Miyakogusa Predicted Gene
- Lj1g3v2292800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2292800.1 Non Chatacterized Hit- tr|C5Y452|C5Y452_SORBI
Putative uncharacterized protein Sb05g002330
OS=Sorghu,24.38,6e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; FAMILY NOT NAMED,NULL;
PPR_2,Pentatri,CUFF.29130.1
(274 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 462 e-130
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 151 5e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 1e-36
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 2e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 148 4e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 4e-35
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 7e-35
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 4e-34
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 4e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 6e-34
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 140 9e-34
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 2e-33
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 7e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 8e-33
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 9e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 1e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 1e-32
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 136 1e-32
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 135 2e-32
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 135 4e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 1e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 1e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 132 3e-31
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 132 3e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 4e-31
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 5e-31
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 7e-31
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 7e-31
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 9e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 130 1e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 130 1e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 2e-30
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 128 5e-30
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 1e-29
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 1e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 125 3e-29
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 5e-29
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 9e-29
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 122 2e-28
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 122 2e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 122 3e-28
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 122 3e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 4e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 5e-28
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 5e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 5e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 120 1e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 4e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 8e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 1e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 2e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 3e-26
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 6e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 6e-26
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 8e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 109 2e-24
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 8e-24
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 8e-24
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 105 3e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 6e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 104 8e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 9e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 102 2e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 102 2e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 101 5e-22
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 6e-22
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 8e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 92 3e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 8e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 91 1e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 9e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 87 1e-17
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 6e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 84 7e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 84 9e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 84 1e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 83 2e-16
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 8e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 79 4e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 5e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 77 1e-14
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 75 3e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 4e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 74 1e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 1e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 74 1e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 74 1e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 73 3e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 72 4e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 6e-13
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 6e-13
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 69 2e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 69 4e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 69 4e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 68 6e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 9e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 67 1e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 67 2e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 66 2e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 7e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 7e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 8e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 64 8e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 63 3e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 4e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 62 4e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 62 5e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 5e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 62 6e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 7e-10
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 60 2e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 2e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 2e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 59 2e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 59 2e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 59 4e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 59 5e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 54 9e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 53 2e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 52 4e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 5e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 214/274 (78%), Positives = 241/274 (87%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS GV+PDR FYNV+IDTFGKFNCLDHAM TF+RMLSE I PD VTWNTLIDCHCK G
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H AEE+F+ M+++G PC TYNIMINS G QE+WD + LL +M+SQG+LPN VT TT
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVDVYGKSGRFNDA+ECLE +KS+G KP+ TMYNALINAYAQRGLS+QAVNAFR MT++G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
LKPSLLALNSLINAFGEDRRD EAFAVLQYMKEN ++PDVVTYTTLMKALIRVDKF KVP
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
VYEEM+ SGC PDRKAR+MLRSALRYM+QTL++
Sbjct: 675 VVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 35/261 (13%)
Query: 28 HAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMI 87
A A FE + I+P T +N L+ + K G AE + EM+++G SP TY+++I
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 88 NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFK 147
++ +W+ +L M++ + PN+ F+ L+ + G + + L+ +KS+G K
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 148 PTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI--------------- 192
P YN +I+ + + D A+ F +M +EG++P + N+LI
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 193 --------------------NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
N++G+ R + +L MK + P+VVT+TTL+ +
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 233 VDKFHKVPAVYEEMVSSGCTP 253
+F+ EEM S G P
Sbjct: 562 SGRFNDAIECLEEMKSVGLKP 582
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 111/253 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ + ++ D N +I F K A+ + + T T ++I +G
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE LF+E++Q G P YN ++ +++ M+ +G+ P+ T++
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y +GR+ A L+ +++ +P +++ L+ + RG + ++M + G
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 439
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP N +I+ FG+ A M ++PD VT+ TL+ + +
Sbjct: 440 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Query: 241 AVYEEMVSSGCTP 253
++E M GC P
Sbjct: 500 EMFEAMERRGCLP 512
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 42/282 (14%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
Y+++I G+ L A +LS++ +T+N LI + ++A L +M
Sbjct: 169 LYSILIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVS------------------------------- 100
+Q GY + Y+++I S+ K D V
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 101 ------DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
LL Q+ GL T +++ SGR +A E L+ G KP YN
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
AL+ Y + G A + +M G+ P + LI+A+ R A VL+ M+
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
D+QP+ ++ L+ ++ K V +EM S G PDR+
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMAT--FERMLSEEIRPDTVTWNTLIDCHCKA 58
M+ +G Q D Y+++I + + N +D M ++ + +++ D N +I K+
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G +A +L Q G S T +I+++ + + L ++ G+ P +
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ Y K+G DA + ++ G P Y+ LI+AY G + A ++M A
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
++P+ + L+ F + + F VL+ MK ++PD Y ++ + +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 239 VPAVYEEMVSSGCTPDR 255
++ M+S G PDR
Sbjct: 463 AMTTFDRMLSEGIEPDR 479
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 134/265 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS+G+ PD + YN +I + + A FE M + D VT+N L+D + K+
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ++ EM G+SP ++TYN +I++ D+ +L +M +G P+ T+TT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + ++G+ A+ E +++ G KP +NA I Y RG + + F ++ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P ++ N+L+ FG++ D E V + MK P+ T+ TL+ A R F +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
VY M+ +G TPD + +AL
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAAL 534
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 1/265 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNC-LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
M+ +G +P YNV+++ FGK + + E+M S+ I PD T+NTLI C +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
H A ++F+EM+ G+S +TYN +++ G + + +L M G P+ VT+
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+ Y + G ++A+E + G KP Y L++ + + G + A++ F +M
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G KP++ N+ I +G + E + + L PD+VT+ TL+ + +V
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSA 264
V++EM +G P+R+ L SA
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISA 498
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G D+ YN ++D +GK + AM M+ P VT+N+LI + + G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A EL +M +KG P V TY +++ K + + M++ G PN TF
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ +YG G+F + ++ + + G P +N L+ + Q G+ + F++M G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P N+LI+A+ +A V + M + + PD+ TY T++ AL R + +
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 241 AVYEEMVSSGCTPD 254
V EM C P+
Sbjct: 545 KVLAEMEDGRCKPN 558
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 4/262 (1%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG P YN +I + + LD AM +M + +PD T+ TL+ +AG +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A +F+EM+ G P + T+N I G + K+ ++ + + GL P+ VT+ TL+
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
V+G++G ++ + +K GF P +N LI+AY++ G +QA+ +R+M G+ P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
L N+++ A ++ VL M++ +P+ +TY +L+ A + + ++
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 244 EEMVSSGCTPDRKARAMLRSAL 265
EE+ S P RA+L L
Sbjct: 583 EEVYSGVIEP----RAVLLKTL 600
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 35/290 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G P+R +N +I + + + AM + RML + PD T+NT++ + G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMG-----------AQEKWDQV---------- 99
+++E++ EM+ P LTY ++++ A+E + V
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 100 -------SDLL-------TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
DLL + ++ +G P+ T ++V +YG+ A L+ +K G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
F P+ YN+L+ +++ ++ R++ A+G+KP +++ N++I A+ + R +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ M+ + + PDV+TY T + + F + V M+ GC P++
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ PD +N ++ FG+ F+ M P+ T+NTLI + + G ++A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+++ M G +P + TYN ++ ++ W+Q +L M+ PN +T+ +L+
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y E + S +P + L+ ++ L +A AF ++ G P
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ LNS+++ +G + +A VL YMKE P + TY +LM R F K +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 245 EMVSSGCTPD 254
E+++ G PD
Sbjct: 689 EILAKGIKPD 698
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD Y ++ F + ++ AM+ FE M + +P+ T+N I + G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++F E+ G SP ++T+N ++ G +VS + M+ G +P TF T
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y + G F A+ + G P + YN ++ A A+ G+ +Q+ +M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP+ L SL++A+ + ++ + + ++P V TL+ + D +
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 241 AVYEEMVSSGCTPD 254
+ E+ G +PD
Sbjct: 615 RAFSELKERGFSPD 628
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
+I K G A +F +Q+ G+S V +Y +I++ ++ + ++ +M+ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 111 LLPNAVTFTTLVDVYGKSG-----------------------RFNDALEC---------- 137
P +T+ +++V+GK G +N + C
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 138 ---LEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
E +K+ GF YNAL++ Y + +A+ +M G PS++ NSLI+A
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ D EA + M E +PDV TYTTL+ R K +++EEM ++GC P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTF--GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA 58
M+ +P+ Y ++ + GK L H++A E + S I P V TL+ K
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA--EEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
AE F E++++G+SP + T N M++ G ++ + + +L M+ +G P+ T+
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+L+ ++ +S F + E L + + G KP YN +I AY + A F +M
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
G+ P ++ N+ I ++ D EA V++YM ++ +P+ TY +++ ++++
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 94/202 (46%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S ++P ++ K + L A F + PD T N+++ + +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+A + M+++G++P + TYN ++ + + ++L + ++G+ P+ +++ T++
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
Y ++ R DA +++ G P YN I +YA + ++A+ R M G +
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 183 PSLLALNSLINAFGEDRRDPEA 204
P+ NS+++ + + R EA
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEA 788
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 50 TLIDCHCKAGYHDRA-EELFQEMQQKGYSPC--VLTYNIMINSMGAQEKWD---QVSDLL 103
+LI+ + +G D ELF+ + K S +L + + +G +K+D + D
Sbjct: 105 SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAF---LKGLGFHKKFDLALRAFDWF 161
Query: 104 TRMQS-QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
+ + Q +L N+V ++ + GK GR + A L+ GF Y +LI+A+A
Sbjct: 162 MKQKDYQSMLDNSVV-AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDP--EAFAVLQYMKENDLQPDV 220
G +AVN F+KM +G KP+L+ N ++N FG+ P + ++++ MK + + PD
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK-MGTPWNKITSLVEKMKSDGIAPDA 279
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
TY TL+ R + V+EEM ++G + D+
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK 314
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G P YN ++ + + +L++ I+PD +++NT+I +C+
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F EM+ G P V+TYN I S A +++ ++ M G PN T+ +
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 121 LVDVYGKSGRFNDALECLEVLKSM 144
+VD Y K R ++A +E L+++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNL 798
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 135/254 (53%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y V+ID LD A FE+M + +PD VT+ TL+D
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ++ + EM++ G+ P V+T+ I+++++ + + D L M+ QG+LPN T+ T
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + R +DALE ++S+G KPT Y I+ Y + G S A+ F KM +G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++A N+ + + + RD EA + +K+ L PD VTY +MK +V + +
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 241 AVYEEMVSSGCTPD 254
+ EM+ +GC PD
Sbjct: 524 KLLSEMMENGCEPD 537
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 129/289 (44%), Gaps = 35/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ +PDR Y ++D F LD + M + PD VT+ L+D CKAG
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + M+ +G P + TYN +I + + D +L M+S G+ P A T+
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 121 LVDVYGKSGRFNDALECLEV-----------------------------------LKSMG 145
+D YGKSG ALE E LK +G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P YN ++ Y++ G D+A+ +M G +P ++ +NSLIN + R EA+
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ MKE L+P VVTY TL+ L + K + ++E MV GC P+
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 2/255 (0%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K GVQP YN++I + + ++ A F ++ S PD T+N L+D + K+G
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS-QGLLPNAVTFTT 120
D EL++EM +T+NI+I+ + D DL + S + P A T+
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D KSGR +A + E + G +P +YN LIN + + G +D A F++M EG
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P L + L++ R E + +KE+ L PDVV Y ++ L + + +
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 241 AVYEEMVSS-GCTPD 254
++ EM +S G TPD
Sbjct: 1017 VLFNEMKTSRGITPD 1031
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ P+ H YN +I + + LD A+ F M S ++P T+ ID + K+G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E F++M+ KG +P ++ N + S+ + + + ++ GL+P++VT+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y K G ++A++ L + G +P + N+LIN + D+A F +M
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
LKP+++ N+L+ G++ + EA + + M + P+ +T+ TL L + D+
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 241 AVYEEMVSSGCTPD 254
+ +M+ GC PD
Sbjct: 629 KMLFKMMDMGCVPD 642
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+KS G PD YN ++D +GK +D ++ M + E +T+T N +I KAG
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 61 HDRAEELFQE-MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D A +L+ + M + +SP TY +I+ + + + L M G PN +
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ +GK+G + A + + G +P Y+ L++ G D+ ++ F+++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHK 238
GL P ++ N +IN G+ R EA + MK + + PD+ TY +L+ L +
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 239 VPAVYEEMVSSGCTPD 254
+Y E+ +G P+
Sbjct: 1051 AGKIYNEIQRAGLEPN 1066
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P+ YN++I+ FGK D A A F+RM+ E +RPD T++ L+DC C G D
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ-SQGLLPNAVTFTTLVD 123
F+E+++ G +P V+ YN++IN +G + ++ L M+ S+G+ P+ T+ +L+
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
G +G +A + ++ G +P +NALI Y+ G + A ++ M G P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 184 S 184
+
Sbjct: 1101 N 1101
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S GV+P + Y V ID +GK A+ TFE+M ++ I P+ V N + KAG
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+++F ++ G P +TYN+M+ + D+ LL+ M G P+ + +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ K+ R ++A + +K M KPT YN L+ + G +A+ F M +G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+ + N+L + ++ A +L M + PDV TY T++ L++ + +
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 241 AVYEEM 246
+ +M
Sbjct: 664 CFFHQM 669
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G + + YN +I K AM + RM+ E RP T+++L+ K
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D L +EM+ G P V T+ I I +G K ++ ++L RM +G P+ VT+T
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + + + A E E +K+ KP Y L++ ++ D + +M +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ L++A + EAF L M++ + P++ TY TL+ L+RV +
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 241 AVYEEMVSSGCTP 253
++ M S G P
Sbjct: 419 ELFGNMESLGVKP 431
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M P Y +ID K L A FE ML RP+ +N LI+ KAG
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+ M ++G P + TY+++++ + + D+ ++ GL P+ V +
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 LVDVYGKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++ GKS R +AL +K S G P YN+LI G+ ++A + ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
GL+P++ N+LI + + A+AV Q M P+ TY L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ D + Y + + L A +M + ++N LI K+ +
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+++ M +G+ P + TY+ ++ +G + D V LL M++ GL PN TFT
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ V G++G+ N+A E L+ + G P Y LI+A D A F KM
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP + +L++ F ++R M+++ PDVVT+T L+ AL + F +
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 241 AVYEEMVSSGCTPD 254
+ M G P+
Sbjct: 384 DTLDVMRDQGILPN 397
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG +PD N +I+T K + +D A F RM +++P VT+NTL+ K G
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ELF+ M QKG P +T+N + + + ++ +L +M G +P+ T+ T
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL--------------- 165
++ K+G+ +A+ +K + + P L+ + L
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINA--FGEDR------RDPEAFAV---------- 207
+DQ N F E L S+LA + NA F E RD ++ V
Sbjct: 708 ADQPANLFW----EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 208 ---------LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ K+ +QP + TY L+ L+ D V+ ++ S+GC PD
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
T T N +++ G + +F MQ++ TY + S+ + Q L
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+M+ G + NA ++ L+ + KS +A+E + GF+P+ Y++L+ +R
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
D + ++M GLKP++ I G + EA+ +L+ M + PDVVTYT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
L+ AL K V+E+M + PDR
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N M++ L+ F+ M I+ DT T+ T+ G +A ++M++
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G+ +YN +I+ + + ++ RM +G P+ T+++L+ GK +
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
+ L+ ++++G KP + I + G ++A ++M EG P ++ LI+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
A R+ A V + MK +PD VTY TL+ V + EM G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 254 DRKARAMLRSAL 265
D +L AL
Sbjct: 362 DVVTFTILVDAL 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
T N M+ ++ K ++++ + MQ + + + T+ T+ G A L +
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
+ GF YN LI+ + +A+ +R+M EG +PSL +SL+ G+ R
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+L+ M+ L+P+V T+T ++ L R K ++ + + M GC PD +L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 262 RSALRYMRQ 270
AL R+
Sbjct: 300 IDALCTARK 308
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 132/263 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I+ F N ++ AM+ +M+ I+PD V + T+ID CK G+ + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
LF +M+ G P V+ Y ++N + +W LL M + + P+ +TF L+D
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K G+F DA E + M P Y +LIN + G D+A F M +G P
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++A SLIN F + ++ +A + M + L + +TYTTL++ +V K + V+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 245 EMVSSGCTPDRKARAMLRSALRY 267
MVS G P+ + +L L Y
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCY 399
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 126/242 (52%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++PD Y +ID+ K +++A++ F++M + IRPD V + +L++ C +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ L + M ++ P V+T+N +I++ + K+ +L M + PN T+T+L++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ G ++A + ++++ G P Y +LIN + + D A+ F +M+ +GL +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +LI FG+ + A V +M + P++ TY L+ L K K ++E
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 245 EM 246
+M
Sbjct: 412 DM 413
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++PD Y +++ A + M +I+PD +T+N LID K G
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEEL+ EM + +P + TY +IN + D+ + M+++G P+ V +T+
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K + +DA++ + G Y LI + Q G + A F M + G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ---PDVVTYTTLMKALIRVDKFH 237
+ P++ N L++ + + +A + + M++ ++ P++ TY L+ L K
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 238 KVPAVYEEM 246
K V+E+M
Sbjct: 443 KALMVFEDM 451
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+ D T N L++C C++ A +M + G+ P ++T+ +IN + ++
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
++ +M G+ P+ V +TT++D K+G N AL + +++ G +P MY +L+N
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
G A + R MT +KP ++ N+LI+AF ++ + +A + M + P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
TYT+L+ + ++ M + GC PD A L
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV D + N++++ F + + A + +M+ PD VT+ +LI+ C + A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ +M + G P V+ Y +I+S+ + L +M++ G+ P+ V +T+LV+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
SGR+ DA L + KP +NALI+A+ + G A + +M + P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ SLIN F + EA + M+ PDVV YT+L+ + K ++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 245 EMVSSGCTPD 254
EM G T +
Sbjct: 342 EMSQKGLTGN 351
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 38/290 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++PD +N +ID F K A + M+ I P+ T+ +LI+ C G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++F M+ KG P V+ Y +IN +K D + M +GL N +T+TT
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA-- 178
L+ +G+ G+ N A E + S G P YN L++ G +A+ F M
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 179 -EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL--------------------- 216
+G+ P++ N L++ + + +A V + M++ ++
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 217 --------------QPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+P+VVTYTT++ L R H+ ++ +M G +
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+ A+ F M+ P + + L++ K D L +Q G S + T N+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++N + S L +M G P+ VTFT+L++ + R +A+ + + MG
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
KP MY +I++ + G + A++ F +M G++P ++ SL+N R +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++L+ M + ++PDV+T+ L+ A ++ KF +Y EM+ P+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
++++ DL T M LP+ + FT L++V K +F+ + + L+ MG N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
L+N + Q A + KM G +P ++ SLIN F R EA +++ M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++PDVV YTT++ +L + + +++++M + G PD
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 128/248 (51%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V PD YN ++ + L AM +RML + PD +T+ LI+ C+ A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+L EM+ +G +P V+TYN+++N + + + D+ L M S G PN +T ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+GR+ DA + L + GF P+ +N LIN ++GL +A++ KM G +P+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
L+ N L++ F ++++ A L+ M PD+VTY T++ AL + K + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 246 MVSSGCTP 253
+ S GC+P
Sbjct: 440 LSSKGCSP 447
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 137/271 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G PD YNV+++ K LD A+ M S +P+ +T N ++ C G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L +M +KG+SP V+T+NI+IN + + + D+L +M G PN++++
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K + + A+E LE + S G P YN ++ A + G + AV +++++G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L+ N++I+ + + +A +L M+ DL+PD +TY++L+ L R K +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQT 271
+ E G P+ + L RQT
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y ++I+ + + + HAM + M PD VT+N L++ CK G D A +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+M G P V+T+NI++ SM + +W LL M +G P+ VTF L++ +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
G A++ LE + G +P YN L++ + + D+A+ +M + G P ++
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N+++ A +D + +A +L + P ++TY T++ L + K K + +EM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 248 SSGCTPD 254
+ PD
Sbjct: 477 AKDLKPD 483
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 119/230 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P +N++I+ + L A+ E+M +P+++++N L+ CK
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
DRA E + M +G P ++TYN M+ ++ K + ++L ++ S+G P +T+ T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D K+G+ A++ L+ +++ KP Y++L+ ++ G D+A+ F + G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
++P+ + NS++ + R+ A L +M +P+ +YT L++ L
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G QP+ YN ++ F K +D A+ ERM+S PD VT+NT++ CK G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A E+ ++ KG SP ++TYN +I+ + K + LL M+++ L P+ +T+++
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV + G+ ++A++ + MG +P +N+++ + +D+A++ M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
KP+ + LI + EA +L +
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD +I F + A E + PD +T+N +I +CKAG
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + M SP V+TYN ++ S+ K Q ++L RM + P+ +T+T
Sbjct: 188 INNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + A++ L+ ++ G P YN L+N + G D+A+ M + G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P+++ N ++ + R +A +L M P VVT+ L+ L R +
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 241 AVYEEMVSSGCTPD 254
+ E+M GC P+
Sbjct: 365 DILEKMPQHGCQPN 378
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
L M G +P+ + TTL+ + + G+ A + LE+L+ G P YN +I+ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 162 QRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVV 221
+ G + A++ +M+ + P ++ N+++ + + + +A VL M + D PDV+
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 222 TYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
TYT L++A R + +EM GCTPD
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
+ G + + + M G P ++ +I K + + +L ++ G +P+ +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ ++ Y K+G N+A L VL M P YN ++ + G QA+ +M
Sbjct: 174 TYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
P ++ LI A D A +L M++ PDVVTY L+ + + +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 237 HKVPAVYEEMVSSGCTPD 254
+ +M SSGC P+
Sbjct: 291 DEAIKFLNDMPSSGCQPN 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ ++PD Y+ ++ + +D A+ F IRP+ VT+N+++ CK+
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
DRA + M +G P +Y I+I + + + +LL + ++GL+ +
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 146/306 (47%), Gaps = 35/306 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + V P+ YN++I F +D A+ F++M ++ P+ VT+NTLID +CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG---------- 110
D +L + M KG P +++YN++IN + + + +VS +LT M +G
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 111 -------------------------LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
L P+ +T+T+L+ K+G N A+E L+ ++ G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P Y L++ ++Q+G ++A R+M G PS++ N+LIN + +A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
AVL+ MKE L PDVV+Y+T++ R + V EMV G PD + L
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 266 RYMRQT 271
R+T
Sbjct: 496 CEQRRT 501
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 144/310 (46%), Gaps = 43/310 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRP----DTVTWNTLIDCHC 56
M G++P+ YNV+I+ C + M +L+E R D VT+NTLI +C
Sbjct: 266 MALKGLEPNLISYNVVINGL----CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
K G +A + EM + G +P V+TY +I+SM ++ + L +M+ +GL PN
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA--------------- 161
T+TTLVD + + G N+A L + GF P+ YNALIN +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 162 -QRGLS-------------------DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
++GLS D+A+ R+M +G+KP + +SLI F E RR
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
EA + + M L PD TYT L+ A K ++ EMV G PD ++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 262 RSALRYMRQT 271
+ L +T
Sbjct: 562 INGLNKQSRT 571
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ P+ Y ++D F + ++ A M P VT+N LI+ HC G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + ++M++KG SP V++Y+ +++ D+ + M +G+ P+ +T+++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + R +A + E + +G P Y ALINAY G ++A+ +M +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMK 228
+ P ++ + LIN + R EA +L + + P VTY TL++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH-DRAEELFQEM 71
+++++ ++ + + +D A++ + P +++N ++D ++ + AE +F+EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ SP V TYNI+I D L +M+++G LPN VT+ TL+D Y K +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+D + L + G +P YN +IN + G + +M G + N+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
I + ++ +A + M + L P V+TYT+L+ ++ + ++ ++M G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 252 TPDRKARAML 261
P+ + L
Sbjct: 377 CPNERTYTTL 386
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
+I F + A FE ML + +PD +N +I HC+AG +A L++EM + G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ +T ++ ++ + K ++++ ++ + L A LV++ + G + L
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 136 ECLEVLKSMGFKP 148
+ L + GF P
Sbjct: 731 DVLAEMAKDGFLP 743
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 20/250 (8%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ PD Y +I+ + L+ A+ M+ + + PD VT++ LI+ K A
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ L ++ + P +TY+ +I + E VS L+
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS--------------------LIKG 614
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ G +A + E + KP T YN +I+ + + G +A +++M G
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ + +L+ A ++ + E +V+ ++ + + L++ R V V
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 245 EMVSSGCTPD 254
EM G P+
Sbjct: 735 EMAKDGFLPN 744
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ Y V+++ K D A+ +M + +I D V +NT+ID CK +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+EM+ KG P V+TY+ +I+ + + +W S LL+ M + + PN VTF
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+F +A + + + P YN+L+N + D+A F M ++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N+LI F + +R + + + M L D VTYTTL++ L
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+++MVS G PD ++L L
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD YN +++ F + LD A FE M+S++ PD VT+NTLI CK+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF+EM +G +TY +I + D + +M S G+ P+ +T++
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ ALE + ++ K +Y +I + G D + F ++ +G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+KP+++ N++I+ R EA+A+L+ MKE+ P+ TY TL++A +R
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A +RM+ +P+ VT+ +++ CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M+ V+ +N +I+S+ D +L M+++G+ PN VT+++L+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA + L + P +NALI+A+ + G +A + M + P
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ NSL+N F R +A + ++M D PDVVTY TL+K + + ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 245 EMVSSGCTPD 254
EM G D
Sbjct: 425 EMSHRGLVGD 434
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++P+ Y+ +I + A M+ ++I P+ VT+N LID K G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ +M ++ P + TYN ++N ++ D+ + M S+ P+ VT+ T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + KS R D E + G Y LI G D A F++M ++G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ + L++ + + +A V YM++++++ D+ YTT+++ + + K
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 241 AVYEEMVSSGCTPD 254
++ + G P+
Sbjct: 526 DLFCSLSLKGVKPN 539
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 126/242 (52%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN++I+ F + + + A+A +M+ P VT ++L++ +C A L +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P +T+ +I+ + K + L+ RM +G PN VT+ +V+ K G +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
AL L +++ + ++N +I++ + D A+N F++M +G++P+++ +SLI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ R +A +L M E + P++VT+ L+ A ++ KF + +Y++M+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 253 PD 254
PD
Sbjct: 363 PD 364
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE---LFQEMQQKGYSPCVLT 82
+ A+A ++M+ RPDT+T+ TLI H++A E L M Q+G P ++T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIH---GLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 83 YNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK 142
Y +++N + + D +LL +M++ + + V F T++D K +DAL + ++
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 143 SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDP 202
+ G +P Y++LI+ G A M + + P+L+ N+LI+AF ++ +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 203 EAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
EA + M + + PD+ TY +L+ D+ K ++E MVS C PD
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 118/242 (48%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ K D ++ E+M EI T+N LI+C C+ A L +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T + ++N ++ L+ +M G P+ +TFTTL+ + +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + G +P Y ++N +RG +D A+N KM A ++ ++ N++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + R +A + + M+ ++P+VVTY++L+ L ++ + +M+
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 253 PD 254
P+
Sbjct: 328 PN 329
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P V +N L+ K D L ++MQ+ + TYNI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + LL +M G P+ VT ++L++ Y R +DA+ ++ + MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P + LI+ + +AV +M G +P+L+ ++N + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+L M+ ++ DVV + T++ +L + +++EM + G P+ + L S L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S PD YN +I F K ++ F M + DTVT+ TLI G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+++F++M G P ++TY+I+++ + K ++ ++ MQ + + +TT
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ K+G+ +D + L G KP YN +I+ + L +A +KM +G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
P+ N+LI A D + +++ M+ D T
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D L M LP+ V F L+ K +F+ + E ++ + YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LIN + +R A+ KM G +PS++ L+SL+N + +R +A A++ M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+PD +T+TTL+ L +K + A+ + MV GC P+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 132/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ Y V+++ K +D A +M + +I D V +NT+ID CK +
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+EM+ KG P V+TY+ +I+ + + +W S LL+ M + + PN VTF
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+F +A + + + P YN+LIN + D+A F M ++
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L N+LI F + +R + + + M L D VTYTTL++ L
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+++MVS G PD ++L L
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 120/232 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD YN +I+ F + LD A FE M+S++ PD T+NTLI CK+
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF+EM +G +TY +I + D + +M S G+ P+ +T++
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ ALE + ++ K +Y +I + G D + F ++ +G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+KP+++ N++I+ R EA+A+L+ MKE+ PD TY TL++A +R
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A +RM+ +P+ VT+ +++ CK G D A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M+ V+ +N +I+S+ D +L M+++G+ PN VT+++L+
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA + L + P +NALI+A+ + G +A M + P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ NSLIN F R +A + ++M D PD+ TY TL+K + + ++
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 245 EMVSSGCTPD 254
EM G D
Sbjct: 350 EMSHRGLVGD 359
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 131/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + + YN++I+ F + + + A+A +M+ P VT ++L++ +C
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P +T+ +I+ + K + L+ RM +G PN VT+
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + A L +++ + ++N +I++ + D A+N F++M +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ +SLI+ R +A +L M E + P++VT+ L+ A ++ KF +
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 241 AVYEEMVSSGCTPD 254
++++M+ PD
Sbjct: 276 KLHDDMIKRSIDPD 289
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++P+ Y+ +I + A M+ ++I P+ VT+N LID K G
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L +M ++ P + TYN +IN ++ D+ + M S+ P+ T+ T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + KS R D E + G Y LI G D A F++M ++G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ + L++ + + +A V YM++++++ D+ YTT+++ + + K
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 241 AVYEEMVSSGCTPD 254
++ + G P+
Sbjct: 451 DLFCSLSLKGVKPN 464
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ ++ D +N +ID+ K+ +D A+ F+ M ++ IRP+ VT+++LI C C G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L +M +K +P ++T+N +I++ + K+ + L M + + P+ T+ +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R + A + E + S P YN LI + + + FR+M+ G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + +LI D A V + M + + PD++TY+ L+ L K K
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 241 AVYEEMVSS 249
V++ M S
Sbjct: 416 EVFDYMQKS 424
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 117/247 (47%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P +N ++ K D ++ E+M I + T+N LI+C C+ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+M + GY P ++T + ++N ++ L+ +M G P+ +TFTTL+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ ++A+ ++ + G +P Y ++N +RG D A N KM A ++ ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N++I++ + R +A + + M+ ++P+VVTY++L+ L ++ + +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 248 SSGCTPD 254
P+
Sbjct: 248 EKKINPN 254
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDL 102
P +N L+ K D L ++MQ+ G S + TYNI+IN + + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 103 LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
L +M G P+ VT ++L++ Y R +DA+ ++ + MG++P + LI+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
+ +AV +M G +P+L+ ++N + AF +L M+ ++ DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ T++ +L + +++EM + G P+ + L S L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S PD YN +I F K ++ F M + DTVT+ TLI G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+++F++M G P ++TY+I+++ + K ++ ++ MQ + + +TT
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ K+G+ +D + L G KP YN +I+ + L +A +KM +G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
P N+LI A RD + A + ++E
Sbjct: 496 PLPDSGTYNTLIRAH---LRDGDKAASAELIRE 525
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+GV PD Y++++D L+ A+ F+ M EI+ D + T+I+ CKAG
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +LF + KG P V+TYN MI+ + ++ + LL +M+ G LP++ T+ T
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF 146
L+ + + G + E + ++S F
Sbjct: 506 LIRAHLRDGDKAASAELIREMRSCRF 531
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 1 MKSNGVQPDRHFYNVMID-TFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
M G+ D Y +I F +C D+A F++M+S+ + PD +T++ L+D C G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
++A E+F MQ+ + Y MI M K D DL + +G+ PN VT+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T++ +A L+ +K G P YN LI A+ + G + R+M
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 133/254 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ NGVQPDR +N ++ + + A F+ M + I D ++NTL+D CK G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E+ +M K P V++Y+ +I+ ++D+ +L M+ G+ + V++ T
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +Y K GR +AL+ L + S+G K YNAL+ Y ++G D+ F +M E
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+LL ++LI+ + + EA + + K L+ DVV Y+ L+ AL +
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 241 AVYEEMVSSGCTPD 254
++ +EM G +P+
Sbjct: 570 SLIDEMTKEGISPN 583
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 110/191 (57%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ Y+ +ID F K D A+ F M I D V++NTL+ + K G + A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++ +EM G V+TYN ++ G Q K+D+V + T M+ + +LPN +T++TL+D Y
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
K G + +A+E KS G + +Y+ALI+A + GL AV+ +MT EG+ P++
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 186 LALNSLINAFG 196
+ NS+I+AFG
Sbjct: 585 VTYNSIIDAFG 595
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 142/266 (53%), Gaps = 5/266 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNC-LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
MK G++P+ YN +ID GK F+ M ++PD +T+N+L+ + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ A LF EM + V +YN +++++ + D ++L +M + ++PN V+++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
T++D + K+GRF++AL ++ +G YN L++ Y + G S++A++ R+M +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+K ++ N+L+ +G+ + E V MK + P+++TY+TL+ + + +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
++ E S+G +A +L SAL
Sbjct: 534 MEIFREFKSAGL----RADVVLYSAL 555
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
+ MI T G++ + A FE + ++ LI + ++G H+ A +F M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 74 KGYSPCVLTYNIMINSMG-AQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG--- 129
G P ++TYN +I++ G ++ QV+ MQ G+ P+ +TF +L+ V + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 130 -------------------RFNDALECL----------EVLKSMGFK---PTPTMYNALI 157
+N L+ + E+L M K P Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
+ +A+ G D+A+N F +M G+ ++ N+L++ + + R EA +L+ M ++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
DVVTY L+ + K+ +V V+ EM P+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ DR YN ++ + K + A+ M S I+ D VT+N L+ + K G
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D +++F EM+++ P +LTY+ +I+ + + ++ +S GL + V ++
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+G A+ ++ + G P YN++I+A+ + D++ + +
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 181 LKPSLLAL-----NSLINAFGE--------DRRDPEA--------FAVLQYMKENDLQPD 219
+L AL N +I FG+ +D E V + M + +++P+
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPN 674
Query: 220 VVTYTTLMKALIRVDKFHKVPAVYEEM 246
VVT++ ++ A R + F + EE+
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
R QG L +A ++ G+ G+ A E + G+ T ++ALI+AY + G
Sbjct: 228 RKNEQGKLASA-----MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG 282
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA-VLQYMKENDLQPDVVTY 223
L ++A++ F M GL+P+L+ N++I+A G+ + + A M+ N +QPD +T+
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVS 248
+L+ R + +++EM +
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTN 367
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 137/272 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G QP+ YN +I ++G+ N L+ AM F +M +PD VT+ TLID H KAG+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +++Q MQ G SP TY+++IN +G L M QG PN VT+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D++ K+ + +AL+ +++ GF+P Y+ ++ G ++A F +M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L++ +G+ +A+ Q M L+P+V T +L+ +RV+K +
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTL 272
+ + M++ G P + +L S R L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D T+ T++ +A +L EM + G P +TYN +I+S G ++ ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+MQ G P+ VT+ TL+D++ K+G + A++ + +++ G P Y+ +IN +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G A F +M +G P+L+ N +++ + R A + + M+ +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ +M+ L + AV+ EM PD +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+Q G+ TY M+ ++G +++ ++ LL M G PN VT+ L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
N+A+ ++ G KP Y LI+ +A+ G D A++ +++M A GL P + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
IN G+ P A + M + P++VTY +M + + +Y +M ++G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 252 TPDRKARAMLRSALRY 267
PD+ +++ L +
Sbjct: 536 EPDKVTYSIVMEVLGH 551
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 137/272 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G QP+ YN +I ++G+ N L+ AM F +M +PD VT+ TLID H KAG+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +++Q MQ G SP TY+++IN +G L M QG PN VT+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D++ K+ + +AL+ +++ GF+P Y+ ++ G ++A F +M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L++ +G+ +A+ Q M L+P+V T +L+ +RV+K +
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTL 272
+ + M++ G P + +L S R L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D T+ T++ +A +L EM + G P +TYN +I+S G ++ ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+MQ G P+ VT+ TL+D++ K+G + A++ + +++ G P Y+ +IN +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G A F +M +G P+L+ N +++ + R A + + M+ +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ +M+ L + AV+ EM PD +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+Q G+ TY M+ ++G +++ ++ LL M G PN VT+ L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
N+A+ ++ G KP Y LI+ +A+ G D A++ +++M A GL P + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
IN G+ P A + M + P++VTY +M + + +Y +M ++G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 252 TPDRKARAMLRSALRY 267
PD+ +++ L +
Sbjct: 536 EPDKVTYSIVMEVLGH 551
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 137/272 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G QP+ YN +I ++G+ N L+ AM F +M +PD VT+ TLID H KAG+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +++Q MQ G SP TY+++IN +G L M QG PN VT+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D++ K+ + +AL+ +++ GF+P Y+ ++ G ++A F +M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L++ +G+ +A+ Q M L+P+V T +L+ +RV+K +
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTL 272
+ + M++ G P + +L S R L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D T+ T++ +A +L EM + G P +TYN +I+S G ++ ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+MQ G P+ VT+ TL+D++ K+G + A++ + +++ G P Y+ +IN +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G A F +M +G P+L+ N +++ + R A + + M+ +PD VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ +M+ L + AV+ EM PD +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+Q G+ TY M+ ++G +++ ++ LL M G PN VT+ L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
N+A+ ++ G KP Y LI+ +A+ G D A++ +++M A GL P + +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
IN G+ P A + M + P++VTY +M + + +Y +M ++G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 252 TPDRKARAMLRSALRY 267
PD+ +++ L +
Sbjct: 536 EPDKVTYSIVMEVLGH 551
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y ++++ K +D A++ ++M +I P V +NT+ID C
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A LF EM KG P V+TYN +I + +W S LL+ M + + PN VTF+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P Y++LIN + D+A + F M ++
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ N+LI F + +R E + + M + L + VTYTTL+ + +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+++MVS G PD ++L L
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGL 476
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 124/246 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G QPD +N +I + N A+A +RM+ + +PD VT+ +++ CK G D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L ++M+Q P V+ YN +I+++ + + +L T M ++G+ PN VT+ +L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA L + P ++ALI+A+ + G +A + +M + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +SLIN F R EA + + M D P+VVTY TL+K + + + ++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 245 EMVSSG 250
EM G
Sbjct: 421 EMSQRG 426
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 120/232 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD Y+ +I+ F + LD A FE M+S++ P+ VT+NTLI CKA
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ELF+EM Q+G +TY +I+ + D + +M S G+LP+ +T++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ AL E L+ +P YN +I + G + + F ++ +G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+KP+++ ++++ F EA A+ + MKE PD TY TL++A +R
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ + + Y+++I+ F + + L A+A +M+ PD VT N+L++ C
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P T+N +I+ + + + L+ RM +G P+ VT+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + AL L+ ++ +P +YN +I+A + A+N F +M +G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ NSLI R +A +L M E + P+VVT++ L+ A ++ K +
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 241 AVYEEMVSSGCTPD 254
+Y+EM+ PD
Sbjct: 347 KLYDEMIKRSIDPD 360
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 2/273 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++P+ YN +I + A M+ +I P+ VT++ LID K G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ EM ++ P + TY+ +IN ++ D+ + M S+ PN VT+ T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+ R ++ +E + G Y LI+ + Q D A F++M ++G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ + L++ + + A V +Y++ + ++PD+ TY +++ + + K
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTLK 273
++ + G P+ + S + R+ LK
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSG--FCRKGLK 552
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++P YN +ID + ++ A+ F M ++ IRP+ VT+N+LI C C G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M ++ +P V+T++ +I++ + K + L M + + P+ T+++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R ++A E++ S P YN LI + + D+ + FR+M+ G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + +LI+ F + R A V + M + + PD++TY+ L+ L K
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 241 AVYEEMVSSGCTPD 254
V+E + S PD
Sbjct: 487 VVFEYLQRSKMEPD 500
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD N +++ F N + A++ +M+ +PD+ T+NTLI + H+RA
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR---HNRA 202
Query: 65 EE---LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
E L M KG P ++TY I++N + + D LL +M+ + P V + T+
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D NDAL + + G +P YN+LI G A M +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+++ ++LI+AF ++ + EA + M + + PD+ TY++L+ D+ +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 242 VYEEMVSSGCTPD 254
++E M+S C P+
Sbjct: 383 MFELMISKDCFPN 395
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 116/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K N D ++ E+M + I + T++ LI+C C+ A + +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T N ++N + L+ +M G P++ TF TL+ + R +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + G +P Y ++N +RG D A++ +KM ++P ++ N++I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+A + +A + M ++P+VVTY +L++ L ++ + +M+
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 253 PD 254
P+
Sbjct: 324 PN 325
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P V ++ L+ K D L ++MQ G S + TY+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + +L +M G P+ VT +L++ + R +DA+ + + MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P +N LI+ + + +AV +M +G +P L+ ++N + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA-RAMLRSA 264
++L+ M++ ++P VV Y T++ AL + ++ EM + G P+ +++R
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 265 LRYMRQT 271
Y R +
Sbjct: 302 CNYGRWS 308
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + Y +I F + D+A F++M+S+ + PD +T++ L+D C G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +F+ +Q+ P + TYNIMI M K + DL + +G+ PN VT+TT
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++ + + G +A +K G P YN LI A+ + G + R+M
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D +L M P+ V F+ L+ K +F+ + E ++++G Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LIN + +R A+ KM G +P ++ LNSL+N F R +A +++ M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
QPD T+ TL+ L R ++ + A+ + MV GC PD
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 129/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD ++ +ID F K L A + M++ I PDT+T+N+LID CK
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ++F M KG P ++TY+I+INS ++ D L + S+GL+PN +T+ T
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV + +SG+ N A E + + S G P+ Y L++ G ++A+ F KM
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + N +I+ + +A+++ + + ++PDVVTY ++ L + +
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 241 AVYEEMVSSGCTPD 254
++ +M GCTPD
Sbjct: 546 MLFRKMKEDGCTPD 559
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y +++ K A+ F +M I+ V ++ +ID CK G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM+ KG V+TY+ +I + KWD + +L M + ++P+ VTF+
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+DV+ K G+ +A E + + G P YN+LI+ + + +A F M ++G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P ++ + LIN++ + +R + + + + L P+ +TY TL+ + K +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EMVS G P +L L
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 126/261 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ PD YN +ID F K NCL A F+ M+S+ PD VT++ LI+ +CKA
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D LF+E+ KG P +TYN ++ K + +L M S+G+ P+ VT+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G N ALE E ++ +YN +I+ D A + F ++ +G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP ++ N +I + EA + + MKE+ PD TY L++A +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+ EEM G + D M+
Sbjct: 581 ELIEEMKVCGFSADSSTIKMV 601
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 126/237 (53%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y+++ID+ K D A++ F M + I+ D VT+++LI C G D ++ +EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ P V+T++ +I+ + K + +L M ++G+ P+ +T+ +L+D + K +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A + +++ S G +P Y+ LIN+Y + D + FR+++++GL P+ + N+L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
F + + A + Q M + P VVTY L+ L + +K ++E+M S
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD ++ +++ F + A+A +RM+ + RPD VT +TLI+ C G A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L M + G+ P +TY ++N + DL +M+ + + + V ++ ++D
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K G F+DAL ++ G K Y++LI G D R+M + P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ ++LI+ F ++ + EA + M + PD +TY +L+ + + H+ +++
