQWERAEKFFAYFDTAGVSPNVETYNVLIKVLCKKREFEKAKGLLRWMS 178
+N+L+ +A + + A F G P+ T + ++ + + + + ++
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 179 GVGLRPDKFSYGTLINAAAKRGDLNAALEVFDEMSERGVEPDVMCYNMIIDGFFKSGDFL 238
G+ ++F LI+ AK GDL A VF+ +S R V C N +I G
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR----SVACCNSMISCLAIHGKGK 357
Query: 239 KANEMWERLLREETVFPNVVSYNVMIRGLSRCGRFSESLEIWERMKKNERKHDVFTYSSL 298
+A EM+ + + P+ +++ ++ G E L+I+ MK + K +V + L
Sbjct: 358 EALEMFST-MESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCL 416
Query: 299 IHGLSQMGNLDGAQRVYKDMIGRRVSPDVVTCNAMLNGLCK 339
IH L + G L A R+ K+M V P+ A+L G CK
Sbjct: 417 IHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALL-GACK 453