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 245 EMVSSGCTPDRKARAML 261
MVS GC PD ++L
Sbjct: 375 LMVSKGCEPDIVTYSIL 391
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ NG++ D + +MI+ + + L A + R PDT+T++TL++ C G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L M + P ++T + +IN + + + + L+ RM G P+ VT+
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ KSG AL+ ++ K + Y+ +I++ + G D A++ F +M +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+K ++ +SLI D + + +L+ M ++ PDVVT++ L+ ++ K +
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 241 AVYEEMVSSGCTPD 254
+Y EM++ G PD
Sbjct: 336 ELYNEMITRGIAPD 349
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 123/248 (49%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD + +I+ + A+ +RM+ +PD VT+ +++ CK+G A +
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
LF++M+++ V+ Y+I+I+S+ +D L M+ +G+ + VT+++L+
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
G+++D + L + P ++ALI+ + + G +A + +M G+ P +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
NSLI+ F ++ EA + M +PD+VTY+ L+ + + + ++ E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 247 VSSGCTPD 254
S G P+
Sbjct: 412 SSKGLIPN 419
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+ S G+ P+ YN ++ F + L+ A F+ M+S + P VT+ L+D C G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A E+F++MQ+ + + YNI+I+ M K D L + +G+ P+ VT+
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G ++A +K G P YN LI A+ +V +M G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 181 LKPSLLALNSLINAFGEDRRDPEAF 205
+ +I+ DRR ++F
Sbjct: 591 FSADSSTIKMVIDML-SDRRLDKSF 614
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
++ A+ FE M+ P + +N L + +D + M+ G + T I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM- 144
MIN ++K +L R G P+ +TF+TLV+ + GR ++A+ ++ + M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 145 ----------------------------------GFKPTPTMYNALINAYAQRGLSDQAV 170
GF+P Y ++N + G S A+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 171 NAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ FRKM +K S++ + +I++ +D +A ++ M+ ++ DVVTY++L+ L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPD 254
K+ + EM+ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPD 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K + DL M LP + F L ++ +++ L + ++ G +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+IN Y ++ A + + G +P + ++L+N F + R EA A++ M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+PD+VT +TL+ L + + + + MV G PD
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y +++ K +D A+ +M + I+ + V +NT+ID CK +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +LF EM+ KG P V+TYN +IN + +W S LL+ M + + PN VTF
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + E + P YN LIN + D+A F+ M ++
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P++ N+LIN F + +R + + + M + L + VTYTT+++ +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+++MVS+ D ++L L
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ D + Y++ I+ F + + L A+A +M+ PD VT ++L++ +C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P T+ +I+ + K + L+ +M +G P+ VT+ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + AL L +++ K ++N +I++ + + AV+ F +M +G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ NSLIN R +A +L M E + P+VVT+ L+ A + K +
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 241 AVYEEMVSSGCTPD 254
++EEM+ PD
Sbjct: 349 KLHEEMIQRSIDPD 362
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A ++M+ +PD VT+ T+++ CK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M+ V+ +N +I+S+ + DL T M+++G+ PN VT+ +L++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA L + P +NALI+A+ + G +A +M + P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N LIN F R EA + ++M D P++ TY TL+ + + ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 245 EMVSSG 250
EM G
Sbjct: 423 EMSQRG 428
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++P+ YN +I+ + A ML ++I P+ VT+N LID K G
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L +EM Q+ P +TYN++IN + D+ + M S+ LPN T+ T
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K R D +E + G Y +I + Q G D A F++M +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++ + L++ + A + +Y+++++++ ++ Y T+++ + + KV
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG---KVG 520
Query: 241 AVYEEMVSSGCTPD 254
++ S PD
Sbjct: 521 EAWDLFCSLSIKPD 534
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ ++ + +N +ID+ K+ ++ A+ F M ++ IRP+ VT+N+LI+C C G
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L M +K +P V+T+N +I++ + K + L M + + P+ +T+
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R ++A + + + S P YN LIN + + + V FR+M+ G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + ++I F + A V + M N + D++TY+ L+ L K
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 241 AVYEEMVSS 249
+++ + S
Sbjct: 489 VIFKYLQKS 497
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P+ +N +ID F K L A E M+ I PDT+T+N LI+ C
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+++F+ M K P + TYN +IN ++ + +L M +GL+ N VT+TT
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPT---MYNALINAYAQRGLSDQAVNAFRKMT 177
++ + ++G + A V K M PT Y+ L++ G D A+ F+ +
Sbjct: 439 IIQGFFQAGDCDSA---QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
++ ++ N++I + + EA+ + + ++PDVVTY T++ L
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQ 552
Query: 238 KVPAVYEEMVSSGCTPDRKA-RAMLRSALR 266
+ ++ +M G P+ ++R+ LR
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 114/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ K N + ++ E+M + I D T++ I+C C+ A + +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T + ++N ++ L+ +M G P+ TFTTL+ + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + G +P Y ++N +RG D A+N KM A +K +++ N++I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + R A + M+ ++P+VVTY +L+ L ++ + M+
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 253 PD 254
P+
Sbjct: 326 PN 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD YN++I+ F N LD A F+ M+S++ P+ T+NTLI+ CK
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 61 HDRAEELFQEMQQKGY-----------------SPC------------------VLTYNI 85
+ ELF+EM Q+G C ++TY+I
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+++ + + K D + +Q + N + T+++ K+G+ +A + + S+
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD---LFCSLS 530
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
KP YN +I+ + L +A + FRKM +G P+ N+LI A + RD +
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA---NLRDCDRA 587
Query: 206 AVLQYMKE 213
A + +KE
Sbjct: 588 ASAELIKE 595
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 105/229 (45%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+D A+ F M+ P V +N L+ K + L ++MQ G S + TY+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
IN + + +L +M G P+ VT ++L++ Y S R +DA+ ++ + MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+KP + LI+ + +AV +M G +P L+ +++N + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L M+ ++ +VV + T++ +L + ++ EM + G P+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I+ N + K D DL M P+ V F L+ K +F + E ++++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G Y+ IN + +R A+ KM G +P ++ L+SL+N + +R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
A++ M E +PD T+TTL+ L +K + A+ ++MV GC PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + Y +I F + D A F++M+S + D +T++ L+ C G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +F+ +Q+ + YN MI M K + DL S + P+ VT+ T
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLSIKPDVVTYNT 540
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA--FRKMTA 178
++ +A + +K G P YN LI A + D+A +A ++M +
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD--CDRAASAELIKEMRS 598
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
G ++ + N + R D +L
Sbjct: 599 SGFVGDASTISLVTNMLHDGRLDKSFLNML 628
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG QPD YN +++ + A+ +M ++ D T++T+ID C+ G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+EM+ KG V+TYN ++ + KW+ + LL M S+ ++PN +TF
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+DV+ K G+ +A E + + + G P YN L++ Y + +A N M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ SLI + +R + V + + + L + VTY+ L++ + K
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EMVS G PD +L L
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ V+ D Y+ +ID+ + C+D A++ F+ M ++ I+ VT+N+L+ CKAG
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ L ++M + P V+T+N++++ + K + ++L M ++G+ PN +T+ T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y R ++A L+++ P + +LI Y D + FR ++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + + L+ F + + A + Q M + + PDV+TY L+ L K K
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 241 AVYEEMVSS 249
++E++ S
Sbjct: 459 EIFEDLQKS 467
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 125/246 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD +N +I + A+ +RM+ +PD VT+N++++ C++G A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+L ++M+++ V TY+ +I+S+ D L M+++G+ + VT+ +LV
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K+G++ND L+ + S P +N L++ + + G +A +++M G+ P+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ N+L++ + R EA +L M N PD+VT+T+L+K V + V+
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 245 EMVSSG 250
+ G
Sbjct: 393 NISKRG 398
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 9/276 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P+ YN ++D + N L A + M+ + PD VT+ +LI +C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ++F+ + ++G +TY+I++ K +L M S G+LP+ +T+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ ALE E L+ MY +I + G + A N F + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP+++ +I+ + EA +L+ M+E+ P+ TY TL++A +R
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 241 AVYEEMVSSGCTPDRKA---------RAMLRSALRY 267
+ EEM S G + D + AM R LRY
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 599
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 127/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++ YN ++ K + + M+S EI P+ +T+N L+D K G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL++EM +G SP ++TYN +++ Q + + +++L M P+ VTFT+
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y R +D ++ + G Y+ L+ + Q G A F++M + G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ L++ ++ + +A + + ++++ + +V YTT+++ + + K
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + G P+ ++ S L
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGL 518
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 121/251 (48%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG+ + + N+MI+ F + A + +++ PDT T+NTLI G
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A L M + G P V+TYN ++N + DLL +M+ + + + T++T++D
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ G + A+ + +++ G K + YN+L+ + G + + M + + P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ N L++ F ++ + EA + + M + P+++TY TLM ++ + +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 244 EEMVSSGCTPD 254
+ MV + C+PD
Sbjct: 357 DLMVRNKCSPD 367
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 93/189 (49%)
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D A LFQEM + P ++ ++ +++ ++++ V D +++ G+ N T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
++ + + + A L + +G++P T +N LI G +AV +M G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+P ++ NS++N A +L+ M+E +++ DV TY+T++ +L R +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 242 VYEEMVSSG 250
+++EM + G
Sbjct: 250 LFKEMETKG 258
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D L M LP+ V F+ ++ +FN L+ + L+ G N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+IN + + + A + K+ G +P N+LI + + EA ++ M EN
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 215 DLQPDVVTYTTLMKALIR 232
QPDVVTY +++ + R
Sbjct: 188 GCQPDVVTYNSIVNGICR 205
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 147 KPTPTM--YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
+P P++ ++ +A A+ + ++ +++ G+ ++ LN +IN F + A
Sbjct: 83 RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFA 142
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++VL + + +PD T+ TL+K L K + + + MV +GC PD
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 130/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ Y V+++ K +D A +M + +I + V ++T+ID CK +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM+ KG P V+TY+ +I+ + E+W S LL+ M + + PN VTF
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P Y++LIN + D+A + F M ++
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ N+LIN F + +R E + + M + L + VTYTTL+ +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 241 AVYEEMVSSGCTPD 254
V+++MVS G P+
Sbjct: 456 MVFKQMVSDGVHPN 469
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 127/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ GV+P+ Y+ +I + A M+ +I P+ VT+N LID K G
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ EM ++ P + TY+ +IN ++ D+ + M S+ PN VT+ T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K+ R ++ +E + G Y LI+ + Q D A F++M ++G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++ N+L++ ++ + +A V +Y++ + ++P + TY +++ + + K
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 241 AVYEEMVSSGCTPD 254
++ + G PD
Sbjct: 526 DLFCSLSLKGVKPD 539
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 113/219 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD Y+ +I+ F + LD A FE M+S++ P+ VT+NTLI+ CKA
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ELF+EM Q+G +TY +I+ D + +M S G+ PN +T+ T
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+G+ A+ E L+ +PT YN +I + G + + F ++ +G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
+KP ++ N++I+ F EA A+ + M+E+ PD
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 128/253 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ ++ + Y+ +ID+ K+ D A+ F M ++ +RP+ +T+++LI C C
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M ++ +P V+T+N +I++ + K + L M + + P+ T+++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R ++A E++ S P YN LIN + + D+ V FR+M+ G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + +LI+ F + R A V + M + + P+++TY TL+ L + K K
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 241 AVYEEMVSSGCTP 253
V+E + S P
Sbjct: 491 VVFEYLQRSKMEP 503
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 129/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + + YN++I+ F + + + A+A +M+ P VT ++L++ +C
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P +T+ +I+ + K + L+ RM +G PN VT+
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + A L +++ + +Y+ +I++ + D A+N F +M +G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ +SLI+ R +A +L M E + P+VVT+ L+ A ++ K +
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 241 AVYEEMVSSGCTPD 254
+Y+EM+ PD
Sbjct: 351 KLYDEMIKRSIDPD 364
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A +RM+ +P+ VT+ +++ CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M+ V+ Y+ +I+S+ D +L T M+++G+ PN +T+++L+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
R++DA L + P +NALI+A+ + G +A + +M + P
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +SLIN F R EA + + M D P+VVTY TL+ + + + ++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 245 EMVSSG 250
EM G
Sbjct: 425 EMSQRG 430
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 121/249 (48%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ +N +ID F K L A ++ M+ I PD T+++LI+ C D A+
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+F+ M K P V+TYN +IN ++ D+ +L M +GL+ N VT+TTL+ +
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++ ++A + + S G P YN L++ + G ++A+ F + ++P++
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I + + + + + + ++PDV+ Y T++ R + A++ +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 246 MVSSGCTPD 254
M G PD
Sbjct: 566 MREDGPLPD 574
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE---LFQEMQQKGYSPCVLT 82
+ A+A ++M+ RPDT+T+ TLI H++A E L M Q+G P ++T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIH---GLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 83 YNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK 142
Y +++N + + D +LL +M++ + N V ++T++D K +DAL ++
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 143 SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDP 202
+ G +P Y++LI+ A M + P+++ N+LI+AF ++ +
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 203 EAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
EA + M + + PD+ TY++L+ D+ + ++E M+S C P+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 119/247 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P +N ++ K D ++ E+M I + T+N LI+C C+ A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+M + GY P ++T + ++N ++ L+ +M G P+ +TFTTL+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ ++A+ ++ + G +P Y ++N +RG D A N KM A ++ +++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+++I++ + R + +A + M+ ++P+V+TY++L+ L +++ + +M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 248 SSGCTPD 254
P+
Sbjct: 323 ERKINPN 329
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P +N L+ K D L ++MQ+ G S + TYNI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + LL +M G P+ VT ++L++ Y R +DA+ ++ + MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P + LI+ + +AV +M G +P+L+ ++N + AF
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+L M+ ++ +VV Y+T++ +L + ++ EM + G P+ + L S L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D L M LP+ F L+ K +F+ + E ++ +G YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LIN + +R A+ KM G +PS++ L+SL+N + +R +A A++ M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+PD +T+TTL+ L +K + A+ + MV GC P+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+GV P+ YN ++D K L+ AM FE + ++ P T+N +I+ CKAG
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ +LF + KG P V+ YN MI+ + ++ L +M+ G LP++ T
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 130/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++PD Y+ +I + A ML +I P+ VT+N+LID K G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+LF EM Q+ P ++TYN +IN ++ D+ + T M S+ LP+ VT+ T
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K+ + D +E + G Y LI+ + Q D A F++M ++G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++ N+L++ ++ + +A V +Y++++ ++PD+ TY + + + + K
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 241 AVYEEMVSSGCTPD 254
++ + G PD
Sbjct: 506 DLFCSLSLKGVKPD 519
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 123/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y +I+ K D A+ +M +I D V ++T+ID CK +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM KG P V TY+ +I+ + +W S LL+ M + + PN VTF +
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P YN+LIN + D+A F M ++
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N+LIN F + ++ + + + M L + VTYTTL+ +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 241 AVYEEMVSSGCTPD 254
V+++MVS G P+
Sbjct: 436 MVFKQMVSDGVHPN 449
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G QPD + ++ + N A+A ERM+ + +PD VT+ +I+ CK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M++ V+ Y+ +I+S+ D +L T M ++G+ P+ T+++L+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA L + P +N+LI+A+A+ G +A F +M + P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ NSLIN F R EA + M D PDVVTY TL+ + K ++
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 245 EMVSSG 250
+M G
Sbjct: 405 DMSRRG 410
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P+ YN +I+ F + LD A F M+S++ PD VT+NTLI+ CKA
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
ELF++M ++G +TY +I+ D + +M S G+ PN +T+ T
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+G+ A+ E L+ +P YN + + G + + F ++ +G
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+KP ++A N++I+ F + EA+ + MKE+ PD TY TL++A +R
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ D Y+ +ID+ K+ +D A+ F M ++ IRPD T+++LI C C G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M ++ +P V+T+N +I++ + K + L M + + PN VT+ +
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R ++A + ++ S P YN LIN + + + FR M+ G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + +LI+ F + A V + M + + P+++TY TL+ L + K K
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 241 AVYEEMVSSGCTPD 254
V+E + S PD
Sbjct: 471 VVFEYLQKSKMEPD 484
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P N +++ F N + A+A ++M+ +PDTVT+ TL+ + A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L + M KG P ++TY +IN + + + D +LL +M+ + + V ++T++D
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K +DAL + + G +P Y++LI+ G A M + P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ NSLI+AF ++ + EA + M + + P++VTY +L+ D+ + ++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 245 EMVSSGCTPD 254
MVS C PD
Sbjct: 370 LMVSKDCLPD 379
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV + + YN+MI+ + + L A+A +M+ P VT N+L++ C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P +T+ +++ + K + L+ RM +G P+ VT+
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ K G + AL L ++ + +Y+ +I++ + D A+N F +M +G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P + +SLI+ R +A +L M E + P+VVT+ +L+ A + K +
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 241 AVYEEMVSSGCTPD 254
+++EM+ P+
Sbjct: 331 KLFDEMIQRSIDPN 344
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 115/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K D ++ E+M + + T+N +I+C C+ A + +M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T N ++N + + L+ +M G P+ VTFTTLV + + +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ +E + G +P Y A+IN +RG D A+N KM ++ ++ +++I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + R +A + M ++PDV TY++L+ L ++ + +M+
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 253 PD 254
P+
Sbjct: 308 PN 309
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P V ++ L+ K D ++M+ G S + TYNI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
MIN + + + +L +M G P+ VT +L++ + R ++A+ ++ + MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE-A 204
++P + L++ Q + +AV +M +G +P L+ ++IN + R +P+ A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-RGEPDLA 224
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+L M++ ++ DVV Y+T++ +L + ++ EM + G PD + L S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 265 L 265
L
Sbjct: 285 L 285
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D+ DL M P+ V F+ L+ K +F+ + E ++ +G YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+IN +R A+ KM G PS++ LNSL+N F R EA A++ M E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
QPD VT+TTL+ L + +K + A+ E MV GC PD
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+PD YN MI F K + A F +M + PD+ T+NTLI H + G +
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 65 EELFQEMQQKGYSPCVLTYNIMIN 88
EL +EM+ ++ TY ++ +
Sbjct: 575 AELIKEMRSCRFAGDASTYGLVTD 598
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 131/251 (52%), Gaps = 1/251 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS+ + D YNV ID+FGK +D A F + + ++PD VT+ ++I CKA
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E+F+ +++ PC YN MI G+ K+D+ LL R +++G +P+ + +
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G+ ++AL+ E +K P + YN LI+ + G D A M G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P++ +N +++ + ++ EA A+ + M PD +T+ +L+ L +V +
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 241 AVYEEMVSSGC 251
VYE+M+ S C
Sbjct: 468 KVYEKMLDSDC 478
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K+ PD Y+++I K + F M + DT +N +ID CK G
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A +L +EM+ KG+ P V+TY +I+ + ++ D+ L +S+ + N V +++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +GK GR ++A LE L G P +N+L++A + ++A+ F+ M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+ + LIN + R+ +AF Q M++ ++P ++YTT++ L + +
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 241 AVYEEMVSSGCTPD 254
A+++ ++G PD
Sbjct: 783 ALFDRFKANGGVPD 796
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 6/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD N +D K + A FE + + PD +++ LI KAG+
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 61 HDRAEELFQEMQQKGYSPCVL---TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ ELF M+++G CVL YNI+I+ K ++ LL M+++G P VT
Sbjct: 568 ANETYELFYSMKEQG---CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ +++D K R ++A E KS + +Y++LI+ + + G D+A ++
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+GL P+L NSL++A + EA Q MKE P+ VTY L+ L +V KF+
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
K ++EM G P + + S L
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 148/298 (49%), Gaps = 35/298 (11%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTW------------------- 48
PD + +ID GK +D A +E+ML + R +++ +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 49 ----------------NTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGA 92
NT +DC KAG ++ +F+E++ + + P +Y+I+I+ +
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
++ +L M+ QG + + + ++D + K G+ N A + LE +K+ GF+PT
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y ++I+ A+ D+A F + ++ ++ +++ +SLI+ FG+ R EA+ +L+ +
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
+ L P++ T+ +L+ AL++ ++ ++ ++ M CTP++ +L + L +R+
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
++ G P YN ++ K +D A+ FE M ++ P+ T+N LID C+AG
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D A EL MQ+ G P V T NIM++ + +K D+ + M + P+ +TF +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D GK GR +DA + E + + +Y +LI + G + ++ M +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P L LN+ ++ + + A+ + +K PD +Y+ L+ LI+ ++
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 242 VYEEMVSSGCTPDRKA 257
++ M GC D +A
Sbjct: 574 LFYSMKEQGCVLDTRA 589
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G D YN++ID F K ++ A E M ++ P VT+ ++ID K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+E + K V+ Y+ +I+ G + D+ +L + +GL PN T+ +
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+ N+AL C + +K + P Y LIN + ++A +++M +G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KPS ++ ++I+ + EA A+ K N PD Y +++ L ++
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EE G K +L L
Sbjct: 818 SLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +P Y +I F N D + F++M P + TLI K G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L EM+ ++ YN+ I+S G K D +++ GL P+ VT+T+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ V K+ R ++A+E E L+ P YN +I Y G D+A + + A+G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
PS++A N ++ + + EA V + MK+ D P++ TY L+ L R K
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 241 AVYEEMVSSGCTPD 254
+ + M +G P+
Sbjct: 398 ELRDSMQKAGLFPN 411
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ N P + YN MI +G D A + ER ++ P + +N ++ C K G
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++F+EM+ K +P + TYNI+I+ + K D +L MQ GL PN T
Sbjct: 359 VDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+VD KS + ++A E + P + +LI+ + G D A + KM
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + + SLI F R + + + M + PD+ T M + + + K
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
A++EE+ + PD ++ ++L L
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGL 562
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 5/263 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G +P Y +ID K + LD A FE S+ I + V +++LID K G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A + +E+ QKG +P + T+N +++++ E+ ++ M+ PN VT+
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ K +FN A + ++ G KP+ Y +I+ A+ G +A F + A G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P N++I R +AF++ + + L T L+ L + D +
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
Query: 241 AVYEEMVSSGCTPDRKARAMLRS 263
V + +G KAR RS
Sbjct: 853 IVGAVLRETG-----KARHAARS 870
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 22 KFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVL 81
K N L + M + RP + TLI + D LFQ+MQ+ GY P V
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
+ +I + + D LL M+S L + V + +D +GK G+ + A + +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
++ G KP Y ++I + D+AV F + P A N++I +G +
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
EA+++L+ + P V+ Y ++ L ++ K + V+EEM
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 35/276 (12%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN++ID + LD A + M + P+ T N ++D CK+ D A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F+EM K +P +T+ +I+ +G + D + +M N++ +T+L+ +
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 128 SGR----------------------FNDALECL-------------EVLKSMGFKPTPTM 152
GR N ++C+ E +K+ F P
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y+ LI+ + G +++ F M +G A N +I+ F + + +A+ +L+ MK
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
+P VVTY +++ L ++D+ + ++EE S
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%)
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++ Q M++ + P Y +I + A D + L +MQ G P FTTL+ +
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
K GR + AL L+ +KS +YN I+++ + G D A F ++ A GLKP
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ S+I + R EA + +++++N P Y T++ KF + ++ E
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 246 MVSSGCTPDRKARAMLRSALRYM 268
+ G P A + + LR M
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKM 356
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 62 DRAEELFQEMQQKGYSP-CVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+RA E F+ +++ P C +YN ++ M +D + +L M G P+ T
Sbjct: 79 NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V K+ + + + +++++ F+P + Y LI A++ SD + F++M G
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P++ +LI F ++ R A ++L MK + L D+V Y + + +V K
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 241 AVYEEMVSSGCTPD 254
+ E+ ++G PD
Sbjct: 259 KFFHEIEANGLKPD 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 96/200 (48%)
Query: 47 TWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM 106
++N+L+ + D +++ EM G+ P V T M+ K + D++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 107 QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS 166
+ P +TTL+ + + L + ++ +G++PT ++ LI +A+ G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 167 DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
D A++ +M + L ++ N I++FG+ + A+ ++ N L+PD VTYT++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 227 MKALIRVDKFHKVPAVYEEM 246
+ L + ++ + ++E +
Sbjct: 280 IGVLCKANRLDEAVEMFEHL 299
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 122/248 (49%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
QPD YN +I+ F K N +D A +RM S++ PDTVT+N +I C G D A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ ++ P V+TY I+I + + D+ L+ M S+GL P+ T+ T++
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G + A E + L+ G +P YN L+ A +G ++ KM +E P+++
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ LI D + EA +L+ MKE L PD +Y L+ A R + E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 247 VSSGCTPD 254
+S GC PD
Sbjct: 395 ISDGCLPD 402
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 132/252 (52%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S+ QP Y ++I+ +D A+ + MLS ++PD T+NT+I CK G D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
RA E+ + ++ KG P V++YNI++ ++ Q KW++ L+T+M S+ PN VT++ L+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ G+ +A+ L+++K G P Y+ LI A+ + G D A+ M ++G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P ++ N+++ ++ + +A + + E P+ +Y T+ AL + +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 243 YEEMVSSGCTPD 254
EM+S+G PD
Sbjct: 461 ILEMMSNGIDPD 472
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ PD + Y+ +I F + LD A+ E M+S+ PD V +NT++ CK G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+A E+F ++ + G SP +YN M +++ + + ++ M S G+ P+ +T+ +
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + G ++A E L ++S F P+ YN ++ + + + A+N M G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 181 LKPSLLALNSLINAFG 196
+P+ LI G
Sbjct: 539 CRPNETTYTVLIEGIG 554
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S P+ Y+++I T + ++ AM + M + + PD +++ LI C+ G
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E + M G P ++ YN ++ ++ K DQ ++ ++ G PN+ ++ T
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ SG AL + + S G P YN++I+ + G+ D+A M +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
PS++ N ++ F + R +A VL+ M N +P+ TYT L++ +
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 28 HAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMI 87
++ E M+ + PD + LI +A + + +++ G P V YN +I
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 88 NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFK 147
N + D + +L RM+S+ P+ VT+ ++ G+ + AL+ L L S +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 148 PTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV 207
PT Y LI A G D+A+ +M + GLKP + N++I ++ AF +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++ ++ +PDV++Y L++AL+ K+ + + +M S C P+ ++L + L
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P+ YN M A+ M+S I PD +T+N++I C C+ G D A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL +M+ + P V+TYNI++ + + ++L M G PN T+T L++
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 125 YGKSGRFNDALE 136
G +G +A+E
Sbjct: 553 IGFAGYRAEAME 564
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD + +++ + +N ++ A+A F+++L +P+ VT+ TLI C CK +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ELF +M G P V+TYN ++ + +W + LL M + + PN +TFT
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A E V+ M P Y +LIN GL D+A F M G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+ + +LI+ F + +R + + M + + + +TYT L++ V +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+ +M S PD + +L L
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGL 408
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+ A+ F RM+ P + + L+ K +D LF++MQ G P + T NI
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+++ + + + S L +M G P+ VTFT+L++ Y R DA+ + + MG
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
FKP Y LI + + AV F +M G +P+++ N+L+ E R +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M + ++P+V+T+T L+ A ++V K + +Y M+ PD
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +NG +P+ YN ++ + A M+ I P+ +T+ LID K G
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+EL+ M Q P V TY +IN + D+ + M+ G PN V +TT
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + KS R D ++ + G Y LI Y G D A F +M++
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P + N L++ + + +A + +YM++ ++ ++VTYT +++ + ++ K
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 241 AVYEEMVSSGCTPD 254
++ + S G P+
Sbjct: 454 DLFCSLFSKGMKPN 467
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ K N D ++ FE+M I P T N ++ C C + RA +M + G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSD---LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ P ++T+ ++N W+++ D L ++ G PN VT+TTL+ K+ N
Sbjct: 149 FEPDLVTFTSLLN---GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A+E + + G +P YNAL+ + G A R M ++P+++ +LI
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+AF + + EA + M + + PDV TY +L+ L + ++ M +GC
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 253 PD 254
P+
Sbjct: 326 PN 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V PD Y +I+ + LD A F M P+ V + TLI CK+ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++F EM QKG +TY ++I + D ++ +M S+ P+ T+ L+D
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+G+ AL E ++ Y +I + G + A + F + ++G+KP++
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
+ ++I+ F EA ++ + MKE+ P+ Y
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV + Y V+I + D A F +M S PD T+N L+D C G
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A +F+ M+++ ++TY I+I M K + DL + S+G+ PN +T+TT
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMY 153
++ + + G ++A + +K GF P ++Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
+++ DL TRM LP+ + FT L+ V K R++ + E ++ +G P N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+++ +A KM G +P L+ SL+N + R +A A+ +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+P+VVTYTTL++ L + + ++ +M ++G P+
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G +P+ YN +I ++G+ N L AM F +M PD VT+ TLID H KAG+
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +++Q MQ+ G SP TY+++IN +G L M QG PN VTF
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ ++ K+ + AL+ +++ GF+P Y+ ++ G ++A F +M +
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L++ +G+ +A+ Q M + L+P+V T +L+ +RV + +
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 241 AVYEEMVSSGCTPDRKARAMLRS 263
+ + M++ G P + +L S
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLS 647
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ PD Y+V+I+ GK L A F M+ + P+ VT+N +I H KA
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ A +L+++MQ G+ P +TY+I++ +G ++ + MQ + +P+ +
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVD++GK+G + A + + + G +P N+L++ + + +A N + M A G
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
Query: 181 LKPSLLALNSLINAFGEDRRD 201
L PSL L++ + R +
Sbjct: 635 LHPSLQTYTLLLSCCTDARSN 655
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D T+ T++ +A +L EM + G P +TYN +I+S G + ++
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+MQ G P+ VT+ TL+D++ K+G + A++ + ++ G P Y+ +IN +
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G A F +M +G P+L+ N +I + R A + + M+ QPD VTY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ +M+ L + V+ EM PD +L
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+Q G+ TY M+ ++G +++ +++ LL M G PN VT+ L+ YG++
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+A+ ++ G +P Y LI+ +A+ G D A++ +++M GL P + +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
IN G+ P A + M P++VT+ ++ + + +Y +M ++G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 252 TPDRKARAMLRSALRY 267
PD+ +++ L +
Sbjct: 531 QPDKVTYSIVMEVLGH 546
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ PD YN MID FGK LD + FE M PD +T+N LI+C CK G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
E ++EM+ G P V++Y+ ++++ + Q M+ GL+PN T+T+
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K G +DA + +G + Y ALI+ +A F KM G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+L + N+LI+ F + + A +L +K ++PD++ Y T + L ++K
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V EM G KA +++ + L
Sbjct: 528 VVMNEMKECGI----KANSLIYTTL 548
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V P N ++ F K D F+ M+ RP T+N +IDC CK G
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A LF+EM+ +G P +TYN MI+ G + D M+ P+ +T+
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K G+ LE +K G KP Y+ L++A+ + G+ QA+ + M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+ SLI+A + +AF + M + ++ +VVTYT L+ L ++ +
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 241 AVYEEMVSSGCTPD 254
++ +M ++G P+
Sbjct: 458 ELFGKMDTAGVIPN 471
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 10/247 (4%)
Query: 14 NVMIDTFGKFNCL----------DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NV + FG F+ L + A+ F +M + P T + N L+ K G D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+ F++M G P V TYNIMI+ M + + L M+ +GL+P+ VT+ +++D
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+GK GR +D + E +K M +P YNALIN + + G + +R+M GLKP
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
++++ ++L++AF ++ +A M+ L P+ TYT+L+ A ++ +
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 244 EEMVSSG 250
EM+ G
Sbjct: 426 NEMLQVG 432
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 36/297 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NG++P+ Y+ ++D F K + A+ + M + P+ T+ +LID +CK G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L EM Q G V+TY +I+ + E+ + +L +M + G++PN ++
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+ + ALE L LK G KP +Y I + A +M G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR-------V 233
+K + L +L++A+ + E +L MKE D++ VVT+ L+ L + V
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 234 DKFHKVP-----------------------------AVYEEMVSSGCTPDRKARAML 261
D F+++ ++E+MV G PDR A L
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+ + Y +ID + A F +M + + P+ ++N LI KA DRA
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL E++ +G P +L Y I + + EK + ++ M+ G+ N++ +TTL+D
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-GLKP 183
Y KSG + L L+ +K + + T + LI+ + L +AV+ F +++ + GL+
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ ++I+ +D + A + + M + L PD YT+LM + + A+
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 244 EEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
++M G D A L L + Q K+
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDL 102
P ++ L G + A + F +M++ P + N +++ K D V
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 103 LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
M G P T+ ++D K G A E +K G P YN++I+ + +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
G D V F +M +P ++ N+LIN F + + P + MK N L+P+VV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
Y+TL+ A + + Y +M G P+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G++PD Y I ++ A M I+ +++ + TL+D + K+G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFT 119
L EM++ V+T+ ++I+ + + + D R+ + GL NA FT
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++D K + A E + G P T Y +L++ ++G +A+ KM
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMK 228
G+K LLA SL+ + +A + L+ M + PD V +++K
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%)
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN 171
+P F L V G +A++C +K P N L++ +A+ G +D
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
F+ M G +P++ N +I+ ++ A + + MK L PD VTY +++
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 232 RVDKFHKVPAVYEEMVSSGCTPD 254
+V + +EEM C PD
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPD 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 1/217 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++ + Y ++D + K + + M +I VT+ LID CK
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+A + F + G + MI+ + + + + L +M +GL+P+ +T
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+D K G +AL + + +G K Y +L+ + +A + +M E
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
G+ P + S++ E EA + Y+ ++ L
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 129/250 (51%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PDR +++ F + N + A++ ++M+ +PD V +N +ID CK + A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ F+E+++KG P V+TY ++N + +W + LL+ M + + PN +T++ L+D
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K+G+ +A E E + M P Y++LIN D+A F M ++G
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+++ N+LIN F + +R + + + M + L + VTY TL++ + K +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 245 EMVSSGCTPD 254
+M G +PD
Sbjct: 390 QMDFFGISPD 399
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 131/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ G++P+ Y +++ + A M+ ++I P+ +T++ L+D K G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ELF+EM + P ++TY+ +IN + ++ D+ + + M S+G L + V++ T
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K+ R D ++ + G YN LI + Q G D+A F +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + N L+ ++ +A + + M++ ++ D+VTYTT+++ + + K +
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++ + G PD + S L
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P+ Y+ ++D F K + A FE M+ I PD VT+++LI+ C
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++F M KG V++YN +IN ++ + L M +GL+ N VT+ T
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + ++G + A E + G P YN L+ G ++A+ F M
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++ ++I + + EA+++ + L+PD+VTYTT+M L H+V
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 241 AVYEEMVSSG 250
A+Y +M G
Sbjct: 491 ALYTKMKQEG 500
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++ D + +N++I+ F + A++ +ML PD VT +L++ C+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P ++ YN +I+S+ ++ + D ++ +G+ PN VT+T
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV+ S R++DA L + P Y+AL++A+ + G +A F +M
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ +SLIN R EA + M DVV+Y TL+ + +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 241 AVYEEMVSSG 250
++ EM G
Sbjct: 351 KLFREMSQRG 360
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ K D ++ ++M IR D T+N +I+C C A + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P +T ++N + + L+ +M G P+ V + ++D K+ R N
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
DA + + ++ G +P Y AL+N A M + + P+++ ++L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+AF ++ + EA + + M + PD+VTY++L+ L D+ + +++ MVS GC
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 253 PD 254
D
Sbjct: 328 AD 329
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
L+ A+ F M+ P V +N L+ K +D L ++M+ G + T+NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + +L +M G P+ VT +LV+ + + R +DA+ ++ + +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+KP YNA+I++ + + A + F+++ +G++P+++ +L+N R +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L M + + P+V+TY+ L+ A ++ K + ++EEMV PD
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G D YN +I+ F K ++ M F M + +TVT+NTLI +AG
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+A+E F +M G SP + TYNI++ + + ++ + MQ + + + VT+TT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K+G+ +A L G KP Y +++ +GL + + KM EG
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 181 L 181
L
Sbjct: 501 L 501
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ PD YN+++ L+ A+ FE M E+ D VT+ T+I CK G + A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
LF + KG P ++TY M++ + + +V L T+M+ +GL+ N T +
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS----- 509
Query: 125 YGKSGRFNDALECLEVLKSMGFKPT 149
G + E ++ + S G+ P+
Sbjct: 510 ---DGDITLSAELIKKMLSCGYAPS 531
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K + DL + M P+ V F L+ K +++ + + ++ +G + +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+IN + A++ KM G +P + + SL+N F R +A +++ M E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+PD+V Y ++ +L + + + ++E+ G P+
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G QPD Y +++ K +D A++ ++M +I D V + T+ID C
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A LF EM KG P V+TYN +I + +W S LL+ M + + PN VTF+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P Y++LIN + D+A + F M ++
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ N+LI F + +R E + + M + L + VTY TL++ L +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++++MVS G PD ++L L
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGL 475
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD Y+ +I+ F + LD A FE M+S++ P+ VT+NTLI CKA
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF+EM Q+G +TYN +I + D + +M S G+ P+ +T++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K G+ AL E L+ +P YN +I + G + + F ++ +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP+++ ++I+ F EA A+ + MKE+ P+ TY TL++A +R
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EM S G D +M+ + L
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINML 615
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++P+ YN +I + A M+ +I P+ VT++ LID K G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ EM ++ P + TY+ +IN ++ D+ + M S+ PN VT+ T
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+ R + +E + G YN LI Q G D A F+KM ++G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ + L++ + + +A V +Y++++ ++PD+ TY +++ + + K
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 241 AVYEEMVSSGCTPD 254
++ + G P+
Sbjct: 521 DLFCSLSLKGVKPN 534
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
QP+ +N +I N A+A +RM++ +PD T+ T+++ CK G D A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
L ++M++ V+ Y +I+++ + + +L T M ++G+ PN VT+ +L+
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
GR++DA L + P ++ALI+A+ + G +A + +M + P +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+SLIN F R EA + + M D P+VVTY TL+K + + + ++ EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 247 VSSG 250
G
Sbjct: 422 SQRG 425
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ + D + YN++I+ F + + L A+A +M+ PD VT ++L++ +C
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M Y P +T+N +I+ + K + L+ RM ++G P+ T+ T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + AL L+ ++ + +Y +I+A + A+N F +M +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ NSLI R +A +L M E + P+VVT++ L+ A ++ K +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 241 AVYEEMVSSGCTPD 254
+Y+EM+ PD
Sbjct: 346 KLYDEMIKRSIDPD 359
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +++ + + A+A ++M E +P+TVT+NTLI H++A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH---GLFLHNKA 201
Query: 65 EE---LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
E L M +G P + TY ++N + + D LL +M+ + + V +TT+
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D NDAL + + G +P YN+LI G A M +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+++ ++LI+AF ++ + EA + M + + PD+ TY++L+ D+ +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 242 VYEEMVSSGCTPD 254
++E M+S C P+
Sbjct: 382 MFELMISKDCFPN 394
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P V +N L+ K D L + MQ S + +YNI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + +L +M G P+ VT ++L++ Y R ++A+ ++ + M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P +N LI+ + +AV +M A G +P L +++N + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++L+ M++ ++ DVV YTT++ AL + ++ EM + G P+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + YN +I + D A F++M+S+ + PD +T++ L+D CK G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A +F+ +Q+ P + TYNIMI M K + DL + +G+ PN + +TT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A +K G P YN LI A + G + ++M + G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
++ +IN + R + +L
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D DL M LP+ V F L+ K +F+ + E ++++ YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LIN + +R A+ KM G +P ++ L+SL+N + +R EA A++ M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ QP+ VT+ TL+ L +K + A+ + MV+ GC PD
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+ G+ P+ YN MID + + L A E M + ++PD + +N LI C+ G +
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
AE+ +M+ KG SP V TYNI+I G + ++D+ D+L M+ G +PN V++ TL+
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ K + +A ++ G P +YN LI+ +G + A ++M +G++
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+L+ N+LI+ + EA +L + L+PDV TY +L+ + A+
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 243 YEEMVSSGCTPDRKARAMLRS 263
YEEM SG P K +L S
Sbjct: 622 YEEMKRSGIKPTLKTYHLLIS 642
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 80/353 (22%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + + P YNV+ID K ++ A F+ ML+ + P +T+NTLID +CKAG
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 61 HDR-----------------------------------AEELFQEMQQKGYSPCVLTYNI 85
++ AE + +EM+ G+ P T++I
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 86 M-----------------------------------INSMGAQEKWDQVSDLLTRMQSQG 110
+ +N++ + K ++ ++L R ++G
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
L+PN V + T++D Y + G A +E ++ G KP YN LI + + G + A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 171 NAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
KM +G+ PS+ N LI +G + F +L+ M++N P+VV+Y TL+ L
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPDRKARAML----------RSALRYMRQTLK 273
+ K + V +M G +P + ML A R+ ++ LK
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 31/285 (10%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK GV P YN++I +G+ D + M P+ V++ TLI+C CK
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ + ++M+ +G SP V YN++I+ ++ K + M +G+ N VT+ T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ ++A + L + G KP YN+LI+ Y G + + + +M G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 181 LKPSLLALNSLIN------------AFGEDRRDPE-------------------AFAVLQ 209
+KP+L + LI+ FGE P+ AF + +
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M E + D TY +L+ ++V K +V ++ +EM + P+
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 6/254 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P + Y I K + + + F RM + I P +N LID CK + AE+
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 67 LFQEMQQKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
LF EM + P ++TYN +I+ G EK +V + RM++ + P+ +TF TL+
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE---RMKADHIEPSLITFNTLLK 292
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K+G DA L+ +K +GF P ++ L + Y+ ++ A+ + G+K
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ + L+NA ++ + +A +L L P+ V Y T++ R
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 244 EEMVSSGCTPDRKA 257
E M G PD A
Sbjct: 413 EAMEKQGMKPDHLA 426
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 6/251 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV P YN++ID ++ A + ML + I + VT+NTLID G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L E+ +KG P V TYN +I+ G + L M+ G+ P T+
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 121 LVDVYGKSGRFNDALECLE-VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ + K G +E E + M KP +YN +++ YA G ++A N ++M +
Sbjct: 640 LISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ NSLI + + E +++ M +++P+ TY ++K V +
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 240 PAVYEEMVSSG 250
Y EM G
Sbjct: 755 YVWYREMQEKG 765
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 111/254 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+++ G+ P +++D K + F +L + RP + I K
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF M+ P V YN++I+ + ++ + L M ++ LLP+ +T+ T
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y K+G + + E +K+ +P+ +N L+ + G+ + A N ++M G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P + L + + + + A V + ++ ++ + T + L+ AL + K K
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 241 AVYEEMVSSGCTPD 254
+ ++ G P+
Sbjct: 375 EILGREMAKGLVPN 388
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+ A F + +E I P + + L+D K +F + + + P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
I + + +L RM+ + P+ + L+D K R NDA + + + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P+ YN LI+ Y + G +++ +M A+ ++PSL+ N+L+ + +A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
VL+ MK+ PD T++ L +K VYE V SG + ++L +AL
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
MK +G++P Y+++I C + ER+ E ++PD + +N ++ C+ G
Sbjct: 625 MKRSGIKPTLKTYHLLISL-----CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
++A L ++M +K TYN +I K +V L+ M ++ + P A T+
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+V + + + A ++ GF + N L++ + S +A +M
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ Y +++ K AM +M I+ D V ++ +ID CK G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM+ KG+ ++TYN +I +WD + LL M + + PN VTF+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + L+ + G P YN+LI+ + + ++A+ M ++G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N LIN + + R + + + M + + VTY TL++ + K
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EMVS PD + +L L
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 130/249 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ D Y+++ID K LD+A F M + + D +T+NTLI C AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +L ++M ++ SP V+T++++I+S + K + LL M +G+ PN +T+ +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K R +A++ ++++ S G P +N LIN Y + D + FR+M+ G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + + N+L+ F + + A + Q M ++PD+V+Y L+ L + K
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 241 AVYEEMVSS 249
++ ++ S
Sbjct: 494 EIFGKIEKS 502
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S G+ + ++MI+ F + L +A +T +++ PDTV +NTL++ C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL M + G+ P ++T N ++N + K L+ RM G PN VT+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++V KSG+ A+E L ++ K Y+ +I+ + G D A N F +M +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
K ++ N+LI F R + +L+ M + + P+VVT++ L+ + ++ K +
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 241 AVYEEMVSSGCTPD 254
+ +EM+ G P+
Sbjct: 354 QLLKEMMQRGIAPN 367
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 125/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G + D YN +I F D M+ +I P+ VT++ LID K G
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++L +EM Q+G +P +TYN +I+ + + ++ ++ M S+G P+ +TF
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ R +D LE + G YN L+ + Q G + A F++M +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P +++ L++ ++ +A + ++++ ++ D+ Y ++ + K
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + G D +A ++ S L
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISEL 553
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ YN +ID F K N L+ A+ + M+S+ PD +T+N LI+ +CKA
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ELF+EM +G +TYN ++ K + L M S+ + P+ V++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G ALE ++ + +Y +I+ D A + F + +G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+K A N +I+ +A + + M E PD +TY L++A + D
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ EEM SSG D M+ + L
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINML 623
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 118/246 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P N +++ + A+ +RM+ +P+ VT+ +++ CK+G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL ++M+++ + Y+I+I+ + D +L M+ +G + +T+ TL+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ +GR++D + L + P ++ LI+++ + G +A ++M G+ P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ NSLI+ F ++ R EA ++ M PD++T+ L+ + ++ ++
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 245 EMVSSG 250
EM G
Sbjct: 428 EMSLRG 433
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 109/242 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N + K + +A ++M S+ I T + +I+C C+ A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P + +N ++N + + + + +L+ RM G P +T TLV+ +G+ +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
DA+ ++ + GF+P Y ++N + G + A+ RKM +K + + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ +D AF + M+ + D++TY TL+ ++ + +M+ +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 253 PD 254
P+
Sbjct: 331 PN 332
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
D A+ F M+ P + +N L K ++ L ++M+ KG + + T +IM
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
IN K + ++ G P+ V F TL++ R ++ALE ++ + MG
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
KPT N L+N G AV +M G +P+ + ++N + + A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M+E +++ D V Y+ ++ L + ++ EM G D
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+ D YN+MI + + L A F +M E PD +T+N LI H A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
EL +EM+ G+ V T ++IN + + E D+L+
Sbjct: 598 AELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
L+Y ++S K D DL M LP + F L K+ ++ L +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 141 LKSMGFKPTPTMYNALINAYAQ-RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
++S G + + +IN + + R LS A + K+ G +P + N+L+N +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLS-YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
R EA ++ M E +P ++T TL+ L K + + MV +G P+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 128/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y +++ K +D A++ ++M +I D V +NT+ID CK +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM KG P V TY+ +I+ + +W S LL+ M + + PN VTF+
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P Y++LIN + D+A + F M ++
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ ++LI F + +R E + + M + L + VTYTTL+ +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 241 AVYEEMVSSGCTPD 254
V+++MVS G P+
Sbjct: 454 MVFKQMVSVGVHPN 467
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD Y+ +I+ F + LD A FE M+S++ P+ VT++TLI CKA
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF+EM Q+G +TY +I+ D + +M S G+ PN +T+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+G+ A+ E L+ +P YN +I + G + F ++ +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++A N++I+ F EA ++L+ MKE+ P+ TY TL++A +R
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EM S G D ++ + L
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNML 618
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 125/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++PD Y+ +I + A M+ +I P+ VT++ LID K G
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ EM ++ P + TY+ +IN ++ D+ + M S+ PN VT++T
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+ R + +E + G Y LI+ + Q D A F++M + G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++L N L++ ++ + +A V +Y++ + ++PD+ TY +++ + + K
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 241 AVYEEMVSSGCTPD 254
++ + G +P+
Sbjct: 524 ELFCNLSLKGVSPN 537
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ D + Y++ I+ F + + L A+A +M+ PD VT ++L++ +C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P T+ +I+ + K + L+ +M +G P+ VT+ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + AL L+ ++ + +YN +I+ + D A+N F +M +G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P + +SLI+ R +A +L M E + P+VVT++ L+ A ++ K +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 241 AVYEEMVSSGCTPD 254
+Y+EM+ PD
Sbjct: 349 KLYDEMIKRSIDPD 362
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A ++M+ +PD VT+ T+++ CK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L ++M++ V+ YN +I+ + + D +L T M ++G+ P+ T+++L+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA L + P ++ALI+A+ + G +A + +M + P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +SLIN F R EA + + M D P+VVTY+TL+K + + + ++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 245 EMVSSG 250
EM G
Sbjct: 423 EMSQRG 428
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+D A+ F M+ P V +N L+ K + L ++MQ G S + TY+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
IN + + +L +M G P+ VT ++L++ Y S R +DA+ ++ + MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+KP + LI+ + +AV +M G +P L+ +++N + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++L+ M++ ++ DVV Y T++ L + ++ EM + G PD + L S L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 113/242 (46%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ K N + ++ E+M + I D T++ I+C C+ A + +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T + ++N ++ L+ +M G P+ TFTTL+ + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + G +P Y ++N +RG D A++ +KM ++ ++ N++I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + + +A + M ++PDV TY++L+ L ++ + +M+
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 253 PD 254
P+
Sbjct: 326 PN 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + Y +I F + D+A F++M+S + P+ +T+N L+D CK G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A +F+ +Q+ P + TYNIMI M K + +L + +G+ PN + + T
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A L+ +K G P YN LI A + G + + ++M + G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+ + N + R D +L
Sbjct: 604 FAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I+ N + K D DL M P+ V F L+ K +F + E ++++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G Y+ IN + +R A+ KM G +P ++ L+SL+N + +R +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
A++ M E +PD T+TTL+ L +K + A+ ++MV GC PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 127/256 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S + PD Y +I F + + A F M + + PD+VT+ LI+ +CKAG+
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + M Q G SP V+TY +I+ + + D ++LL M GL PN T+ +
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ KSG +A++ + ++ G Y L++AY + G D+A ++M +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P+++ N L+N F + +L +M + P+ T+ +L+K +
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 241 AVYEEMVSSGCTPDRK 256
A+Y++M S G PD K
Sbjct: 617 AIYKDMCSRGVGPDGK 632
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 118/253 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++P+ + Y +I + L A F M+ + I PDTV + TLID CK G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + F EM + +P VLTY +I+ + L M +GL P++VTFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+G DA + G P Y LI+ + G D A +M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P++ NS++N + EA ++ + L D VTYTTLM A + + K
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 241 AVYEEMVSSGCTP 253
+ +EM+ G P
Sbjct: 547 EILKEMLGKGLQP 559
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + +I+ + K + A M+ P+ VT+ TLID CK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A EL EM + G P + TYN ++N + ++ L+ ++ GL + VT+TT
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y KSG + A E L+ + G +PT +N L+N + G+ + M A+G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 181 LKPSLLALNSLINAF---------------------GED--------------RRDPEAF 205
+ P+ NSL+ + G D R EA+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ Q MK V TY+ L+K ++ KF + V+++M G D++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN++I + + A M + PD ++++T+++ +C+ G D+ +L + M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+KG P Y +I + K + + + M QG+LP+ V +TTL+D + K G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A + + S P Y A+I+ + Q G +A F +M +GL+P + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N + + +AF V +M + P+VVTYTTL+ L + + EM G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 253 PD 254
P+
Sbjct: 489 PN 490
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 15/249 (6%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI-----DCHCKAGYHDRAEE 66
F+ V++D F L A FE+ML+ + + N + DC+ A A
Sbjct: 181 FFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA----TAII 232
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+F+E + G V +YNI+I+ + + + LL M+ +G P+ ++++T+V+ Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+ G + + +EV+K G KP +Y ++I + +A AF +M +G+ P +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 187 ALNSLINAFGEDRRDPEAFAVLQY-MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+LI+ F + R D A + Y M D+ PDV+TYT ++ ++ + ++ E
Sbjct: 353 VYTTLIDGFCK-RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 246 MVSSGCTPD 254
M G PD
Sbjct: 412 MFCKGLEPD 420
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+ F + + ++N +I C+ G A L M+ KGY+P V++Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ D+V L+ M+ +GL PN+ + +++ + + + +A E + G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
+Y LI+ + +RG A F +M + + P +L ++I+ F + EA +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M L+PD VT+T L+ + V+ M+ +GC+P+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G PD Y+ +++ + +F LD E M + ++P++ + ++I C+
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEE F EM ++G P + Y +I+ + S M S+ + P+ +T+T
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A + + G +P + LIN Y + G A M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ +LI+ ++ A +L M + LQP++ TY +++ L + +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 241 AVYEEMVSSGCTPD 254
+ E ++G D
Sbjct: 512 KLVGEFEAAGLNAD 525
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P+ +N ++ + N L A A ++ M S + PD T+ L+ HCKA
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LFQEM+ KG+S V TY+++I ++K+ + ++ +M+ +GL + F
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 LVDVYGKSGR 130
D K R
Sbjct: 707 FSDTKYKGKR 716
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 127/256 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S + PD Y +I F + + A F M + + PD+VT+ LI+ +CKAG+
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + M Q G SP V+TY +I+ + + D ++LL M GL PN T+ +
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ KSG +A++ + ++ G Y L++AY + G D+A ++M +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P+++ N L+N F + +L +M + P+ T+ +L+K +
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 241 AVYEEMVSSGCTPDRK 256
A+Y++M S G PD K
Sbjct: 617 AIYKDMCSRGVGPDGK 632
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 118/253 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++P+ + Y +I + L A F M+ + I PDTV + TLID CK G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + F EM + +P VLTY +I+ + L M +GL P++VTFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+G DA + G P Y LI+ + G D A +M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P++ NS++N + EA ++ + L D VTYTTLM A + + K
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 241 AVYEEMVSSGCTP 253
+ +EM+ G P
Sbjct: 547 EILKEMLGKGLQP 559
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + +I+ + K + A M+ P+ VT+ TLID CK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A EL EM + G P + TYN ++N + ++ L+ ++ GL + VT+TT
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y KSG + A E L+ + G +PT +N L+N + G+ + M A+G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 181 LKPSLLALNSLINAF---------------------GED--------------RRDPEAF 205
+ P+ NSL+ + G D R EA+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ Q MK V TY+ L+K ++ KF + V+++M G D++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN++I + + A M + PD ++++T+++ +C+ G D+ +L + M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+KG P Y +I + K + + + M QG+LP+ V +TTL+D + K G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A + + S P Y A+I+ + Q G +A F +M +GL+P + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N + + +AF V +M + P+VVTYTTL+ L + + EM G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 253 PD 254
P+
Sbjct: 489 PN 490
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 15/249 (6%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI-----DCHCKAGYHDRAEE 66
F+ V++D F L A FE+ML+ + + N + DC+ A A
Sbjct: 181 FFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA----TAII 232
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+F+E + G V +YNI+I+ + + + LL M+ +G P+ ++++T+V+ Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+ G + + +EV+K G KP +Y ++I + +A AF +M +G+ P +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 187 ALNSLINAFGEDRRDPEAFAVLQY-MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+LI+ F + R D A + Y M D+ PDV+TYT ++ ++ + ++ E
Sbjct: 353 VYTTLIDGFCK-RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 246 MVSSGCTPD 254
M G PD
Sbjct: 412 MFCKGLEPD 420
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+ F + + ++N +I C+ G A L M+ KGY+P V++Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ D+V L+ M+ +GL PN+ + +++ + + + +A E + G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
+Y LI+ + +RG A F +M + + P +L ++I+ F + EA +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M L+PD VT+T L+ + V+ M+ +GC+P+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G PD Y+ +++ + +F LD E M + ++P++ + ++I C+
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEE F EM ++G P + Y +I+ + S M S+ + P+ +T+T
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A + + G +P + LIN Y + G A M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ +LI+ ++ A +L M + LQP++ TY +++ L + +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 241 AVYEEMVSSGCTPD 254
+ E ++G D
Sbjct: 512 KLVGEFEAAGLNAD 525
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P+ +N ++ + N L A A ++ M S + PD T+ L+ HCKA
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LFQEM+ KG+S V TY+++I ++K+ + ++ +M+ +GL + F
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 LVDVYGKSGR 130
D K R
Sbjct: 707 FSDTKYKGKR 716
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P + +++ F N AM+ ++++ P+ V +NT+ID C+ G + A
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++ + M++ G P V+TYN +I + W + +L+ M G+ P+ +TF+ L+DV
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
YGK G+ +A + + P YN+LIN GL D+A + ++G P+
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N+LIN + + +R + +L M + + D TY TL + + KF V
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLG 383
Query: 245 EMVSSGCTPD 254
MVS G PD
Sbjct: 384 RMVSCGVHPD 393
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++PD YN +I + M+ I PD +T++ LID + K G
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++ + EM Q+ +P ++TYN +IN + D+ +L + S+G PNAVT+ T
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ R +D ++ L V+ G YN L Y Q G A +M + G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + N L++ + + +A L+ ++++ ++TY ++K L + DK
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMR 269
++ + G +PD + LR R
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKR 478
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ D + + +ID F + L A++ +M+ P VT+ +L++ C A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L ++ GY P V+ YN +I+S+ + + + D+L M+ G+ P+ VT+ +L+
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
SG + + L + MG P ++ALI+ Y + G +A + +M + P+
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI---RVDKFHKVPA 241
++ NSLIN EA VL + P+ VTY TL+ RVD K+
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 242 V 242
V
Sbjct: 349 V 349
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K N + ++ F + I D ++ TLIDC C+ A +M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G+ P ++T+ ++N ++ + L+ ++ G PN V + T++D + G+ N
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
AL+ L+ +K MG +P YN+LI G + M G+ P ++ ++LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ +G++ + EA M + + P++VTY +L+ L + V +VS G
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 253 PD 254
P+
Sbjct: 322 PN 323
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 57 KAGYH----DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL 112
++G H + A LF +M + P ++ ++ ++ ++ K++ V L ++ G+
Sbjct: 52 RSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGIS 111
Query: 113 PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
+ +FTTL+D + + R + AL CL + +GF+P+ + +L+N + +A++
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL 171
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
++ G +P+++ N++I++ E + A VL++MK+ ++PDVVTY +L+ L
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 233 VDKFHKVPAVYEEMVSSGCTPD 254
+ + +M+ G +PD
Sbjct: 232 SGTWGVSARILSDMMRMGISPD 253
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 22 KFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVL 81
KFN A+ F M P V ++ L+ K ++ LF+ ++ G S +
Sbjct: 59 KFN---DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
++ +I+ + L +M G P+ VTF +LV+ + RF +A+ ++ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
+G++P +YN +I++ ++G + A++ + M G++P ++ NSLI
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ +L M + PDV+T++ L+ + + + Y EM+ P+
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S G P+ YN +I+ + K +D M M + + DT T+NTL +C+AG
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
AE++ M G P + T+NI+++ + K + L +Q + +T+ ++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-GL 181
K+ + DA L G P Y ++ ++ L +A +RKM E GL
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Query: 182 KP 183
P
Sbjct: 497 MP 498
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GV PD + +N+++D + A+ E + + +T+N +I CKA
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLP 113
+ A LF + KG SP V+TY M+ + + W + +L +MQ + GL+P
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 133/258 (51%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD + Y ++D K +D A+ + M SE P V +N LID CK G R +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
M KG P +TYN +I+ + + K D+ LL RM S +PN VT+ TL++ K
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
R DA+ L ++ G+ +Y+ LI+ + G +++A++ +RKM +G KP+++
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+ L++ + + EA +L M + P+ TY++LMK + + V++EM
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 248 SSGCTPDRKARAMLRSAL 265
+GC+ ++ ++L L
Sbjct: 460 KTGCSRNKFCYSVLIDGL 477
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ +N++I K +D A+ F M + PD T+ TL+D CK D A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
L EMQ +G SP + YN++I+ + + +V+ L+ M +G +PN VT+ TL+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
G+ + A+ LE + S P Y LIN ++ + AV M G +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ LI+ ++ + EA ++ + M E +P++V Y+ L+ L R K ++ +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 246 MVSSGCTPD 254
M++SGC P+
Sbjct: 423 MIASGCLPN 431
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P+ YN +I LD A++ ERM+S + P+ VT+ TLI+ K A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L M+++GY Y+++I+ + + K ++ L +M +G PN V ++ LVD
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ G+ N+A E L + + G P Y++L+ + + GL ++AV +++M G +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ LI+ R EA V M ++PD V Y++++K L + +Y
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 245 EMV 247
EM+
Sbjct: 527 EML 529
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S G P YNV+ID K L + M + P+ VT+NTLI C G
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+A L + M P +TY +IN + Q + LL+ M+ +G N ++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G+ +A+ + G KP +Y+ L++ + G ++A +M A G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+ +SL+ F + EA V + M + + Y+ L+ L V + +
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
V+ +M++ G PD A + + L
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
I P+ +++N +I CK + DRA E+F+ M ++ P TY +++ + +E+ D+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
LL MQS+G P+ V + L+D K G + ++ + G P YN LI+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
+G D+AV+ +M + P+ + +LIN + RR +A +L M+E +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
Y+ L+ L + K + +++ +M GC P+ ++L L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 38/257 (14%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G ++H Y+V+I K + AM+ + +M + +P+ V ++ L+D C+ G
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A+E+ L RM + G LPNA T+++
Sbjct: 413 PNEAKEI-----------------------------------LNRMIASGCLPNAYTYSS 437
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+G +A++ + + G Y+ LI+ G +A+ + KM G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYM---KENDLQPDVVTYTTLMKALIRVDKFH 237
+KP +A +S+I A + M +E QPDVVTY L+ L
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 238 KVPAVYEEMVSSGCTPD 254
+ + M+ GC PD
Sbjct: 558 RAVDLLNSMLDRGCDPD 574
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G ++ Y+V+ID + AM + +ML+ I+PDTV ++++I C G
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 61 HDRAEELFQEM---QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
D A +L+ EM ++ P V+TYNI+++ + Q+ + DLL M +G P+ +T
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 118 FTTLVD 123
T ++
Sbjct: 578 CNTFLN 583
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 132/254 (51%), Gaps = 1/254 (0%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG-YH 61
S+ QPD H Y+++I +F + D M + IRP+T+T+NTLID + KA +
Sbjct: 214 SHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ L Q + + P T N + + G + + + + + QS G+ PN TF L
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D YGKSG + +E ++ + T YN +I+A+ + G Q FR M +E +
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
PS + L SL+ A+G + + VL++++ +D++ D+V + L+ A R++KF ++
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 242 VYEEMVSSGCTPDR 255
V E M G PD+
Sbjct: 454 VLELMEKKGFKPDK 467
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 115/230 (50%), Gaps = 1/230 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
M+ G++P+ YN +ID +GK +T +ML E + +PD+ T N+ + G
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ E +++ Q G P + T+NI+++S G + ++S ++ MQ VT+
Sbjct: 307 QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYN 366
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++D +G++G +++S P+ +L+ AY + +D+ R +
Sbjct: 367 VVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENS 426
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
++ L+ N L++A+G + E VL+ M++ +PD +TY T++KA
Sbjct: 427 DIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 40/266 (15%)
Query: 27 DHAMATFERMLSEEI--RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG--------- 75
+ A+ FE +L E++ +P+ + LI K ++A ELFQEM +G
Sbjct: 131 ESAIQVFE-LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 76 -----YS----------------------PCVLTYNIMINSMGAQEKWDQVSDLLTRMQS 108
YS P V TY+I+I S +D+V DLL+ M+
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSD 167
QG+ PN +T+ TL+D YGK+ F + L ++L KP N+ + A+ G +
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 168 QAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
N + K + G++P++ N L++++G+ + AV++YM++ +VTY ++
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 228 KALIRVDKFHKVPAVYEEMVSSGCTP 253
A R ++ ++ M S P
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFP 395
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
+S+G++P+ +N+++D++GK A E M VT+N +ID +AG
Sbjct: 319 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 378
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ E LF+ MQ + P +T ++ + G K D++ +L +++ + + V F L
Sbjct: 379 KQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 438
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS 166
VD YG+ +F + LE+++ GFKP Y ++ AY G++
Sbjct: 439 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMT 483
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
EL +E Q Y P V Y +I +G ++ ++ +L M ++G + N +T LV Y
Sbjct: 138 ELLRE--QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 195
Query: 126 GKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+SGRF+ A LE +K S +P Y+ LI ++ Q D+ + M +G++P+
Sbjct: 196 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPN 255
Query: 185 LLALNSLINAFGEDRRDPEAFAVL-QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ N+LI+A+G+ + E + L Q + E+D +PD T + ++A + + Y
Sbjct: 256 TITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY 315
Query: 244 EEMVSSGCTPD 254
E+ SSG P+
Sbjct: 316 EKFQSSGIEPN 326
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YNV+ID FG+ L F M SE I P VT +L+ + +A D+ + + ++
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 424
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++ +N ++++ G EK+ ++ +L M+ +G P+ +T+ T+V Y SG
Sbjct: 425 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTT 484
Query: 133 DALECLEVLKSMG 145
E V++S+G
Sbjct: 485 HVKELHGVVESVG 497
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ +N +I N AMA +RM+++ +PD VT+ +++ CK G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L +M+Q P VL YN +I+ + + D +L M+++G+ PN VT+++
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ GR++DA L + P ++ALI+A+ + G +A + +M
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ PS++ +SLIN F R EA + ++M PDVVTY TL+K + + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 241 AVYEEMVSSG 250
V+ EM G
Sbjct: 417 EVFREMSQRG 426
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 131/265 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P Y+ +I+ F + LD A FE M+S+ PD VT+NTLI CK
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E+F+EM Q+G +TYNI+I + D ++ M S G+ PN +T+ T
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+G+ A+ E L+ +PT YN +I + G + + F ++ +G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP ++A N++I+ F EA A+ + MKE+ P+ Y TL++A +R
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EM S G D ++ + L
Sbjct: 592 ELIKEMRSCGFAGDASTIGLVTNML 616
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G QPD Y V+++ K D A +M ++ P + +NT+ID CK +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF+EM+ KG P V+TY+ +I+ + +W S LL+ M + + P+ TF+
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A + + + P+ Y++LIN + D+A F M ++
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N+LI F + +R E V + M + L + VTY L++ L +
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 241 AVYEEMVSSGCTPD 254
+++EMVS G P+
Sbjct: 452 EIFKEMVSDGVPPN 465
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 124/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G++P+ Y+ +I + A M+ +I PD T++ LID K G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L+ EM ++ P ++TY+ +IN ++ D+ + M S+ P+ VT+ T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K R + +E + G YN LI Q G D A F++M ++G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++ N+L++ ++ + +A V +Y++ + ++P + TY +++ + + K
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 241 AVYEEMVSSGCTPD 254
++ + G PD
Sbjct: 522 DLFCNLSLKGVKPD 535
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ + + Y+++I+ F + + L A+A +M+ P+ VT ++L++ +C +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M GY P +T+N +I+ + K + L+ RM ++G P+ VT+
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + A L ++ +P +YN +I+ + D A+N F++M +G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ +SLI+ R +A +L M E + PDV T++ L+ A ++ K +
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 241 AVYEEMVSSGCTP 253
+Y+EMV P
Sbjct: 347 KLYDEMVKRSIDP 359
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 119/242 (49%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K N D ++ E+M + I + T++ LI+C C+ A + +M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T + ++N ++ + L+ +M G PN VTF TL+ + +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + + G +P Y ++N +RG +D A N KM L+P +L N++I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + + +A + + M+ ++P+VVTY++L+ L ++ + +M+
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 253 PD 254
PD
Sbjct: 324 PD 325
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+A F M+ P + ++ L+ K D L ++MQ G TY+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + +L +M G PN VT ++L++ Y S R ++A+ ++ + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P +N LI+ + +A+ +M A+G +P L+ ++N + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+L M++ L+P V+ Y T++ L + +++EM + G P+ + L S L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + YN++I + D A F+ M+S+ + P+ +T+NTL+D CK G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A +F+ +Q+ P + TYNIMI M K + DL + +G+ P+ V + T
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A + +K G P YN LI A + G + + ++M + G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 181 LKPSLLALNSLINAFGEDRRD 201
+ + N + R D
Sbjct: 602 FAGDASTIGLVTNMLHDGRLD 622
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 92 AQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPT 151
++ K D L M P+ + F+ L+ K +F+ + E ++++G
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 152 MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
Y+ LIN + +R A+ KM G +P+++ L+SL+N + +R EA A++ M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 212 KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
QP+ VT+ TL+ L +K + A+ + MV+ GC PD
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 36/301 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++ + YN ++D + K N ++ F M + ++P T+N L+D + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKW-DQVSDLLTRMQSQGLLPNAVTFT 119
D E L +EM+ G P V +Y +I++ G +K D +D RM+ GL P++ ++T
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKP------------------------------- 148
L+ Y SG A E + G KP
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 149 ----TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
T YN L++ +A++GL +A + + + GL+PS++ N L+NA+ +D +
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+L+ M +L+PD +TY+T++ A +RV F + ++ MV SG PD ++ LR+
Sbjct: 610 PQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAI 669
Query: 265 L 265
L
Sbjct: 670 L 670
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 36/290 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV+ + + ++ +F + A+ M + IR +T+ +NTL+D + K+ +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E LF EM+ KG P TYNI++++ + + D V LL M+ GL PN ++T
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 121 LVDVYGKSGRFND-ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ YG++ + +D A + +K +G KP+ Y ALI+AY+ G ++A +F +M E
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 180 GLKPSL-----------------------------------LALNSLINAFGEDRRDPEA 204
G+KPS+ + N+L++ F + EA
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEA 574
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
V+ + LQP V+TY LM A R + K+P + +EM + PD
Sbjct: 575 RDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPD 624
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR-AEEL 67
D YN I D A +E M + PD VT LI KAG + E+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F++M +KG + ++ S + ++ + T M+ +G+ N + + TL+D Y K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
S + ++ G KP+ YN L++AYA+R D R+M GL+P++ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 188 LNSLINAFGEDRR--DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
LI+A+G ++ D A A L+ MK+ L+P +YT L+ A K A +EE
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 246 MVSSGCTPDRKARAMLRSALR 266
M G P + + A R
Sbjct: 511 MCKEGIKPSVETYTSVLDAFR 531
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD + +I+ F + N + A+ +M RPD V +NT+ID CK G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ELF M++ G +TYN ++ + +W + L+ M + ++PN +TFT
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++DV+ K G+F++A++ E + P YN+LIN G D+A M +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N+LIN F + +R E + + M + L D +TY T+++ + +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 241 AVYEEMVS 248
++ M S
Sbjct: 370 EIFSRMDS 377
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 135/309 (43%), Gaps = 38/309 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTL--------- 51
M+ G +PD YN +ID K ++ A+ F+RM + +R D VT+N+L
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 52 --------------------------IDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
ID K G A +L++EM ++ P V TYN
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + + D+ +L M ++G LP+ VT+ TL++ + KS R ++ + + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
YN +I Y Q G D A F +M + +P++ + L+ + R +A
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKAL 401
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ + M++++++ D+ TY ++ + ++ ++ + G PD + + S
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 266 RYMRQTLKS 274
RQ KS
Sbjct: 462 CRKRQWDKS 470
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 121/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ D + YN++I+ + + A++ +M+ PD VT ++LI+ C+
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L +M++ G+ P V+ YN +I+ + +L RM+ G+ +AVT+ +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV SGR++DA + + P + A+I+ + + G +A+ + +MT
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + NSLIN R EA +L M PDVVTY TL+ + + +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 241 AVYEEMVSSGCTPD 254
++ EM G D
Sbjct: 335 KLFREMAQRGLVGD 348
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 3/248 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ + +ID F K AM +E M + PD T+N+LI+ C G D A+
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++ M KG P V+TYN +IN ++ D+ + L M +GL+ + +T+ T++ Y
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++GR DA + E+ M +P Y+ L+ ++A+ F M ++ +
Sbjct: 360 FQAGR-PDAAQ--EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I+ + +A+ + + + L+PDVV+YTT++ R ++ K +Y +
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 246 MVSSGCTP 253
M G P
Sbjct: 477 MQEDGLLP 484
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
L+ + F +M+ P V ++ ++ K+ +D LF M+ G + +YNI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + ++ ++ +M G P+ VT ++L++ + + R DA++ + ++ MG
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
F+P +YN +I+ + GL + AV F +M +G++ + NSL+ R +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+++ M D+ P+V+T+T ++ ++ KF + +YEEM PD
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
D ++ F M I D ++N +I+C C+ A + +M + GY P V+T + +
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
IN + DL+++M+ G P+ V + T++D K G NDA+E + ++ G
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
+ YN+L+ G A R M + P+++ ++I+ F ++ + EA
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + M + PDV TY +L+ L + + + + MV+ GC PD
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G PD YN +I+ F K +D F M + DT+T+NT+I + +AG
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+E+F M + P + TY+I++ + + ++ L MQ + + T+
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G DA + L G KP Y +I+ + ++ D++ +RKM +G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 181 LKP 183
L P
Sbjct: 482 LLP 484
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NG++P + YN +++ +D A FE M S I+PD VT+NT+I +CKAG
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A E ++M+ +G+ +TY MI + A + L M +G+ F+
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G+ N+ E + G KP +Y LI+ YA+ G + A+ +M EG
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP ++ + ++N ++ R EA + + L + + Y++L+ L + + +
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 241 AVYEEMVSSGCTPD 254
++EEM GCT D
Sbjct: 453 RLFEEMSEKGCTRD 466
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 1/270 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+Q H ++++I K L+ FE M+ + +P+ + LID + K+G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A L M +G+ P V+TY++++N + + ++ D + GL N++ +++
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM-TAE 179
L+D GK+GR ++A E + G YNALI+A+ + D+A+ F++M E
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G ++ L++ ++ R+ EA + M + + P + L L K +
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSALRYMR 269
+ +E+ G D M+ + + R
Sbjct: 558 CKILDELAPMGVILDAACEDMINTLCKAGR 587
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G + D+ Y MI + +A ++ M + I+ ++ +I CK G
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +F+ M +KG P V Y ++I+ + LL RM +G P+ VT++
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K+GR +AL+ + G Y++LI+ + G D+A F +M+ +G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND-LQPDVVTYTTLMKALIRVDKFHKV 239
N+LI+AF + R+ EA A+ + M+E + V TYT L+ + + + +
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 240 PAVYEEMVSSGCTP 253
+++ M+ G TP
Sbjct: 523 LKLWDMMIDKGITP 536
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N +I +FGK ++ + + +M I P T+N L++ A + D AE +F+ M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
P ++TYN MI + + + L M+++G + +T+ T++ F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
+ + + G + P ++ +I + G ++ F M +G KP++ LI+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR-------VDKFH 237
+ + +A +L M + +PDVVTY+ ++ L + +D FH
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 35 RMLSEEIR----PDTVTW-NTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINS 89
R +S EI+ P TV+ N LI K G + ++++M++ G P + TYN ++N
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
+ + D + M+S + P+ VT+ T++ Y K+G+ A+E L +++ G +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
Y +I A V +++M +G++ A + +I ++ + E + V +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M +P+V YT L+ + + M+ G PD
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%)
Query: 50 TLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ 109
+L+D A DR + E+++ + V N +I S G +++ + +M+
Sbjct: 157 SLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN 216
Query: 110 GLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
G+ P T+ L++ + + A EV++S KP YN +I Y + G + +A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 170 VNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+ R M G + + ++I A D A+ Q M E +Q ++ ++
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 230 LIRVDKFHKVPAVYEEMVSSGCTPD 254
L + K ++ V+E M+ G P+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPN 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N + +LVDV + + +K F T + NALI ++ + G+ ++ + +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
RKM G++P+L N L+N A V + M+ ++PD+VTY T++K +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 234 DKFHKVPAVYEEMVSSGCTPDR 255
+ K +M + G D+
Sbjct: 271 GQTQKAMEKLRDMETRGHEADK 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTV-TWNTLIDCHCKAG 59
M G D + YN +ID F K +D A+A F+RM EE TV T+ L+ K
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
++ A +L+ M KG +P + + + K + +L + G++ +A
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-E 576
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
+++ K+GR +A + + + G + + +INA + G +D A+
Sbjct: 577 DMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAM 627
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 136/254 (53%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + PDR+ Y+ +I +FGK D A++ ++M + + D V ++ LI+ +
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +A +F +++ G +P ++ YN MIN G + + + L+ M G+LPN V+++T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ VY ++ +F +AL +K + T N +I+ Y Q + +A F +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P++++ N+++ +GE EA + + M+ D++ +VVTY T++K + + K
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 241 AVYEEMVSSGCTPD 254
+ +EM S G P+
Sbjct: 421 NLVQEMQSRGIEPN 434
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N+MID +G+ + + A F + +I P+ V++NT++ + +A A LF+ MQ+
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
K V+TYN MI G + ++ ++L+ MQS+G+ PNA+T++T++ ++GK+G+ +
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A + L+S G + +Y +I AY + GL A +++ E P + + I
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRETAIT 509
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ R EA V + E+ D+ + ++ R ++ V V+E+M ++G P
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFP 569
Query: 254 DRKARAMLRSALRYMRQTLKS 274
D AM+ +A R+ K+
Sbjct: 570 DSNVIAMVLNAYGKQREFEKA 590
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 129/266 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K +G+ PD YN MI+ +GK A + M + P+TV+++TL+ + +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F EM++ + + T NIMI+ G + + L ++ + PN V++ T
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ VYG++ F +A+ +++ + YN +I Y + ++A N ++M + G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+ + +++I+ +G+ + A + Q ++ + ++ D V Y T++ A RV
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALR 266
+ E+ P A +L A R
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGR 516
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
++ Y+P V YN+++ ++ +++D L M+ + L P+ T++TL+ +GK G F
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD--QAVNAFRKMTAEGLKPSLLALN 189
+ AL L+ ++ +Y+ LI R L D +A++ F ++ G+ P L+A N
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIEL--SRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
S+IN +G+ + EA +++ M E + P+ V+Y+TL+ + KF + +V+ EM
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 250 GCTPD 254
C D
Sbjct: 325 NCALD 329
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P YNV++ + D A F+ M + PD T++TLI K G D A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
Q+M+Q S ++ Y+ +I + + + +R++ G+ P+ V + ++++VYGK
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ F +A ++ + G P Y+ L++ Y + +A++ F +M L
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
N +I+ +G+ EA + +++ D++P+VV+Y T+++
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++S+GV+ D+ Y MI + + + HA +R+L E PD + T I KAG
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRETAITILAKAGR 516
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +F++ + G + + MIN +++ V ++ +M++ G P++
Sbjct: 517 TEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM 576
Query: 121 LVDVYGKSGRFNDA 134
+++ YGK F A
Sbjct: 577 VLNAYGKQREFEKA 590
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/190 (17%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG-LLPNAVTFTTLVDVYGKSGRFNDA 134
Y L+ M++ + + W + LL + + P+ + ++ ++ +F+ A
Sbjct: 115 YKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIA 174
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
+ ++ P Y+ LI ++ + G+ D A++ +KM + + L+ ++LI
Sbjct: 175 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 234
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+A ++ +K + + PD+V Y +++ + F + + +EM +G P+
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 255 RKARAMLRSA 264
+ + L S
Sbjct: 295 TVSYSTLLSV 304
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S + P+ YN +I + K N + AM +ML ++ PD VT+N+LID C++G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L M +G P TY MI+S+ ++ ++ DL ++ +G+ PN V +T
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y K+G+ ++A LE + S P +NALI+ G +A KM G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P++ LI+ +D A++ Q M + +PD TYTT ++ R +
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 241 AVYEEMVSSGCTPD 254
+ +M +G +PD
Sbjct: 658 DMMAKMRENGVSPD 671
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ PD Y +I + + LD A F M + R + V + LI C A D A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+LF +M+ P V TY ++I S+ E+ + +L+ M+ G+ PN T+T L+D
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+F A E L + G P YNALIN Y +RG+ + AV+ M + L P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
N LI + + +A VL M E + PDVVTY +L+ R F +
Sbjct: 428 TRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 245 EMVSSGCTPDR 255
M G PD+
Sbjct: 487 LMNDRGLVPDQ 497
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 18/275 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD+ Y MID+ K ++ A F+ + + + P+ V + LID +CKAG
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A + ++M K P LT+N +I+ + A K + + L +M GL P T T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G F+ A + + S G KP Y I Y + G A + KM G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD------ 234
+ P L +SLI +G+ + AF VL+ M++ +P T+ +L+K L+ +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 235 ------------KFHKVPAVYEEMVSSGCTPDRKA 257
+F V + E+MV TP+ K+
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + V P+ + YN M++ + K ++ A +++ + PD T+ +LI +C+
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++F EM KG + Y +I+ + + D+ DL +M+ P T+T
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ S R ++AL ++ ++ G KP Y LI++ + ++A +M +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+++ N+LIN + + +A V++ M+ L P+ TY L+K + + HK
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 241 AVYEEMVSSGCTPD 254
V +M+ PD
Sbjct: 448 GVLNKMLERKVLPD 461
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN ++++ +F +D + ML +++ P+ T+N +++ +CK G + A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G P TY +I ++ D + M +G N V +T L+ + R +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A++ +K PT Y LI + +A+N ++M G+KP++ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + +A +L M E L P+V+TY L+ + V E M S +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 253 PDRKA 257
P+ +
Sbjct: 426 PNTRT 430
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%)
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
Y + YN ++NS+ D++ + M + PN T+ +V+ Y K G +A
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
+ + + G P Y +LI Y QR D A F +M +G + + +A LI+
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
RR EA + MK+++ P V TYT L+K+L ++ + + +EM +G P+
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 256 KARAMLRSAL 265
+L +L
Sbjct: 359 HTYTVLIDSL 368
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 60/314 (19%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+QP ++I K DHA + F++MLS +PD T+ T I +C+ G A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD- 123
E++ +M++ G SP + TY+ +I G + + D+L RM+ G P+ TF +L+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 124 ----VYGKSG-------------RFNDALECLEVL------------------------- 141
YGK F+ +E LE +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 142 -----------KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
++ G P+ ++NAL++ + ++A M G P L +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE---EMV 247
LI + +V Q + + D + + ++ V K V A YE M
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG---VGKQGLVEAFYELFNVME 893
Query: 248 SSGCTPDRKARAML 261
+GC + ++L
Sbjct: 894 KNGCKFSSQTYSLL 907
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 100 SDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG--------FKPTPT 151
+ LLT + + G + V F + + DAL L++ + M +K
Sbjct: 127 ASLLTLLINNGYV--GVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 184
Query: 152 MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
YN L+N+ A+ GL D+ + +M + + P++ N ++N + + EA + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 212 KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
E L PD TYT+L+ + V+ EM GC + A L L R+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 1 MKSNGVQPDRHFYNVMID-----TFGKFN------C-------LDHAMATFERMLSEEIR 42
M+ G +P +H + +I +GK C D + E+M+ +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ-KGYSPCVLTYNIMINSMGAQEKWDQVSD 101
P+ ++ LI C+ G AE++F MQ+ +G SP L +N +++ +K ++ +
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
++ M G LP + L+ K G + L G+ + +I+
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 162 QRGLSDQAVNAFRKMTAEGLKPS 184
++GL + F M G K S
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFS 900
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERM-LSEEIRPDTVTWNTLIDCHCKAG 59
M + V P+ Y +I + L A F+ M +E I P + +N L+ C CK
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
H+ A ++ +M G+ P + + ++I + + + ++ + + + G + + +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
++D GK G E V++ G K + Y+ LI
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 133/252 (52%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G PD++ +N +++ K + HA+ + ML E PD T+N++I CK G
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A E+ +M + SP +TYN +I+++ + + ++ ++L + S+G+LP+ TF +L+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ A+E E ++S G +P YN LI++ +G D+A+N ++M G
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
S++ N+LI+ F + + EA + M+ + + + VTY TL+ L + + +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 244 EEMVSSGCTPDR 255
++M+ G PD+
Sbjct: 529 DQMIMEGQKPDK 540
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD + YN +I K + A+ ++M++ + P+TVT+NTLI CK
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A EL + + KG P V T+N +I + +L M+S+G P+ T+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D G+ ++AL L+ ++ G + YN LI+ + + + +A F +M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + + N+LI+ + RR +A ++ M +PD TY +L+ R K
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ + M S+GC PD L S L
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGL 585
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P+ YN +I T K N ++ A + S+ I PD T+N+LI C
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H A ELF+EM+ KG P TYN++I+S+ ++ K D+ ++L +M+ G + +T+ T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K+ + +A E + ++ G YN LI+ + + A +M EG
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
KP NSL+ F +A ++Q M N +PD+VTY TL+ L + +
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S G +PD YN++ID+ LD A+ ++M +T+NTLID CKA
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEE+F EM+ G S +TYN +I+ + + + + L+ +M +G P+ T+ +
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G A + ++ + S G +P Y LI+ + G + A R + +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE-NDLQPDVVTYTTLMKALIRVDK-FHK 238
+ + A N +I R+ EA + + M E N+ PD V+Y + + L +
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 239 VPAVYEEMVSSGCTPDRKARAMLRSAL 265
E++ G P+ + ML L
Sbjct: 666 AVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++PD +NV+I + + L A+ E M S + PD T+ T++ + + G D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVD 123
+ ++M + G S ++ N++++ + + + + + M +Q G P+ TF TLV+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K+G A+E ++V+ G+ P YN++I+ + G +AV +M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ + N+LI+ ++ + EA + + + + PDV T+ +L++ L ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 244 EEMVSSGCTPDRKARAMLRSAL 265
EEM S GC PD ML +L
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSL 445
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCL--DH--AMATFERMLSEEIRPDTVTWNTLIDCHC 56
+ S G+ PD +N +I CL +H AM FE M S+ PD T+N LID C
Sbjct: 391 LTSKGILPDVCTFNSLIQGL----CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
G D A + ++M+ G + V+TYN +I+ K + ++ M+ G+ N+V
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ TL+D KS R DA + ++ + G KP YN+L+ + + G +A + + M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ--YMKENDLQPDVVTYTTLMKALIRVD 234
T+ G +P ++ +LI+ + R A +L+ MK +L P Y +++ L R
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKR 624
Query: 235 KFHKVPAVYEEMVSSGCTP 253
K + ++ EM+ P
Sbjct: 625 KTTEAINLFREMLEQNEAP 643
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+ PD + ++ + + LD A+ E+M+ V+ N ++ CK G
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 61 HDRAEELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ A QEM Q G+ P T+N ++N + +++ M +G P+ T+
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++ K G +A+E L+ + + P YN LI+ + ++A R +T++
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+ P + NSLI R A + + M+ +PD TY L+ +L K +
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 240 PAVYEEMVSSGC 251
+ ++M SGC
Sbjct: 455 LNMLKQMELSGC 466
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 113 PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
P + ++ G+SG F+D + LE +KS + + + LI +YAQ L D+ ++
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 173 FRKMTAE-GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
M E GLKP N ++N + M ++PDV T+ L+KAL
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 232 RVDKFHKVPAVYEEMVSSGCTPDRK 256
R + + E+M S G PD K
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEK 225
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 136/254 (53%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++++G++PD YN ++ + + LD A+ FE M + +PD T+N +I + + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE LF E++ KG+ P +TYN ++ + + ++V ++ +MQ G + +T+ T
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 121 LVDVYGKSGRFNDALECLEVLKSM-GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ +YGK G+ + AL+ + +K + G P Y LI++ + + +A +M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+KP+L ++LI + + + EA M + +PD + Y+ ++ L+R ++ K
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 240 PAVYEEMVSSGCTP 253
+Y +M+S G TP
Sbjct: 528 WGLYRDMISDGHTP 541
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+++ QPD YN MI +G+ A F + + PD VT+N+L+ +
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS-QGLLPNAVTFT 119
++ +E++Q+MQ+ G+ +TYN +I+ G Q + D L M+ G P+A+T+T
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+D GK+ R +A + + +G KPT Y+ALI YA+ G ++A + F M
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G KP LA + +++ +A+ + + M + P Y ++ L++ ++ +
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDI 562
Query: 240 PAVYEEM 246
+M
Sbjct: 563 QKTIRDM 569
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCL--DHAMATFERMLSEEIRPDTVTWNTLIDCHCKA 58
M+ G PD +N +I+ K L + A+ + + + +RPD +T+NTL+ +
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
D A ++F++M+ P + TYN MI+ G + L ++ +G P+AVT+
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+L+ + + E + ++ MGF YN +I+ Y ++G D A+ ++ M
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 179 -EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
G P + LI++ G+ R EA A++ M + ++P + TY+ L+ + K
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+ + M+ SG PD A +++ L +T K+
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 6/258 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G PD +N ++ + + C + A A F M+ + P + N L+ C G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG- 836
Query: 61 HDRAEELF---QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
R EEL+ +E+Q G+ + +M+++ +V + + M++ G LP
Sbjct: 837 --RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRL 894
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ ++++ K R DA + ++ FK ++N+++ Y + V ++++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
GL+P N+LI + DRR E + ++Q M+ L P + TY +L+ A +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 238 KVPAVYEEMVSSGCTPDR 255
+ ++EE++S G DR
Sbjct: 1015 QAEQLFEELLSKGLKLDR 1032
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 134/271 (49%), Gaps = 6/271 (2%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTV-TWNTLIDCHCKAGYHDRAEE 66
P+ ++ G++N A+ F R +E D V +N ++ + ++G +A+E
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVYNAMMGVYSRSGKFSKAQE 246
Query: 67 LFQEMQQKGYSPCVLTYNIMINS--MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L M+Q+G P ++++N +IN+ + +LL +++ GL P+A+T+ TL+
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA 306
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ + A++ E +++ +P YNA+I+ Y + GL+ +A F ++ +G P
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPD 366
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ NSL+ AF +R + V Q M++ D +TY T++ + + +Y+
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Query: 245 EMVS-SGCTPDRKARAMLRSALRYMRQTLKS 274
+M SG PD +L +L +T+++
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G P Y +MI+ K + A M + + WN+++ +
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + +++Q +++ G P TYN +I + ++ L+ +M++ GL P T+ +
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +GK A + E L S G K + Y+ ++ G +A + M G
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+L ++ L+ ++ EA VL +K+ +++ + Y++++ A +R ++
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGI 1122
Query: 241 AVYEEMVSSGCTPDRK 256
EM G PD +
Sbjct: 1123 ERLLEMKKEGLEPDHR 1138
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
+N M+ + + ++R+ + PD T+NTLI +C+ + L Q+M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ G P + TY +I++ G Q+ +Q L + S+GL + + T++ + SG
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+ A + L+++K+ G +PT + L+ +Y+ G +A + ++ + L +S+
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
I+A+ + L MK+ L+PD +T ++A
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 100/213 (46%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
+M+D F + + + M + P + +I+ CK AE + EM++
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
+ + +N M+ A E + + + R++ GL P+ T+ TL+ +Y + R +
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
++ ++++G P Y +LI+A+ ++ +QA F ++ ++GLK ++++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
+ D +A +LQ MK ++P + T LM
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ P Y +I FGK CL+ A FE +LS+ ++ D ++T++ +G
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+AE+L Q M+ G P + T ++++ S + + +L+ ++ + + +++
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
++D Y +S +N +E L +K G +P ++ + A
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 50 TLIDCHCKAGYHDRAEELFQEMQQKGYS-PCVLTYNIMINSMGAQEKWDQVSDLLTRMQS 108
+++ +CK G+ + A ++ + + KG+ C Y +I + G Q+ W + ++ ++
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ 780
Query: 109 QGLLPNAVTFTTLVDVYGK-----------------------------------SGRFND 133
G P+ T+ +L+ Y + GR +
Sbjct: 781 SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
+E L+ MGFK + + +++A+A+ G + + M A G P++ +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ +R +A ++ M+E + + ++ + +++K ++ + K VY+ + +G P
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 254 D 254
D
Sbjct: 961 D 961
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G PD Y V+ID+ GK N A A ML I+P T++ LI + KAG +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
AE+ F M + G P L Y++M++ + + + L M S G P+ + ++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 124 VYGKSGRFNDALECLEVLKSM-GFKPTPTMYNALINAYAQRG-LSDQAVNAFRKMTAEGL 181
K R +D + + ++ + G P I++ +G D A + G
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLE------ISSVLVKGECFDLAARQLKVAITNGY 605
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+ L S++ ++ R EAF +L+++KE+
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEH 638
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G++PD YN +I + + + ++M + + P T+ +LI K
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++AE+LF+E+ KG Y+ M+ + LL M++ G+ P T
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y SG +A + L LK + T Y+++I+AY + + + +M EG
Sbjct: 1073 LMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
L+P + A + E +L+ +++
Sbjct: 1133 LEPDHRIWTCFVRAASFSKEKIEVMLLLKALED 1165
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 51 LIDCHCKAGYHDRA-EELFQEMQQKGYSPCVLT-YNIMINSMGAQEKWDQVSDLLTRMQS 108
LI HCK A +E F + G+ T Y +++ A E + + S + + ++
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRL 709
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFK-PTPTMYNALINAYAQRGLSD 167
G + ++V VY K G A + + ++ GF MY +I AY ++ L
Sbjct: 710 SGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQ 769
Query: 168 QAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
+A + + G P L NSL++A+ + A A+ M + P V + L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 228 KALIRVDKFHKVPAVYEEMVSSG 250
AL + ++ V EE+ G
Sbjct: 830 HALCVDGRLEELYVVVEELQDMG 852
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 121/250 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G QP+ Y +++ K AM +M I+ D V ++ +ID CK G D A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
LF EM+ KG + ++TYNI+I +WD + LL M + + PN VTF+ L+D
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K G+ +A E + + G P Y +LI+ + + D+A M ++G P+
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N LIN + + R + + + M + D VTY TL++ + K + +++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 245 EMVSSGCTPD 254
EMVS P+
Sbjct: 463 EMVSRKVPPN 472
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 127/249 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ D Y+++ID K LD+A F M + I + +T+N LI C AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +L ++M ++ +P V+T++++I+S + K + +L M +G+ P+ +T+T+
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K + A + ++++ S G P +N LIN Y + D + FRKM+ G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + N+LI F E + A + Q M + P++VTY L+ L + K
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 241 AVYEEMVSS 249
++E++ S
Sbjct: 494 EIFEKIEKS 502
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + + ++MI+ F + L A + +++ P+T+T++TLI+ C G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL M + G+ P ++T N ++N + K + L+ +M G PNAVT+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++V KSG+ A+E L ++ K Y+ +I+ + G D A N F +M +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ +++ N LI F R + +L+ M + + P+VVT++ L+ + ++ K +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 241 AVYEEMVSSGCTPD 254
+++EM+ G PD
Sbjct: 354 ELHKEMIHRGIAPD 367
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ ++V+ID+F K L A + M+ I PDT+T+ +LID CK + D+A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++ M KG P + T+NI+IN + D +L +M +G++ + VT+ TL+ +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ G+ N A E + + S P Y L++ G S++A+ F K+ ++ +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I+ + +A+ + + ++P V TY ++ L + + ++ +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 246 MVSSGCTPD 254
M G PD
Sbjct: 569 MEEDGHAPD 577
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + YN++I F D M+ +I P+ VT++ LID K G
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEEL +EM +G +P +TY +I+ + D+ + ++ M S+G PN TF
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ R +D LE + G YN LI + + G + A F++M +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+++ L++ ++ +A + + ++++ ++ D+ Y ++ + K
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + G P K ++ L
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGL 553
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 120/261 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y +ID F K N LD A + M+S+ P+ T+N LI+ +CKA
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ELF++M +G +TYN +I K + +L M S+ + PN VT+
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G ALE E ++ + +YN +I+ D A + F + +G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP + N +I + EA + + M+E+ PD TY L++A + K
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+ EE+ G + D M+
Sbjct: 599 KLIEELKRCGFSVDASTIKMV 619
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G P+ +N++I+ + K N +D + F +M + DTVT+NTLI C+ G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A+ELFQEM + P ++TY I+++ + + ++ ++ +++ + + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + +DA + L G KP YN +I ++G +A FRKM +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
P N LI A D ++ +++ +K D T ++ L
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
D A+ F M+ P + ++ L K +D L ++M+ KG + + T +IM
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
IN K + ++ G PN +TF+TL++ GR ++ALE ++ + MG
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
KP N L+N G +A+ KM G +P+ + ++N + + A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M+E +++ D V Y+ ++ L + ++ EM G T +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV D YN +I F + L+ A F+ M+S ++ P+ VT+ L+D C G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A E+F+++++ + YNI+I+ M K D DL + +G+ P T+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G ++A ++ G P YN LI A+ G + ++V ++ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 181 LKPSLLALNSLINAFGEDR 199
+ +I+ + R
Sbjct: 609 FSVDASTIKMVIDMLSDGR 627
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
L+Y + S K D DL M LP + F+ L K+ +++ L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
++ G + +IN + + A +A K+ G +P+ + ++LIN + R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 201 DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
EA ++ M E +PD++T TL+ L K + + ++MV GC P+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 130/258 (50%), Gaps = 2/258 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD + ++ID K L +AM F++M + IR D VT+NTL+D K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+E++ +M K P ++Y+I++N++ ++ + + M S+ + P + +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE- 179
++ Y +SG +D LE + S GF P YN LI + + +A +KM E
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 180 -GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
GL P + NS+++ F + EA VL+ M E + PD TYT ++ + D +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 239 VPAVYEEMVSSGCTPDRK 256
+++EM+ G +PD K
Sbjct: 711 AFRIHDEMLQRGFSPDDK 728
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S V PD ++ M+ F + LD A+ F + + PD V + LI +C+ G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L EM Q+G + V+TYN +++ + ++ + L M + L P++ T T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G +A+E + +K + YN L++ + + G D A + M ++
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+ ++ + L+NA EAF V M +++P V+ +++K R
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 241 AVYEEMVSSGCTPD 254
+ E+M+S G PD
Sbjct: 606 SFLEKMISEGFVPD 619
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 39/302 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ GV PD YN +I + ++ A M + P T+NT+I+ CK G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQV--SDLLTRMQSQGLLPNAVTF 118
++RA+E+F EM + G SP TY ++ M A +K D V + + M+S+ ++P+ V F
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLL--MEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN------- 171
++++ ++ +SG + AL +K G P +Y LI Y ++G+ A+N
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 172 ----------------------------AFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
F +MT L P L LI+ +
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
A + Q MKE ++ DVVTY TL+ +V ++ +MVS P + ++L +
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 264 AL 265
AL
Sbjct: 559 AL 560
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G+ PD Y ++I + + + AM ML + D VT+NT++ CK
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++LF EM ++ P T I+I+ +L +M+ + + + VT+ T
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +GK G + A E + S PTP Y+ L+NA +G +A + +M ++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP+++ NS+I + + + L+ M PD ++Y TL+ +R + K
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 241 AVYEEMVS--SGCTPD 254
+ ++M G PD
Sbjct: 641 GLVKKMEEEQGGLVPD 656
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++++I T+ + L A F + S+ N LI + G+ + A ++QE+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G V T NIM+N++ K ++V L+++Q +G+ P+ VT+ TL+ Y G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A E + + GF P YN +IN + G ++A F +M GL P SL+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ E V M+ D+ PD+V ++++M R K + + +G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 253 PD 254
PD
Sbjct: 408 PD 409
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++S G N +I + + ++ A ++ + + + T N +++ CK G
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ ++Q+KG P ++TYN +I++ ++ ++ +L+ M +G P T+ T
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ K G++ A E + G P T Y +L+ ++G + F M +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P L+ +S+++ F +A +KE L PD V YT L++ R
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 241 AVYEEMVSSGCTPD 254
+ EM+ GC D
Sbjct: 431 NLRNEMLQQGCAMD 444
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N F L+ Y ++ + +A E +L+S GF + NALI + + G + A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA---- 229
++++ G+ ++ LN ++NA +D + + L ++E + PD+VTY TL+ A
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 230 -------------------------------LIRVDKFHKVPAVYEEMVSSGCTPDRKA- 257
L + K+ + V+ EM+ SG +PD
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 258 RAMLRSALR 266
R++L A +
Sbjct: 344 RSLLMEACK 352
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 128/251 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ + Y V+I+ K +E+M + + P+ T+N +++ CK G A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++F EM+++G S ++TYN +I + + K ++ + ++ +M+S G+ PN +T+ TL+D
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ G+ AL LKS G P+ YN L++ + ++G + A ++M G+KPS
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ LI+ F +A + M+E L PDV TY+ L+ + ++ +++
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 245 EMVSSGCTPDR 255
MV C P+
Sbjct: 468 SMVEKNCEPNE 478
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 139/264 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV + YN +I + L+ A ++M S+ I P+ +T+NTLID C G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A L ++++ +G SP ++TYNI+++ + + ++ M+ +G+ P+ VT+T
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + +S A++ ++ +G P Y+ LI+ + +G ++A F+ M +
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P+ + N++I + ++ A +L+ M+E +L P+V +Y +++ L + K +
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 241 AVYEEMVSSGCTPDRKARAMLRSA 264
+ E+M+ SG P +++ A
Sbjct: 534 RLVEKMIDSGIDPSTSILSLISRA 557
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P+ Y +ID K ++ A F M + + T+ LI+ K G +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E++++MQ+ G P + TYN ++N + + + M+ +G+ N VT+ TL+
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ + N+A + ++ +KS G P YN LI+ + G +A++ R + + GL PS
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
L+ N L++ F A +++ M+E ++P VTYT L+ R D K +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 245 EMVSSGCTPDRKARAML 261
M G PD ++L
Sbjct: 433 SMEELGLVPDVHTYSVL 449
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG P + +N ++ + + + F S+ + D ++ LI C+AG
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGE 178
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+++ +L E+ + G+SP V+ Y +I+ + + ++ DL M GL+ N T+T
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ K+G E E ++ G P YN ++N + G + A F +M G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ +++ N+LI + + EA V+ MK + + P+++TY TL+ V K K
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ ++ S G +P +L S
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGF 383
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
Y V+I+++ + L+ +++ F M+ P + +N L+ + ++ F E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ K V ++ I+I + ++ DLL + G PN V +TTL+D K G
Sbjct: 156 KSKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A + + +G Y LIN + G+ Q + KM +G+ P+L N +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+N +D R +AF V M+E + ++VTY TL+ L R K ++ V ++M S G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 252 TPD 254
P+
Sbjct: 335 NPN 337
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 139/260 (53%), Gaps = 10/260 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE---IRPDTVTWNTLIDCHCK 57
M+S+G +P Y +++ TF + + A FE +L E+ ++PD ++ +I + K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
AG +++A ++F M KG +TYN + M + + +VS + +MQ + P+ V+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVS 316
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ L+ YG++ R +AL E + G +PT YN L++A+A G+ +QA F+ M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 178 AEGLKPSLLALNSLINAF--GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+ + P L + ++++A+ D E F + +K + +P++VTY TL+K + +
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKF--FKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 236 FHKVPAVYEEMVSSGCTPDR 255
K+ VYE+M SG ++
Sbjct: 435 VEKMMEVYEKMRLSGIKANQ 454
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 6/218 (2%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
LI + K G + AE + + + G +P V++Y ++ S G K + + RMQS G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVL---KSMGFKPTPTMYNALINAYAQRGLSD 167
P+A+T+ ++ + + +F +A E E L K KP MY+ +I Y + G +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 168 QAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
+A F M +G+ S + NSL++ + E + M+ +D+QPDVV+Y L+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 228 KALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
KA R + + +V+EEM+ +G P KA +L A
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + +QPD Y ++I +G+ + A++ FE ML +RP +N L+D +G
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A+ +F+ M++ P + +Y M+++ + R++ G PN VT+ T
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ +E E ++ G K T+ +++A + A+ +++M + G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 181 LKPSLLALNSLIN 193
+ P A N L++
Sbjct: 485 VPPDQKAKNVLLS 497
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 33 FERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGA 92
+++M +I+PD V++ LI + +A + A +F+EM G P YNI++++
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
+Q + M+ + P+ ++TT++ Y + A + + +K GF+P
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y LI YA+ ++ + + KM G+K + L ++++A G
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG---------------- 465
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
R F Y+EM S G PD+KA+ +L S
Sbjct: 466 -------------------RCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 94 EKWDQVSDLLTRMQSQGLLP-NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
+KW+ VS++L ++ Q + + F L+ YGK G FN A L VL MG P
Sbjct: 117 KKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 176
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM- 211
Y AL+ +Y + G + A FR+M + G +PS + ++ F E + EA V + +
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 236
Query: 212 --KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
K++ L+PD Y ++ + + K V+ MV G
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 278
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 6/257 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G +P+ + Y +++D F K +D A M ++ ++P+TV +N LI CK
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+F+EM +KG P V T+N +I+ + ++ LL M S+G++ N VT+ T
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTP---TMYNALINAYAQRGLSDQAVNAFRKMT 177
L++ + + G +A + ++ M F+ +P YN+LI + G D+A + F KM
Sbjct: 535 LINAFLRRGEIKEARK---LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+G PS ++ N LIN EA + M PD+VT+ +L+ L R +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 238 KVPAVYEEMVSSGCTPD 254
++ ++ + G PD
Sbjct: 652 DGLTMFRKLQAEGIPPD 668
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 1/260 (0%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERML-SEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+P+ +N +I F LD A A M+ S I PD T+N+LI + K G A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E+ +M+ KG P V +Y I+++ K D+ ++L M + GL PN V F L+ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
K R +A+E + G KP +N+LI+ + A+ R M +EG+ +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ N+LINAF EA ++ M D +TY +L+K L R + K +++E+
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 246 MVSSGCTPDRKARAMLRSAL 265
M+ G P + +L + L
Sbjct: 590 MLRDGHAPSNISCNILINGL 609
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G P+ Y +I + K N ++ A+ E M PD T+N +I CK
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ++ M +G++P +TY ++N + + D DL R+ P V F T
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 121 LVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ + GR +DA L +++ S G P YN+LI Y + GL A+ M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G KP++ + L++ F + + EA+ VL M + L+P+ V + L+ A + + +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
++ EM GC PD L S L
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGL 504
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 130/317 (41%), Gaps = 67/317 (21%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S + P + V++ F N +D A++ M P++V + TLI K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT--- 117
+ A +L +EM G P T+N +I + ++ ++ + ++ RM +G P+ +T
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 118 ----------------------------FTTLVDVYGKSGRFNDALECL-EVLKSMGFKP 148
F TL+ + GR +DA L +++ S G P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 149 TPTMYNALINAYAQRGLS-----------------------------------DQAVNAF 173
YN+LI Y + GL D+A N
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
+M+A+GLKP+ + N LI+AF ++ R PEA + + M +PDV T+ +L+ L V
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 234 DKFHKVPAVYEEMVSSG 250
D+ + +M+S G
Sbjct: 508 DEIKHALWLLRDMISEG 524
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P YNV+++ NC A F MLS +I P T+ ++ C D A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
L ++M + G P + Y +I+S+ + ++ LL M G +P+A TF ++
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K R N+A + + + GF P Y L+N + G D A + F ++ KP ++
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIV 354
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N+LI+ F R +A AVL M + + PDV TY +L+ + V +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 246 MVSSGCTPDRKARAML 261
M + GC P+ + +L
Sbjct: 415 MRNKGCKPNVYSYTIL 430
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 66 ELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
ELF Q GY Y ++I +GA ++ + LL +M+ +G++ F +++
Sbjct: 96 ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155
Query: 125 YGKSGRFNDALEC-LEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K+G LE+ +PT YN ++ A N F M + + P
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+L ++ AF A ++L+ M ++ P+ V Y TL+ +L + ++ ++ +
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 244 EEMVSSGCTPD 254
EEM GC PD
Sbjct: 276 EEMFLMGCVPD 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD +N +I+ + ++ + F ++ +E I PDTVT+NTL+ CK G+
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQ 98
A L E + G+ P T++I++ S+ QE D+
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 139/260 (53%), Gaps = 10/260 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE---IRPDTVTWNTLIDCHCK 57
M+S+G +P Y +++ TF + + A FE +L E+ ++PD ++ +I + K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
AG +++A ++F M KG +TYN + M + + +VS + +MQ + P+ V+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ L+ YG++ R +AL E + G +PT YN L++A+A G+ +QA F+ M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 178 AEGLKPSLLALNSLINAF--GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+ + P L + ++++A+ D E F + +K + +P++VTY TL+K + +
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKF--FKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 236 FHKVPAVYEEMVSSGCTPDR 255
K+ VYE+M SG ++
Sbjct: 442 VEKMMEVYEKMRLSGIKANQ 461
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 6/218 (2%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
LI + K G + AE + + + G +P V++Y ++ S G K + + RMQS G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVL---KSMGFKPTPTMYNALINAYAQRGLSD 167
P+A+T+ ++ + + +F +A E E L K KP MY+ +I Y + G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 168 QAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
+A F M +G+ S + NSL++ + E + M+ +D+QPDVV+Y L+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 228 KALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
KA R + + +V+EEM+ +G P KA +L A
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + +QPD Y ++I +G+ + A++ FE ML +RP +N L+D +G
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A+ +F+ M++ P + +Y M+++ + R++ G PN VT+ T
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ +E E ++ G K T+ +++A + A+ +++M + G
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 181 LKPSLLALNSLIN 193
+ P A N L++
Sbjct: 492 VPPDQKAKNVLLS 504
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 33 FERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGA 92
+++M +I+PD V++ LI + +A + A +F+EM G P YNI++++
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
+Q + M+ + P+ ++TT++ Y + A + + +K GF+P
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y LI YA+ ++ + + KM G+K + L ++++A G
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG---------------- 472
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
R F Y+EM S G PD+KA+ +L S
Sbjct: 473 -------------------RCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 504
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 94 EKWDQVSDLLTRMQSQGLLP-NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
+KW+ VS++L ++ Q + + F L+ YGK G FN A L VL MG P
Sbjct: 124 KKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 183
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM- 211
Y AL+ +Y + G + A FR+M + G +PS + ++ F E + EA V + +
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 243
Query: 212 --KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
K++ L+PD Y ++ + + K V+ MV G
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 121/261 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P + ++ F N + A + M+ P+ V +NTLID CK G + A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL EM++KG V+TYN ++ + +W + +L M + + P+ VTFT L+DV
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K G ++A E + + P YN++IN G A F M ++G P+
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ N+LI+ F + R E + Q M D+ TY TL+ +V K ++
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 245 EMVSSGCTPDRKARAMLRSAL 265
MVS TPD +L L
Sbjct: 376 WMVSRRVTPDIITHCILLHGL 396
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G +P+ YN +ID K L+ A+ M + + D VT+NTL+ C +G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + ++M ++ +P V+T+ +I+ Q D+ +L M + PN VT+ +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ GR DA + +++ S G P YN LI+ + + + D+ + F++M+ EG
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM----------KAL 230
+ N+LI+ + + + A + +M + PD++T+ L+ AL
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 231 IRVD------KFHKVPAVYEEMVSSGCTPDRKARA 259
++ D K+ + A Y M+ C D+ +A
Sbjct: 407 VKFDDMRESEKYIGIVA-YNIMIHGLCKADKVEKA 440
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 112/261 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ D YN ++ A M+ I PD VT+ LID K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+EL++EM Q P +TYN +IN + + M S+G PN VT+ T
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K ++ ++ + + GF YN LI+ Y Q G A++ F M +
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ L++ + A M+E++ +V Y ++ L + DK K
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 241 AVYEEMVSSGCTPDRKARAML 261
++ + G PD + ++
Sbjct: 442 ELFCRLPVEGVKPDARTYTIM 462
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ D + + ++I F + + L A++ +M+ P VT+ +L+ C
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L M + GY P V+ YN +I+ + + + +LL M+ +GL + VT+ T
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ SGR++DA L + P + ALI+ + ++G D+A +++M
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+ + NS+IN R +A M P+VVTY TL+ + +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 241 AVYEEMVSSGCTPD 254
+++ M G D
Sbjct: 337 KLFQRMSCEGFNAD 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD + +ID F K LD A ++ M+ + P+ VT+N++I+ C G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++ F M KG P V+TYN +I+ D+ L RM +G + T+ T
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y + G+ AL+ + S P + L++ G + A+ F M
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
++A N +I+ + + +A+ + + ++PD TYT ++ L +
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+ A A F M+ + P V + L+ ++ Q+M+ G S + ++ I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I+ + +L +M G P+ VTF +L+ + R DA + ++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++P +YN LI+ + G + A+ +M +GL ++ N+L+ R +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M + + PDVVT+T L+ ++ + +Y+EM+ S P+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + V P+ YN +I+ L A TF+ M S+ P+ VT+NTLI CK
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +LFQ M +G++ + TYN +I+ K D+ M S+ + P+ +T
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +G AL + ++ YN +I+ + ++A F ++ EG
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
+KP +I ++ EA +++ MKE +
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN 171
LP+ V FT L+ R+ + + ++ G + LI+ + + A++
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
KM G +PS++ SL++ F R +AF+++ M ++ +P+VV Y TL+ L
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 232 RVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRY 267
+ + + + EM G D L + L Y
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S GV+P + Y V++ ++M + + ++N +IDC CKA +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A EMQ +G SP ++T+N ++ + +V +L ++ G P+ +TF+ ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ ++ DA +C + + G +P YN LI + G +D++V F KM GL
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P L A N+ I +F + R+ +A +L+ M L+PD TY+TL+KAL + + +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 243 YEEMVSSGCTPDRKARAML 261
+ + GC PD + ++
Sbjct: 623 FSSIERHGCVPDSYTKRLV 641
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 70/320 (21%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++P YN +ID K N LD A F++M S+ +PD T+N LI CK G D A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV-- 122
L ++M+Q+G P V TY I+I+ + D+ L M+ + L PN T T V
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 123 --------------------DVYGKSGRFNDALECL----------EVLKSM---GFKPT 149
D + ++ L CL + L+ + G+ P
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 150 PTMYNA----------------LINAYAQRG----------LSDQAVNA---------FR 174
+ +NA + + + RG L +NA +
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+M +GL S+ + N++I+ + RR A L M++ + P++VT+ T +
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
KV V E+++ G PD
Sbjct: 475 DVKKVHGVLEKLLVHGFKPD 494
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ P+ +N + + + E++L +PD +T++ +I+C C+A
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + F+EM + G P +TYNI+I S + D+ L +M+ GL P+ +
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + K + A E L+ + +G KP Y+ LI A ++ G +A F + G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 181 LKP 183
P
Sbjct: 631 CVP 633
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G+ + YN +ID K +++A M I P+ VT+NT + + G
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + +++ G+ P V+T++++IN + ++ D M G+ PN +T+
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +G + +++ +K G P YNA I ++ + +A + M G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
LKP ++LI A E R+ EA + ++ + PD T
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAE--ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
PD+ T+N + C K HD E +F +G P Y +++ ++ +++ +
Sbjct: 353 PDSSTFNAAMSCLLKG--HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
L +M GLL + ++ ++D K+ R +A L ++ G P +N ++ Y
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
+ RG + K+ G KP ++ + +IN + +AF + M E ++P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+TY L+++ + ++ +M +G +PD A + MR+ K+
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 10/280 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G + V+I ++G+ + F ++ ++P T +N +ID K+
Sbjct: 136 IRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNS 195
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A FQ+M+ G P TYNI+I+ + + D+ L+ +M+ +G PN T+T
Sbjct: 196 LDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTI 255
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + +GR ++AL+ LE+++ P ++ + +A +
Sbjct: 256 LIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKD 315
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++++ + E L+ + E PD T+ M L++ +
Sbjct: 316 SNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETC 375
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL----------RYMRQ 270
+++ VS G P +L AL RY++Q
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+LL ++ G + L+ +G+ G + + +G KP+ +YNA+I+A
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
+ D A F++M ++G KP N LI+ + EA +++ M++ +P+V
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 221 VTYTTLMKALI---RVDK 235
TYT L+ + RVD+
Sbjct: 251 FTYTILIDGFLIAGRVDE 268
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GV Y +I+ +G+ + ++ +RM +E+I P +T+NT+I+ + G
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 61 H-DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ LF EM+ +G P ++TYN ++++ + D+ + M G++P+ T++
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
LV+ +GK R + L + S G P T YN L+ AYA+ G +A+ F +M A
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G P+ + L+N FG+ R + + MK ++ PD TY L++ F +V
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 240 PAVYEEMVSSGCTPD 254
++ +MV PD
Sbjct: 407 VTLFHDMVEENIEPD 421
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y+ +++TFGK L+ M S PD ++N L++ + K+G
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F +MQ G +P TY++++N G ++D V L M+S P+A T+
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++V+G+ G F + + + +P Y +I A + GL + A + MTA
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ PS A +I AFG+ EA M E P + T+ +L+ + R +
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 241 AVYEEMVSSGCTPDR 255
A+ +V SG +R
Sbjct: 513 AILSRLVDSGIPRNR 527
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNC-LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
MK+ + P YN +I+ + + + F M E I+PD VT+NTL+ G
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D AE +F+ M G P + TY+ ++ + G + ++V DLL M S G LP+ ++
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ Y KSG +A+ +++ G P Y+ L+N + Q G D F +M +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P N LI FGE E + M E +++PD+ TY ++ A +
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 240 PAVYEEMVSSGCTPDRKA 257
+ + M ++ P KA
Sbjct: 442 RKILQYMTANDIVPSSKA 459
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G PD YNV+++ + K + AM F +M + P+ T++ L++ ++G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D +LF EM+ P TYNI+I G + +V L M + + P+ T+
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ GK G DA + L+ + + P+ Y +I A+ Q L ++A+ AF M G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
PS+ +SL+ +F E+ A+L + ++ + + T+ ++A + KF +
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMR 269
Y +M S C PD + + S + R
Sbjct: 548 KTYVDMEKSRCDPDERTLEAVLSVYSFAR 576
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+QPD YN ++ D A F M I PD T++ L++ K
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ +L EM G P + +YN+++ + + + +MQ+ G PNA T++
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++++G+SGR++D + +KS P YN LI + + G + V F M E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P + +I A G+ +A +LQYM ND+ P YT +++A + + +
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 241 AVYEEMVSSGCTP 253
+ M G P
Sbjct: 478 VAFNTMHEVGSNP 490
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 42 RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
+P+ + +I + G D+ E+F EM +G S V +Y +IN+ G +++ +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSG-RFNDALECLEVLKSMGFKPTPTMYNALINAY 160
LL RM+++ + P+ +T+ T+++ + G + L ++ G +P YN L++A
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
A RGL D+A FR M G+ P L + L+ FG+ RR + +L M PD+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+Y L++A + + V+ +M ++GCTP+ ++L
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS+ PD YN++I+ FG+ + F M+ E I PD T+ +I K G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H+ A ++ Q M P Y +I + G +++ M G P+ TF +
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G ++ L L G +NA I AY Q G ++AV + M
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L ++++ + R E + MK +D+ P ++ Y ++ + +++ V
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 241 AVYEEMVSS 249
+ EEM+S+
Sbjct: 618 ELLEEMLSN 626
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G+ +R +N I+ + + + A+ T+ M PD T ++ + A D
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
E F+EM+ P ++ Y +M+ G E+WD V++LL M L N V+ +
Sbjct: 581 CREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM-----LSNRVS--NIHQ 633
Query: 124 VYGK--SGRFNDALE------CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
V G+ G ++D L+ L S G YNAL++A G ++A +
Sbjct: 634 VIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNE 693
Query: 176 MTAEGLKPSLLALNSLI 192
T GL P L N L+
Sbjct: 694 ATKRGLFPELFRKNKLV 710
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 124/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QPD Y +++ K D A+ +M + +I + V ++T+ID CK +
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM+ KG P V+TY+ +I+ + +W S LL+ M + + PN VTF+
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ A + E + P Y++LIN + +A M +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+++ N+LIN F + +R + + + M + L + VTYTTL+ +
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 241 AVYEEMVSSGCTPD 254
V+++MVS G P+
Sbjct: 449 MVFKQMVSVGVHPN 462
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ GV+P+ Y+ +I + A M+ +I P+ VT++ LID K G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+AE+L++EM ++ P + TY+ +IN ++ + +L M + LPN VT+ T
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K+ R + +E + G Y LI+ + Q D A F++M + G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++L N L++ ++ + +A V +Y++ + ++PD+ TY +++ + + K+ K+
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW-KMG 517
Query: 241 AVY 243
+Y
Sbjct: 518 GIY 520
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + +I N A+A +RM+ +PD VT+ +++ CK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L +M+ V+ Y+ +I+S+ D +L T M+++G+ PN +T+++L+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
GR++DA L + P ++ALI+A+ ++G +A + +M + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +SLIN F R EA +L+ M D P+VVTY TL+ + + K ++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 245 EMVSSG 250
EM G
Sbjct: 418 EMSQRG 423
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 128/254 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ ++ + Y+ +ID+ K+ D A+ F M ++ +RP+ +T+++LI C C G
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M ++ +P ++T++ +I++ + K + L M + + PN T+++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + R +A + LE++ P YN LIN + + D+ + FR+M+ G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + + +LI+ F + R A V + M + P+++TY L+ L + K K
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 241 AVYEEMVSSGCTPD 254
V+E + S PD
Sbjct: 484 VVFEYLQRSTMEPD 497
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 131/254 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + + YN++I+ F + + L A+A +M+ PD VT N+L++ C
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P +T+ +I+ + K + L+ RM +G P+ VT+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V+ K G + AL L +++ + +Y+ +I++ + D A+N F +M +G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ +SLI+ R +A +L M E + P++VT++ L+ A ++ K K
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 241 AVYEEMVSSGCTPD 254
+YEEM+ P+
Sbjct: 344 KLYEEMIKRSIDPN 357
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 126/253 (49%), Gaps = 6/253 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD N +++ F N + A+A ++M+ +PDTVT+ TLI H++A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH---GLFLHNKA 199
Query: 65 EE---LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
E L M Q+G P ++TY ++N + + D +LL +M++ + N V ++T+
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D K +DAL +++ G +P Y++LI+ G A M +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+L+ ++LI+AF + + +A + + M + + P++ TY++L+ +D+ +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 242 VYEEMVSSGCTPD 254
+ E M+ C P+
Sbjct: 380 MLELMIRKDCLPN 392
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 120/242 (49%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K N D ++ E+M I + T+N LI+C C+ A L +M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ GY P ++T N ++N + L+ +M G P+ VTFTTL+ + +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ + G +P Y A++N +RG +D A+N KM A ++ +++ +++I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + R + +A + M+ ++P+V+TY++L+ L ++ + +M+
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 253 PD 254
P+
Sbjct: 321 PN 322
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M P + ++ L+ K D ++M+ G S + TYNI
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN + LL +M G P+ VT +L++ + R +DA+ ++ + MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+KP + LI+ + +AV +M G +P L+ +++N + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+L M+ ++ +VV Y+T++ +L + ++ EM + G P+ + L S L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G+ ++ YN +I+ + LD TFE M+ P+TVT+N L+D + KA
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ELF ++ G V++YN +I + G + + +S + MQ G + + T
Sbjct: 715 FKKVNELFLLAKRHGVVD-VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D YGK + L+ +K P YN +IN Y ++G D+ + +++ G
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
L P L + N+LI A+G EA +++ M+ ++ PD VTYT L+ AL R D+F
Sbjct: 834 LGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
+KS+GV DR +++++ + K L+ A + E M + +I PD + ++ + K
Sbjct: 584 LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCD 643
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D+ + L+ +++ G YN +IN D++S M G PN VTF
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN 703
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+DVYGK+ F E + K G + YN +I AY + +A + M +
Sbjct: 704 VLLDVYGKAKLFKKVNELFLLAKRHGVVDVIS-YNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G SL A N+L++A+G+D++ + ++L+ MK++ PD TY ++ +V
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 240 PAVYEEMVSSGCTPD 254
V +E+ SG PD
Sbjct: 823 ADVLKELKESGLGPD 837
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 128/261 (49%), Gaps = 1/261 (0%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ PD + + M+ + K + D + R+ I + +N +I+C +A D
Sbjct: 625 IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELS 684
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
F+EM + G++P +T+N++++ G + + +V++L + G++ + +++ T++ Y
Sbjct: 685 GTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAY 743
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
GK+ + + ++ ++ GF + YN L++AY + ++ + ++M P
Sbjct: 744 GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDH 803
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +IN +GE E VL+ +KE+ L PD+ +Y TL+KA + + +E
Sbjct: 804 YTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKE 863
Query: 246 MVSSGCTPDRKARAMLRSALR 266
M PD+ L +ALR
Sbjct: 864 MRGRNIIPDKVTYTNLVTALR 884
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y+ MI + + D A + M + +R W +++ + + G + AE + M+
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G+SP ++ YN +I G K + L R+ + GL P+ ++ ++++ +G++ +
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A + LK G+KP LIN A+ G D A+ MT G + S + L ++
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIIL 460
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
A+ + + VL+ N ++ + ++++L+ A ++
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVK 500
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 116/246 (47%), Gaps = 8/246 (3%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLS-EEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
Y++++ G+ D A + + E + +NT+I K G A + F M
Sbjct: 177 YSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMM 236
Query: 72 QQKGYSPCVLTYNIMINSMGA-QEKW--DQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
+ G P V T ++ MG Q+ W ++ + M+ G++ + +++++ +Y +
Sbjct: 237 LEFGVRPNVATIGML---MGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRL 292
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
++ A E ++++K + + ++NAY+Q+G + A + M A G P+++A
Sbjct: 293 RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAY 352
Query: 189 NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
N+LI +G+ + A + + L+PD +Y ++++ R D + + Y+E+
Sbjct: 353 NTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR 412
Query: 249 SGCTPD 254
G P+
Sbjct: 413 CGYKPN 418
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +G YN ++D +GK ++ + +RM PD T+N +I+ + + G+
Sbjct: 759 MQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGW 818
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ++ +E+++ G P + +YN +I + G ++ L+ M+ + ++P+ VT+T
Sbjct: 819 IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTN 878
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF 146
LV ++ F +A++ +K MG
Sbjct: 879 LVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 1/245 (0%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
Q +N +I K + A F ML +RP+ T L+ + K + AE
Sbjct: 207 QKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEF 266
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
F M++ G C Y+ MI +D+ +++ M+ + + +++ Y
Sbjct: 267 AFSHMRKFGI-VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYS 325
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+ G+ A L +++ GF P YN LI Y + + A F ++ GL+P
Sbjct: 326 QQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDET 385
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ S+I +G EA Q +K +P+ TL+ + E+M
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 247 VSSGC 251
GC
Sbjct: 446 TGIGC 450
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 38/291 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + V+ + VM++ + + ++ A + M + P+ + +NTLI + K
Sbjct: 305 MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFK 364
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A+ LF + G P +Y MI G + +++ ++ G PN+ T
Sbjct: 365 MEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFT 424
Query: 121 LVDVYGKSGRFNDALECLEVLKSMG----------------------------------F 146
L+++ K G + A++ +E + +G
Sbjct: 425 LINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHI 484
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFR--KMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
+ T +++L+ AY + G+ D + R K + L L LI + E + +A
Sbjct: 485 RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHL--LICSCKESGQLTDA 542
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ + E+D + ++ +T++ + +F + +Y + SSG DR
Sbjct: 543 VKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDR 593
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 111/258 (43%), Gaps = 4/258 (1%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
+ H Y+++I + + L A+ + + + + +T+ID + G AE+L+
Sbjct: 522 ESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLY 581
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVDVYGK 127
++ G + ++I++ ++ +L M Q ++P+ F ++ +Y K
Sbjct: 582 LNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQK 641
Query: 128 SGRFNDALECLEV-LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
D L+ L ++ G MYN +IN A+ D+ F +M G P+ +
Sbjct: 642 CD-LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N L++ +G+ + + + K + + DV++Y T++ A + + + + + M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 247 VSSGCTPDRKARAMLRSA 264
G + +A L A
Sbjct: 760 QFDGFSVSLEAYNTLLDA 777
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 121/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD YN +++ + L+ + + +LS + +TVT+NTL+ C Y
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D EE+ M Q Y P V+TYNI+IN + + D +M Q LP+ VT+ T
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G +DA+E L +LK+ P YN++I+ A++GL +A+ + +M G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + SLI F EA VL+ TY +++ L + +
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 241 AVYEEMVSSGCTPD 254
V E M++ GC PD
Sbjct: 510 EVVEIMLTGGCKPD 523
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD YN +I + + A+ ++ L P +T+ L++ C+
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA E+ ++M +G P ++TYN ++N + ++V+ ++ + S GL N VT+ T
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +++ E L ++ + PT YN LIN + L +A++ F +M +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ N+++ A ++ +A +L +K P ++TY +++ L + K
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+Y +M+ +G PD R L
Sbjct: 440 ELYHQMLDAGIFPDDITRRSL 460
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ + + LD AM M+ PDT+T+N +I CK G+ A L ++M G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
P V+TYN +I M +Q G P +T+T LV++ + A+
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
E LE + G P YN+L+N +RG ++ + + + + GL+ + + N+L+++
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
E +L M + P V+TY L+ L + + + +M+ C PD
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN++I+ K L A+ F +ML ++ PD VT+NT++ K G D A EL ++
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
P ++TYN +I+ + + + +L +M G+ P+ +T +L+ + ++
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A + L+ + G + Y +I ++ + A+ M G KP +++
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Query: 193 NAFGEDRRDPEA 204
E EA
Sbjct: 532 KGVEEMGMGSEA 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D T N ++ C G A +L + M + P + + ++ + ++ D+ +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
M G +P+ +T+ ++ K G AL LE + G P YN +I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G ++QA+ ++ G P ++ L+ A VL+ M PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSG 250
+L+ R +V +V + ++S G
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHG 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD YN ++ K +D A+ + + P +T+N++ID K G +A EL
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+ +M G P +T +I ++ +L ++G T+ ++ K
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK 501
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
A+E +E++ + G KP T+Y A++ + G+ +AV
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
T N +++++ + K L+ M +P+ + + LV + + + A+ L V+
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
G P YN +I ++G A+ M+ G P ++ N++I +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+A + +N P ++TYT L++ + R + V E+M GC PD
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K+ P YN +ID K + A+ + +ML I PD +T +LI C+A
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ++ +E +G TY ++I + +++ + +++ M + G P+ +T
Sbjct: 470 VEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTA 529
Query: 121 LVDVYGKSGRFNDAL 135
+V + G ++A+
Sbjct: 530 IVKGVEEMGMGSEAV 544
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 138/273 (50%), Gaps = 1/273 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++PD Y+ +ID + K L F + L + ++ D V +++ ID + K+G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +++ M +G SP V+TY I+I + + + + ++ +G+ P+ VT+++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G E + MG+ P +Y L++ +++GL A+ KM +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ +++ NSLI+ + R EA V + M ++PDV T+TT+M+ I + +
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL-RYMRQTL 272
++ M G PD A L A ++M+ T+
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ Y ++I + + A + ++L + P VT+++LID CK G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
L+++M + GY P V+ Y ++++ + Q +M Q + N V F +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + + RF++AL+ ++ G KP + ++ G ++A+ F +M G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P LA +LI+AF + + + M+ N + D+ ++ L + +
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 241 AVYEEMVSSGCTPD 254
+ ++ PD
Sbjct: 622 KFFNNLIEGKMEPD 635
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ N + D NV+I K + ++ A F ++ ++ PD VT+NT+I +C
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AE +F+ ++ + P +T I+I+ + D + + M +G PNAVT+
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + KS + + E ++ G P+ Y+ +I+ +RG D+A N F +
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
L P ++A LI + + R EA + ++M N ++PD
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++PD Y +ID F K + F+ M +I D N +I K + A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ F + + P ++TYN MI + + D+ + ++ PN VT T L+ V
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K+ + A+ ++ G KP Y L++ +++ + + F +M +G+ PS
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+++ + +I+ + R EA + + L PDVV Y L++ +V + + +YE
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 245 EMVSSGCTPD 254
M+ +G PD
Sbjct: 801 HMLRNGVKPD 810
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y V++D K + HAM +ML + IR + V +N+LID C+
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++F+ M G P V T+ ++ + + ++ L RM GL P+A+ + T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K + L+ ++++ + N +I+ + + A F +
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P ++ N++I + RR EA + + +K P+ VT T L+ L + +
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 241 AVYEEMVSSGCTPD 254
++ M G P+
Sbjct: 692 RMFSIMAEKGSKPN 705
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + ++ L+ A+ F RM + PD + + TLID CK
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+LF MQ+ S + N++I+ + + + S + + P+ VT+ T
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y R ++A E+LK F P LI+ + D A+ F M +G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP+ + L++ F + +F + + M+E + P +V+Y+ ++ L + + +
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 241 AVYEEMVSSGCTPDRKARAML 261
++ + + + PD A A+L
Sbjct: 762 NIFHQAIDAKLLPDVVAYAIL 782
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A L + G +P V+T+ +IN + + D+ DL M+ +G+ P+ + ++TL+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K+G + G K ++++ I+ Y + G A +++M +G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ LI +D R EAF + + + ++P +VTY++L+ + A+Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 244 EEMVSSGCTPDRKARAMLRSAL 265
E+M+ G PD +L L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGL 471
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
L++C C+ G D+A E+F Q G + M+NS+ ++ D ++D ++ G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 111 LLPNAVTFTTLV-DVYGKSGRFNDALE----------------CLEVLKSM--------- 144
+ P+ V+ V D G AL+ C +VLK +
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 145 ---------GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
G P + LIN + +RG D+A + F+ M G++P L+A ++LI+ +
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ + ++ DVV +++ + ++ VY+ M+ G +P+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 256 KARAMLRSAL 265
+L L
Sbjct: 392 VTYTILIKGL 401
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 3/263 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++PD +N++I F K D A A + M E PD VT+ + ++ +CK G R
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E+ +EM++ G +P V+TY I+++S+G ++ + + +M+ G +P+A +++L+ +
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM---TAEGLK 182
K+GRF DA E E + + G + +YN +I+A + A+ ++M E
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P++ L+ ++ +L +M +ND+ DV TY L++ L K +
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 243 YEEMVSSGCTPDRKARAMLRSAL 265
+EE V G P ML L
Sbjct: 509 FEEAVRKGMVPRDSTCKMLVDEL 531
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCH---CKAGYHDRAEEL 67
H YN M+D GK D M E VT +T+ K+G +++A +
Sbjct: 167 HTYNAMVDVLGKCRNFDLMWELVNEMNKNE-ESKLVTLDTMSKVMRRLAKSGKYNKAVDA 225
Query: 68 FQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
F EM++ G + N +++++ + + ++ ++ + P+A TF L+ +
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFC 284
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K+ +F+DA ++++K F P Y + + AY + G + +M G P+++
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
++++ G+ ++ EA V + MKE+ PD Y++L+ L + +F ++E+M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 247 VSSGCTPDRKA-RAMLRSALRYMRQTL 272
+ G D M+ +AL + R +
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEM 431
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ--SQGLLPNAVTFTTLVDVYGKSGR 130
Q GY TYN M++ +G +D + +L+ M + L T + ++ KSG+
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 131 FNDALEC-LEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
+N A++ LE+ KS G K N+L++A + + A F K+ + +KP N
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFN 277
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
LI+ F + R+ +A A++ MK + PDVVTYT+ ++A + F +V + EEM +
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 250 GCTPD 254
GC P+
Sbjct: 338 GCNPN 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ NG P+ Y +++ + GK + A+ +E+M + PD +++LI K G
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM---QSQGLLPNAVT 117
A E+F++M +G VL YN MI++ + + LL RM + + PN T
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 118 FTTLV 122
+ L+
Sbjct: 454 YAPLL 458
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ NG++PD +N +I+ + LD AM FE+M +P T+NTLI + K G
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 61 HDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ + L M + + P T NI++ + Q K ++ +++ +MQS G+ P+ VTF
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 120 TLVDVYGKSGRFNDALE-CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
TL Y + G A + + + KP ++N Y + G ++A+ F +M
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G+ P+L NSLI F V+ M+E ++PDVVT++TLM A V +
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 239 VPAVYEEMVSSGCTPDRKARAML 261
+Y +M+ G PD A ++L
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSIL 642
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 40 EIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQV 99
++R T N LI+ G A +F + ++G+ P ++TY ++ ++ Q+ + +
Sbjct: 318 DVRSRTKLMNGLIE----RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL 373
Query: 100 SDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
L+++++ GL P+ + F +++ +SG + A++ E +K G KPT + +N LI
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 160 YAQRGLSDQAVNAFRKMTA-EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
Y + G +++ M E L+P+ N L+ A+ R+ EA+ ++ M+ ++P
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 219 DVVTYTTLMKALIRV 233
DVVT+ TL KA R+
Sbjct: 494 DVVTFNTLAKAYARI 508
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 10/272 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFN--CLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA 58
M+S GV+PD +N + + + C M RML +++P+ T T+++ +C+
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM-IIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G + A F M++ G P + +N +I D V +++ M+ G+ P+ VTF
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+TL++ + G D C E+ M G P ++ L YA+ G ++A +
Sbjct: 605 STLMNAWSSVG---DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVD 234
M G++P+++ +I+ + +A V + M L P++ TY TL+
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
+ K + ++M P RK ++ +
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLIADGWK 753
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++N + + + + + + +G P+ +T+TTLV + F+ L + ++ G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
KP ++NA+INA ++ G DQA+ F KM G KP+ N+LI +G+ + E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 206 AVLQYMKEND-LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L M ++ LQP+ T L++A K + + +M S G PD
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+PD ++ +++ + + + ML I PD ++ L + +AG
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMIN---SMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
++AE++ +M++ G P V+ Y +I+ S G +K QV + + GL PN T
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV--GLSPNLTT 709
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD 167
+ TL+ +G++ + A E L+ ++ PT + + + G+S+
Sbjct: 710 YETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T L++ + GR +A L G KP+ Y L+ A ++ ++ K+
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
GLKP + N++INA E +A + + MKE+ +P T+ TL+K ++ K +
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 239 VPAVYEEMV 247
+ + M+
Sbjct: 443 SSRLLDMML 451
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 132/266 (49%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI-RPDTVTWNTLIDCHCKAG 59
M G +PD YN +I F K N L+ A F+ + S + PD VT+ ++I +CKAG
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A L +M + G P +T+N++++ + ++ +M S G P+ VTFT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+D Y + G+ + E + + G P Y+ LINA +A ++ ++
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P N +I+ F + + EA +++ M++ +PD +T+T L+ + +
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
+++ +MV+ GC+PD+ + L S L
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P +NV++D + K + A +M+S PD VT+ +LID +C+ G +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L++EM +G P TY+I+IN++ + + + +LL ++ S+ ++P + ++D
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K+G+ N+A +E ++ KP + LI + +G +AV+ F KM A G P
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKE---NDLQP 218
+ ++SL++ + EA+ + Q ++ N++ P
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N +++T K + ++ AM F+ L + DT T+N LI C G ++A EL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTFTTLVDVYGKSGRFN 132
G P ++TYN +I + ++ S++ ++S + P+ VT+T+++ Y K+G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A L+ + +G PT +N L++ YA+ G A KM + G P ++ SLI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + + + F + + M + P+ TY+ L+ AL ++ K + ++ S
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 253 P 253
P
Sbjct: 415 P 415
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 1 MKSNGV-QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
+KS V PD Y MI + K + A + + ML I P VT+N L+D + KAG
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
AEE+ +M G P V+T+ +I+ + Q L M ++G+ PNA T++
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ R A E L L S P P MYN +I+ + + G ++A +M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
KP + LI R EA ++ M PD +T ++L+ L++
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
IR T+N L CKAG HD A ++F+ M+ G SP +++S + K +
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINA 159
LL +QS + + +L++ K R DA++ E L+ T T +N LI
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT-FNILIRG 215
Query: 160 YAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL-QP 218
G +++A+ M+ G +P ++ N+LI F + +A + + +K + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
DVVTYT+++ + K + ++ ++M+ G P
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P+ Y+++I+ N L A ++ S++I P +N +ID CKAG
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + +EM++K P +T+ I+I + + + + +M + G P+ +T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 121 LVDVYGKSGRFNDA 134
L+ K+G +A
Sbjct: 493 LLSCLLKAGMAKEA 506
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 132/266 (49%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI-RPDTVTWNTLIDCHCKAG 59
M G +PD YN +I F K N L+ A F+ + S + PD VT+ ++I +CKAG
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A L +M + G P +T+N++++ + ++ +M S G P+ VTFT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+D Y + G+ + E + + G P Y+ LINA +A ++ ++
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P N +I+ F + + EA +++ M++ +PD +T+T L+ + +
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
+++ +MV+ GC+PD+ + L S L
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P +NV++D + K + A +M+S PD VT+ +LID +C+ G +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L++EM +G P TY+I+IN++ + + + +LL ++ S+ ++P + ++D
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K+G+ N+A +E ++ KP + LI + +G +AV+ F KM A G P
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKE---NDLQP 218
+ ++SL++ + EA+ + Q ++ N++ P
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N +++T K + ++ AM F+ L + DT T+N LI C G ++A EL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTFTTLVDVYGKSGRFN 132
G P ++TYN +I + ++ S++ ++S + P+ VT+T+++ Y K+G+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A L+ + +G PT +N L++ YA+ G A KM + G P ++ SLI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + + + F + + M + P+ TY+ L+ AL ++ K + ++ S
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 253 P 253
P
Sbjct: 415 P 415
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 1 MKSNGV-QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
+KS V PD Y MI + K + A + + ML I P VT+N L+D + KAG
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
AEE+ +M G P V+T+ +I+ + Q L M ++G+ PNA T++
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ R A E L L S P P MYN +I+ + + G ++A +M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
KP + LI R EA ++ M PD +T ++L+ L++
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
IR T+N L CKAG HD A ++F+ M+ G SP +++S + K +
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINA 159
LL +QS + + +L++ K R DA++ E L+ T T +N LI
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT-FNILIRG 215
Query: 160 YAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL-QP 218
G +++A+ M+ G +P ++ N+LI F + +A + + +K + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
DVVTYT+++ + K + ++ ++M+ G P
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P+ Y+++I+ N L A ++ S++I P +N +ID CKAG
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + +EM++K P +T+ I+I + + + + +M + G P+ +T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 121 LVDVYGKSGRFNDA 134
L+ K+G +A
Sbjct: 493 LLSCLLKAGMAKEA 506
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 6/255 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ D Y +++ K A+ +M I+PD V ++ +ID CK G+
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H A+ LF EM +KG +P V TYN MI+ + +W LL M + + P+ +TF
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 121 LVDVYGKSGRFNDALE-CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ K G+ +A + C E+L F P YN++I + + D A + F M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P ++ N++I+ + +R E +L+ + L + TY TL+ VD +
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 240 PAVYEEMVSSGCTPD 254
+++EM+S G PD
Sbjct: 487 QDLFQEMISHGVCPD 501
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 4/249 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ PD YN MI F K N D A F+ M S PD VT+NT+ID +C+A D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+L +E+ ++G TYN +I+ + + DL M S G+ P+ +T L+ +
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++ + +ALE EV++ YN +I+ + D+A + F + G++P +
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I+ F +A + MK+N +PD TY TL++ ++ + K + E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 246 MVSSGCTPD 254
M S+G + D
Sbjct: 633 MRSNGFSGD 641
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 21/260 (8%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE------ 66
+N++I F + L +++TF ++ +PD VT+NTL+ C DR E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC---LEDRISEALALFG 200
Query: 67 ------------LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
LF +M + G +P V+T+N +IN + + + + + L+ +M +GL +
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
VT+ T+V+ K G AL L ++ KP +Y+A+I+ + G A F
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+M +G+ P++ N +I+ F R +A +L+ M E ++ PDV+T+ L+ A ++
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
K + + +EM+ PD
Sbjct: 381 KLFEAEKLCDEMLHRCIFPD 400
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+A F++M+ + P +T+NTLI+ C G A L +M KG V+TY ++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
M +LL++M+ + P+ V ++ ++D K G +DA + G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
YN +I+ + G A R M + P +L N+LI+A ++ + EA +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
M + PD VTY +++ + ++F +++ M S
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+GV PD N+++ F + L+ A+ FE + +I DTV +N +I CK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +LF + G P V TYN+MI+ + + L +M+ G P+ T+ T
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF 146
L+ K+G + ++E + ++S GF
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+GV+PD YNVMI F + + A F +M PD T+NTLI KAG D+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
+ EL EM+ G+S T + A+E +VSD
Sbjct: 626 SIELISEMRSNGFSGDAFTIKM------AEEIICRVSD 657
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 6/255 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ D Y +++ K A+ +M I+PD V ++ +ID CK G+
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H A+ LF EM +KG +P V TYN MI+ + +W LL M + + P+ +TF
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 121 LVDVYGKSGRFNDALE-CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ K G+ +A + C E+L F T T YN++I + + D A + F M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P ++ N++I+ + +R E +L+ + L + TY TL+ VD +
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 240 PAVYEEMVSSGCTPD 254
+++EM+S G PD
Sbjct: 487 QDLFQEMISHGVCPD 501
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 4/249 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ PD YN MI F K N D A F+ M S PD VT+NT+ID +C+A D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+L +E+ ++G TYN +I+ + + DL M S G+ P+ +T L+ +
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++ + +ALE EV++ YN +I+ + D+A + F + G++P +
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I+ F +A + MK+N +PD TY TL++ ++ + K + E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 246 MVSSGCTPD 254
M S+G + D
Sbjct: 633 MRSNGFSGD 641
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 21/260 (8%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE------ 66
+N++I F + L +++TF ++ +PD VT+NTL+ C DR E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC---LEDRISEALALFG 200
Query: 67 ------------LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
LF +M + G +P V+T+N +IN + + + + + L+ +M +GL +
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
VT+ T+V+ K G AL L ++ KP +Y+A+I+ + G A F
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+M +G+ P++ N +I+ F R +A +L+ M E ++ PDV+T+ L+ A ++
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
K + + +EM+ PD
Sbjct: 381 KLFEAEKLCDEMLHRCIFPD 400
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+A F++M+ + P +T+NTLI+ C G A L +M KG V+TY ++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
M +LL++M+ + P+ V ++ ++D K G +DA + G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
YN +I+ + G A R M + P +L N+LI+A ++ + EA +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
M + PD VTY +++ + ++F +++ M S
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ + YN +I F + + L+ A F+ M+S + PDT+T N L+ C+ + A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
ELF+ +Q + YNI+I+ M K D+ DL + G+ P+ T+ ++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ +DA +K G +P + YN LI + G D+++ +M + G
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 185 LLALNSLINAFGEDRRD 201
+ + + + R D
Sbjct: 642 AFTIKMVADLITDGRLD 658
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+GV PD N+++ F + L+ A+ FE + +I DTV +N +I CK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +LF + G P V TYN+MI+ + + L +M+ G P+ T+ T
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF 146
L+ K+G + ++E + ++S GF
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+GV+PD YNVMI F + + A F +M PD T+NTLI KAG D+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
+ EL EM+ G+S T ++ + + SD+L+
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQE 70
+ +N++++ F K + A F+ + ++P V++NTLI+ +CK G D L +
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
M++ P V TY+ +IN++ + K D L M +GL+PN V FTTL+ + ++G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
+ E + + S G +P +YN L+N + + G A N M GL+P + +
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
LI+ F A + + M +N ++ D V ++ L+ + + + EM+ +G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 251 CTPDRKARAMLRSAL 265
PD M+ A
Sbjct: 481 IKPDDVTYTMMMDAF 495
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + +PD Y+ +I+ K N +D A F+ M + P+ V + TLI H + G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +E +Q+M KG P ++ YN ++N +++ M +GL P+ +T+TT
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + + G ALE + + G + ++AL+ + G A A R+M G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP + +++AF + F +L+ M+ + P VVTY L+ L ++ +
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 241 AVYEEMVSSGCTPD 254
+ + M++ G PD
Sbjct: 541 MLLDAMLNIGVVPD 554
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 38/236 (16%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+QPD YN +++ F K L A + M+ +RPD +T+ TLID C+ G
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 61 HDRAEELFQEMQQKGYS-----------------------------------PCVLTYNI 85
+ A E+ +EM Q G P +TY +
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
M+++ + LL MQS G +P+ VT+ L++ K G+ +A L+ + ++G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
P YN L+ + + S + + + G+ L + S++N +D
Sbjct: 551 VVPDDITYNTLLEGHHRHANSSK---RYIQKPEIGIVADLASYKSIVNELDRASKD 603
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G +PD MID +G+ +D A++ ++R +E+ R D VT++TLI + +G
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D +++EM+ G P ++ YN +I+SMG ++ Q + + + G PN T+
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM-TAE 179
LV YG++ +DAL +K G T +YN L++ A D+A F+ M E
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P +SLI + R EA A L M+E +P + T++++ + + V
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDV 475
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSALRYMRQT 271
+++++ G TPD + L L M QT
Sbjct: 476 VRTFDQVLELGITPDDRFCGCL---LNVMTQT 504
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 6 VQPDRH--FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
++P R YNV + F K L+ + F+ ML I+PD T+ T+I C + G R
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A E F++M G P +T MI++ G D L R +++ +AVTF+TL+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+YG SG ++ L E +K++G KP +YN LI++ + QA ++ + G P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ +L+ A+G R +A A+ + MKE L V+ Y TL+ + ++
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 244 EEMVS-SGCTPD 254
++M + C PD
Sbjct: 409 QDMKNCETCDPD 420
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + +I + A+ FE+M S PD VT +ID + +AG
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L+ + + + +T++ +I G +D ++ M++ G+ PN V +
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D G++ R A + L + GF P + Y AL+ AY + D A+ +R+M +G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND-LQPDVVTYTTLMKALIRVDKFHKV 239
L +++ N+L++ ++R EAF + Q MK + PD T+++L+ + +
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 240 PAVYEEMVSSGCTP 253
A +M +G P
Sbjct: 441 EAALLQMREAGFEP 454
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 90/185 (48%)
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
V+ YN+ + + ++ L M +G+ P+ TFTT++ ++G A+E E
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
+ S G +P A+I+AY + G D A++ + + E + + ++LI +G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARA 259
+ + MK ++P++V Y L+ ++ R + + +Y++++++G TP+ A
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 260 MLRSA 264
L A
Sbjct: 355 ALVRA 359
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD YN +I K + A +M++E + PD+ T+NTLI +CK G A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E + + G+ P TY +I+ + + + ++ L +G+ PN + + TL+
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
G +A + + G P +N L+N + G A + M ++G P
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N LI+ + + A +L M +N + PDV TY +L+ L + KF V Y+
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 245 EMVSSGCTPDR-KARAMLRSALRYMR 269
MV GC P+ +L S RY +
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRK 546
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG PD+ Y +ID + A+A F L + I+P+ + +NTLI G
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A +L EM +KG P V T+NI++N + L+ M S+G P+ TF L+
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y + +ALE L+V+ G P YN+L+N + + + ++ M +G P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+L N L+ + R+ EA +L+ MK + PD VT+ TL+ +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 8/258 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI----RPDTVTWNTLIDCHC 56
M + G++PD + YN +I + C + ER++ + + PD T+ +LID C
Sbjct: 312 MVNEGLEPDSYTYNTLIAGY----CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
G +RA LF E KG P V+ YN +I + Q + + L M +GL+P
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
TF LV+ K G +DA ++V+ S G+ P +N LI+ Y+ + + A+ M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
G+ P + NSL+N + + + + M E P++ T+ L+++L R K
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 237 HKVPAVYEEMVSSGCTPD 254
+ + EEM + PD
Sbjct: 548 DEALGLLEEMKNKSVNPD 565
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ +N++++ K C+ A + M+S+ PD T+N LI +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A E+ M G P V TYN ++N + K++ V + M +G PN TF
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM-TAE 179
L++ + + ++AL LE +K+ P + LI+ + + G D A FRKM A
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ S N +I+AF E A + Q M + L PD TY ++ + +
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 240 PAVYEEMVSSGCTP 253
EM+ +G P
Sbjct: 657 YKFLLEMMENGFIP 670
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
G++P+ YN +I + A M + + P+ T+N L++ CK G
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+ L + M KGY P + T+NI+I+ Q K + ++L M G+ P+ T+ +L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ K+ +F D +E + + G P +N L+ + + D+A+ +M + +
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPA 241
P + +LI+ F ++ A+ + + M+E + TY ++ A
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623
Query: 242 VYEEMVSSGCTPD 254
+++EMV PD
Sbjct: 624 LFQEMVDRCLGPD 636
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P+ +N+++++ ++ LD A+ E M ++ + PD VT+ TLID CK G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D A LF++M++ S TYNI+I++ + L M + L P+ T+
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+VD + K+G N + L + GF P+ T +IN +A +M +
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
GL P A+N++ + D + A + + E+ L+ +TY
Sbjct: 702 GLVPE--AVNTICDV------DKKEVAAPKLVLEDLLKKSCITY 737
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G + + Y ++ F + N F +ML+ + T+N L+ CK G
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
E+L ++ ++G P + TYN+ I + + + D ++ + QG P+ +T+
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K+ +F +A L + + G +P YN LI Y + G+ A G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P SLI+ + A A+ ++P+V+ Y TL+K L +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ EM G P+ + +L + L
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGL 436
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 20 FGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPC 79
+G+ + A+ FERM + P ++N ++ +GY D+A +++ M+ +G +P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
V ++ I + S + LL M SQG N V + T+V + + + E
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
+ + G + +N L+ ++G + K+ G+ P+L N I +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
A ++ + E +PDV+TY L+ L + KF + +MV+ G PD
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ PD + + + + +F K + A+ M S+ + V + T++ + +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
ELF +M G S C+ T+N ++ + + + LL ++ +G+LPN T+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + G + A+ + L G KP YN LI + +A KM EG
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P N+LI + + A ++ N PD TY +L+ L + ++
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 241 AVYEEMVSSGCTPD 254
A++ E + G P+
Sbjct: 377 ALFNEALGKGIKPN 390
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 117 TFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
T+ ++++ G G+F E L ++ +++G +Y + Y ++G +AVN F +
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M +P++ + N++++ + +A V M++ + PDV ++T MK+ + +
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 236 FHKVPAVYEEMVSSGC 251
H + M S GC
Sbjct: 162 PHAALRLLNNMSSQGC 177
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP Y +I+ K + A+ +M I+ V +N +ID CK G+
Sbjct: 36 MVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
H A+ LF EM KG P V+TY+ MI+S +W LL M + + P+ VTF+
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ K G+ ++A E + G PT YN++I+ + ++ + A M ++
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ ++LIN + + +R + M + + VTYTTL+ +V
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 241 AVYEEMVSSGCTPD 254
+ M+SSG P+
Sbjct: 272 DLLNVMISSGVAPN 285
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y+ MID+F + A M+ +I PD VT++ LI+ K G
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEE++ +M ++G P +TYN MI+ Q++ + +L M S+ P+ VTF+T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ R ++ +E + G Y LI+ + Q G D A + M + G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
+ P+ + S++ + + +AFA+L+ +++++
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 124/249 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ YN +ID K HA F M + I PD +T++ +ID C++G
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+L ++M ++ +P V+T++ +IN++ + K + ++ M +G+ P +T+ +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D + K R NDA L+ + S P ++ LIN Y + D + F +M G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + + +LI+ F + A +L M + + P+ +T+ +++ +L + K
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 241 AVYEEMVSS 249
A+ E++ S
Sbjct: 307 AILEDLQKS 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 106 MQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
M G P+ VTFTTL++ GR AL ++ + G +P Y +IN + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTT 225
++ A+N KM +K ++ N++I+ +D A + M + + PDV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 226 LMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++ + R ++ + +M+ PD + L +AL
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%)
Query: 36 MLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK 95
M I+ D V ++D CK G H A+ LF EM +KG P VLTYN MI+S +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 96 WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNA 155
W LL M + + P+ VTF+ L++ + K + ++A E + + PT YN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 156 LINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
+I+ + ++ D A M ++G P ++ ++LIN + + +R + M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 216 LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + VTYTTL+ +V + EM+S G PD
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ YN MID+F A M+ ++I PD VT++ LI+ K
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEE+++EM + P +TYN MI+ Q++ D +L M S+G P+ VTF+T
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ R ++ +E + G Y LI+ + Q G D A + +M + G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
+ P + + ++ + +AFA+L+ +++++
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + ++ D ++D K +A F M + I P+ +T+N +ID C +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++L + M +K +P ++T++ +IN+ + K + ++ M + P +T+ +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D + K R +DA L+ + S G P ++ LIN Y + D + F +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + + +LI+ F + A +L M + PD +T+ ++ L + K
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 241 AVYEEMVSS 249
A+ E++ S
Sbjct: 241 AILEDLQKS 249
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+KS G +P YN ++ FGK A++ + M D+VT+N L+ + +AG+
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + + M +KG P +TY +I++ G K D+ L M+ G +PN T+
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + GK R N+ ++ L +KS G P +N ++ +G+ FR+M + G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P N+LI+A+G + +A + M V TY L+ AL R +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 241 AVYEEMVSSGCTPDRKARAML 261
V +M S G P + +++
Sbjct: 547 NVISDMKSKGFKPTETSYSLM 567
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 7/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFN-CLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
MK G P YNV++D FGK + + M S+ ++ D T +T++ + G
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A+E F E++ GY P +TYN ++ G + + +L M+ ++VT+
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
LV Y ++G +A +E++ G P Y +I+AY + G D+A+ F M
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI---RVDKF 236
G P+ N++++ G+ R E +L MK N P+ T+ T++ AL +DKF
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKF 474
Query: 237 HKVPAVYEEMVSSGCTPDRKARAMLRSA 264
V V+ EM S G PDR L SA
Sbjct: 475 --VNRVFREMKSCGFEPDRDTFNTLISA 500
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKSNG P+R +N M+ G F M S PD T+NTLI + + G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +++ EM + G++ CV TYN ++N++ + W ++++ M+S+G P +++
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 121 LVDVYGKSGRFNDALECLE------------------------------------VLKSM 144
++ Y K G + +E +E + K
Sbjct: 567 MLQCYAKGGNYL-GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G+KP ++N++++ + + + DQA + +GL P L+ NSL++ + +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+L+ ++++ L+PD+V+Y T++K R + + EM G P
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S ++ D + + G+ + A +++ +E D + T++ + + G ++
Sbjct: 168 SGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYE 227
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK-WDQVSDLLTRMQSQGLL--------- 112
+A +LF+ M++ G SP ++TYN++++ G + W ++ +L M+S+GL
Sbjct: 228 KAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTV 287
Query: 113 --------------------------PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
P VT+ L+ V+GK+G + +AL L+ ++
Sbjct: 288 LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSC 347
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
YN L+ AY + G S +A MT +G+ P+ + ++I+A+G+ ++ EA
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ MKE P+ TY ++ L + + +++ + +M S+GC+P+R
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS G +P Y++M+ + K R+ +I P + TL+ + K
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+E F ++ GY P ++ +N M++ +DQ +L ++ GL P+ VT+ +
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D+Y + G A E L+ L+ KP YN +I + +RGL +AV +MT G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
++P + N+ ++ + E V++ M +ND +P+ +T+ ++ R K+ +
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 128/324 (39%), Gaps = 70/324 (21%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ N D YN ++ + + A E M + + P+ +T+ T+ID + KAG
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT--- 117
D A +LF M++ G P TYN +++ +G + + +++ +L M+S G PN T
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 118 --------------------------------FTTLVDVYGKSGRFNDALECLEVLKSMG 145
F TL+ YG+ G DA + + G
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGE-------- 197
F T YNAL+NA A++G N M ++G KP+ + + ++ + +
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 198 --DRRDPEAFAVLQYM-------------------------KENDLQPDVVTYTTLMKAL 230
+ R E +M K++ +PD+V + +++
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPD 254
R + + + + E + G +PD
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPD 665
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 33 FERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCV----LTYNIMIN 88
F+ + SE +R D V+ +D +G+ +RA LF+ + S + I +
Sbjct: 127 FDSVKSELLRTDLVSLVKGLD---DSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVR 183
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+G + ++ + LL ++ Q L + +TT++ Y ++G++ A++ E +K MG P
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 149 TPTMYNALINAY------------------------------------AQRGLSDQAVNA 172
T YN +++ + A+ GL +A
Sbjct: 244 TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
F ++ + G +P + N+L+ FG+ EA +VL+ M+EN D VTY L+ A +R
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 233 VDKFHKVPAVYEEMVSSGCTPD 254
+ V E M G P+
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPN 385
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +GV P+ + Y+ MID + K + A ++ +L E+ P+ V + TL+D CKA
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LF M + G P + YN +I+ + LL+ M+S L P+ T+T
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + +A + +K+ P+ YN+LI+ Y + +QA++ +MTA G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+++ ++LI+ + R A + M + PDVVTYT L+ A + +
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+Y +M+ +G P+ A L
Sbjct: 500 RLYSDMLEAGIHPNDHTFACL 520
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G++P+ + Y + I + N ++ A FE M + P+ T++ +ID +CK G
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A L++E+ P V+ + +++ + L M G+ PN +
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + KSG +A+ L ++S+ P Y LIN +A F+KM E
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ PS NSLI+ + ++ +A + M + ++P+++T++TL+ V
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 241 AVYEEMVSSGCTPD 254
+Y EM G PD
Sbjct: 465 GLYFEMTIKGIVPD 478
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+ PD H Y V+ K + M S I+P+ + I C+
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ AE++F+ M++ G P + TY+ MI+ Q L + LLPN V F T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVD + K+ A + G P +YN LI+ + + G +AV +M +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P + LIN + + EA + Q MK + P TY +L+ + +
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 241 AVYEEMVSSGCTPD 254
+ EM +SG P+
Sbjct: 430 DLCSEMTASGVEPN 443
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 14/243 (5%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG+ R F +V +D ++ M+S + PD + L C K G + +
Sbjct: 172 NGLVRRRRFDSVWVD--------------YQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
E+L EM G P V Y I I + K ++ + M+ G+LPN T++ ++D
Sbjct: 218 KEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K+G A + + P ++ L++ + + A + F M G+ P
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+L N LI+ + EA +L M+ +L PDV TYT L+ L D+ + ++
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 244 EEM 246
++M
Sbjct: 398 QKM 400
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ + P YN +I + K ++ A+ M + + P+ +T++TLID +C
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L+ EM KG P V+TY +I++ + + L + M G+ PN TF
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVD + K GR + A++ + + LI Q G +A F M + G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
+ P + + S++ +++R + + M + + P+++
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 79/169 (46%)
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++N + + ++D V M S+GL+P+ + L K G ++ + L+ + S+G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
KP +Y I + ++A F M G+ P+L +++I+ + + +A+
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + + +L P+VV + TL+ + + +++ MV G P+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ H + ++D F K L A+ ++ + + V + LI+ C+ GY
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA F +M+ G +P + +Y M+ +++ L M G+LPN +
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624
Query: 121 LVDVYGKSGRFNDA 134
L Y +G A
Sbjct: 625 LARFYQANGYVKSA 638
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP+ Y ++ K AM +M +I+ D V ++ +ID CK G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM+ KG+ ++ Y +I +WD + LL M + + P+ V F+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G+ +A E + + G P Y +LI+ + + D+A + M ++G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P++ N LIN + + + + + M + D VTY TL++ + K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EMVS PD + +L L
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 125/249 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++ D Y+++ID K LD+A F M + + D + + TLI C AG
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D +L ++M ++ +P V+ ++ +I+ + K + +L M +G+ P+ VT+T+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K + + A L+++ S G P +N LIN Y + L D + FRKM+ G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + N+LI F E + A + Q M ++PD+V+Y L+ L + K
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 241 AVYEEMVSS 249
++E++ S
Sbjct: 478 EIFEKIEKS 486
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ + + ++MI+ + L A + +++ PDTVT++TLI+ C G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL M + G+ P ++T N ++N + K L+ RM G PN VT+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ V KSG+ A+E L ++ K Y+ +I+ + G D A N F +M +G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
K ++ +LI F R + +L+ M + + PDVV ++ L+ ++ K +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 241 AVYEEMVSSGCTPD 254
+++EM+ G +PD
Sbjct: 338 ELHKEMIQRGISPD 351
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 122/265 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G + D Y +I F D M+ +I PD V ++ LIDC K G
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AEEL +EM Q+G SP +TY +I+ + + D+ + +L M S+G PN TF
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K+ +D LE + G YN LI + + G + A F++M +
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P +++ L++ ++ +A + + ++++ ++ D+ Y ++ + K
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + G PD K ++ L
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGL 537
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y +ID F K N LD A + M+S+ P+ T+N LI+ +CKA
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D ELF++M +G +TYN +I K + +L M S+ + P+ V++
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G ALE E ++ + +YN +I+ D A + F + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP + N +I + EA + + M+E+ P+ TY L++A + K
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+ EE+ G + D M+
Sbjct: 583 KLIEEIKRCGFSVDASTVKMV 603
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ PD ++ +ID F K L A + M+ I PDTVT+ +LID CK D+A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ M KG P + T+NI+IN D +L +M +G++ + VT+ TL+ +
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ G+ A E + + S +P Y L++ G ++A+ F K+ ++ +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
N +I+ + +A+ + + ++PDV TY ++ L + + ++ +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 246 MVSSGCTPD 254
M G +P+
Sbjct: 553 MEEDGHSPN 561
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
D A+ F+ M RP + ++ L + +D +L ++M+ KG + + T +IM
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
IN K + ++ G P+ VTF+TL++ GR ++ALE ++ + MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
KPT NAL+N G AV +M G +P+ + ++ + + A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M+E ++ D V Y+ ++ L + ++ EM G D
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV D YN +I F + L+ A F+ M+S +RPD V++ L+D C G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A E+F+++++ + YNI+I+ M K D DL + +G+ P+ T+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K G ++A ++ G P YN LI A+ G + ++ ++ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 181 LKPSLLALNSLINAFGEDR 199
+ +++ + R
Sbjct: 593 FSVDASTVKMVVDMLSDGR 611
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 35/194 (18%)
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +LFQEM + P ++ ++ + + + +++D V DL +M+ +G+ N T +
Sbjct: 53 EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ N C R LS A +A K+ G
Sbjct: 113 MI---------NCCCRC-------------------------RKLS-LAFSAMGKIIKLG 137
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P + ++LIN + R EA ++ M E +P ++T L+ L K
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 241 AVYEEMVSSGCTPD 254
+ + MV +G P+
Sbjct: 198 LLIDRMVETGFQPN 211
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G P+ Y +I + K + +A FE MLSE P+ VT++ LID HCKAG
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 61 HDRAEELFQ-----------EMQQKGYS-----PCVLTYNIMINSMGAQEKWDQVSDLLT 104
++A ++F+ +M K Y P V+TY +++ + ++ LL
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
M +G PN + + L+D K G+ ++A E + GF T Y++LI+ Y +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
D A KM P+++ +I+ + + EA+ ++Q M+E QP+VVTYT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ + K + E M S G P+
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 51/305 (16%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y+ +++ + ++ A FE M + D T+ ++D CKAG
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A + F EM++ G +P V+TY +I++ +K ++L M S+G LPN VT++
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 LVDVYGKSG--------------------------------------------------- 129
L+D + K+G
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
R +A + L+ + G +P +Y+ALI+ + G D+A +M+ G +L +
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
SLI+ + + +R A VL M EN P+VV YT ++ L +V K + + + M
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 250 GCTPD 254
GC P+
Sbjct: 774 GCQPN 778
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTV-TWNTLIDCHCKAG 59
M G +P++ Y+ +ID K LD A M SE P T+ T+++LID + K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSLIDRYFKVK 723
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D A ++ +M + +P V+ Y MI+ + K D+ L+ M+ +G PN VT+T
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++D +G G+ LE LE + S G P Y LI+ + G D A N +M
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+I F ++ E+ +L + ++D P + Y L+ LI+ +
Sbjct: 844 HWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMA 901
Query: 240 PAVYEEMVSSGCT 252
+ EE+ + T
Sbjct: 902 LRLLEEVATFSAT 914
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 22/277 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTF----GKFNC--LDHAMATFERMLSEEIRPDTVTWNTLIDC 54
M G P YN++I + NC LD A + ML+ + + + ++ C
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
C AG +++A + +EM +G+ P TY+ ++N + K + L M+ GL+ +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
T+T +VD + K+G A + ++ +G P Y ALI+AY + A F
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM----------------KENDLQP 218
M +EG P+++ ++LI+ + + +A + + M +N +P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+VVTY L+ + + + + + M GC P++
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 16/262 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERML-SEEI---------------RPD 44
M S G P+ Y+ +ID K ++ A FERM S+++ RP+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
VT+ L+D CK+ + A +L M +G P + Y+ +I+ + K D+ ++ T
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
M G T+++L+D Y K R + A + L + P +Y +I+ + G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
+D+A + M +G +P+++ ++I+ FG + +L+ M + P+ VTY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 225 TLMKALIRVDKFHKVPAVYEEM 246
L+ + + EEM
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEM 840
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 111/227 (48%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
N +P+ Y ++D F K + ++ A + M E P+ + ++ LID CK G D
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A+E+ EM + G+ + TY+ +I+ ++ D S +L++M PN V +T ++D
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K G+ ++A + +++++ G +P Y A+I+ + G + + +M ++G+ P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ + LI+ ++ A +L+ MK+ Y +++
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G QP+ Y MID FG ++ + ERM S+ + P+ VT+ LID CK G
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L +EM+Q + Y +I G +++ + LL + P +
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIE--GFNKEFIESLGLLDEIGQDDTAPFLSVYRL 887
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPT----PTMYNALINAYAQRGLSDQAVNAFRKM 176
L+D K+ R AL LE + + F T + YN+LI + + A F +M
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
T +G+ P + + SLI + + EA +L ++ ++Q
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K +P R YN +I F K + LD A M +R D T CK G
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG- 284
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E ++ + + P + Y +I+ + +++ D L RM++ LPN VT++T
Sbjct: 285 --KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + L ++ G P+P ++N+L++AY G A +KM G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 181 LKPSLLALNSLINAFGEDRR----DPEAFAVLQY--MKENDLQPDVVTYTTLMKALIRVD 234
P + N LI + D+ D A Y M + + + ++ + L
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
K+ K +V EM+ G PD
Sbjct: 463 KYEKAFSVIREMIGQGFIPD 482
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 6/223 (2%)
Query: 38 SEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWD 97
+E PDTV + LI C+A + A + M+ P V+TY+ ++ +++
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 98 QVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
+ +L M +G P+ F +LV Y SG + A + L+ + G P +YN LI
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 158 NAYA------QRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
+ L D A A+ +M A G+ + + ++S + +AF+V++ M
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 212 KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
PD TY+ ++ L K ++EEM G D
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 9/245 (3%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
F NV++ + A+ R+ RP T+N LI KA D A + +EM
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
T S+ KW + LT ++++ +P+ V +T L+ ++ F
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+A++ L +++ P Y+ L+ + + M EG PS NSL
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL------IRVDKFHKVPAVYEE 245
++A+ A+ +L+ M + P V Y L+ ++ + D Y E
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 246 MVSSG 250
M+++G
Sbjct: 439 MLAAG 443
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD + Y +I +F +D A F M+ ++ P VT+ +LI+ C +
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +EM+ KG P V TY+ +++ + + Q +L M ++G PN VT+TT
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K + +A+E L+ + G KP +Y +I+ + +A N +M G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 181 LKPSLLALNSLINAFGEDRRD------PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+ P+ L N + E R AF + M+ + +V T +L+K L +
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG 422
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAML 261
+F K + +E+V+ GC P + +L
Sbjct: 423 EFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA-G 59
MK P + Y ++ + N L+ A ++ M + P + N LI C+ G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D ++F EM ++G P TY +I+ + + D+ L T M + P VT+T
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L++ S ++A+ LE +KS G +P Y++L++ + G S QA+ F M A
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G +P+++ +LI ++++ EA +L M L+PD Y ++ + KF +
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 240 PAVYEEMVSSGCTPDR 255
+EM+ G TP+R
Sbjct: 352 ANFLDEMILGGITPNR 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
++ M+ + + K+ DL+ RM+ + + + ++ YG+ R D+L +
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
K P+ Y ++ + + A ++ M GL P++ +LN LI A +
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 202 PEA-FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+A + M + PD TY TL+ L R + + ++ EMV C P
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 41/210 (19%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS G++P+ Y+ ++D K AM FE M++ RP+ VT+ TLI CK
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT- 119
A EL M +G P Y +I+ A K+ + ++ L M G+ PN +T+
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 120 ----------------------------------------TLVDVYGKSGRFNDALECLE 139
+LV K G F A++ ++
Sbjct: 373 HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
+ + G P+ + LI + + +A
Sbjct: 433 EIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 124/238 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++PD Y+ +ID + K L F + L + ++ D V +++ ID + K+G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +++ M +G SP V+TY I+I + + + + ++ +G+ P+ VT+++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + K G E + MG+ P +Y L++ +++GL A+ KM +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
++ +++ NSLI+ + R EA V + M ++PDV T+TT+M+ I D F K
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ N + D NV+I K + ++ A F ++ ++ PD VT+NT+I +C
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AE +F+ ++ + P +T I+I+ + D + + M +G PNAVT+
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + KS + + E ++ G P+ Y+ +I+ +RG D+A N F +
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
L P ++A LI + + R EA + ++M N ++PD
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 6/260 (2%)
Query: 1 MKSNGVQPDRHFY------NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDC 54
M G++PD + ++M D F K + F+ M +I D N +I
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
K + A + F + + P ++TYN MI + + D+ + ++ PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
VT T L+ V K+ + A+ ++ G KP Y L++ +++ + + F
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+M +G+ PS+++ + +I+ + R EA + + L PDVV Y L++ +V
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
+ + +YE M+ +G PD
Sbjct: 762 RLVEAALLYEHMLRNGVKPD 781
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y V++D K + HAM +ML + IR + V +N+LID C+
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 61 HDRAEELFQEMQQKGYSPCVLTY------------------------------------- 83
D A ++F+ M G P V T+
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 84 ----NIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
N++I+ + + + S + + P+ VT+ T++ Y R ++A E
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
+LK F P LI+ + D A+ F M +G KP+ + L++ F +
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARA 259
+F + + M+E + P +V+Y+ ++ L + + + ++ + + + PD A A
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 751
Query: 260 ML 261
+L
Sbjct: 752 IL 753
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A L + G +P V+T+ +IN + + D+ DL M+ +G+ P+ + ++TL+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K+G + G K ++++ I+ Y + G A +++M +G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ LI +D R EAF + + + ++P +VTY++L+ + A+Y
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 244 EEMVSSGCTPDRKARAMLRSAL 265
E+M+ G PD +L L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGL 471
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 35/250 (14%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
L++C C+ G D+A E+F Q G + M+NS+ ++ D ++D ++ G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 111 LLPNAVTFTTLV-DVYGKSGRFNDALE----------------CLEVLKSM--------- 144
+ P+ V+ V D G AL+ C +VLK +
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVAS 271
Query: 145 ---------GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
G P + LIN + +RG D+A + F+ M G++P L+A ++LI+ +
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ + ++ DVV +++ + ++ VY+ M+ G +P+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 256 KARAMLRSAL 265
+L L
Sbjct: 392 VTYTILIKGL 401
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE--IRPDTVTWNTLIDCHCKA 58
++S V+PDR +N +I G+ +D A M +E I PD ++ L+ C A
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G +RA+E++Q + + G Y I +NS WD + M+ + + P+ V F
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+ L+DV G + ++A L+ KS G + Y++L+ A +A+ + K+ +
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
L+P++ +N+LI A E + P+A L +K L+P+ +TY+ LM A R D F
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 239 VPAVYEEMVSSGCTPD 254
+ + G +P+
Sbjct: 803 SFKLLSQAKGDGVSPN 818
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G+ D Y +I + K +D F +M + + + T+ LID +AG
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG--LLPNAVTF 118
+A + ++ K P + +N +I++ G D+ D+L M+++ + P+ ++
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ +G+ A E +++ G + TP +Y +N+ ++ G D A + ++ M
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKE 672
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+ + P + ++LI+ G + EAF +LQ K ++ ++Y++LM A + K
Sbjct: 673 KDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKK 732
Query: 239 VPAVYEEMVSSGCTPDRKARAMLRSAL 265
+YE++ S P L +AL
Sbjct: 733 ALELYEKIKSIKLRPTISTMNALITAL 759
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+ P T+N L+ + + A + + +Q+ G + Y +I+S K D +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
++ +M + G+ N TF L+D ++G+ A +L+S KP ++NALI+A
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 161 AQRGLSDQAVNAFRKMTAEG--LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
Q G D+A + +M AE + P +++ +L+ A + A V Q + + ++
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
YT + + + + ++Y++M TPD
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V PD F++ +ID G LD A + S+ IR T+++++L+ C A
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A EL+++++ P + T N +I ++ + + + L +++ GL PN +T++
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
L+ + F + + L K G P M + + +R
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRR 832
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 87/182 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ Y + +++ K D A + ++ M +++ PD V ++ LID A D A
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ Q+ + +G ++Y+ ++ + + W + +L +++S L P T L+
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ + A+E L+ +K++G KP Y+ L+ A ++ + + + +G+ P+
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Query: 185 LL 186
L+
Sbjct: 819 LI 820
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 6/252 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P+ Y+ + + A F+ + + PD V + T+ID +C G D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD---LLTRMQSQGLLPNAVTFTTLV 122
+ F + + G P + T I+I GA ++ +SD + M+++GL + VT+ L+
Sbjct: 429 QYFGALLKSGNPPSLTTSTILI---GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
YGK+ + N E ++ ++S G P YN LI++ RG D+A ++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
PS LA +I F + EAF + YM + ++PDVVT + L+ + + K +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 243 YEEMVSSGCTPD 254
+ +++ +G PD
Sbjct: 606 FNKLLDAGLKPD 617
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 3/257 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++PD + V ID K L A + ++ I D+V+ +++ID CK G
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +L + + P + Y+ ++++ + + S + + GLLP+ V +TT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D Y GR + A + L G P+ T LI A ++ G A + FR M EG
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
LK ++ N+L++ +G+ + + F ++ M+ + PDV TY L+ +++ +
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 241 AVYEEMVSSGCTPDRKA 257
+ E++ G P A
Sbjct: 534 EIISELIRRGFVPSTLA 550
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G P ++I +F + A + F M +E ++ D VT+N L+ + K ++
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
EL EM+ G SP V TYNI+I+SM + D+ +++++ + +G +P+ + FT ++
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ K G F +A + + KP +AL++ Y + ++A+ F K+ GLKP
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
++ N+LI+ + +A ++ M + + P+ T+ L+ L
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G++ D YN ++ +GK + L+ + M S I PD T+N LI GY
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E+ E+ ++G+ P L + +I + + + L M + P+ VT +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ R A+ L G KP +YN LI+ Y G ++A M G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 LKPS 184
+ P+
Sbjct: 649 MLPN 652
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 32/282 (11%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P R ++ + + L+ A E MLS + + I +C GY D+
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL M+ G P ++ + + I+ + + + +L +++ G+ ++V+ ++++D
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 125 YGKSGRFNDALECLEVLK--------------------------------SMGFKPTPTM 152
+ K G+ +A++ + + +G P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y +I+ Y G +D+A F + G PSL LI A +A +V + MK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
L+ DVVTY LM + + +KV + +EM S+G +PD
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A E + M +G ++ I + +D+ +LL M+ G+ P+ V FT +D
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV---NAFRKMTAEG 180
K+G +A L LK G +++I+ + + G ++A+ ++FR
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR------ 368
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P++ +S ++ A + Q + E L PD V YTT++ + + K
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 241 AVYEEMVSSGCTPDRKARAMLRSA 264
+ ++ SG P +L A
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGA 452
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 1/275 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++P+ Y+++ID F K +A +M + + V +NT+I+ CK G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 61 HDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+A+E+ Q + ++K YS +YN +I+ D + M G PN VTFT
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L++ + KS R + ALE +KSM K Y ALI+ + ++ A F ++
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
GL P++ NSLI+ F + A + + M + + D+ TYTT++ L++ +
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+Y E++ G PD +L + L Q LK+
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLID------- 53
M+ G+ PD+ ++VM++ F K ++ A+ + RM S I P +V +T+I
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 54 ---------------------CH------CKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
C+ CK G D A + M+QKG P V+ YN M
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS------------------ 128
+ + + D + + M +GL PN T++ L+D + K+
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 129 -----------------GRFNDALECLE-VLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
G+ + A E L+ ++K + + T YN++I+ + + G +D AV
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 171 NAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+R+M+ G P+++ SLIN F + R A + MK +L+ D+ Y L+
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
+ + ++ E+ G P+ L S R
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVT-WNTLIDCHCKAG 59
M ++ + + YN +I+ K A + ++ E+ + T +N++ID K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D A E ++EM + G SP V+T+ +IN + D ++ M+S L + +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+D + K A L +G P ++YN+LI+ + G D A++ ++KM +
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+ L ++I+ +D A + + + + PD + + L+ L + +F K
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 240 PAVYEEMVSSGCTPD 254
+ EEM TP+
Sbjct: 785 SKMLEEMKKKDVTPN 799
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG P+ + +I+ F K N +D A+ M S E++ D + LID CK
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LF E+ + G P V YN +I+ K D DL +M + G+ + T+TT
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D K G N A + L +G P ++ L+N +++G +A +M +
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++L +++I + EAF + M E + D + L+ + K P
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG-----RVEKPP 850
Query: 241 AVYEEMVSSGCTPDRKA 257
A + +SS +P+ ++
Sbjct: 851 AASK--ISSLASPEMRS 865
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 127/287 (44%), Gaps = 39/287 (13%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV + Y +I F K ++ A+ + M+ I + +L++ +CK +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD- 123
+LF M+++G +P + +++M+ + ++ + RM+S + P++V T++
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 124 ---------------------------------VYGKSGRFNDALECLEVLKSMGFKPTP 150
++ K G+ + A L++++ G +P
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQY 210
YN ++ A+ + D A + F +M +GL+P+ + LI+ F +++ + A+ V+
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 211 MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV-----SSGCT 252
M ++ + + V Y T++ L +V + K + + ++ S CT
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT 591
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N +++ + + +D+A+ F M+ ++ P N ++ ++ D A+E++ +M
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G + +T +++ + + K ++ + R+ S+G P+ + F+ V K+
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 133 DALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
AL+ L E+ +G + Y ++I A+ + G ++AV +M G+ S++A SL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+N + + +A + M+E L PD V ++ +++ + + K Y M S
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 252 TP 253
P
Sbjct: 412 AP 413
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 2/260 (0%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTV-TWNTLIDCHCKAGYH 61
S G +PD +++ + K L A+ M + P + T+ ++I K G
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ A + EM G V+ ++N + + DL RM+ +GL P+ V F+ +
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
V+ + K+ A+E +KS+ P+ + + +I + + A+ F +
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ N + F + + A + L+ M++ ++P+VV Y +M A R+ +
Sbjct: 447 AHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 242 VYEEMVSSGCTPDRKARAML 261
++ EM+ G P+ ++L
Sbjct: 506 IFSEMLEKGLEPNNFTYSIL 525
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 97 DQVSDLLTRMQSQG--LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
D+ S+LL S L+PN V LVD S RF GF+ TP +N
Sbjct: 131 DRASNLLVMFVSNNPTLIPN-VMVNNLVD---SSKRF-------------GFELTPRAFN 173
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
L+NAY + D AV+ F M + P + +N+++++ EA + M
Sbjct: 174 YLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLI 233
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ D VT LM+A +R K + ++ ++S G PD
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPD 273
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 6/252 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P+ Y+ + + A F+ + + PD V + T+ID +C G D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD---LLTRMQSQGLLPNAVTFTTLV 122
+ F + + G P + T I+I GA ++ +SD + M+++GL + VT+ L+
Sbjct: 429 QYFGALLKSGNPPSLTTSTILI---GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
YGK+ + N E ++ ++S G P YN LI++ RG D+A ++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
PS LA +I F + EAF + YM + ++PDVVT + L+ + + K +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 243 YEEMVSSGCTPD 254
+ +++ +G PD
Sbjct: 606 FNKLLDAGLKPD 617
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 3/257 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++PD + V ID K L A + ++ I D+V+ +++ID CK G
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +L + + P + Y+ ++++ + + S + + GLLP+ V +TT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D Y GR + A + L G P+ T LI A ++ G A + FR M EG
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
LK ++ N+L++ +G+ + + F ++ M+ + PDV TY L+ +++ +
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 241 AVYEEMVSSGCTPDRKA 257
+ E++ G P A
Sbjct: 534 EIISELIRRGFVPSTLA 550
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G P ++I +F + A + F M +E ++ D VT+N L+ + K ++
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
EL EM+ G SP V TYNI+I+SM + D+ +++++ + +G +P+ + FT ++
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ K G F +A + + KP +AL++ Y + ++A+ F K+ GLKP
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
++ N+LI+ + +A ++ M + + P+ T+ L+ L
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G++ D YN ++ +GK + L+ + M S I PD T+N LI GY
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E+ E+ ++G+ P L + +I + + + L M + P+ VT +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ R A+ L G KP +YN LI+ Y G ++A M G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 LKPS 184
+ P+
Sbjct: 649 MLPN 652
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 32/282 (11%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P R ++ + + L+ A E MLS + + I +C GY D+
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL M+ G P ++ + + I+ + + + +L +++ G+ ++V+ ++++D
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 125 YGKSGRFNDALECLEVLK--------------------------------SMGFKPTPTM 152
+ K G+ +A++ + + +G P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y +I+ Y G +D+A F + G PSL LI A +A +V + MK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
L+ DVVTY LM + + +KV + +EM S+G +PD
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 9/204 (4%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A E + M +G ++ I + +D+ +LL M+ G+ P+ V FT +D
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV---NAFRKMTAEG 180
K+G +A L LK G +++I+ + + G ++A+ ++FR
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR------ 368
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+P++ +S ++ A + Q + E L PD V YTT++ + + K
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 241 AVYEEMVSSGCTPDRKARAMLRSA 264
+ ++ SG P +L A
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGA 452
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NGV PD +N+++ + A++ FE M ++RPDT T+N +I C K G
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 61 HDRAEELFQEMQQKGYS--PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
+A +LF M++K P V+T+ +++ + + + + M ++GL PN V++
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ Y G AL L +K G P Y L+N+Y + +A F M
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
E KP+++ N+LI+A+G + EA + + M+++ ++P+VV+ TL+ A R K
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 239 VPAVYEEMVSSG 250
V V S G
Sbjct: 479 VDTVLSAAQSRG 490
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 39/270 (14%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
YN+MI + N +D A F M +PD T++ LI+ H +AG A L +M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR- 130
+ +P TYN +IN+ G+ W + ++ +M G+ P+ VT ++ Y KSGR
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQ 263
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN------------------- 171
++ AL E++K +P T +N +I ++ G S QA++
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 172 ------------------AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
F M AEGLKP++++ N+L+ A+ A +VL +K+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 214 NDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
N + PDVV+YT L+ + R + K V+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 128/265 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K NG+ PD Y +++++G+ A F M E +P+ VT+N LID + G+
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+F++M+Q G P V++ ++ + +K V +L+ QS+G+ N + +
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ Y + A+ + ++ K + LI+ + +A++ ++M
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + +S++ A+ + + EA ++ MK +PDV+ YT+++ A +K+ K
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ EM ++G PD A + L A
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRAF 645
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD + ++ + +++ A FE M++E ++P+ V++N L+ + G A
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ +++Q G P V++Y ++NS G + + ++ M+ + PN VT+ L+D YG
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA---EGLKP 183
+G +A+E ++ G KP L+ A ++ S + VN ++A G+
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR---SKKKVNVDTVLSAAQSRGINL 493
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ A NS I ++ +A A+ Q M++ ++ D VT+T L+ R+ K+ + +
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 244 EEM 246
+EM
Sbjct: 554 KEM 556
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 123/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++P+ YN ++ + A++ + I PD V++ L++ + ++
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A+E+F M+++ P V+TYN +I++ G+ + ++ +M+ G+ PN V+ T
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +S + + L +S G YN+ I +Y ++A+ ++ M +
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+K + LI+ + PEA + L+ M++ + Y++++ A + + +
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 241 AVYEEMVSSGCTPD 254
+++ +M +GC PD
Sbjct: 586 SIFNQMKMAGCEPD 599
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 67 LFQEMQ-QKGYSPCVLTYNIMINSMGAQEKW-DQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+F+ M+ QK Y YN+MI + A+ W DQ L MQ P+A T+ L++
Sbjct: 129 VFKWMKIQKNYCARNDIYNMMIR-LHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA 187
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+G++G++ A+ ++ + P+ + YN LINA G +A+ +KMT G+ P
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
L+ N +++A+ R+ +A + + MK ++PD T+ ++ L ++ + + ++
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 245 EMVS--SGCTPD 254
M + C PD
Sbjct: 308 SMREKRAECRPD 319
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC----- 56
+S G+ + YN I ++ L+ A+A ++ M ++++ D+VT+ LI C
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 57 ------------------------------KAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
K G AE +F +M+ G P V+ Y M
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
+++ A EKW + +L M++ G+ P+++ + L+ + K G+ ++ +++++
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
T ++ + +A +A++ + M S+ N +++ FG+ +
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ + + + ++ TY L++ L+ V + K V E M +G P +
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQ 776
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALE-CLEVLKSM 144
+++ + A +W++V +L + N F L+ + G +E C+ V K M
Sbjct: 81 VVDRLMALNRWEEVDGVLNSWVGRFARKN---FPVLIRELSRRG----CIELCVNVFKWM 133
Query: 145 GFKPT----PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+ +YN +I +A+ DQA F +M KP ++LINA G +
Sbjct: 134 KIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 201 DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAM 260
A ++ M + P TY L+ A + + V ++M +G PD +
Sbjct: 194 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 253
Query: 261 LRSALRYMRQTLKS 274
+ SA + RQ K+
Sbjct: 254 VLSAYKSGRQYSKA 267
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NGV PD +N+++ + A++ FE M ++RPDT T+N +I C K G
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 61 HDRAEELFQEMQQKGYS--PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
+A +LF M++K P V+T+ +++ + + + + M ++GL PN V++
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ Y G AL L +K G P Y L+N+Y + +A F M
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
E KP+++ N+LI+A+G + EA + + M+++ ++P+VV+ TL+ A R K
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 239 VPAVYEEMVSSG 250
V V S G
Sbjct: 347 VDTVLSAAQSRG 358
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 39/270 (14%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
YN+MI + N +D A F M +PD T++ LI+ H +AG A L +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR- 130
+ +P TYN +IN+ G+ W + ++ +M G+ P+ VT ++ Y KSGR
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQ 131
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN------------------- 171
++ AL E++K +P T +N +I ++ G S QA++
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 172 ------------------AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
F M AEGLKP++++ N+L+ A+ A +VL +K+
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 214 NDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
N + PDVV+YT L+ + R + K V+
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 128/265 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K NG+ PD Y +++++G+ A F M E +P+ VT+N LID + G+
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+F++M+Q G P V++ ++ + +K V +L+ QS+G+ N + +
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ Y + A+ + ++ K + LI+ + +A++ ++M
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + +S++ A+ + + EA ++ MK +PDV+ YT+++ A +K+ K
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 488
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ EM ++G PD A + L A
Sbjct: 489 ELFLEMEANGIEPDSIACSALMRAF 513
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD + ++ + +++ A FE M++E ++P+ V++N L+ + G A
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ +++Q G P V++Y ++NS G + + ++ M+ + PN VT+ L+D YG
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA---EGLKP 183
+G +A+E ++ G KP L+ A ++ S + VN ++A G+
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR---SKKKVNVDTVLSAAQSRGINL 361
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ A NS I ++ +A A+ Q M++ ++ D VT+T L+ R+ K+ + +
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 244 EEM 246
+EM
Sbjct: 422 KEM 424
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 123/254 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++P+ YN ++ + A++ + I PD V++ L++ + ++
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A+E+F M+++ P V+TYN +I++ G+ + ++ +M+ G+ PN V+ T
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +S + + L +S G YN+ I +Y ++A+ ++ M +
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+K + LI+ + PEA + L+ M++ + Y++++ A + + +
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 241 AVYEEMVSSGCTPD 254
+++ +M +GC PD
Sbjct: 454 SIFNQMKMAGCEPD 467
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 73 QKGYSPCVLTYNIMINSMGAQEKW-DQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
QK Y YN+MI + A+ W DQ L MQ P+A T+ L++ +G++G++
Sbjct: 4 QKNYCARNDIYNMMIR-LHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A+ ++ + P+ + YN LINA G +A+ +KMT G+ P L+ N +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS--S 249
++A+ R+ +A + + MK ++PD T+ ++ L ++ + + ++ M +
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 250 GCTPD 254
C PD
Sbjct: 183 ECRPD 187
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC----- 56
+S G+ + YN I ++ L+ A+A ++ M ++++ D+VT+ LI C
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 57 ------------------------------KAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
K G AE +F +M+ G P V+ Y M
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
+++ A EKW + +L M++ G+ P+++ + L+ + K G+ ++ +++++
Sbjct: 475 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
T ++ + +A +A++ + M S+ N +++ FG+ +
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 594
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ + + + ++ TY L++ L+ V + K V E M +G P +
Sbjct: 595 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQ 644
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 126/261 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++S+ +P+ H Y MI + K + L+ A F RM + + P+ T+ TLI+ HCKAG
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA EL M +G+ P + TYN I+S+ + + + +LL + S GL + VT+T
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K N AL + GF+ + N LI A+ ++ ++ F+ + + G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+ S+I+ + ++ A MK + PD TY +L+ L + +
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 241 AVYEEMVSSGCTPDRKARAML 261
+YE M+ G +P R L
Sbjct: 589 KLYEAMIDRGLSPPEVTRVTL 609
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERML-SEEIRPDTVTWNTLIDCHCKAG 59
M NG +P+ + + +ID K + A F +++ S+ +P+ T+ ++I +CK
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+RAE LF M+++G P V TY +IN + + +L+ M +G +PN T+
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+D K R +A E L S G + Y LI ++ +QA+ F +M
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G + + N LI AF ++ E+ + Q + L P TYT+++ +
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
+ M GC PD L S L
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGL 578
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 3 SNG-VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
+NG +Q M+ F + L+ A+ M ++ + P ++T N +++ + G
Sbjct: 139 ANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLI 198
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ AE +F EM +G P +Y +M+ K + LT M +G +P+ T T +
Sbjct: 199 EYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLI 258
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ ++G N A+ + +GFKP + +LI+ ++G QA +M G
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAV-LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP++ +LI+ + +AF + L+ ++ + +P+V TYT+++ + DK ++
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 241 AVYEEMVSSGCTPD 254
++ M G P+
Sbjct: 379 MLFSRMKEQGLFPN 392
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G + D N++I F + + + F+ ++S + P T+ ++I C+CK G
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A + F M++ G P TY +I+ + + D+ L M +GL P VT T
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 121 LVDVYGKSGRFNDALECLEVL-KSMGFKPTPTMYNAL 156
L Y K +A+ LE L K + + T+ L
Sbjct: 609 LAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKL 645
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 3/227 (1%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S G++ D Y ++I K N ++ A+A F RM D N LI C+
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+E LFQ + G P TY MI+ + D M+ G +P++ T+ +L+
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
K ++A + E + G P L Y +R + + NA + K
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR---NDSANAMILLEPLDKK 632
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+ + +L+ +++ A Q + E D D VT A
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 679
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR-- 63
+QP+ +NV+I+ K ++ A E M P+ V++NTLID +CK G + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 64 -AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+ + +EM + SP + T+NI+I+ + + M Q + PN +++ +L+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ G+ ++A+ + + S G +P YNALIN + + + +A++ F + +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ N LI+A+ + + + FA+ + M+ + PDV TY L+ L R +
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 243 YEEMVSSGCTPD 254
++++ S G PD
Sbjct: 459 FDQLTSKG-LPD 469
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N V P+ +N++ID F K + L +M F+ ML ++++P+ +++N+LI+ C G
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +M G P ++TYN +IN + + D+ ++ QG +P +
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y K G+ +D E ++ G P YN LI + G + A F ++T++G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
L P L+ + L+ + +A +L+ M + L+P +TY +MK
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 32 TFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINS-- 89
++ M+ +I+P+ T+N +I+ CK G ++A ++ ++M+ G SP V++YN +I+
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 90 -MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+G K + +L M + PN TF L+D + K +++ + + KP
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
YN+LIN G +A++ KM + G++P+L+ N+LIN F ++ EA +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+K P Y L+ A ++ K A+ EEM G PD
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GVQP+ YN +I+ F K + L A+ F + + P T +N LID +CK G
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D L +EM+++G P V TYN +I + + L ++ S+GL P+ VTF
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHI 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE- 179
L++ Y + G A L+ + MG KP YN ++ Y + G A N +M E
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
L+ ++ + N L+ + + + +A +L M E L P+ +TY
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI-------------- 581
Query: 240 PAVYEEMVSSGCTPD 254
V EEMV G PD
Sbjct: 582 --VKEEMVDQGFVPD 594
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
E +++EM ++ P V T+N++IN++ K ++ D++ M+ G PN V++ TL+D
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 124 VYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
Y K G + VLK M P T +N LI+ + + ++ F++M +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP++++ NSLIN + EA ++ M +QP+++TY L+ + D +
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 241 AVYEEMVSSGCTPDRKARAMLRSA 264
++ + G P + ML A
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDA 410
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 6/243 (2%)
Query: 17 IDTFGKFNCLDHAMATFERMLS--EEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
+D F + N DH + + +S + + +++ + L+ + + E F+
Sbjct: 124 LDGFVR-NGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
GY L+ ++ ++ + + V + M + + PN TF +++ K+G+ N A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA---FRKMTAEGLKPSLLALNSL 191
+ +E +K G P YN LI+ Y + G + + A ++M + P+L N L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
I+ F +D P + V + M + D++P+V++Y +L+ L K + ++ ++MVS+G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 252 TPD 254
P+
Sbjct: 363 QPN 365
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 120/249 (48%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K+ +P +H YN ++++ +++ML + PD +T+N L+ + + G
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
DR + LF EM + G+SP TYNI+++ +G K L M+ G+ P+ + +TTL
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D ++G L+ + G +P Y +I Y G D+A FR+MT +G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P++ NS+I EA +L+ M+ P+ V Y+TL+ L + K +
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 242 VYEEMVSSG 250
V EMV G
Sbjct: 451 VIREMVKKG 459
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 121/266 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G +N++I + G+ A+ F + + RP ++N +++
Sbjct: 175 MVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQ 234
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E ++++M + G+SP VLTYNI++ + K D+ L M G P++ T+
Sbjct: 235 YKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI 294
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + GK + AL L +K +G P+ Y LI+ ++ G + +M G
Sbjct: 295 LLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 354
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P ++ +I + +A + + M P+V TY ++++ L +F +
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 414
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALR 266
+ +EM S GC P+ + L S LR
Sbjct: 415 WLLKEMESRGCNPNFVVYSTLVSYLR 440
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD + YN+++ GK N A+ T M I P + + TLID +AG
Sbjct: 280 MARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + EM + G P V+ Y +MI + D+ ++ M +G LPN T+ +
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ +G F +A L+ ++S G P +Y+ L++ + G +A R+M +G
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD YN+++ T + +D F+ M + PD+ T+N L+ K
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A M++ G P VL Y +I+ + + L M G P+ V +T
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y SG + A E + G P YN++I G +A ++M + G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
P+ + ++L++ + + EA V++ M
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 2/243 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC-KAGYHDRAEELFQEM 71
Y++++ F + + M+ + T+N LI C C +AG +A F +
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI-CSCGEAGLAKQAVVQFMKS 210
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ Y P +YN ++NS+ +++ + + +M G P+ +T+ L+ + G+
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+ + + GF P YN L++ + A+ M G+ PS+L +L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
I+ L M + +PDVV YT ++ + + K ++ EM G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 252 TPD 254
P+
Sbjct: 391 LPN 393
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%)
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++ L+ ++ + G + ++ + GF T +N LI + + GL+ QAV F K
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+P + N+++N+ ++ V + M E+ PDV+TY L+ R+ K
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 237 HKVPAVYEEMVSSGCTPD 254
+ +++EM G +PD
Sbjct: 271 DRFDRLFDEMARDGFSPD 288
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P + Y +ID K + A M S+ + V +NTLID +C+ G D A
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++ M+QKG+ V T N + + +++D+ L RM G+ + V++T L+DV
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y K G +A + S G +P YN +I AY ++G +A M A G+ P
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
SLI+ EA + M L + VTYT ++ L + K + +Y+
Sbjct: 539 SYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYD 598
Query: 245 EMVSSGCTPDRKARAMLRSAL 265
EM G T D K L ++
Sbjct: 599 EMKRKGYTIDNKVYTALIGSM 619
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++ D H Y +I + + A F+ + + + P + T+ LID CK G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE L EMQ KG + + +N +I+ + D+ S + M+ +G + T T
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + + R+++A + L + G K + Y LI+ Y + G ++A F +M+++G
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P+ + N +I A+ + + EA + M+ N + PD TYT+L+ D +
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ EM G + ++ S L
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGL 584
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +GV ++ Y ++++ K + A F+ M I D + +LI +C+ G
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA LF E+ +KG SP TY +I+ + + L+ MQS+G+ V F T
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y + G ++A +V++ GF+ N + + + + D+A +M G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+K S ++ +LI+ + ++ EA + M +QP+ +TY ++ A + K +
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 241 AVYEEMVSSGCTPD 254
+ M ++G PD
Sbjct: 525 KLRANMEANGMDPD 538
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S GV + +N +ID + + +D A ++ M + + D T NT+ C +
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D A++ M + G ++Y +I+ + ++ L M S+G+ PNA+T+
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y K G+ +A + +++ G P Y +LI+ D+A+ F +M +G
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
L + + +I+ + + EAF + MK D YT L+ ++
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 110/229 (48%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+D + F RM+ ++ + +++ C+ G +++++L +E KG P TYN
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN+ Q + V +L M+ G++ N VT+T L+++ K+G+ +DA + + ++ G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+ +Y +LI+ ++G +A F ++T +GL PS +LI+ + A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ M+ + V + TL+ R + +Y+ M G D
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 120/289 (41%), Gaps = 35/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA-- 58
M +GV+ + ++++ + ++ + + + I+P+ T+NT+I+ + K
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 59 ---------------------------------GYHDRAEELFQEMQQKGYSPCVLTYNI 85
G AE+LF EM+++G V Y
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I+ + + L + +GL P++ T+ L+D K G A + ++S G
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
T ++N LI+ Y ++G+ D+A + M +G + + N++ + F +R EA
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAK 454
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
L M E ++ V+YT L+ + + ++ EM S G P+
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++NG+ PD + Y +I + +D AM F M + + ++VT+ +I KAG
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQE 94
D A L+ EM++KGY+ Y +I SM + E
Sbjct: 590 SDEAFGLYDEMKRKGYTIDNKVYTALIGSMHSPE 623
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 82/195 (42%)
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G + +F M +KG S + + + + + + D ++ RM G+ +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T +V+ + G + + ++ G KP YN +INAY ++ + M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+G+ + + L+ ++ + +A + M+E ++ DV YT+L+ R +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 239 VPAVYEEMVSSGCTP 253
+++E+ G +P
Sbjct: 348 AFLLFDELTEKGLSP 362
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 123/243 (50%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
Y+ ++ T K + A F M S ++ + ++ ++++ C AG A E+ ++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+KG + YN + +++G ++ + DL +M+ G P+ T+ L+ +G+ G
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
++A+ E L+ KP YN+LIN + G D+A F++M +GL P ++ ++L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+ FG+ R A+++ + M QP++VTY L+ L + + + +Y +M G
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 252 TPD 254
TPD
Sbjct: 614 TPD 616
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 67/321 (20%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + D + Y +MI T G+ D A+ F M++E + + V +NTL+ K
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQE---KWDQVSDLLTRMQSQGLLPNAV- 116
D+A ++F M + G P TY++++N + A+ + D V ++ R +QG+ V
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVR 380
Query: 117 ----------------------------TFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
++ ++++ +G+ +A+E L + G
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 149 TPTMYNA-----------------------------------LINAYAQRGLSDQAVNAF 173
MYN LI ++ + G D+A+N F
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
++ KP +++ NSLIN G++ EA + M+E L PDVVTY+TLM+ +
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 234 DKFHKVPAVYEEMVSSGCTPD 254
++ +++EEM+ GC P+
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPN 581
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +G PD YN++I +FG+ +D A+ FE + + +PD +++N+LI+C K G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A F+EMQ+KG +P V+TY+ ++ G E+ + L M +G PN VT+
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL 156
L+D K+GR +A++ +K G P Y L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+ GV D YN + GK + H FE+M + PD T+N LI + G
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +F+E+++ P +++YN +IN +G D+ MQ +GL P+ VT++T
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ +GK+ R A E + G +P YN L++ + G + +AV+ + KM +G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 181 LKP 183
L P
Sbjct: 613 LTP 615
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 113/226 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S V+ +R Y M+++ A+ ++ + + DT+ +NT+ K
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+LF++M++ G SP + TYNI+I S G + D+ ++ ++ P+ +++ +
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNS 517
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ GK+G ++A + ++ G P Y+ L+ + + + A + F +M +G
Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+P+++ N L++ ++ R EA + MK+ L PD +TYT L
Sbjct: 578 CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 35/286 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ G + D YN+++D K + A FE M R D T+ +I + G
Sbjct: 229 IRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK 285
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A LF EM +G + V+ YN ++ + + D+ + +RM G PN T++
Sbjct: 286 CDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 121 LVDVYGKSG---RFNDALEC-------------LEVLKSMG----------------FKP 148
L+++ G R + +E + L +G K
Sbjct: 346 LLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
Y +++ + G + +A+ K+ +G+ + N++ +A G+ ++ +
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ MK++ PD+ TY L+ + RV + + ++EE+ S C PD
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 94 EKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMY 153
+++D+V +L M + N T L+ +G + D CL ++K K Y
Sbjct: 150 DRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNT---EDLQMCLRLVKKWDLKMNSFTY 206
Query: 154 NALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
L+ AY + +A + + ++ G K + A N L++A +D + A V + MK+
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKK 263
Query: 214 NDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ D TYT +++ + R+ K + ++ EM++ G T
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLT 302
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +G + ++ID F K +D AM + M + D V + +LI C G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
DR + LF E+ ++G SPC +TYN +I + + S++ M +G+ PN T+T
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D G+ +AL+ L ++ +P YN +IN + GL AV M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND--LQPDVVTYTTLMKALIRVDKFHK 238
+P + N L+ EA +L M ++ PDV++Y L+ L + ++ H+
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 239 VPAVYEEMVSSGCTPDR-KARAMLRSALR 266
+Y+ +V DR +L S L+
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 16/263 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERML--SEEIRPDTVTWNTLIDCHCKA 58
MK +PD YN+++ LD A ML S PD +++N LI CK
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSM-------GAQEKWDQVSDLLTRMQSQGL 111
+A +++ + +K + +T NI++NS A E W Q+SD +
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD-------SKI 490
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN 171
+ N+ T+T ++D + K+G N A L ++ +P+ YN L+++ + G DQA
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
F +M + P +++ N +I+ + A ++L M L PD+ TY+ L+ +
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 232 RVDKFHKVPAVYEEMVSSGCTPD 254
++ + + +++MV SG PD
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPD 633
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A++ M + PD ++NT+I C+ ++A EL EM+ G S ++T+ I+I+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ K D+ L M+ GL + V +T+L+ + G + + + G P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
YN LI + + G +A F M G++P++ LI+ + EA +L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
M E D +P+ VTY ++ L + + E M PD +L L
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A ML + N L+ C+ +A L +EM++ P V +YN +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
++ ++ +L M+ G + VT+ L+D + K+G+ ++A+ L+ +K MG +
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
+Y +LI + G D+ F ++ G P + N+LI F + + EA +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++M E ++P+V TYT L+ L V K + + M+ P+
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y MID F K L+ A +M E++P +N L+ CK G D+A LF+EMQ
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ P V+++NIMI+ LL M GL P+ T++ L++ + K G +
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+A+ + + GF+P + ++++ +G +D+ +K+
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 105/226 (46%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A + + +ML + + V+ + L++C+ + A + M ++G++ V +NI++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ + + LL M+ L+P+ ++ T++ + + ALE +K G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
+ + LI+A+ + G D+A+ ++M GL+ L+ SLI F + A+
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ E P +TY TL++ ++ + + ++E M+ G P+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + +QP YN ++ + K LD A FE M + PD V++N +ID KAG
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
AE L M + G SP + TY+ +IN D+ +M G P+A
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+ + Y +I + ++ AM +E+ML PD + LI C+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +++++ G+S +L YN++I + ++V ++LT M+ +G P+++T+ T
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +GK F +E ++ G PT T Y A+I+AY G D+A+ F+ M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 181 -LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P+ + N LINAF + +A ++ + MK ++P+V TY L K L + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EMV C P++ +L L
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERL 732
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERM-LSEEIRPDTVTWNTLIDCHCKAGYHD 62
N ++ D +N +ID K L A RM L E P+ VT+N LID +C+AG +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+E+ M++ P V+T N ++ M + M+ +G+ N VT+ TL+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
A+ E + G P +Y ALI+ Q A+ K+ G
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
LLA N LI F + + + +L M++ +PD +TY TL+ + F V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 243 YEEMVSSGCTP 253
E+M G P
Sbjct: 604 MEQMREDGLDP 614
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 7/256 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE------IRPDTVTWNTLIDCHCKAG 59
++PD ++I+T K +D A+ FE+M + I+ D++ +NTLID CK G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 YHDRAEELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
AEEL M+ ++ +P +TYN +I+ K + ++++RM+ + PN VT
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T+V + N A+ ++ G K Y LI+A ++A+ + KM
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G P +LI+ + RRD +A V++ +KE D++ Y L+ + K
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEK 564
Query: 239 VPAVYEEMVSSGCTPD 254
V + +M G PD
Sbjct: 565 VYEMLTDMEKEGKKPD 580
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN +ID + + L+ A RM +EI+P+ VT NT++ C+ + A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F +M+++G V+TY +I++ + ++ +M G P+A + L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
R +DA+ +E LK GF YN LI + + +++ M EG KP +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+LI+ FG+ + +++ M+E+ L P V TY ++ A V + + ++++M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y +I + A+ E++ D + +N LI C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ E+ +M+++G P +TYN +I+ G + ++ V ++ +M+ GL P T+
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF----KPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++D Y G ++AL+ + K MG P +YN LINA+++ G QA++ +M
Sbjct: 622 VIDAYCSVGELDEALK---LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+ ++P++ N+L E + ++ M E +P+ +T LM+ L D+
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 237 HKV 239
K+
Sbjct: 739 VKL 741
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S+GV P+ + I + K + A ++ + + +N L+ C +
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG------LLPNAV 116
R +L +M + P V+T I+IN++ + D+ ++ +M+ + + +++
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
F TL+D K GR +A E L +K P YN LI+ Y + G + A +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M + +KP+++ +N+++ A M++ ++ +VVTY TL+ A V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
K YE+M+ +GC+PD K L S L +R+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ G+ + +M +IRPD VT LI+ CK+ D A E+F++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 73 QKG------YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ-SQGLLPNAVTFTTLVDVY 125
K + +N +I+ + + + +LL RM+ + PNAVT+ L+D Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++G+ A E + +K KP N ++ + + AV F M EG+K ++
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ +LI+A +A + M E PD Y L+ L +V + H V E+
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 246 MVSSGCTPDRKARAML 261
+ G + D A ML
Sbjct: 537 LKEGGFSLDLLAYNML 552
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 48/287 (16%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N++I FG+ ++ ++ +ER+ S ++ N ++D + G D A ++ EM Q
Sbjct: 156 NLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ 213
Query: 74 KG--YSPCVLTYNIMINSM--GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
K + P +T +I+++ + G +++ L++R S G+ PN+V T + K+
Sbjct: 214 KESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 130 R----------------------FNDALECLE-----------VLK--SMGFKPTPTMYN 154
R FN L CL VLK + +P
Sbjct: 274 RANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 155 ALINAYAQRGLSDQAVNAFRKM----TAEG--LKPSLLALNSLINAFGEDRRDPEAFAVL 208
LIN + D+A+ F KM T +G +K + N+LI+ + R EA +L
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 209 QYMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
MK E P+ VTY L+ R K V M P+
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++ D YN +I A M+ +I P+ + + LID K G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L++EM ++ P V TYN +IN + M S+G P+ VT+ T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + KS R D ++ + G YN LI+ Y Q G + A F +M G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ N L++ + + +A +++ ++++++ D++TY +++ L R DK +
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + G PD A + S L
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGL 474
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P +++ F + N A++ + M P+ V +NT+I+ CK + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E+F M++KG +TYN +I+ + +W + LL M + + PN + FT L+D
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K G +A + + P YN+LIN + G A F M ++G P
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ N+LI F + +R + + M L D TY TL+ + K + V+
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 245 EMVSSGCTPD 254
MV G +PD
Sbjct: 384 RMVDCGVSPD 393
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ D + + ++I F + + L A+A +M+ RP VT +L++ C+
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L M G+ P V+ YN +IN + + ++ M+ +G+ +AVT+ T
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ SGR+ DA L + P + ALI+ + + G +A N +++M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++ NSLIN F +A + M PDVVTY TL+ + +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 241 AVYEEMVSSGCTPD 254
++ EM G D
Sbjct: 345 KLFCEMTYQGLVGD 358
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + P+ F+ +IDTF K L A ++ M+ + P+ T+N+LI+ C G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ +F M KG P V+TYN +I ++ + L M QGL+ +A T+ T
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y ++G+ N A + + G P YN L++ G ++A+ +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+ ++ N +I + EA+ + + + ++PD + Y T++ L R
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M V P+ YN +I+ F CL A F+ M+S+ PD VT+NTLI CK+
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +LF EM +G TYN +I+ K + + RM G+ P+ VT+
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D +G+ AL +E L+ YN +I + +A FR +T +G
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
+KP +A ++I+ EA + + MKE+ P Y
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ K N D + + +M + I D ++ LI C C+ A L +M + G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ P ++T ++N ++ + L+ M G +PN V + T+++ K+ N+AL
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
E ++ G + YN LI+ + G A R M + P+++ +LI+ F
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ EA + + M + P+V TY +L+ +++ MVS GC PD
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
D A + F ML P V + ++ K D L+ +M+ G S + ++ I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I+ + LL +M G P+ VT +L++ + + RF +A+ ++ + G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
F P +YN +IN + + A+ F M +G++ + N+LI+ R +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M + + P+V+ +T L+ ++ + +Y+EM+ P+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K+D L M +P+ V FT ++ V K +F+ + ++++G +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LI+ + + A+ KM G +PS++ L SL+N F + R EA +++ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
P+VV Y T++ L + + V+ M G D L S L
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+ + Y +I + ++ AM +E+ML PD + LI C+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +++++ G+S +L YN++I + ++V ++LT M+ +G P+++T+ T
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +GK F +E ++ G PT T Y A+I+AY G D+A+ F+ M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 181 -LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P+ + N LINAF + +A ++ + MK ++P+V TY L K L + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EMV C P++ +L L
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERL 732
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERM-LSEEIRPDTVTWNTLIDCHCKAGYHD 62
N ++ D +N +ID K L A RM L E P+ VT+N LID +C+AG +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+E+ M++ P V+T N ++ M + M+ +G+ N VT+ TL+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
A+ E + G P +Y ALI+ Q A+ K+ G
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
LLA N LI F + + + +L M++ +PD +TY TL+ + F V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 243 YEEMVSSGCTP 253
E+M G P
Sbjct: 604 MEQMREDGLDP 614
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN +ID + + L+ A RM +EI+P+ VT NT++ C+ + A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F +M+++G V+TY +I++ + ++ +M G P+A + L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
R +DA+ +E LK GF YN LI + + +++ M EG KP +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+LI+ FG+ + +++ M+E+ L P V TY ++ A V + + ++++M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE------IRPDTVTWNTLIDCHCKAG 59
++PD ++I+T K +D A+ FE+M + I+ D++ +NTLID CK G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 YHDRAEELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
AEEL M+ ++ P +TYN +I+ K + ++++RM+ + PN VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T+V + N A+ ++ G K Y LI+A ++A+ + KM
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G P +LI+ + RRD +A V++ +KE D++ Y L+ + K
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 239 VPAVYEEMVSSGCTPD 254
V + +M G PD
Sbjct: 565 VYEMLTDMEKEGKKPD 580
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y +I + A+ E++ D + +N LI C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ E+ +M+++G P +TYN +I+ G + ++ V ++ +M+ GL P T+
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF----KPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++D Y G ++AL+ + K MG P +YN LINA+++ G QA++ +M
Sbjct: 622 VIDAYCSVGELDEALK---LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+ ++P++ N+L E + ++ M E +P+ +T LM+ L D+
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 237 HKV 239
K+
Sbjct: 739 VKL 741
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S+GV P+ + I + K + A ++ + + +N L+ C +
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG------LLPNAV 116
R +L +M + P V+T I+IN++ + D+ ++ +M+ + + +++
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
F TL+D K GR +A E L +K P YN LI+ Y + G + A +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M + +KP+++ +N+++ A M++ ++ +VVTY TL+ A V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
K YE+M+ +GC+PD K L S L +R+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ G+ + +M +IRPD VT LI+ CK+ D A E+F++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 73 QKG------YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ-SQGLLPNAVTFTTLVDVY 125
K + +N +I+ + + + +LL RM+ + +PNAVT+ L+D Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++G+ A E + +K KP N ++ + + AV F M EG+K ++
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ +LI+A +A + M E PD Y L+ L +V + H V E+
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 246 MVSSGCTPDRKARAML 261
+ G + D A ML
Sbjct: 537 LKEGGFSLDLLAYNML 552
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 48/286 (16%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
++I FG+ ++ ++ +ER+ S ++ N ++D + G D A ++ EM QK
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 75 G--YSPCVLTYNIMINSMGAQE--KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
+ P +T +I+++ + + +++ L++R S G+ PN+V T + K+ R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 131 ----------------------FNDALECLE-----------VLK--SMGFKPTPTMYNA 155
FN L CL VLK + +P
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 156 LINAYAQRGLSDQAVNAFRKM----TAEG--LKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
LIN + D+A+ F +M T +G +K + N+LI+ + R EA +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 210 YMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
MK E P+ VTY L+ R K V M P+
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 35/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG- 59
M G +P+ YN +ID K +D+A+ RM + I PD VT+N+LI C +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 60 ----------------YHD------------------RAEELFQEMQQKGYSPCVLTYNI 85
Y D AEE ++EM ++ P ++TY++
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I + + D+ ++ M S+G P+ VT++ L++ Y KS + ++ + G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
Y LI Y + G + A FR+M G+ P+++ N L++ ++ + +A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L M++N + D+VTY +++ + + + +Y + G PD
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + PD +N +ID K + A +E M+ + PD VT++ LI C
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AEE+F M KG P V+TY+I+IN +K + L M +G++ N VT+T
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y ++G+ N A E + G P YN L++ G ++A+ M G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++ N +I + +A+ + + L PD+ TYTT+M L + +
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 241 AVYEEMVSSGCTPD 254
A++ +M G P+
Sbjct: 487 ALFRKMKEDGILPN 500
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 121/250 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P + +++ F + + + A+ F++M+ +P+ V +NT+ID CK+ D A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+L M++ G P V+TYN +I+ + + +W + +++ M + + P+ TF L+D
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K GR ++A E E + P Y+ LI D+A F M ++G P
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ + LIN + + ++ + M + + + VTYT L++ R K + ++
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 245 EMVSSGCTPD 254
MV G P+
Sbjct: 386 RMVFCGVHPN 395
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N++++ F + + L A++ +M+ P VT+ +L++ C+ A +F +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
GY P V+ YN +I+ + ++ D DLL RM+ G+ P+ VT+ +L+ SGR++D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A + + P +NALI+A + G +A + +M L P ++ + LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
R EA + +M PDVVTY+ L+ + K ++ EM G
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
++ ++ K D + +E+M I + T N L++C C+ A +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G+ P ++T+ ++N ++ + +M G PN V + T++D KS + +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+AL+ L ++ G P YN+LI+ G A MT + P + N+LI
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+A ++ R EA + M L PD+VTY+ L+ L + + ++ MVS GC
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 253 PDRKARAML 261
PD ++L
Sbjct: 324 PDVVTYSIL 332
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y M+ +F LD ++ F M+ P ++ L+ K +D L+++MQ
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G + T NI++N + L +M G P+ VTF +L++ + + R
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
DAL + + MG+KP +YN +I+ + D A++ +M +G+ P ++ NSLI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ R +A ++ M + ++ PDV T+ L+ A ++ + + YEEM+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 253 PDRKARAMLRSAL 265
PD ++L L
Sbjct: 289 PDIVTYSLLIYGL 301
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 6/255 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +G +P+ YNV++ K N +D A M ++ PD V++ T+I C+ G
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
EL + + P V YN +IN + + + +L+ M +G+ PN ++++T
Sbjct: 232 VKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT-AE 179
L++V SG+ A L + G P ++L+ RG + A++ + +M
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
GL+P+++A N+L+ F +A +V +M+E P++ TY +L+ +
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 240 PAVYEEMVSSGCTPD 254
++ +M++SGC P+
Sbjct: 407 VYIWNKMLTSGCCPN 421
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G P+ Y +I+ F K LD A+ + +ML+ P+ V + +++ C+
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTFT 119
AE L + M ++ +P V T+N I + + D + +M+ Q PN VT+
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+D K+ R +A + G + + + YN L++ GL A+ KM +
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK--ENDLQPDVVTYTTLMKALIRVDKFH 237
G P + +N +I A+ + + A +L + +PDV++YT ++ L R +
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 238 KVPAVYEEMVSSGCTPDRKARAML 261
+ E M+S+G P ++L
Sbjct: 618 DGVILLERMISAGIVPSIATWSVL 641
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P YN +I+ K + A M+ + I P+ ++++TLI+ C +G + A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 67 LFQEMQQKGYSPCVLTYNIMI-------NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+M ++G P + T + ++ + A + W+Q+ ++ GL PN V +
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM------IRGFGLQPNVVAYN 356
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
TLV + G A+ ++ +G P Y +LIN +A+RG D AV + KM
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G P+++ +++ A + EA ++++ M + + P V T+ +K L +
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 240 PAVYEEM 246
V+ +M
Sbjct: 477 EKVFRQM 483
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
++P+ V +NTL+ C G +A +F M++ G SP + TY +IN + D
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+ +M + G PN V +T +V+ + +F +A +E++ P+ +NA I
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 161 AQRGLSDQAVNAFRKMTAEG-LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
G D A FR+M + P+++ N L++ + R EA+ + + + ++
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 220 VVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
TY TL+ + +M+ G +PD M+ L Y +Q
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI--ILAYCKQ 576
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 112/283 (39%), Gaps = 76/283 (26%)
Query: 50 TLIDCHCKAGYHDRAEELF-----------------------------------QEMQQK 74
++I + + G +RA E+F ++M++
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
G+ P V TYN+++ ++ K D LL M ++G P+AV++TT++ + G +
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
E E F+P ++YNALIN + A R+M +G+ P++++ ++LIN
Sbjct: 236 RELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 195 FGEDRRDPEAFAVL------------------------------------QYMKENDLQP 218
+ AF+ L Q ++ LQP
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+VV Y TL++ K +V+ M GC+P+ + L
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 2/252 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLID-CHCKAG 59
M G+ P+ Y+ +I+ ++ A + +ML P+ T ++L+ C +
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D + Q ++ G P V+ YN ++ + + + + M+ G PN T+
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L++ + K G + A+ + + G P +Y ++ A + +A + M+ E
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHK 238
PS+ N+ I + R A V + M +++ P++VTY L+ L + ++ +
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 239 VPAVYEEMVSSG 250
+ E+ G
Sbjct: 512 AYGLTREIFMRG 523
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 73 QKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAV------------- 116
QK P VL N+ +N + + D++ R++ + +P A+
Sbjct: 14 QKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFK 73
Query: 117 ----TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
TF ++ G+ + L+ +K GF + ++ ++I+ Y Q GL+++AV
Sbjct: 74 HTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEM 133
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
F ++ G PS+ N +++ + R + V + MK + +P+V TY L+KAL +
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+K + EM + GC PD + + S++
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
LT+ +MI + + D V LL +M+ QG + F +++ VY + G A+E
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+K G P+ +YN +++ +R M +G +P++ N L+ A ++ +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 201 DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV----------DKFHKVPAVYEEMVSSG 250
A +L M PD V+YTT++ ++ V ++F V +VY +++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 251 C 251
C
Sbjct: 257 C 257
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++G P+ Y M++ + + A + E M E P T+N I C AG
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 61 HDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEK-----------------WDQVS-- 100
D AE++F++M QQ P ++TYN +++ + + W +
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 101 ----------------DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
L+ +M G P+ +T ++ Y K G+ A + L+ L S
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSC 591
Query: 145 G---FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
G ++P Y +I + + V +M + G+ PS+ + LIN F
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 12/270 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S+ +P+ Y +++ F + + A FE++ + + PD +N L++ + +AGY
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+F MQ G P +YNIM+++ G + M+ G+ P +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 121 LVDVYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
L+ Y K+ D +C ++K M G +P + N+++N Y + G + +M
Sbjct: 410 LLSAYSKA---RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
Query: 178 AEGLKPSLLALNSLINAFGED---RRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+ N LIN +G+ R E F L KE + +PDVVT+T+ + A R
Sbjct: 467 NGPCTADISTYNILINIYGKAGFLERIEELFVEL---KEKNFRPDVVTWTSRIGAYSRKK 523
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+ K V+EEM+ SGC PD +L SA
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ + QPD +N++ID +G+ A + + ++L P T+ LI +C AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 61 HDRAEELFQEMQQKGYSP---CVLTYNIMINS-MGAQEKWDQVSDLLTRMQSQGLLPNAV 116
+RAE + EMQ SP V YN I M + ++ D+ RM+ P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ ++++YGK+ + + + ++S KP Y AL+NA+A+ GL ++A F ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 177 TAEGLKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
+GL+P + N+L+ ++ G E F+++Q+M +PD +Y ++ A R
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM---GCEPDRASYNIMVDAYGRA 382
Query: 234 DKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLK 273
AV+EEM G P K+ +L SA R K
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 119/228 (52%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
+ A+ F+RM + +P T T+N +I+ + KA + +L+ EM+ P + TY +
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
+N+ + ++ ++ ++Q GL P+ + L++ Y ++G A E +++ MG
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
+P YN +++AY + GL A F +M G+ P++ + L++A+ + R + A
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+++ M EN ++PD +++ R+ +F K+ + EM + CT D
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 12/270 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S+ +P+ Y +++ F + + A FE++ + + PD +N L++ + +AGY
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+F MQ G P +YNIM+++ G + M+ G+ P +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 121 LVDVYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
L+ Y K+ D +C ++K M G +P + N+++N Y + G + +M
Sbjct: 432 LLSAYSKA---RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 488
Query: 178 AEGLKPSLLALNSLINAFGED---RRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+ N LIN +G+ R E F L KE + +PDVVT+T+ + A R
Sbjct: 489 NGPCTADISTYNILINIYGKAGFLERIEELFVEL---KEKNFRPDVVTWTSRIGAYSRKK 545
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+ K V+EEM+ SGC PD +L SA
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ + QPD +N++ID +G+ A + + ++L P T+ LI +C AG
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 61 HDRAEELFQEMQQKGYSP---CVLTYNIMINS-MGAQEKWDQVSDLLTRMQSQGLLPNAV 116
+RAE + EMQ SP V YN I M + ++ D+ RM+ P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ ++++YGK+ + + + ++S KP Y AL+NA+A+ GL ++A F ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 177 TAEGLKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
+GL+P + N+L+ ++ G E F+++Q+M +PD +Y ++ A R
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM---GCEPDRASYNIMVDAYGRA 404
Query: 234 DKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLK 273
AV+EEM G P K+ +L SA R K
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 119/228 (52%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
+ A+ F+RM + +P T T+N +I+ + KA + +L+ EM+ P + TY +
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
+N+ + ++ ++ ++Q GL P+ + L++ Y ++G A E +++ MG
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
+P YN +++AY + GL A F +M G+ P++ + L++A+ + R + A
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+++ M EN ++PD +++ R+ +F K+ + EM + CT D
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G + D F+N +I+ F + ++ A+ +M + P T T+NTLI + AG
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 61 HDRAEELFQEMQQKG---YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+R+ EL M ++G P + T+N+++ + ++K ++ +++ +M+ G+ P+ VT
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFK----PTPTMYNALINAYAQRGLSDQAVNAF 173
+ T+ Y + G A EV++ M K P ++ Y + G +
Sbjct: 226 YNTIATCYVQKGETVRAES--EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
R+M ++ +L+ NSLIN F E VL MKE +++ DV+TY+T+M A
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 234 DKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMR 269
K V++EMV +G PD A ++L A Y+R
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSIL--AKGYVR 377
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+R T N LI+ G A+ +F+ + + G+ P +++Y ++ +M Q+++ +S
Sbjct: 45 VRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS 100
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+++ ++ G +++ F +++ + +SG DA++ L +K +G PT + YN LI Y
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 161 AQRGLSDQAVNAFRKMTAEG---LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
G +++ M EG + P++ N L+ A+ + ++ EA+ V++ M+E ++
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 218 PDVVTYTTLMKALIRVDKFHKVPA---VYEEMV 247
PD VTY T+ A V K V A V E+MV
Sbjct: 221 PDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V P+ +NV++ + K ++ A ++M +RPDTVT+NT+ C+ + G RAE
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 -ELFQEMQQKGYS-PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
E+ ++M K + P T I++ + + + RM+ + N V F +L++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ + + E L ++K K Y+ ++NA++ G ++A F++M G+KP
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
A + L + + +A +L+ + +P+VV +TT++ V+
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 244 EEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+M G +P+ K L ++Q K+
Sbjct: 423 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 453
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P+ +++ + + + + RM + + V +N+LI+ + D +E
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ M++ V+TY+ ++N+ + ++ + + M G+ P+A ++ L Y
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
++ A E LE L + +P ++ +I+ + G D A+ F KM G+ P++
Sbjct: 377 RAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 435
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+L+ + E ++ +A VLQ M+ ++P+ T+ L +A
Sbjct: 436 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 1/183 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V+ + +N +I+ F + D M ++ D +T++T+++ AGY
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGY 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A ++F+EM + G P Y+I+ ++ + +LL + + PN V FTT
Sbjct: 346 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTT 404
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + +G +DA+ + G P + L+ Y + +A + M G
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Query: 181 LKP 183
+KP
Sbjct: 465 VKP 467
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V+ D Y+ +++ + ++ A F+ M+ ++PD ++ L + +A
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+AEEL + + + P V+ + +I+ + D + +M G+ PN TF T
Sbjct: 381 PKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQ---AVNAFR 174
L+ Y + + A E L++++ G KP + + L A+ GL+D+ A+NA +
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K+ +P +H YN ++ + +E+ML + PD +T+N ++ + + G
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
DR L EM + G+SP + TYNI+++ + K +LL M+ G+ P + FTTL
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D ++G+ ++ +G P Y +I Y G ++A F++MT +G
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P++ NS+I F + EA A+L+ M+ P+ V Y+TL+ L K +
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 242 VYEEMVSSG 250
V ++MV G
Sbjct: 454 VVKDMVEKG 462
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD + YN+++ N A+ M + P + + TLID +AG
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + E + G +P V+ Y +MI + + ++ ++ M +G LPN T+ +
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + +G+F +A L+ ++S G P +Y+ L+N G +A + M +G
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Query: 181 LKPSLLA 187
L++
Sbjct: 463 HYVHLIS 469
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%)
Query: 39 EEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQ 98
E R ++ L+ + G + L EM + GY T+N++I + G
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARD 205
Query: 99 VSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
V + + ++ P ++ ++ ++ E + GF P YN ++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
A + G +D+ +M +G P L N L++ + A +L +M+E ++P
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
V+ +TTL+ L R K +E V GCTPD
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 2/214 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD YN+++ + D + M+ + PD T+N L+ H G
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH-HLATGN 306
Query: 61 HDRAE-ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A L M++ G P V+ + +I+ + K + + G P+ V +T
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ Y G A E + + G P YN++I + G +A ++M +
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
G P+ + ++L+N + EA V++ M E
Sbjct: 427 GCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 35 RMLSEEIR---PDTVTWNTLIDCHC-KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSM 90
R++ E I+ P T L+ C C +AG E F + + Y P +YN +++S+
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 91 GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
+++ + + +M G P+ +T+ ++ + G+ + L+ + GF P
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQY 210
YN L++ A A+N M G++P ++ +LI+ R + A +
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS---RAGKLEACKYF 349
Query: 211 MKEN---DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M E PDVV YT ++ I + K +++EM G P+
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y+++++ +GK L A F M+ PD VT++ ++D CKAG D A +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+ M P Y++++++ G + + ++ D M+ G+ + F +L+ + K
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ R + L+ +KS G P N ++ +RG D+A + FRKM + +P
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADT 413
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+I F E + A V +YM++ + P + T++ L+ L K + EEM+
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Query: 248 SSGCTPDRKARAMLRSAL 265
G P LR L
Sbjct: 474 EMGIRPSGVTFGRLRQLL 491
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+ +++ + + +D A+ F M ++ P+ V +N L+ CK+ +A+E+F+ M+
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ ++P TY+I++ G + + ++ M G P+ VT++ +VD+ K+GR +
Sbjct: 231 DR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+AL + + KPT +Y+ L++ Y ++AV+ F +M G+K + NSLI
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
AF + R + VL+ MK + P+ + +++ LI + + V+ +M+ C
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CE 408
Query: 253 PDRKARAML 261
PD M+
Sbjct: 409 PDADTYTMV 417
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 5/207 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P Y+V++ T+G N L+ A+ TF M ++ D +N+LI CKA
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ +EM+ KG +P + NI++ + + + D+ D+ +M + P+A T+T ++ ++
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFC 422
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+ A + + ++ G P+ ++ LIN + + +A +M G++PS +
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKE 213
L ++ R+ VL+++ E
Sbjct: 483 TFGRLRQLLIKEERED----VLKFLNE 505
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ Y+++I + L+ A ++M + +P T T+ LI C G D+A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F EM +G P V TY ++I+ + K ++ + + +M + P+ +T+ L++ Y K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
GR A E L V++ KP +N L+ + G +AV+ ++M GL P +++
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N LI+ + A+ +L M D++PD +T+T ++ A + K A M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 248 SSGCTPD 254
G + D
Sbjct: 504 RKGISLD 510
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +P+ H Y V+ID + ++ A +M+ + I P +T+N LI+ +CK G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL M+++ P V T+N ++ + K + LL RM GL P+ V++
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + G N A + L + +P + A+INA+ ++G +D A M +G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 181 L-------------------------------KPSLL----ALNSLINAFGEDRRDPEAF 205
+ K +L +LN +++ + + E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
A+L + + L P VVTYTTL+ LIR + E M SGC P+
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +P+ +N +++ + A+ +RML + PD V++N LID C+ G+
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +L M P LT+ +IN+ Q K D S L M +G+ + VT TT
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K G+ DAL LE L M TP N +++ ++ + + K+ G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L PS++ +L++ +F +L+ MK + P+V YT ++ L + + +
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 241 AVYEEMVSSGCTPD 254
+ M SG +P+
Sbjct: 637 KLLSAMQDSGVSPN 650
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G QP Y V+I +D A F+ M+ +P+ T+ LID C+ G
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + ++M + P V+TYN +IN + +LLT M+ + PN TF
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + G+ A+ L+ + G P YN LI+ + G + A M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P L ++INAF + + A A L M + D VT TTL+ + +V K
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 241 AVYEEMV 247
+ E +V
Sbjct: 532 FILETLV 538
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y+ ++ + K + A T+ RM ++ + + T+++ CK GY + AE ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 73 QKGY------------------------------------SPCVLTYNIMINSMGAQEKW 96
+ G+ +P ++Y+I+I+ + +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 97 DQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL 156
++ L +M +G P+ T+T L+ G + A + + G KP Y L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 157 INAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
I+ + G ++A RKM + + PS++ N+LIN + +D R AF +L M++
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 217 QPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+P+V T+ LM+ L RV K +K + + M+ +G +PD
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG+ PD YNV+ID + ++ A M +I PD +T+ +I+ CK G
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A M +KG S +T +I+ + K +L + +L +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D+ K + + L L + +G P+ Y L++ + G + M G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P++ +IN + R EA +L M+++ + P+ VTYT ++K + K +
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 241 AVYEEMVSSG 250
MV G
Sbjct: 672 ETVRAMVERG 681
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 17/273 (6%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQE 70
H NV++D K + +A ++ + P VT+ TL+D ++G + + +
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
M+ G P V Y I+IN + + ++ LL+ MQ G+ PN VT+T +V Y +G+
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAY--AQRGLSDQAVNAFRKMTAEGLKPSLL-A 187
+ ALE + + G++ +Y++L+ + +Q+G+ + + + P +
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKE------NDLQPDVV--------TYTTLMKALIRV 233
L S++ G F V + KE NDL +V+ +M++
Sbjct: 727 LISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSK 786
Query: 234 DKFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
K K + ++ SG P K+ ++ L+
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLK 819
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ P Y V++D K D A + RM + +T+ +ID CK G+
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L EM + G P ++TY+ +IN ++ +++ R+ GL PN + ++T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + G +A+ E + G +N L+ + + G +A R MT++G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR------VD 234
+ P+ ++ + LIN +G +AF+V M + P TY +L+K L + +
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 235 KF----HKVPA-----VYEEMVSSGCTPDRKARAM 260
KF H VPA +Y ++++ C A+A+
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 114/265 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NGV R Y MID K LD A+ M + I PD VT++ LI+ CK G
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+E+ + + G SP + Y+ +I + + + M +G + TF
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV K+G+ +A E + + S G P ++ LIN Y G +A + F +MT G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P+ SL+ + EA L+ + D V Y TL+ A+ + K
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++ EMV PD L S L
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGL 698
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +G P YN ++ + K A+ + M S+ + D T+N LI C++
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ L ++M+++ P +TYN +IN + K S LL M S GL PN VTF
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + G F +AL+ ++++ G P+ Y L++ + D A + +M G
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + +I+ ++ EA +L M ++ + PD+VTY+ L+ +V +F
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Query: 241 AVYEEMVSSGCTPD 254
+ + G +P+
Sbjct: 499 EIVCRIYRVGLSPN 512
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS GV D YN++I + N + M I P+ VT+NTLI+ G
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L EM G SP +T+N +I+ ++ + + + M+++GL P+ V++
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K+ F+ A +K G Y +I+ + G D+AV +M+ +G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P ++ ++LIN F + R A ++ + L P+ + Y+TL+ R+ +
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+YE M+ G T D +L ++L
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ PD +N++I+ + + ++M P VT+NT++ +CK G A
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
EL M+ KG V TYN++I+ + + + LL M+ + + PN VT+ TL++ +
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
G+ A + L + S G P +NALI+ + G +A+ F M A+GL PS
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
++ L++ ++ A MK N + +TYT ++ L + + + E
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 246 MVSSGCTPD 254
M G PD
Sbjct: 469 MSKDGIDPD 477
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P + N ++ + K + + ML +I PD T+N LI+ C G +++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L Q+M++ GY+P ++TYN +++ + ++ +LL M+S+G+ + T+ L+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+S R L ++ P YN LIN ++ G A +M + GL P+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N+LI+ + EA + M+ L P V+Y L+ L + +F Y
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 245 EMVSSGCTPDR 255
M +G R
Sbjct: 433 RMKRNGVCVGR 443
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y+++I + + + ++ F M P T N ++ K+G +EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++ P V T+NI+IN + A+ +++ S L+ +M+ G P VT+ T++ Y K GRF
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A+E L+ +KS G YN LI+ + + R M + P+ + N+LI
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N F + + A +L M L P+ VT+ L+ I F + ++ M + G T
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 253 PDRKARAMLRSAL 265
P + +L L
Sbjct: 406 PSEVSYGVLLDGL 418
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 1/264 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P Y ++ K L A + + + DTV +NTL+ CK+G
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG-LLPNAVTFT 119
+A LF EM Q+ P TY +I+ + + K +++G +LPN V +T
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
VD K+G++ + E + ++G P NA+I+ Y++ G ++ + +M +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P+L N L++ + + + +F + + + N + PD +T +L+ + +
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 240 PAVYEEMVSSGCTPDRKARAMLRS 263
+ + + G DR ML S
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLIS 872
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 125/327 (38%), Gaps = 72/327 (22%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG--------- 59
D YN ++ K L A++ F M+ I PD+ T+ +LI C+ G
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 60 ---------------YHDRAEELFQEMQQK------------GYSPCVLTYNIMINSMGA 92
Y + +F+ Q K G++P ++T N MI+
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK----------------SGRFNDALE 136
K ++ +DLL M +Q PN T+ L+ Y K +G D L
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 137 C----------------LEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
C L++LK+ G + +N LI+ G + A + + MT
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+ G+ +++++ + R E+ VL M + + P+ Y L+ L RV
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 238 KVPAVYEEMVSSG-CTPDRKARAMLRS 263
V EEM++ C P+ AM+R+
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRA 978
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 102/220 (46%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN+++ + K + + + ++ I PD +T ++L+ C++ + ++
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+ +G T+N++I+ A + + DL+ M S G+ + T +V V +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ RF ++ L + G P Y LIN + G A +M A + P +A
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
++++ A + + EA +L++M + L P + ++TTLM
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG+ PD+ + ++ + N L+ + + + + D T+N LI C G +
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A +L + M G S T + M++ + ++ + +L M QG+ P + + L++
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ G A E + + P +A++ A A+ G +D+A R M L P
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
++ + +L++ ++ EA + M L+ D+V+Y L+ L +Y
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Query: 244 EEMVSSGCTPDRKA-RAMLRSAL 265
EEM G + +A++R L
Sbjct: 1063 EEMKGDGFLANATTYKALIRGLL 1085
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 36/287 (12%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G D +NV++ + K + A M S+ I P+TV+++ LI+ + +G +A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 65 EELFQEMQQKGYSPCVLT-----------------------------------YNIMINS 89
+F EM + G+ P T YN ++ +
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG-FKP 148
M + L M + +LP++ T+T+L+ + G+ A+ + ++ G P
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
MY ++ + G + +M G P ++ N++I+ + + + +L
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
M + P++ TY L+ + +Y ++ +G PD+
Sbjct: 783 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+ D+ + M+ + + + M + I P++ + LI+ C+ G
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +EM P + + M+ ++ K D+ + LL M L+P +FTT
Sbjct: 950 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTT 1009
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K+G +ALE V+ + G K YN LI +G A + +M +G
Sbjct: 1010 LMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1069
Query: 181 LKPSLLALNSLINAF 195
+ +LI
Sbjct: 1070 FLANATTYKALIRGL 1084
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N + L+ VY + G D+LE ++ GF P+ NA++ + + G D +V +F
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSF 220
Query: 174 -RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
++M + P + N LIN + ++ ++Q M+++ P +VTY T++ +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+F + + M S G D ML
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNML 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ Y +I+ + + A E M++ +I P V + ++ K G
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L + M + P + ++ +++ + +L M + GL + V++
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
L+ G A E E +K GF T Y ALI R
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ + + Y++ I+ F + + L A+A +M+ P VT N+L++ C
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +M + GY P +T+ +++ + K + L+ RM +G P+ VT+
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ K G + AL L ++ + +YN +I+ + D A + F KM +G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP + N LI+ R +A +L M E ++ PD+V + L+ A ++ K +
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 241 AVYEEMVSSG-CTPDRKA-RAMLRSALRYMR 269
+Y+EMV S C PD A +++ +Y R
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERML-SEEIRPDTVTWNTLIDCHCKAG 59
M + PD F+N +ID F K L A ++ M+ S+ PD V +NTLI CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ E+F+EM Q+G +TY +I+ D + +M S G+ P+ +T+
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+D +G AL E ++ K Y +I A + G + + F ++ +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+KP+++ ++++ F EA A+ MKE+ P+ TY TL++A +R
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSALR 266
+ +EM S G D ++ + L
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ F M+ P V ++ L+ K D L ++MQ G S + TY+I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
IN + + +L +M G P+ VT +L++ + R ++A+ ++ + MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE-A 204
++P + L++ Q + +AV +M +G +P L+ ++IN + R +P+ A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-RGEPDLA 234
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L M++ ++ DVV Y T++ L + ++ +M + G PD
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%)
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
K D L M P+ V F+ L+ K +F+ + E ++++G Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
IN + +R A+ KM G PS++ LNSL+N F R EA A++ M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
QPD VT+TTL+ L + +K + A+ E MV GC PD
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + Y +I F + D+A F++M+S+ + PD +T+N L+D C G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +F+ MQ++ ++TY MI ++ K + DL + +G+ PN VT+TT
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + + G +A +K G P YN LI A + G + ++M + G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+ N + R D +L
Sbjct: 562 FAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 129/265 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ P+ Y+ +I K L A M S++I P+ +T++ LID + K G
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + +++ M Q P V TY+ +I + + D+ +L M S+G PN VT++T
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L + + KS R +D ++ L+ + G N LI Y Q G D A+ F MT+ G
Sbjct: 194 LANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG 253
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P++ + N ++ + +A + ++M++ D++TYT ++ + + +
Sbjct: 254 LIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAY 313
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ ++ PD KA ++ + L
Sbjct: 314 DLFYKLKFKRVEPDFKAYTIMIAEL 338
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++ D ++IDT K + A+ +RM I P+ VT+++LI CK+G
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE EM K +P V+T++ +I++ + K +V + M + PN T+++
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ R ++A++ L+++ S G P Y+ L N + + D + M G
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + ++ N+LI + + + A V YM N L P++ +Y ++ L + K
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Query: 241 AVYEEM 246
+ +E M
Sbjct: 279 SRFEHM 284
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++PD + +++ F N + A+ +M I+ D V LID CK A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E+ + M+ +G SP V+TY+ +I + + L M S+ + PN +TF+ L+D
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y K G+ + +++ M P Y++LI D+A+ M ++G P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ ++L N F + R + +L M + + + V+ TL+K + K V+
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 245 EMVSSGCTPDRKARAMLRSAL 265
M S+G P+ ++ ++ + L
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGL 268
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%)
Query: 35 RMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQE 94
+M+ I PD VT ++L++ C + A + +M++ G V+ I+I+++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
++L RM+ +G+ PN VT+++L+ KSGR DA L + S P ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
ALI+AYA+RG + + ++ M + P++ +SLI R EA +L M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
P+VVTY+TL + + + ++M G +
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 103 LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
+ +M G+ P+ VT ++LV+ + S DA+ ++ MG K + LI+ +
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
L A+ ++M G+ P+++ +SLI + R +A L M + P+V+T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ L+ A + K KV +VY+ M+ P+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 152
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G P+ Y+ + + F K + +D + + M + +TV+ NTLI + +AG
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +F M G P + +YNI++ + A + ++ MQ + +T+T
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
++ K+ +A + LK +P Y +I + G+ +A
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++P+ + Y+++ID + + +A+ M S I + V + T+I+ CK G +A
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 65 EELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
EL M ++K ++YN +I+ + + D M G+ PN +T+T+L++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K+ R + ALE + +K+ G K Y ALI+ + +R + A F ++ EGL P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
S NSLI+ F A + + M ++ L+ D+ TYTTL+ L++ +Y
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 244 EEMVSSGCTPDRKARAMLRSALRYMRQTLK 273
EM + G PD ++ + L Q +K
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN +ID F K +D A+A +E M I P+ +T+ +L++ CK D+A E+ EM+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
KG + Y +I+ + + S L + + +GL P+ + +L+ + G
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
AL+ + + G + Y LI+ + G A + +M A GL P + ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N + + + + + MK+N++ P+V+ Y ++ R + +++EM+ G
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Query: 253 PD 254
PD
Sbjct: 827 PD 828
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG+ P+ Y +++ K N +D A+ + M ++ ++ D + LID CK
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A LF E+ ++G +P YN +I+ DL +M GL + T+TT
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K G A E ++++G P +Y ++N +++G + V F +M
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
+ P++L N++I + EAF + M + + PD T+ L+ +
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ P + +I + K + A+ F+ E + NT++ CK G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF-ETGLANVFVCNTILSWLCKQGK 458
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A EL +M+ +G P V++YN ++ Q+ D + + + +GL PN T++
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D ++ +ALE + + S + +Y +IN + G + +A M E
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 181 -LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
L S ++ NS+I+ F ++ A A + M N + P+V+TYT+LM L + ++ +
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 240 PAVYEEMVSSGCTPDRKARAML 261
+ +EM + G D A L
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGAL 660
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P + Y +I K +D A+ + MLS+ I + V +LI HCK A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F +M+++G SP +T++++I + ++ + +M+ GL P+ T++ + K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ +AL+ + G + N +++ ++G +D+A KM + G+ P++++
Sbjct: 422 GQKHEEALKLFDESFETGLANV-FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N+++ + A V + E L+P+ TY+ L+ R V M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 248 SSGCTPDRKARAMLRSALRYMRQTLKS 274
SS + + + L + QT K+
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKA 567
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 2/228 (0%)
Query: 28 HAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYS-PCVLTYNIM 86
A+ R + PD++ ++ + CK A L +EM++K P TY +
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
I + Q D L M S G+ N V T+L+ + K+ AL + ++ G
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
P ++ LI + + G ++A+ ++KM GL PS+ ++++I + + ++ EA
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ E L +V T++ L + K + + +M S G P+
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
KS G + + +N +++ + K DHA+ +ML ++ P N + +
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL 214
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A+EL+ M G +T +++ + +EK + ++L+R +G P+++ ++
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 122 VDVYGKSGRFNDALECLEVLKSMGF-KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
V K+ A L +K P+ Y ++I A ++G D A+ +M ++G
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ +++A SLI ++ A + M++ P+ VT++ L++ + + K
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 241 AVYEEMVSSGCTP 253
Y++M G TP
Sbjct: 395 EFYKKMEVLGLTP 407
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD YNV+++ + N L A M+ I+ D ++N L+ HC+ +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 61 HDRAEE-LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D+ + +EM+ +G+ V++Y+ +I + + L M+ +G++ N VT+T
Sbjct: 306 PDKCYNFMVKEMEPRGFCD-VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+ + + G + A + L+ + +G P Y +++ + G D+A F M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P ++ NSLI+ R EA + + MK + PD +T+ ++ LIR K
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 240 PAVYEEMVSSGCTPDR 255
V+++M+ G T DR
Sbjct: 485 YKVWDQMMDKGFTLDR 500
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 10/234 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNC-LDHAMATFERMLSEEIRP----DTVTWNTLIDCH 55
M +G+Q D + YN ++ K +C + H + M+ +E+ P D V+++TLI+
Sbjct: 281 MVRSGIQLDAYSYNQLL----KRHCRVSHPDKCYNFMV-KEMEPRGFCDVVSYSTLIETF 335
Query: 56 CKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
C+A +A LF+EM+QKG V+TY +I + + LL +M GL P+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+ +TT++D KSG + A + P YN+LI+ + G +A+ F
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
M + P L +I ++ A+ V M + D TL+KA
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATF-ERMLSEEIRPDTVTWNTLIDCHCKAG 59
M +GV PD ++ +D A E + S ++ TV +N LI CKAG
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
++AE L M + G P ++TYN+++N + ++ M G+ +A ++
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 120 TLVDVYGKSGRFNDALECLE-VLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
L+ + R + +C ++K M GF + Y+ LI + + + +A F +
Sbjct: 295 QLLK---RHCRVSHPDKCYNFMVKEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEE 350
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M +G+ +++ SLI AF + A +L M E L PD + YTT++ L +
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
K V+ +M+ TPD + L S L
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 1/246 (0%)
Query: 10 RHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQ 69
R Y I K +D+A+ F+ M R + +N I + + AE ++
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 70 EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
+M+ G+S TY+ I+ + +K+D + LL+ M++ G +P+ F +D+ +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
+ A++ + G +P Y LIN + G AV + M G+ P A
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 190 SLINAFGEDRRDPEAFA-VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
+L+ R+ A+ V + +K ++ V Y L+ + + K A+ M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 249 SGCTPD 254
GC PD
Sbjct: 249 IGCEPD 254
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 121/291 (41%), Gaps = 36/291 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G PD +NV +D + N + A+ TF M+ PD V++ LI+ +AG
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT-RMQSQGLLPNAVTFT 119
A E++ M + G SP ++ + K D +++ ++S + + V +
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ + K+GR A + +G +P YN L+N Y + +A +M
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 180 GLK-----------------------------------PSLLALNSLINAFGEDRRDPEA 204
G++ +++ ++LI F +A
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ + + M++ + +VVTYT+L+KA +R + ++M G +PDR
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 22 KFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVL 81
KF+ +D ++ E + PD +N +D C+ A + F M Q+G P V+
Sbjct: 94 KFDLIDALLSDMETL---GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVV 150
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL-EV 140
+Y I+IN + K ++ M G+ P+ LV + + + A E + E
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+KS K + +YNALI+ + + G ++A M+ G +P L+ N L+N + ++
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 201 DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
A V+ M + +Q D +Y L+K RV
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 4/193 (2%)
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
L Y I ++ D + M+ + + + V + RF A
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+K MGF P Y+ I+ + D M G P + A N ++ R
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC--RE 127
Query: 201 DPEAFAVLQY--MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKAR 258
+ FAV + M + +PDVV+YT L+ L R K ++ M+ SG +PD KA
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 259 AMLRSALRYMRQT 271
A L L + R+
Sbjct: 188 AALVVGLCHARKV 200
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 36/301 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTW------------ 48
M +GV+PD YN++ F + A ML + + PD +T+
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 49 ------------------NTLIDCH------CKAGYHDRAEELFQEMQQKGYSPCVLTYN 84
N++I C CK G D A LF +M+ G SP ++ Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I+I+ + K+D L M + +LPN+ T L+ + G +A L+ L S
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G +YN +I+ YA+ G ++A+ F+ + G+ PS+ NSLI + + + EA
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+L +K L P VV+YTTLM A + + EM + G P +++
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Query: 265 L 265
L
Sbjct: 583 L 583
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
+ H Y+ ++D + L+ A+ ++I P V++N+++ +CK G+ D A+ F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
+ + G P V ++NI+IN + + +L + M G+ P++VT+ L +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK-PSLLA 187
G + A E + + G P Y L+ Q G D + + M + G + S++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+ +++ + R EA ++ MK + L PD+V Y+ ++ L ++ KF +Y+EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 248 SSGCTPDRKARAMLRSAL 265
P+ + L L
Sbjct: 426 DKRILPNSRTHGALLLGL 443
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK++G+ PD Y+++I K D A+ ++ M + I P++ T L+ C+ G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L + G + ++ YNI+I+ ++ +L + G+ P+ TF +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ +A + L+V+K G P+ Y L++AYA G + R+M AEG
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQY------------MKENDLQPDVVTYTTLMK 228
+ P+ + + + + VL+ M+ + PD +TY T+++
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Query: 229 ALIRVDKFHKVPAVYEEMVS 248
L RV E M S
Sbjct: 629 YLCRVKHLSGAFVFLEIMKS 648
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
+VM+ K +D A++ F +M ++ + PD V ++ +I CK G D A L+ EM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
K P T+ ++ + + + LL + S G + V + ++D Y KSG +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
ALE +V+ G P+ +N+LI Y + +A + GL PS+++ +L++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
A+ + + MK + P VTY+ + K L R K V E + C
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK----- 57
S+G D YN++ID + K C++ A+ F+ ++ I P T+N+LI +CK
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 58 ------------------------------AGYHDRAEELFQEMQQKGYSPCVLTYNIMI 87
G +EL +EM+ +G P +TY+++
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 88 NSMGAQEKWDQVSDLLTR------------MQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ K + + +L M+S+G+ P+ +T+ T++ + + A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
LE++KS + YN LI++ G +A + + + + S A +LI A
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 196 GEDRRDPE-AFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+ DPE A + + + Y+ ++ L R
Sbjct: 701 CV-KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH----DRAEELFQEMQQKGYSPCVL 81
+D ++ ++M + + T ++N+++ YH D+ ++++E++ K
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVL-------YHFRETDKMWDVYKEIKDKNEH---- 188
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
TY+ +++ + Q+K + L + + + P+ V+F +++ Y K G + A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
G P+ +N LIN G +A+ M G++P + N L F
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
A+ V++ M + L PDV+TYT L+ ++ + ++M+S G
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKF----NCLDHAMA--TFER-------MLSEEIRPDTVT 47
MK+ G+ P Y+V+ + NC +H + FE+ M SE I PD +T
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENC-NHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 48 WNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ 107
+NT+I C+ + A + M+ + TYNI+I+S+ + + +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 108 SQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
Q + + +TTL+ + G A++ L GF + Y+A+IN +R L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + + Y ++ LD A + M++ RP+ V + TLI +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +EM+++G +P + YN +I + ++ D+ L M GL PNA T+
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ Y ++ F A + ++ ++ G P + LIN Y ++G +A +A+R M +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ L+N ++ + +A + + M+ + PDV +Y L+ ++ K
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 241 AVYEEMVSSGCTPDRKARAML 261
++++EMV G TP+ ML
Sbjct: 648 SIFDEMVEEGLTPNVIIYNML 668
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 9/280 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ PD Y V+I+ F K + A + F+ M+ E + P+ + +N L+ C++G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A+EL EM KG P +TY +I+ + L M+ +GL+P++ +TT
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 121 LVDVYGKSGRFNDALECLEVLKS--MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
LVD R ND + + + G + +NALIN + G ++ ++
Sbjct: 738 LVD---GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 179 EGL----KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
KP+ + N +I+ ++ A + M+ +L P V+TYT+L+ ++
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+ ++ V++E +++G PD +++ +A T K+
Sbjct: 855 RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 109/254 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++G +P+ Y +I TF + + AM + M + I PD +N+LI KA
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A EM + G P TY I+ ++ + M+ G+LPN V T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y K G+ +A + G Y L+N + D A FR+M +G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + + LIN F + +A ++ M E L P+V+ Y L+ R + K
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 241 AVYEEMVSSGCTPD 254
+ +EM G P+
Sbjct: 683 ELLDEMSVKGLHPN 696
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ PD YN +I K +D A + M+ ++P+ T+ I + +A
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++ +EM++ G P + +IN + K + M QG+L +A T+T
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ K+ + +DA E ++ G P Y LIN +++ G +A + F +M EG
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+++ N L+ F +A +L M L P+ VTY T++ + +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 241 AVYEEMVSSGCTPD 254
+++EM G PD
Sbjct: 718 RLFDEMKLKGLVPD 731
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+G+ + Y+ I K ++ A A F+ M++ + P + +LI+ +C+
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ EL EM+++ TY ++ M + D +++ M + G PN V +TT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + ++ RF DA+ L+ +K G P YN+LI ++ D+A + +M G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
LKP+ + I+ + E A ++ M+E + P+ V T L+ + K +
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+ Y MV G D K +L + L
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGL 602
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P ++ Y+V+ID K L+ A + M S + D T++ LID K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+ L EM G + Y+ I M + ++ L M + GL+P A + +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y + E L +K +P Y ++ G D A N ++M A G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P+++ +LI F ++ R +A VL+ MKE + PD+ Y +L+ L + + +
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 241 AVYEEMVSSGCTPD 254
+ EMV +G P+
Sbjct: 508 SFLVEMVENGLKPN 521
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GV D H Y+++ID K D A M+S I ++ I K G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A+ LF M G P Y +I ++ Q +LL M+ + ++ + T+ T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V SG + A ++ + + G +P +Y LI + Q A+ ++M +G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + NSLI + +R EA + L M EN L+P+ TY + I +F
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 241 AVYEEMVSSGCTPDR 255
+EM G P++
Sbjct: 543 KYVKEMRECGVLPNK 557
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 120/274 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG++P+ Y I + + + A + M + P+ V LI+ +CK G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ++ M +G TY +++N + +K D ++ M+ +G+ P+ ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ + K G A + + G P +YN L+ + + G ++A +M+ +G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+ + ++I+ + + EAF + MK L PD YTTL+ R++ +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
++ + A++ ++ + LK+
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 23/262 (8%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH------------- 61
V++D ++N LD ++ M+ + D T++ LI HC+AG
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 62 --------DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLP 113
D A +L + M KG P TY+++I+ + ++ + LL M S G+
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 114 NAVTFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
+ T++ L+D K GR DA + L + S G P MY+ I ++ G+ ++A
Sbjct: 311 DNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
F M A GL P A SLI + ++ + + +L MK+ ++ TY T++K +
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 233 VDKFHKVPAVYEEMVSSGCTPD 254
+ +EM++SGC P+
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPN 451
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ PD Y ++D + N ++ A+ F + T +N LI+ K G
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGK 781
Query: 61 HDRAEELFQEMQQKGY----SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
+ E+ + + P +TYNIMI+ + + + +L +MQ+ L+P +
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+T+L++ Y K GR + + + G +P MY+ +INA+ + G++ +A+ +M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 177 TA-----EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
A +G K S+ +L++ F + A V++ M PD T L+
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTW------------ 48
M +GV+PD YN++ F + A ML + + PD +T+
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 49 ------------------NTLIDCH------CKAGYHDRAEELFQEMQQKGYSPCVLTYN 84
N++I C CK G D A LF +M+ G SP ++ Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I+I+ + K+D L M + +LPN+ T L+ + G +A L+ L S
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G +YN +I+ YA+ G ++A+ F+ + G+ PS+ NSLI + + + EA
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+L +K L P VV+YTTLM A + + EM + G P
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
+ H Y+ ++D + L+ A+ ++I P V++N+++ +CK G+ D A+ F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
+ + G P V ++NI+IN + + +L + M G+ P++VT+ L +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK-PSLLA 187
G + A E + + G P Y L+ Q G D + + M + G + S++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+ +++ + R EA ++ MK + L PD+V Y+ ++ L ++ KF +Y+EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 248 SSGCTPDRKARAMLRSAL 265
P+ + L L
Sbjct: 426 DKRILPNSRTHGALLLGL 443
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK++G+ PD Y+++I K D A+ ++ M + I P++ T L+ C+ G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L + G + ++ YNI+I+ ++ +L + G+ P+ TF +
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K+ +A + L+V+K G P+ Y L++AYA G + R+M AEG
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQY------------MKENDLQPDVVTYTTLMK 228
+ P+ + + + + VL+ M+ + PD +TY T+++
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Query: 229 ALIRVDKFHKVPAVYEEMVS 248
L RV E M S
Sbjct: 629 YLCRVKHLSGAFVFLEIMKS 648
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
+VM+ K +D A++ F +M ++ + PD V ++ +I CK G D A L+ EM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
K P T+ ++ + + + LL + S G + V + ++D Y KSG +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
ALE +V+ G P+ +N+LI Y + +A + GL PS+++ +L++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
A+ + + MK + P VTY+ + K L R K V E + C
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P +N ++ + K +D A + F +L + P + N LI+ C G A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMG----AQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
EL +M + G P +TYNI+ W+ + D+L + GL P+ +T+T L
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK----GLSPDVITYTIL 333
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTM-YNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + G + L L+ + S GF+ + + +++ + G D+A++ F +M A+G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P L+A + +I+ + + A + M + + P+ T+ L+ L + +
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 241 AVYEEMVSSGCTPD 254
++ + ++SSG T D
Sbjct: 454 SLLDSLISSGETLD 467
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK----- 57
S+G D YN++ID + K C++ A+ F+ ++ I P T+N+LI +CK
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 58 ------------------------------AGYHDRAEELFQEMQQKGYSPCVLTYNIMI 87
G +EL +EM+ +G P +TY+++
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 88 NSMGAQEKWDQVSDLLTR------------MQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ K + + +L M+S+G+ P+ +T+ T++ + + A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
LE++KS + YN LI++ G +A + + + + S A +LI A
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 196 GEDRRDPE-AFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+ DPE A + + + Y+ ++ L R
Sbjct: 701 CV-KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH----DRAEELFQEMQQKGYSPCVL 81
+D ++ ++M + + T ++N+++ YH D+ ++++E++ K
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVL-------YHFRETDKMWDVYKEIKDKNEH---- 188
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
TY+ +++ + Q+K + L + + + P+ V+F +++ Y K G + A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
G P+ +N LIN G +A+ M G++P + N L F
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
A+ V++ M + L PDV+TYT L+ ++ + ++M+S G
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKF----NCLDHAMA--TFER-------MLSEEIRPDTVT 47
MK+ G+ P Y+V+ + NC +H + FE+ M SE I PD +T
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENC-NHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 48 WNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ 107
+NT+I C+ + A + M+ + TYNI+I+S+ + + +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 108 SQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
Q + + +TTL+ + G A++ L GF + Y+A+IN +R L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 70/335 (20%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK GV+ + Y++MI+ F K +A A FE M+ E ++PD + +N +I C G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 61 HDRAEELFQEMQQ--------------KGYS---------------------PCVLTYNI 85
DRA + +EMQ+ GY+ P V T+N
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 86 MINSMGAQEKWDQVSDLL-----------------------------------TRMQSQG 110
+IN + + + ++ ++L TR+Q++G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
L + T+ L+ KSGR AL + + + +YN LI+ +A+RG +A
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 171 NAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ ++M EG+KP + S I+A + A ++ M+ ++P++ TYTTL+K
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
R K + YEEM + G PD+ L ++L
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 39/290 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G+ P Y +I + +D A++ +M E I VT++ ++ KAG+
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 61 H-----------------------------------DRAEELFQEMQQKGYSPCVLTYNI 85
+RAE L +EM+++G + Y+
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 86 MIN--SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS 143
M++ +M A EK V + R++ G P VT+ L+++Y K G+ + ALE V+K
Sbjct: 455 MMDGYTMVADEKKGLV--VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 144 MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
G K Y+ +IN + + A F M EG+KP ++ N++I+AF
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
A ++ M++ +P T+ ++ + + V++ M GC P
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV + H Y ++ + A F R+ +E + D T+ L+ CK+G A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ +EM + YNI+I+ + + +DL+ +M+ +G+ P+ T+T+ +
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K+G N A + +E ++++G KP Y LI +A+ L ++A++ + +M A G+KP
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 185 LLALNSLINAFGEDRRDPEAF------AVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+ L+ + EA+ + + M E L D+ T K L +++
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIE 889
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ Y+ M+D + + F+R+ P VT+ LI+ + K G
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A E+ + M+++G + TY++MIN + W + M +G+ P+ + +
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + G + A++ ++ ++ + +PT + +I+ YA+ G +++ F M G
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P++ N LIN E R+ +A +L M + + TYT +M+ V K
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 679
Query: 241 AVYEEMVSSGCTPD 254
+ + + G D
Sbjct: 680 EYFTRLQNEGLDVD 693
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G P Y +I+ + K + A+ M E ++ + T++ +I+ K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F++M ++G P V+ YN +I++ D+ + MQ P TF
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y KSG +LE ++++ G PT +N LIN ++ ++AV +MT G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + ++ + +AF ++ L D+ TY L+KA + +
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 241 AVYEEM 246
AV +EM
Sbjct: 715 AVTKEM 720
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P R + +M+ +G+ + A TFERM + I P + + +LI + D A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 67 LFQEMQQKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
++M+++G ++TY++++ G E D D R+ NA + ++
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT---LNASIYGKIIY 422
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ ++ A + ++ G +Y+ +++ Y + + F+++ G P
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ LIN + + + +A V + MKE ++ ++ TY+ ++ +++ + AV+
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 244 EEMVSSGCTPD 254
E+MV G PD
Sbjct: 543 EDMVKEGMKPD 553
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
++ A A M E I ++T++D + + +F+ +++ G++P V+TY
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+IN K + ++ M+ +G+ N T++ +++ + K + +A E + G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF---GEDRRDP 202
KP +YN +I+A+ G D+A+ ++M +P+ +I+ + G+ RR
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 203 EAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
E F + M+ P V T+ L+ L+ + K + +EM +G + +
Sbjct: 610 EVFDM---MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 90/224 (40%), Gaps = 35/224 (15%)
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+K P + +M+ G + + + RM+++G+ P + +T+L+ Y +
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA-------------VNA------- 172
+AL C+ +K G + + Y+ ++ +++ G ++ A +NA
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 173 ---------------FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
R+M EG+ + +++++ + + + V + +KE
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
P VVTY L+ +V K K V M G + K +M+
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 7/255 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V PD + +N +++ + K + A ++ PD T+ + I HC+ D A
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAF 210
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++F+EM Q G ++Y +I + +K D+ LL +M+ PN T+T L+D
Sbjct: 211 KVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
SG+ ++A+ + + G KP MY LI ++ D+A M GL P++
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI---RVDKFHKVPAV 242
+ N+LI F + + +A +L M E +L PD++TY TL+ +D +++ ++
Sbjct: 331 ITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSL 389
Query: 243 YEEMVSSGCTPDRKA 257
EE SG P+++
Sbjct: 390 MEE---SGLVPNQRT 401
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN ++ + +F ++ + ML + + PD T+NTL++ +CK GY A++ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
Q G P TY I +++ D + M G N V++T L+ ++ + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+AL L +K P Y LI+A G +A+N F++M+ G+KP LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+F EA +L++M EN L P+V+TY L+K + HK + +M+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 253 PD 254
PD
Sbjct: 362 PD 363
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 1/184 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG + Y +I + +D A++ +M + P+ T+ LID C +G
Sbjct: 216 MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQ 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LF++M + G P Y ++I S + + D+ S LL M GL+PN +T+
Sbjct: 276 KSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNA 335
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K + A+ L + P YN LI G D A M G
Sbjct: 336 LIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Query: 181 LKPS 184
L P+
Sbjct: 395 LVPN 398
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G++PD Y V+I +F + LD A E ML + P+ +T+N LI CK
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
H +A L +M ++ P ++TYN +I + D LL+ M+ GL+PN T
Sbjct: 346 H-KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
V +Y ++ + +QE +V + M N+V V + ++ R D+ E
Sbjct: 60 VTSYASLVTLLCSQEIPYEVPKITILMIKSC---NSVRDALFVVDFCRTMRKGDSFE--- 113
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
+ +K TP YN L+++ A+ GL ++ + +M + + P + N+L+N + +
Sbjct: 114 ----IKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
EA + ++ + PD TYT+ + R + V++EM +GC
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++P+ Y+++ID F + LD A++ M+ ++ +N+LI+ HCK G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE EM K P V+TY ++ ++ K ++ L M +G+ P+ TFTT
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ ++G DA++ + KP YN +I Y + G +A ++MT +G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P + LI+ + EA + + + + + + + YT L+ R K +
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 241 AVYEEMVSSGCTPD 254
+V +EMV G D
Sbjct: 633 SVCQEMVQRGVDLD 646
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ G + YNV+ID K + A+ + + ++++PD VT+ TL+ CK
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E+ EM +SP + ++ + + K ++ +L+ R+ G+ PN +
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D K +F++A + + +G +P Y+ LI+ + +RG D A++ +M G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 181 LKPSLLALNSLINA---FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
LK S+ NSLIN FG D E F + M L+P VVTYT+LM K +
Sbjct: 433 LKLSVYPYNSLINGHCKFG-DISAAEGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
K +Y EM G P L S L
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ + ++ KF AM F M+S IRPD + +I C+ RA+E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEK-WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
M+ G ++ YN++I+ + ++K W+ V + + + L P+ VT+ TLV
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG-IKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K F LE ++ + + F P+ ++L+ +RG ++A+N +++ G+ P+L
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+LI++ + R+ EA + M + L+P+ VTY+ L+ R K + EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 247 VSSG 250
V +G
Sbjct: 429 VDTG 432
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 35/289 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++ + YN +I+ KF + A M+++++ P VT+ +L+ +C G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A L+ EM KG +P + T+ +++ + L M + PN VT+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKP-------------------------------- 148
+++ Y + G + A E L+ + G P
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 149 ---TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
Y L++ + + G ++A++ ++M G+ L+ LI+ + + F
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+L+ M + L+PD V YT+++ A + F + +++ M++ GC P+
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
P + +++ K ++ A+ +R++ + P+ +N LID CK AE
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
LF M + G P +TY+I+I+ + K D L M GL + + +L++ +
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G + A + + + +PT Y +L+ Y +G ++A+ + +MT +G+ PS+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+L++ +A + M E +++P+ VTY +++ K +EM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 247 VSSGCTPD 254
G PD
Sbjct: 569 TEKGIVPD 576
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD Y MID K A ++ M++E P+ VT+ +I+ CKAG+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ AE L +MQ P +TY ++ + E Q + L +GLL N T+
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + GR +A E + + G P Y +IN +R +A+ + MT +G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 181 LKPSLLALNSLINA 194
++P +A N+LI+
Sbjct: 853 IRPDRVAYNTLIHG 866
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 124/322 (38%), Gaps = 70/322 (21%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI------------- 52
V+P+R YNVMI+ + + + A + M + I PDT ++ LI
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 53 ---------DCH-------------CKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSM 90
+C C+ G + A + QEM Q+G ++ Y ++I+
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 91 GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
+ LL M +GL P+ V +T+++D K+G F +A +++ + G P
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKM---------------------------------- 176
Y A+IN + G ++A KM
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 177 -TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+GL + N LI F R EA ++ M + + PD +TYTT++ L R +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 236 FHKVPAVYEEMVSSGCTPDRKA 257
K ++ M G PDR A
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVA 859
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 4/258 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV D Y V+ID K + M ++PD V + ++ID K G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ++ M +G P +TY +IN + ++ L ++MQ +PN VT+
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 121 LVDVYGKSGRFNDALECLEVLKSM--GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+D+ K D + +E+ ++ G YN LI + ++G ++A +M
Sbjct: 758 FLDILTKGEV--DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+G+ P + ++IN +A + M E ++PD V Y TL+ + K
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 239 VPAVYEEMVSSGCTPDRK 256
+ EM+ G P+ K
Sbjct: 876 ATELRNEMLRQGLIPNNK 893
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
LLP T + L+ K F A+E + S+G +P +Y +I + + +A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 171 NAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
M A G +++ N LI+ + ++ EA + + + DL+PDVVTY TL+ L
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
+V +F + +EM+ +P A + L LR
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ + YN++I F + ++ A RM+ + + PD +T+ T+I+ C+ +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
EL+ M +KG P + YN +I+ + + ++L M QGL+PN T T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIR----PDTVTWNTLIDCHCKAGYHDRAEELFQ 69
N+ +++ KF L+ A E +L + IR PD +T+NTLI + + D A + +
Sbjct: 17 NISVNSLCKFRNLERA----ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 70 EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
M++ G P V TYN +I+ ++V L M GL P+ ++ TL+ Y K G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 130 RFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
R +A + L E + G P YN L++A + G +D A+ F+ + + +KP L+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTY 191
Query: 189 NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
N LIN + RR +++ +K++ P+ VTYTT++K + + K ++ +M
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 249 SGCTPDRKARAMLRSAL 265
G T D A + SAL
Sbjct: 252 EGYTFDGFANCAVVSAL 268
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++PD YN +I K L+ + F+ ML + PD ++NTL+ C+ K G
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 61 HDRAEELFQE-MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
H A ++ E + G P + TYNI+++++ D +L ++S+ + P +T+
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ KS R + LK G+ P Y ++ Y + ++ + F KM E
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVL-QYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G A ++++A + R EA+ + + ++ D+V+Y TL+ +
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 239 VPAVYEEMVSSGCTPDRKARAMLRSAL 265
V + EE+ G PD ++ + L
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV PD YN +I + +F +D A A RM I PD T+N+LI K +R
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTR-MQSQGLLPNAVTFTTLVD 123
+LF EM G SP + +YN +++ + + +L + GL+P T+ L+D
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
KSG ++A+E + LKS KP YN LIN + R++ G P
Sbjct: 163 ALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ + +++ + + +R + + MK+ D ++ ALI+ + +
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 244 EEMVSSG 250
E+V SG
Sbjct: 282 HELVRSG 288
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 122/301 (40%), Gaps = 47/301 (15%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P YN+++D K D+A+ F+ L ++P+ +T+N LI+ CK+
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL------------ 112
+ + +E+++ GY+P +TY M+ ++ ++ L +M+ +G
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 113 ------------------------PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ V++ TL+++Y K G + + LE ++ G KP
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF---GEDRRDPEAF 205
+ ++N G + A + G++PS++ N LI+ G R F
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
A ++ E TYT+++ L + + + + G AR + S +
Sbjct: 388 ASMEVRDE-------FTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI 440
Query: 266 R 266
R
Sbjct: 441 R 441
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K +G P+ Y M+ + K ++ + F +M E D ++ K G
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 61 HDRAEELFQEMQQKGY-SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ A E E+ + G S +++YN ++N D V DLL ++ +GL P+ T T
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
+V+ G A + L + MG +P+ N LI+ + G D+A+ F M
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD +N + + F K LD ML + P+ VT++T ID CK+G A +
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
F M++ SP V+T+ +I+ + L M+ + N VT+T L+D +
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G A E + +P +Y +I+ + QRG SD A+ KM +G++ +
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
A +I+ + + EA +++ M+++DL PD+V +TT+M A + + +Y ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 247 VSSGCTPDRKA 257
+ G PD A
Sbjct: 365 IERGFEPDVVA 375
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + + P+ + +ID + K L+ A++ ++ M + + VT+ LID CK G
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RAEE++ M + P L Y +I+ + D L +M +QG+ + +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ +G+ +A E +E ++ P ++ ++NAY + G AVN + K+ G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P ++AL+++I+ ++ + EA K ND V YT L+ AL + F +V
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVE 423
Query: 241 AVYEEMVSSGCTPDR 255
++ ++ +G PD+
Sbjct: 424 RLFSKISEAGLVPDK 438
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y +ID F K + A + RM+ + + P+++ + T+ID + G D A + +M
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+G + Y ++I+ + K + ++++ M+ L+P+ V FTT+++ Y KSGR
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 133 DALECLEVLKSMGFKP------------------------------TPTMYNALINAYAQ 162
A+ L GF+P MY LI+A +
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
G + F K++ GL P S I + +AF + M + L D++
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
YTTL+ L + V++EM++SG +PD +L A
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S G P R +N ++ K + A M PD +++N+LID HC+ G
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 63 RAEELFQEMQ-QKGY--SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A + + ++ G+ P ++++N + N + D+V + M + PN VT++
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYS 167
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
T +D + KSG AL+ +K P + LI+ Y + G + AV+ +++M
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 180 GLKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+ +++ +LI+ F GE +R E ++ M E+ ++P+ + YTT++ +
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYS---RMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 237 HKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+M++ G D A ++ S L
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 36/262 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + V+P+ Y +ID F + D+AM +ML++ +R D + +I C G
Sbjct: 259 MVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLP------- 113
A E+ ++M++ P ++ + M+N+ + ++ ++ +G P
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 114 -----------------------NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
N V +T L+D K G F + + G P
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 151 TMYNALINAYAQRGLSDQAVNAFR---KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV 207
MY + I ++G V+AF+ +M EGL LLA +LI EA V
Sbjct: 439 FMYTSWIAGLCKQG---NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 208 LQYMKENDLQPDVVTYTTLMKA 229
M + + PD + L++A
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRA 517
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 5/177 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD + MID K L A+ F + + V + LID CK G
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEGDFIEV 422
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E LF ++ + G P Y I + Q L TRM +GLL + + +TTL+
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
G +A + + + + G P +++ LI AY + G A + M GL
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++ D Y V+I L A E M ++ PD V + T+++ + K+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 61 HDRAEELFQEMQQKGYSP-------------------------CV-----LTYNIMINSM 90
A ++ ++ ++G+ P C+ + Y ++I+++
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413
Query: 91 GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
+ + +V L +++ GL+P+ +T+ + K G DA + + G
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
Y LI A +GL +A F +M G+ P + LI A+
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 114/222 (51%)
Query: 33 FERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGA 92
F++M ++ + P T++ LID +CK ++A L +EM +KG+ PC Y +IN++G
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
++++ ++L ++ ++ + ++ +GK G+ ++A++ +K+ G P
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
YNAL++ + G+ ++A + RKM G + + + N ++N F A + + +K
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ ++PD VTY TL+ F + + EM G D
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 118/234 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK++ V P Y+++ID + K N ++ A+ E M + P + +LI+ KA
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ A ELF+E+++ + Y +MI G K + DL M++QG P+ +
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K+G N+A L ++ G + +N ++N +A+ G+ +A+ F + G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+KP + N+L+ F EA +++ MK+ + D +TY++++ A+ VD
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVD 633
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ G+ + A++ F + + +P + T+N++I + G H++ E++ EM +G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 76 YS-PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
P +TY+ +I+S + D L M+ + P +TTL+ +Y K G+ A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
L+ E +K G PT Y LI + G D+A ++ M +GL P ++ LN+L+N
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH--KVPAVYEEMVSSGCT 252
G+ R E V M P VV+Y T++KAL K H +V + +++M + +
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE-SKAHVSEVSSWFDKMKADSVS 406
Query: 253 PDRKARAML 261
P ++L
Sbjct: 407 PSEFTYSIL 415
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y+ +I ++ K D A+ F+ M ++P + TL+ + K G ++A +L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F+EM++ G SP V TY +I +G + D+ M GL P+ V L+++ GK
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 128 SGRFNDALECLEVLKSMG-FKPTPTM--YNALINA-YAQRGLSDQAVNAFRKMTAEGLKP 183
GR E V MG ++ TPT+ YN +I A + + + + F KM A+ + P
Sbjct: 351 VGRVE---ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
S + LI+ + + R +A +L+ M E P Y +L+ AL + ++ ++
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 244 EEM 246
+E+
Sbjct: 468 KEL 470
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 36/290 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTF-----------------------------------GKFNC 25
MK N +QP Y ++ + GK
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+D A ++ ML + + PD V N L++ K G + +F EM +P V++YN
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 86 MINSM-GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
+I ++ ++ +VS +M++ + P+ T++ L+D Y K+ R AL LE +
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
GF P P Y +LINA + + A F+++ S +I FG+ + EA
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ MK PDV Y LM +++ ++ ++ +M +GC D
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G+ PD F N +++ GK ++ F M P V++NT+I ++
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 61 H-DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
H F +M+ SP TY+I+I+ + ++ LL M +G P +
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L++ GK+ R+ A E + LK + +Y +I + + G +AV+ F +M +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G P + A N+L++ + EA ++L+ M+EN + D+ ++ ++ R +
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 240 PAVYEEMVSSGCTPD 254
++E + SG PD
Sbjct: 569 IEMFETIKHSGIKPD 583
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K N Y VMI FGK L A+ F M ++ PD +N L+ KAG
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A L ++M++ G + ++NI++N + ++ ++ G+ P+ VT+ T
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
L+ + +G F +A + +K GF+ Y+++++A V++F
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 105/194 (54%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++G+QP + Y +I + N A FE+++ + ++PD V NTL+D HC G
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
DRA L +EM +P +TYN ++ + + K+++ +L+ M+ +G+ P+ +++ T
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K G A + + S+GF PT YNAL+ ++ + A R+M +EG
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 181 LKPSLLALNSLINA 194
+ P+ + S+I A
Sbjct: 603 IVPNDSSFCSVIEA 616
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
MKS G QPD YN ++ + C + + R + E + PD+V++N LI G
Sbjct: 286 MKSKGFQPDMQTYNPILS----WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ A EM ++G P TYN +I+ + + K + L+ ++ +G++ ++VT+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L++ Y + G A + + + G +PT Y +LI ++ + +A F K+ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+KP L+ +N+L++ AF++L+ M + PD VTY LM+ L KF +
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 240 PAVYEEMVSSGCTPD 254
+ EM G PD
Sbjct: 522 RELMGEMKRRGIKPD 536
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 119/234 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ G+ D YN++I+ + + A A + M+++ I+P T+ +LI C+
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ELF+++ KG P ++ N +++ A D+ LL M + P+ VT+
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ G+F +A E + +K G KP YN LI+ Y+++G + A +M + G
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
P+LL N+L+ +++ A +L+ MK + P+ ++ ++++A+ +D
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P + YN +I N ++ A + + I D+VT+N LI+ +C+ G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A L EM G P TY +I + + K + +L ++ +G+ P+ V T
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + G + A L+ + M P YN L+ G ++A +M G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+KP ++ N+LI+ + + AF V M P ++TY L+K L + +
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 241 AVYEEMVSSGCTPD 254
+ EM S G P+
Sbjct: 593 ELLREMKSEGIVPN 606
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G P N ++ + N +++A + M EI+ + T+N +I+ CK G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A+ M+ G P ++TYN ++ + + + +++ M+S+G P+ T+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ GR A E L +K +G P YN LI + G + A +M +G
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+ N+LI+ + + A +++ ++E + D VTY L+ + K
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417
Query: 241 AVYEEMVSSGCTP 253
A+++EM++ G P
Sbjct: 418 ALHDEMMTDGIQP 430
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
T+ ++ L+ C C+ D A E F M++KG+ P T N ++ + + +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
M + N TF +++V K G+ A L +++ G KPT YN L+ ++ RG
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
+ A +M ++G +P + N +++ + R E VL+ MKE L PD V+Y
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYN 331
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
L++ A +EMV G P
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 3/243 (1%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
+++++ + +D A+ F M + P T T N ++ + + A + +M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ V T+NIMIN + + K + L M+ G+ P VT+ TLV + GR
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A + +KS GF+P YN +++ G +A R+M GL P ++ N L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNIL 333
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
I + AFA M + + P TY TL+ L +K + E+ G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 252 TPD 254
D
Sbjct: 394 VLD 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
+ + F LV + ++A+EC ++K GF P N ++ ++ + A +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
M +K ++ N +IN ++ + +A L M+ ++P +VTY TL++
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 234 DKFHKVPAVYEEMVSSGCTPD 254
+ + EM S G PD
Sbjct: 274 GRIEGARLIISEMKSKGFQPD 294
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 39/303 (12%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P + +N++I +C+D A F+ M + +P+ T+ L+ +CKAG D+
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EL M+ G P + YN +++S + + D ++ +M+ +GL+P+ VTF + +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 YGKSGRFNDA---LECLEVLKSMGF-KPTPTMYNALINAYAQRGLSDQAVNAF------- 173
K G+ DA +E+ + +G +P YN ++ + + GL + A F
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 174 ----------------------------RKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++MT +G+ PS+ + N L++ + +A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++ MK N + PD VTY L+ V K ++ +EM+ + C P+ +L +L
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 266 RYM 268
M
Sbjct: 442 WKM 444
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 23/277 (8%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NGV PD Y ++ + +D A + + M+ P+ T N L+ K G
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG---------- 110
AEEL ++M +KGY +T NI+++ + + D+ +++ M+ G
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 111 -------------LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
LP+ +T++TL++ K+GRF +A + +P YN I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
+ + ++G A + M +G SL NSLI G + E ++ MKE +
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
P++ TY T ++ L +K + +EM+ P+
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 4/263 (1%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P + YN+++++ K ++ ++ M+ I P T T+N LI C + D A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
LF EM +KG P T+ I++ D+ +LL M+S G+LPN V + T+V +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE---GL-K 182
+ GR +D+ + +E ++ G P +N+ I+A + G A F M + GL +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ + N ++ F + +A + + ++END + +Y ++ L+R KF + V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 243 YEEMVSSGCTPDRKARAMLRSAL 265
++M G P + +L L
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGL 371
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 23/277 (8%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P + YN+++D K L A M + PD VT+ L+ +C G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A+ L QEM + P T NI+++S+ + + +LL +M +G + VT
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFK-----------------------PTPTMYNALI 157
+VD SG + A+E ++ ++ G P Y+ L+
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
N + G +A N F +M E L+P +A N I+ F + + AF VL+ M++
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ TY +L+ L ++ ++ + +EM G +P+
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSE--EIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
++ F K N +D A F+ + S E +P +N L++ K + L+++M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G +P T+N++I ++ D +L M +G PN TF LV Y K+G +
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
LE L ++S G P +YN +++++ + G +D + KM EGL P ++ NS I+
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 194 AFGEDRRDPEAFAVLQYMKENDL----QPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
A ++ + +A + M+ ++ +P+ +TY ++K +V ++E +
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN+ + + A ++M + I P ++N L+D CK G A+ + M+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G P +TY +++ + K D LL M LPNA T L+ K GR +
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A E L + G+ N +++ G D+A+ + M G AL +L
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA----ALGNLG 504
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N++ V + EN+ PD++TY+TL+ L + +F + ++ EM+
Sbjct: 505 NSY--------IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 253 PDRKA 257
PD A
Sbjct: 557 PDSVA 561
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 4/254 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI----RPDTVTWNTLIDCHC 56
M+ G+ PD +N I K + A F M +E RP+++T+N ++ C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
K G + A+ LF+ +++ + +YNI + + K+ + +L +M +G+ P+
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++ L+D K G +DA + ++K G P Y L++ Y G D A + ++M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
P+ N L+++ + R EA +L+ M E D VT ++ L +
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 237 HKVPAVYEEMVSSG 250
K + + M G
Sbjct: 483 DKAIEIVKGMRVHG 496
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
N PD Y+ +++ K A F M+ E+++PD+V +N I CK G
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A + ++M++KG + TYN +I +G + + ++ L+ M+ +G+ PN T+ T +
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR-KMTAEGLK 182
+ + DA L+ + P + LI A+ + D A F ++ G K
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
L +L + N + +A +L+ + + + Y L+++L + D+ +
Sbjct: 698 EGLYSL--MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 243 YEEMVSSG 250
+M+ G
Sbjct: 756 LHKMIDRG 763
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 34 ERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQ 93
+ ++ PD +T++TL++ CKAG A+ LF EM + P + YNI I+ Q
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 94 EKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMY 153
K +L M+ +G + T+ +L+ G + + ++ +K G P Y
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 154 NALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
N I + + A N +M + + P++ + LI AF
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 13/213 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G YN +I G N + + M + I P+ T+NT I C+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-----QSQGLLPNA 115
+ A L EM QK +P V ++ +I + +D ++ Q +GL +
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY--S 702
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+ F L+ +G+ A E LE + GF+ +Y L+ + ++ + A K
Sbjct: 703 LMFNELL----AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 176 MTAEGLKPSLLALNSLINAFGE--DRRDPEAFA 206
M G AL +I+ G+ ++++ +FA
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEANSFA 791
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
+++D+ K + A+ ++ M + + D+V +N +I C +G A +M ++
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
G +P V TYN +I+++ + K+D+ DL MQ+ G+ P+ +++ ++ G N A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 135 LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
E L + P ++N +I+ Y + G + A++ M + G+KP++ N+LI+
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + R +A+ V M+ + PD TY L+ A + +Y+EM+ GC PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 2/269 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M V D YNV+I + A M+ + PD T+NTLI CK G
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +L MQ G +P ++Y ++I + ++ ++ L M LLP + +
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D YG+ G + AL L ++ S G KP NALI+ Y + G A +M +
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P N L+ A AF + M QPD++TYT L++ L + K
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMR 269
++ + ++G T D +L A +Y R
Sbjct: 531 SLLSRIQATGITIDHVPFLIL--AKKYTR 557
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 4/244 (1%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
LD A+ ++M+ + P +T N L++ CKAGY ++A+ L +EM++ G SP ++YN
Sbjct: 137 LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF-NDALECLEVLKSM 144
+I + + D+ L M G+ PN VT +V + G N+ + LE +
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 145 GFKPTP---TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
P + L+++ + G QA+ +++M+ + + + N +I
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
A+ + M + + PDV TY TL+ AL + KF + ++ M + G PD+ + ++
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 262 RSAL 265
L
Sbjct: 377 IQGL 380
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV PD YN +I K D A M + + PD +++ +I C G
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+RA E M + P VL +N++I+ G +L M S G+ PN T
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K GR DA ++S P T YN L+ A G A + +M G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P ++ L+ R +A ++L ++ + D V + L K R+ + +
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Query: 241 AVYEEMVSS 249
VY++ +++
Sbjct: 566 LVYKKWLAT 574
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 14/239 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +GV P +N +++ K ++ A M P+ V++NTLI C
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSM------GAQEKWDQVSDLLTRMQSQGLLPN 114
D+A LF M + G P +T NI+++++ G K + ++L Q+ L +
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK-KLLEEILDSSQANAPL-D 264
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP---TMYNALINAYAQRGLSDQAVN 171
V T L+D K+G + ++ LEV K M K P +YN +I G A
Sbjct: 265 IVICTILMDSCFKNG---NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
M G+ P + N+LI+A ++ + EA + M+ + PD ++Y +++ L
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 62 DRAEELFQEMQQK---GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
DR L + + Q Y C+ ++ ++ + Q K D L +M G++P +T
Sbjct: 100 DRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITH 159
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L++ K+G A + ++ MG P YN LI D+A+ F M
Sbjct: 160 NHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNK 219
Query: 179 EGLKPSLLALNSLINAFGE----DRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
G++P+ + N +++A + + + + + + D+V T LM + +
Sbjct: 220 YGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNG 279
Query: 235 KFHKVPAVYEEM 246
+ V++EM
Sbjct: 280 NVVQALEVWKEM 291
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 2/237 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+P+ N ID F + N L+ A+ ERM I P+ VT+N +I +C
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFT 119
+ A EL ++M KG P ++Y ++ + +++ +V DL+ +M + GL+P+ VT+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
TL+ + K ++AL L+ + GF+ Y+A+++A + G +A + +M ++
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 180 G-LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
G P ++ +++N F +A +LQ M + +P+ V+YT L+ + R K
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ ++ ++ ++ + L A+ M + P+ + NT ID +A
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A + MQ G P V+TYN MI + ++ +LL M S+G LP+ V++ T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 121 LVDVYGKSGRFNDALECLEVL-KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ K R + + ++ + K G P YN LI+ + +D+A+ + +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHK 238
G + L +++++A ++ R EA ++ M + PDVVTYT ++ R+ + K
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 239 VPAVYEEMVSSGCTPD 254
+ + M + G P+
Sbjct: 473 AKKLLQVMHTHGHKPN 488
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 36/288 (12%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K +G+ PD+ YN +I K + D A+ + + R D + ++ ++ CK G
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 62 DRAEELFQEMQQKGYSPC-VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A++L EM KG+ P V+TY ++N + D+ LL M + G PN V++T
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ ++G+ +A E + + + + P Y+ +++ + G +A + R+M +G
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 181 LKPSLLALNSLINAFGEDRRDPEA-----------------------------------F 205
P + +N L+ + D R EA
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAAL 614
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+VL M + DV TYTTL+ L + + + + ++M+ G P
Sbjct: 615 SVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y +++ F + +D A + M + +P+TV++ L++ C+ G A E+
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
++ +SP +TY+++++ + + K + D++ M +G P V L+ +
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
GR ++A + +E + G + +I+ + Q D A++ M +
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
+L++ G+ R EA +++ M + P VTY T++ ++ K + A+ E+M+
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 248 S 248
S
Sbjct: 692 S 692
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
+L M+ +G+ F+ ++ Y ++G+ DAL+ L +++ G +P + N I+ +
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 162 QRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVV 221
+ ++A+ +M G+ P+++ N +I + + R EA +L+ M PD V
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 222 TYTTLMKALIRVDKFHKVPAVYEEMVSS-GCTPDR 255
+Y T+M L + + +V + ++M G PD+
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
+ + + ++++V K+ + L ++K G TP ++ ++ +Y++ G A+
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
M G++P+LL N+ I+ F R +A L+ M+ + P+VVTY +++ +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 234 DKFHKVPAVYEEMVSSGCTPDR 255
+ + + E+M S GC PD+
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDK 347
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+ +I F + + LD A++ + M D T+ TL+D K G A EL ++M
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
KG P +TY +I+ K D + +L +M S+ + +++ G+
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ--KCRTIYNQVIEKLCVLGKLE 714
Query: 133 DALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+A L +VL++ T Y AL+ Y ++G+ A +M L P +
Sbjct: 715 EADTLLGKVLRTASRSDAKTCY-ALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 767
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ + N+++DT K ++ A ++ S I P+ T+N I CKA + A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
QEM+ G+ PCV++Y +I Q ++ +V ++L+ M++ G PN++T+TT++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR-KMTAEGLKP 183
F +AL +K G KP YN LI+ A+ G ++A FR +M G+
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDL-QPDVVTYTTLMKALIRVDKFHKVPAV 242
+ NS+I + + +A +L+ M+ ++L PDV TY L+++ + +V +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 243 YEEMVS 248
+EMV+
Sbjct: 424 LKEMVT 429
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ H +N+ I + K N ++ A+ T + M RP +++ T+I C+C+ +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E+ EM+ G P +TY +++S+ AQ+++++ + TRM+ G P+++ + L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 126 GKSGRFNDALECLEV-LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL-KP 183
++GR +A V + +G + YN++I Y D+A+ ++M + L P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+ L+ + + E +L+ M ++ L D TYT L++ L R + +
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 243 YEEMVSSGCTPDRKARAML 261
+EEM+S TP + +L
Sbjct: 460 FEEMISQDITPRHRTCLLL 478
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 52 IDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGL 111
+D KA DR +E + M+ IM GA E W++ + R+ GL
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGE-WEEAVGIFDRLGEFGL 186
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN 171
N + L+D K R A L LKS P +N I+ + + ++A+
Sbjct: 187 EKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALW 245
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
++M G +P +++ ++I + + + + +L M+ N P+ +TYTT+M +L
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305
Query: 232 RVDKFHKVPAVYEEMVSSGCTPD 254
+F + V M SGC PD
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPD 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV---YGKSGR 130
KG+ Y++ ++ +G +KWD++ + + RM+ L VT T+ + + +G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL----VTLNTVAKIMRRFAGAGE 170
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
+ +A+ + L G + N L++ + +QA ++ + + P+ N
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNI 229
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
I+ + + R EA +Q MK + +P V++YTT+++ + +F KV + EM ++G
Sbjct: 230 FIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 251 CTPDRKARAMLRSALRYMRQ 270
P+ + S+L ++
Sbjct: 290 SPPNSITYTTIMSSLNAQKE 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++NG P+ Y ++ + + A+ RM +PD++ +N LI +AG
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 HDRAEELFQ-EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTF 118
+ AE +F+ EM + G S TYN MI ++ D+ +LL M+S L P+ T+
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM----YNALINAYAQRGLSDQAVNAFR 174
L+ K G D +E ++LK M K ++ Y LI + + + A F
Sbjct: 405 QPLLRSCFKRG---DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 175 KMTAEGLKP 183
+M ++ + P
Sbjct: 462 EMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ + N+++DT K ++ A ++ S I P+ T+N I CKA + A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
QEM+ G+ PCV++Y +I Q ++ +V ++L+ M++ G PN++T+TT++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR-KMTAEGLKP 183
F +AL +K G KP YN LI+ A+ G ++A FR +M G+
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDL-QPDVVTYTTLMKALIRVDKFHKVPAV 242
+ NS+I + + +A +L+ M+ ++L PDV TY L+++ + +V +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 243 YEEMVS 248
+EMV+
Sbjct: 424 LKEMVT 429
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ H +N+ I + K N ++ A+ T + M RP +++ T+I C+C+ +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E+ EM+ G P +TY +++S+ AQ+++++ + TRM+ G P+++ + L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 126 GKSGRFNDALECLEV-LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL-KP 183
++GR +A V + +G + YN++I Y D+A+ ++M + L P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+ L+ + + E +L+ M ++ L D TYT L++ L R + +
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 243 YEEMVSSGCTPDRKARAML 261
+EEM+S TP + +L
Sbjct: 460 FEEMISQDITPRHRTCLLL 478
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 52 IDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGL 111
+D KA DR +E + M+ IM GA E W++ + R+ GL
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGE-WEEAVGIFDRLGEFGL 186
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVN 171
N + L+D K R A L LKS P +N I+ + + ++A+
Sbjct: 187 EKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALW 245
Query: 172 AFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
++M G +P +++ ++I + + + + +L M+ N P+ +TYTT+M +L
Sbjct: 246 TIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLN 305
Query: 232 RVDKFHKVPAVYEEMVSSGCTPD 254
+F + V M SGC PD
Sbjct: 306 AQKEFEEALRVATRMKRSGCKPD 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV---YGKSGR 130
KG+ Y++ ++ +G +KWD++ + + RM+ L VT T+ + + +G
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL----VTLNTVAKIMRRFAGAGE 170
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
+ +A+ + L G + N L++ + +QA ++ + + P+ N
Sbjct: 171 WEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNI 229
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
I+ + + R EA +Q MK + +P V++YTT+++ + +F KV + EM ++G
Sbjct: 230 FIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 251 CTPDRKARAMLRSALRYMRQ 270
P+ + S+L ++
Sbjct: 290 SPPNSITYTTIMSSLNAQKE 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++NG P+ Y ++ + + A+ RM +PD++ +N LI +AG
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 HDRAEELFQ-EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTF 118
+ AE +F+ EM + G S TYN MI ++ D+ +LL M+S L P+ T+
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM----YNALINAYAQRGLSDQAVNAFR 174
L+ K G D +E ++LK M K ++ Y LI + + + A F
Sbjct: 405 QPLLRSCFKRG---DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 175 KMTAEGLKP 183
+M ++ + P
Sbjct: 462 EMISQDITP 470
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+ + Y +I + ++ AM +E+ML PD + LI C+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +++++ G+S +L YN++I + ++V ++LT M+ +G P+++T+ T
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +GK F +E ++ G PT T Y A+I+AY G D+A+ F+ M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 181 -LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P+ + N LINAF + +A ++ + MK ++P+V TY L K L + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706
Query: 240 PAVYEEMV 247
+ +EMV
Sbjct: 707 LKLMDEMV 714
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERM-LSEEIRPDTVTWNTLIDCHCKAGYHD 62
N ++ D +N +ID K L A RM L E P+ VT+N LID +C+AG +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+E+ M++ P V+T N ++ M + M+ +G+ N VT+ TL+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
A+ E + G P +Y ALI+ Q A+ K+ G
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
LLA N LI F + + + +L M++ +PD +TY TL+ + F V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 243 YEEMVSSGCTP 253
E+M G P
Sbjct: 604 MEQMREDGLDP 614
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN +ID + + L+ A RM +EI+P+ VT NT++ C+ + A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F +M+++G V+TY +I++ + ++ +M G P+A + L+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
R +DA+ +E LK GF YN LI + + +++ M EG KP +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+LI+ FG+ + +++ M+E+ L P V TY ++ A V + + ++++M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE------IRPDTVTWNTLIDCHCKAG 59
++PD ++I+T K +D A+ FE+M + I+ D++ +NTLID CK G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 YHDRAEELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
AEEL M+ ++ P +TYN +I+ K + ++++RM+ + PN VT
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T+V + N A+ ++ G K Y LI+A ++A+ + KM
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G P +LI+ + RRD +A V++ +KE D++ Y L+ + K
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 239 VPAVYEEMVSSGCTPD 254
V + +M G PD
Sbjct: 565 VYEMLTDMEKEGKKPD 580
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S+GV P+ + I + K + A ++ + + +N L+ C +
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG------LLPNAV 116
R +L +M + P V+T I+IN++ + D+ ++ +M+ + + +++
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
F TL+D K GR +A E L +K P YN LI+ Y + G + A +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M + +KP+++ +N+++ A M++ ++ +VVTY TL+ A V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
K YE+M+ +GC+PD K L S L +R+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ G+ + +M +IRPD VT LI+ CK+ D A E+F++M+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 73 QKG------YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ-SQGLLPNAVTFTTLVDVY 125
K + +N +I+ + + + +LL RM+ + +PNAVT+ L+D Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
++G+ A E + +K KP N ++ + + AV F M EG+K ++
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ +LI+A +A + M E PD Y L+ L +V + H V E+
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 246 MVSSGCTPDRKARAML 261
+ G + D A ML
Sbjct: 537 LKEGGFSLDLLAYNML 552
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y +I + A+ E++ D + +N LI C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ E+ +M+++G P +TYN +I+ G + ++ V ++ +M+ GL P T+
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF----KPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++D Y G ++AL+ + K MG P +YN LINA+++ G QA++ +M
Sbjct: 622 VIDAYCSVGELDEALK---LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+ ++P++ N+L E + ++ M E+
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEH 716
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 48/286 (16%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
++I FG+ ++ ++ +ER+ S ++ N ++D + G D A ++ EM QK
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 75 G--YSPCVLTYNIMINSMGAQE--KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
+ P +T +I+++ + + +++ L++R S G+ PN+V T + K+ R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 131 ----------------------FNDALECLE-----------VLK--SMGFKPTPTMYNA 155
FN L CL VLK + +P
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 156 LINAYAQRGLSDQAVNAFRKM----TAEG--LKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
LIN + D+A+ F +M T +G +K + N+LI+ + R EA +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 210 YMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
MK E P+ VTY L+ R K V M P+
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV PD + + I+ F K ++ A+ F +M + P+ VT+NT+ID G +D A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++M ++G P ++TY+I++ + ++ +L M +G PN + + L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ ++G N A+E +++ S G T + YN LI Y + G +D A ++M + G +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ S+I A + M ++ P TTL+ L + K K ++
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 245 EMVSSGCTPD-RKARAML 261
+ ++ G D R + A+L
Sbjct: 495 QFLNKGFVVDTRTSNALL 512
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G DR YN +I LD A + M+ ++PD T++ LI C ++
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKV 591
Query: 65 EELFQ---EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
EE Q + ++ G P V TY++MI+ E+ ++ + M S+ + PN V + L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ Y +SGR + ALE E +K G P Y +LI + ++A F +M EGL
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+P++ +LI+ +G+ + + +L+ M ++ P+ +TYT ++ R +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 242 VYEEMVSSGCTPD 254
+ EM G PD
Sbjct: 772 LLNEMREKGIVPD 784
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K NG+ PD + Y+VMID K + F+ M+S+ ++P+TV +N LI +C++G
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A EL ++M+ KG SP TY +I M + ++ L M+ +GL PN +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D YGK G+ L + S P Y +I YA+ G +A +M +G+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 KPSLLALNSLINAFGEDRRDPEAF 205
P + I + + EAF
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAF 805
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + Y+++I N ++ A+ ++ + PD T++ +ID CKA
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +E F EM K P + YN +I + + +L M+ +G+ PN+ T+T+
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ R +A E ++ G +P Y ALI+ Y + G + R+M ++
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+ P+ + +I + D EA +L M+E + PD +TY + ++
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P+ YN +ID+F + L+ A+ + M+S+ + + T+NTLI +CK G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AE L +EM G++ ++ +I + + +D + M + + P TT
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G+ + ALE + GF NAL++ + G D+A +++ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ N+LI+ ++ EAF L M + L+PD TY+ L+ L ++K +
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 241 AVYEEMVSSGCTPD 254
+++ +G PD
Sbjct: 596 QFWDDCKRNGMLPD 609
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+ G D N ++ + LD A + +L D V++NTLI C D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A EM ++G P TY+I+I + K ++ + G+LP+ T++ ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D K+ R + E + + S +P +YN LI AY + G A+ M +G+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ SLI R EA + + M+ L+P+V YT L+ ++ + KV +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 243 YEEMVSSGCTPDR 255
EM S P++
Sbjct: 738 LREMHSKNVHPNK 750
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+ F + ++ + P T N L+ +A + E F ++ KG SP V + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ K ++ L ++M+ G+ PN VTF T++D G GR+++A E + G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
T Y+ L+ + A ++MT +G P+++ N+LI++F E +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK----------AR 258
M L TY TL+K + + + +EM+S G ++ +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 259 AMLRSALRYMRQTL 272
M SALR++ + L
Sbjct: 449 LMFDSALRFVGEML 462
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV P+ +N +ID G D A E+M+ + P +T++ L+ +A
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVT 117
A + +EM +KG+ P V+ YN +I+S G+ K ++ DL M S+GL + T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL---MVSKGLSLTSST 402
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ TL+ Y K+G+ ++A L+ + S+GF + ++I + D A+ +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+ P L +LI+ + + +A + D T L+ L K
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSA 264
+ + +E++ GC DR + L S
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISG 549
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P +I K A+ + + L++ DT T N L+ C+AG D A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ +E+ +G ++YN +I+ ++K D+ L M +GL P+ T++ L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ +A++ + K G P Y+ +I+ + +++ F +M ++ ++P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ N LI A+ R A + + MK + P+ TYT+L+K + + + + ++EE
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 246 MVSSGCTPD 254
M G P+
Sbjct: 706 MRMEGLEPN 714
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ P+ Y +I + ++ A FE M E + P+ + LID + K G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E L +EM K P +TY +MI + S LL M+ +G++P+++T+
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LVDVYGKSGRFNDALE 136
+ Y K G +A +
Sbjct: 791 FIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV PD + + I+ F K ++ A+ F +M + P+ VT+NT+ID G +D A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++M ++G P ++TY+I++ + ++ +L M +G PN + + L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ ++G N A+E +++ S G T + YN LI Y + G +D A ++M + G +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ S+I A + M ++ P TTL+ L + K K ++
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 245 EMVSSGCTPD-RKARAML 261
+ ++ G D R + A+L
Sbjct: 495 QFLNKGFVVDTRTSNALL 512
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G DR YN +I LD A + M+ ++PD T++ LI C ++
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKV 591
Query: 65 EELFQ---EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
EE Q + ++ G P V TY++MI+ E+ ++ + M S+ + PN V + L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ Y +SGR + ALE E +K G P Y +LI + ++A F +M EGL
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+P++ +LI+ +G+ + + +L+ M ++ P+ +TYT ++ R +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 242 VYEEMVSSGCTPD 254
+ EM G PD
Sbjct: 772 LLNEMREKGIVPD 784
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K NG+ PD + Y+VMID K + F+ M+S+ ++P+TV +N LI +C++G
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A EL ++M+ KG SP TY +I M + ++ L M+ +GL PN +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D YGK G+ L + S P Y +I YA+ G +A +M +G+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 KPSLLALNSLINAFGEDRRDPEAF 205
P + I + + EAF
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAF 805
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + Y+++I N ++ A+ ++ + PD T++ +ID CKA
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +E F EM K P + YN +I + + +L M+ +G+ PN+ T+T+
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ R +A E ++ G +P Y ALI+ Y + G + R+M ++
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
+ P+ + +I + D EA +L M+E + PD +TY + ++
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P+ YN +ID+F + L+ A+ + M+S+ + + T+NTLI +CK G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AE L +EM G++ ++ +I + + +D + M + + P TT
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G+ + ALE + GF NAL++ + G D+A +++ G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ N+LI+ ++ EAF L M + L+PD TY+ L+ L ++K +
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 241 AVYEEMVSSGCTPD 254
+++ +G PD
Sbjct: 596 QFWDDCKRNGMLPD 609
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+ G D N ++ + LD A + +L D V++NTLI C D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A EM ++G P TY+I+I + K ++ + G+LP+ T++ ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D K+ R + E + + S +P +YN LI AY + G A+ M +G+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ SLI R EA + + M+ L+P+V YT L+ ++ + KV +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 243 YEEMVSSGCTPDR 255
EM S P++
Sbjct: 738 LREMHSKNVHPNK 750
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A+ F + ++ + P T N L+ +A + E F ++ KG SP V + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ K ++ L ++M+ G+ PN VTF T++D G GR+++A E + G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
T Y+ L+ + A ++MT +G P+++ N+LI++F E +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK----------AR 258
M L TY TL+K + + + +EM+S G ++ +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 259 AMLRSALRYMRQTL 272
M SALR++ + L
Sbjct: 449 LMFDSALRFVGEML 462
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV P+ +N +ID G D A E+M+ + P +T++ L+ +A
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVT 117
A + +EM +KG+ P V+ YN +I+S G+ K ++ DL M S+GL + T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL---MVSKGLSLTSST 402
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ TL+ Y K+G+ ++A L+ + S+GF + ++I + D A+ +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+ P L +LI+ + + +A + D T L+ L K
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSA 264
+ + +E++ GC DR + L S
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISG 549
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P +I K A+ + + L++ DT T N L+ C+AG D A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ +E+ +G ++YN +I+ ++K D+ L M +GL P+ T++ L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ +A++ + K G P Y+ +I+ + +++ F +M ++ ++P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ N LI A+ R A + + MK + P+ TYT+L+K + + + + ++EE
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 246 MVSSGCTPD 254
M G P+
Sbjct: 706 MRMEGLEPN 714
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ P+ Y +I + ++ A FE M E + P+ + LID + K G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E L +EM K P +TY +MI + S LL M+ +G++P+++T+
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LVDVYGKSGRFNDALE 136
+ Y K G +A +
Sbjct: 791 FIYGYLKQGGVLEAFK 806
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G P N + + +D A+ + M +I P+ T N ++ +C++G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+ EL Q+M++ G+ ++YN +I + L M GL PN VTF T
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + ++ + +A + +K++ P YN LIN Y+Q+G + A + M G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ +L N+LI + + +A ++ + + +L P+ T++ L+ +
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+Y+ M+ SGC P+ + ML SA
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A + F +M+ G+ P V + N ++S+ Q + D M+ + PN T ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y +SG+ + +E L+ ++ +GF+ T YN LI + ++GL A+ M GL+P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ N+LI+ F + EA V MK ++ P+ VTY TL+ + Y
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 244 EEMVSSGCTPD 254
E+MV +G D
Sbjct: 367 EDMVCNGIQRD 377
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + P+ + N+++ + + LD + + M R V++NTLI HC+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L M + G P V+T+N +I+ K + S + M++ + PN VT+ T
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y + G A E + G + YNALI ++ + +A +++ E
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+ ++LI + F + + M + P+ T+ L+ A R + F
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRY 267
V EMV D + + + L++
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKH 495
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN +I + L A+ M ++P+ VT+NTLI C+A A ++F EM+
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+P +TYN +IN Q + M G+ + +T+ L+ K +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A + ++ L P + ++ALI R +D+ ++ M G P+ N L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+AF + A VL+ M + D T + L K V + +EM
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G P N + + +D A+ + M +I P+ T N ++ +C++G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+ EL Q+M++ G+ ++YN +I + L M GL PN VTF T
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + ++ + +A + +K++ P YN LIN Y+Q+G + A + M G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ +L N+LI + + +A ++ + + +L P+ T++ L+ +
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+Y+ M+ SGC P+ + ML SA
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A + F +M+ G+ P V + N ++S+ Q + D M+ + PN T ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y +SG+ + +E L+ ++ +GF+ T YN LI + ++GL A+ M GL+P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ N+LI+ F + EA V MK ++ P+ VTY TL+ + Y
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 244 EEMVSSGCTPD 254
E+MV +G D
Sbjct: 367 EDMVCNGIQRD 377
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ + P+ + N+++ + + LD + + M R V++NTLI HC+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L M + G P V+T+N +I+ K + S + M++ + PN VT+ T
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ Y + G A E + G + YNALI ++ + +A +++ E
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L P+ ++LI + F + + M + P+ T+ L+ A R + F
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRY 267
V EMV D + + + L++
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKH 495
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN +I + L A+ M ++P+ VT+NTLI C+A A ++F EM+
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+P +TYN +IN Q + M G+ + +T+ L+ K +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A + ++ L P + ++ALI R +D+ ++ M G P+ N L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+AF + A VL+ M + D T + L K V + +EM
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLS-EEIRPDTVTWNTLIDCHCKAG 59
M S G++P Y +I +GK LD A +T E M S + +PD T+ LI C CK G
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL---------------- 103
D + + EM G +TYN +I+ G ++++ +L
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 104 --------------------TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS 143
+R Q G+ P+ TF L+ +GK+G + ++ ++
Sbjct: 290 NSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK 349
Query: 144 MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
F T YN +I + + G ++ + FRKM +G+KP+ + SL+NA+ + +
Sbjct: 350 RFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVK 409
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+VL+ + +D+ D + ++ A + + +Y +M C PD+
Sbjct: 410 IDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDK 461
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+Q Y P TY + +G ++ DQ S L M S+GL P +T+L+ VYGKS
Sbjct: 136 KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELL 195
Query: 132 NDALECLEVLKSMG-FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
+ A LE +KS+ KP + LI+ + G D + +M+ G+ S + N+
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNT 255
Query: 191 LINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
+I+ +G+ E +VL M E+ D PDV T +++ + K+ + Y
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM 315
Query: 250 GCTPD 254
G PD
Sbjct: 316 GVQPD 320
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GVQPD +N++I +FGK + + M TVT+N +I+ KAG ++
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+++F++M+ +G P +TY ++N+ ++ +L ++ + ++ + F +++
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINA 435
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
YG++G E ++ KP + +I Y G+ D ++M + +
Sbjct: 436 YGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKF------NCLDHAMATFERMLSEEIRPDTVTWNTLIDC 54
+ S G +PD Y I+T + L H + F S +R +N L+
Sbjct: 7 IHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVR----LYNALVSR 62
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
+ + + + + EM+++ + Y +I W + ++ ++ GL +
Sbjct: 63 YLRK---EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMD 119
Query: 115 AVTFTTLVDVYGKSGR---------FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
+ +++D +GK G F D E + LKS G P+ ++ L NAYAQ+GL
Sbjct: 120 VEIYNSVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGL 179
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND-LQPDVVTYT 224
Q V + M EG++P+L+ LN LINAFG + EA ++ ++KE + PDVVTY+
Sbjct: 180 CKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYS 239
Query: 225 TLMKALIRVDKFHKV 239
TLMKA R K+ V
Sbjct: 240 TLMKAFTRAKKYEMV 254
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 121/244 (49%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+ G +P+ ++ K N L A+ E M+S I PD + L++ CK G
Sbjct: 99 TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A +L ++M+ GY +TYN ++ + +Q + R+ +GL PNA T++ L+
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ K ++A++ L+ + G +P YN L+ + + G +D A+ FR++ A+G K
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
++++ N L+ D R EA ++L M D P VVTY L+ +L + + V
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 243 YEEM 246
+EM
Sbjct: 339 LKEM 342
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S+G+ PD Y +++ K + +AM E+M +TVT+N L+ C G
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+++ + + + QKG +P TY+ ++ + + D+ LL + +G PN V++
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + K GR +DA+ L + GFK YN L+ G ++A + +M
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV--VTYTTLMKALIRVDKFHK 238
PS++ N LIN+ R +A VL+ M + + Q V +Y ++ L + K
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 239 VPAVYEEMVSSGCTPD 254
V +EM+ C P+
Sbjct: 372 VVKCLDEMIYRRCKPN 387
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +P+ YNV++ F K D AMA F + ++ + + V++N L+ C C G + A
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG---LLPNAVTFTTL 121
L EM +P V+TYNI+INS+ + +Q +L M S+G A ++ +
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPV 359
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL------------------------- 156
+ K G+ + ++CL+ + KP YNA+
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Query: 157 ----------INAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
I + ++G + A +MT G P ++LI + A
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479
Query: 207 VLQYMKEND-LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
VL M+E++ +P V + ++ L ++ + V+E MV P+ A+L +
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 266 RY 267
+
Sbjct: 540 AH 541
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
L + + E +++ +P+ L+ CKA +A + + M G P Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++N + + L+ +M+ G N VT+ LV G N +L+ +E L G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 146 FKPTPTMYNALINA-YAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
P Y+ L+ A Y +RG +D+AV ++ +G +P+L++ N L+ F ++ R +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERG-TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
A+ + + + +VV+Y L++ L ++ + ++ EM P +L ++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 265 LRYMRQT 271
L + +T
Sbjct: 326 LAFHGRT 332
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ D Y V++D K L A TF+ +L + P+ VT+ L+D CKAG
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE + +M +K P V+TY+ MIN + ++ LL +M+ Q ++PN T+ T
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D K+G+ A+E + ++ +G + + +AL+N + G + + M ++G
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + SLI+ F + + A A + M+E + DVV+Y L+ ++ KF KV
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML---KFGKVG 556
Query: 241 A--VYEEMVSSGCTPD 254
A Y+ M G PD
Sbjct: 557 ADWAYKGMREKGIEPD 572
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMAT--FERMLSEEIRPDTVTWNTLIDCHCKA 58
M + GV PD +N +I F N L H + + +M++ + PD N LI CK
Sbjct: 84 MCTFGVVPDSRLWNSLIHQF-NVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKV 142
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G A L ++ + S +TYN +I+ + D+ L+ M G+LP+ V++
Sbjct: 143 GRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
TL+D + K G F A ++ + + + ++ N +A A+R M
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE-------EAYRDMVM 252
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G P ++ +S+IN + + E +L+ M+E + P+ VTYTTL+ +L + + +
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 239 VPAVYEEMVSSGCTPDRKARAMLRSAL 265
A+Y +MV G D +L L
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGL 339
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ D YNV+I KF + A ++ M + I PD T+N +++ K G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +L+ +M+ G P +++ NI++ + K ++ +L +M + PN T+
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+D K R + + E L S G K + +YN LI + G++ +A M A G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P + NSL++ + +A + M E + P+V TY T+++ L +V
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 241 AVYEEMVSSGCTPD 254
EM S G PD
Sbjct: 769 KWLSEMKSRGMRPD 782
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P+ Y + +DT K D T E +LS I+ +NTLI CK G +A
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ +M+ +G+ P +T+N +++ + + M G+ PN T+ T++
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+G + + L +KS G +P YNALI+ A+ G ++ + +M A+GL P
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT 818
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
N LI+ F + +A +L+ M + + P+ TY T++ L ++
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 111/232 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ V P+ Y ++D+ K N HA+A + +M+ I D V + L+D KAG
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE+ F+ + + P V+TY +++ + ++T+M + ++PN VT+++
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ Y K G +A+ L ++ P Y +I+ + G + A+ ++M G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
++ + L++L+N R E +++ M + D + YT+L+ +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 28/282 (9%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+++ + D YN +I + D A M+ I PDTV++NTLID CK G
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211
Query: 61 HDRA----------------------------EELFQEMQQKGYSPCVLTYNIMINSMGA 92
RA EE +++M G+ P V+T++ +IN +
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271
Query: 93 QEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM 152
K + LL M+ + PN VT+TTLVD K+ + AL + G +
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y L++ + G +A F+ + + P+++ +L++ + A ++ M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 213 ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
E + P+VVTY++++ ++ + ++ +M P+
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 122/274 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++PD +N+M+++ K + + +++M S I+P ++ N ++ C+ G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + +M P + TY I +++ ++ D + + S G+ + + T
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G A + +++ GF P +N+L++ Y +A++ + M G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++ N++I + E L MK ++PD TY L+ ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+Y EM++ G P +L S + + L++
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQA 837
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS G++P N+++ + ++ A+ +M+ EI P+ T+ +D K
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK--- 655
Query: 61 HDRAEELF---QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
H RA+ +F + + G YN +I ++ + + ++ M+++G +P+ VT
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F +L+ Y AL V+ G P YN +I + GL + +M
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+ G++P N+LI+ + + + M + L P TY L+ V K
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ + +EM G +P+ + S L
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGL 863
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 117/255 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G PD ++ +I+ K + M + P+ VT+ TL+D KA
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A L+ +M +G ++ Y ++++ + + + +PN VT+T
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVD K+G + A + + P Y+++IN Y ++G+ ++AV+ RKM +
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+ ++I+ + ++ A + + M+ ++ + L+ L R+ + +V
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Query: 241 AVYEEMVSSGCTPDR 255
+ ++MVS G T D+
Sbjct: 490 GLVKDMVSKGVTLDQ 504
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 36/301 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ +G + D F+N +I+ F + ++ A+ +M + P T T+NTLI + AG
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 61 HDRAEELFQEMQQKG---YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+R+ EL M ++G P + T+N+++ + ++K ++ +++ +M+ G+ P+ VT
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGF----KPTPTMYNALINAYAQRGLSDQAVNAF 173
+ T+ Y + G A EV++ M KP ++ Y + G +
Sbjct: 226 YNTIATCYVQKGETVRAES--EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 174 RKMTAEGLKPSLLALNSLINAFGE--DRRDPEAFA-----------------------VL 208
R+M ++ +L+ NSLIN F E DR + VL
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVL 343
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYM 268
MKE +++ DV+TY+T+M A K V++EMV +G PD A ++L A Y+
Sbjct: 344 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL--AKGYV 401
Query: 269 R 269
R
Sbjct: 402 R 402
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+R T N LI+ G A+ +F+ + + G+ P +++Y ++ +M Q+++ +S
Sbjct: 45 VRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS 100
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+++ ++ G +++ F +++ + +SG DA++ L +K +G PT + YN LI Y
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 161 AQRGLSDQAVNAFRKMTAEG---LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
G +++ M EG + P++ N L+ A+ + ++ EA+ V++ M+E ++
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 218 PDVVTYTTLMKALIRVDKFHKVPA---VYEEMV 247
PD VTY T+ A V K V A V E+MV
Sbjct: 221 PDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 28/296 (9%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V P+ +NV++ + K ++ A ++M +RPDTVT+NT+ C+ + G RAE
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 -ELFQEMQQKGYS-PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL-- 121
E+ ++M K + P T I++ + + + RM+ + N V F +L
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 122 --VDVYGKSG-----------RFNDALE----------CLEVLKSMGFKPTPTMYNALIN 158
V+V + G FN+ +E L ++K K Y+ ++N
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
A++ G ++A F++M G+KP A + L + + +A +L+ + +P
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RP 422
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+VV +TT++ V+ +M G +P+ K L ++Q K+
Sbjct: 423 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 478
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V+ D Y+ +++ + ++ A F+ M+ ++PD ++ L + +A
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+AEEL + + + P V+ + +I+ + D + +M G+ PN TF T
Sbjct: 406 PKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQ---AVNAFR 174
L+ Y + + A E L++++ G KP + + L A+ GL+D+ A+NA +
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
++ D +T++T+++ AGY ++A ++F+EM + G P Y+I+ ++ +
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+LL + + PN V FTT++ + +G +DA+ + G P + L+ Y
Sbjct: 411 ELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 161 AQRGLSDQAVNAFRKMTAEGLKP 183
+ +A + M G+KP
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGVKP 492
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
V+TY+ ++N+ + ++ + + M G+ P+A ++ L Y ++ A E LE
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 414
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
L + +P ++ +I+ + G D A+ F KM G+ P++ +L+ + E +
Sbjct: 415 TL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVK 473
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+ +A VLQ M+ ++P+ T+ L +A
Sbjct: 474 QPWKAEEVLQMMRGCGVKPENSTFLLLAEA 503
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 36 MLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK 95
M++ + PD VT + + C+ G D A++L +E+ +K P TYN ++ + +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 96 WDQVSDLLTRMQSQ-GLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
V + + M+ + P+ V+FT L+D S +A+ + L + GFKP +YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
++ + +AV ++KM EG++P + N+LI + R EA L+ M +
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+PD TYT+LM + R + ++ EEM + GC P+
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 130/266 (48%), Gaps = 5/266 (1%)
Query: 8 PDRHFYNVMIDTFGKFNCLD-HAMATFERMLSEE--IRPDTVTWNTLIDCHCKAGYHDRA 64
PD + YN ++ K C D H + F + ++ ++PD V++ LID C + A
Sbjct: 192 PDTYTYNFLLKHLCK--CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L ++ G+ P YN ++ K + + +M+ +G+ P+ +T+ TL+
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K+GR +A L+ + G++P Y +L+N ++G S A++ +M A G P+
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
N+L++ + R + + + MK + ++ + Y TL+++L++ K + V++
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Query: 245 EMVSSGCTPDRKARAMLRSALRYMRQ 270
V S D A + L + L+++++
Sbjct: 430 YAVDSKSLSDASAYSTLETTLKWLKK 455
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V+PD + ++ID L AM ++ + +PD +NT++ C A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++++M+++G P +TYN +I + + ++ L M G P+ T+T+L++
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ G AL LE +++ G P YN L++ + L D+ + + M + G+K
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+L+ + + + EA+ V Y ++ D Y+TL L
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD YN ++ F + A+ +++M E + PD +T+NTLI KAG + A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ M GY P TY ++N M + + LL M+++G PN T+ TL+
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
K+ + +E E++KS G K Y L+ + + G +A F
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK GV+PD+ YN +I K ++ A + M+ PDT T+ +L++ C+ G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L +EM+ +G +P TYN +++ + D+ +L M+S G+ + + T
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 121 LVDVYGKSGRFNDALECLE 139
LV KSG+ +A E +
Sbjct: 411 LVRSLVKSGKVAEAYEVFD 429
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 98/284 (34%), Gaps = 71/284 (25%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEE--IRPDTVTWNTLIDCHCKAGYHDRAEE 66
D F+N ++ ++G ++ + F+ +L + RP T+ L+ C+A
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRA-------- 135
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
V +L M + GL P+ VT V
Sbjct: 136 -------------------------PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ------------------------ 162
++GR ++A + ++ L P YN L+ +
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 163 ---RGLSDQAVNA---------FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQY 210
L D N+ K+ G KP N+++ F + EA V +
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 211 MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
MKE ++PD +TY TL+ L + + + + MV +G PD
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 130/251 (51%), Gaps = 8/251 (3%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAGYHDR 63
GV + +NV+++ + L+ A+ ERM+SE ++ PD VT+NT++ K G
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+EL +M++ G P +TYN ++ +G+ ++ Q+ +L M+ +LP+ T+
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL---MKQTNVLPDLCTYNI 315
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ +G + LE ++ +KS+ +P YN LI+ + GLS +A +M +G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 181 LKPSLLALN-SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+K + + N SL E++R+ V + + + PD+VTY TL+KA ++V
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 240 PAVYEEMVSSG 250
+ EM G
Sbjct: 436 LEMMREMGQKG 446
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NG+ P+R YN ++ + K L A E M + PD T+N LI+ C AG
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
EL M+ P V+TYN +I+ + L+ +M++ G+ N VT
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 121 LVDVYGKSGRFNDALECLEVLKSM-GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+ K + ++ L M GF P Y+ LI AY + G A+ R+M +
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+K + + LN++++A ++R+ EA +L + D VTY TL+ R +K K
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 240 PAVYEEMVSSGCTP 253
+++EM TP
Sbjct: 506 LEMWDEMKKVKITP 519
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK V PD YN++I+ + + + M S +++PD VT+NTLID + G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFT 119
A +L ++M+ G +T+NI + + +EK + V+ + + G P+ VT+
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
TL+ Y K G + ALE + + G K N +++A + D+A N
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G + +LI F + + +A + MK+ + P V T+ +L+ L K
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 240 PAVYEEMVSSGCTPD 254
++E+ SG PD
Sbjct: 541 MEKFDELAESGLLPD 555
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G PD Y+ +I + K L A+ M + I+ +T+T NT++D CK D
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 64 AEELFQEMQQKGY-----------------------------------SPCVLTYNIMIN 88
A L ++G+ +P V T+N +I
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ K + + + GLLP+ TF +++ Y K GR A E FKP
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
N L+N + G++++A+N F + E + + N++I+AF +D++ EA+ +L
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKF 236
M+E L+PD TY + + L+ K
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 43/294 (14%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI-----RPDTVTWNTLIDCH 55
M+++GV+ ++ +N+ + K+ C + R + E + PD VT++TLI +
Sbjct: 371 MENDGVKANQVTHNISL----KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 56 CKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
K G A E+ +EM QKG +T N +++++ + K D+ +LL +G + +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
VT+ TL+ + + + ALE + +K + PT + +N+LI G ++ A+ F +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD---------------- 219
+ GL P NS+I + ++ R +AF ++ +PD
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 220 ------------------VVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
VTY T++ A + K + + EM G PDR
Sbjct: 607 TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK---AGYHDRA 64
P + +++ + + A+ F++M+ +++P+ +T NTL+ + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVD 123
E+F +M + G S V T+N+++N + K + +L RM S+ + P+ VT+ T++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K GR +D E L +K G P YN L+ Y + G +A M + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
L N LIN E ++ MK LQPDVVTY TL+ + + +
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 244 EEMVSSGCTPDR 255
E+M + G ++
Sbjct: 369 EQMENDGVKANQ 380
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM-QQKGYSPCVLTYN 84
+ A F+ M+ + + T+N L++ +C G + A + + M + +P +TYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
++ +M + + + +LL M+ GL+PN VT+ LV Y K G +A + +E++K
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
P YN LIN G + + M + L+P ++ N+LI+ E EA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS-SGCTPD 254
+++ M+ + ++ + VT+ +K L + +K V +E+V G +PD
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+ +G+ PD +N +I + K ++ A + + +PD T N L++ CK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A F + ++ V TYN MI++ +K + DLL+ M+ +GL P+ T+ +
Sbjct: 607 TEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 121 LVDVYGKSGRFNDALECLE 139
+ + + G+ ++ E L+
Sbjct: 666 FISLLMEDGKLSETDELLK 684
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + P +N +I + AM F+ + + PD T+N++I +CK G
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A E + E + + P T NI++N + + ++ + + + + + VT+ T
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNT 630
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ + K + +A + L ++ G +P YN+ I+ + G + +K + +
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+ + N +I+ + K L A F RM ++PD T+NTL+D +C+AGY D A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+L +M QK P V+TYNI++ + V L M +G+ + ++ +TL++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
K G FN+A++ E + + G N +I+ + ++A + KP+
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 540
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +L + + + EAFAV +YM+ + P + Y TL+ + +KV +
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 245 EMVSSGCTP 253
E+ + G TP
Sbjct: 601 ELRARGLTP 609
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK-GYSPCVLTYNIMI 87
A+ +++M+S E+ PD T + +++ +C++G D+A +E + G V+TYN +I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 88 NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK----- 142
N + ++ +L M +G+ N VT+T+L+ Y K G +A E+LK
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 143 ------------------------------SMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
+G + T+ N+LIN Y + G +A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
F +M LKP N+L++ + EA + M + ++ P V+TY L+K R
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ FH V ++++ M+ G D + + L AL
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K + D+H Y V++D + + + A+ + M+ +R +T N+LI+ +CK+G
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE++F M P TYN +++ D+ L +M + ++P +T+
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y + G F+D L +++ G + L+ A + G ++A+ + + A G
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L + LN +I+ + + EA +L + +P V TY L +V +
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 241 AVYEEMVSSGCTP 253
AV E M G P
Sbjct: 562 AVKEYMERKGIFP 574
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++PD H YN ++D + + +D A+ ++M +E+ P +T+N L+ + + G
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
L++ M ++G + ++ + ++ ++ +++ L + ++GLL + +T
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K + N+A E L+ + KP Y AL + Y + G +A M +G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P++ N+LI+ + R + ++ ++ L P V TY L+ + K
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 241 AVYEEMVSSGCT 252
A EM+ G T
Sbjct: 632 ATCFEMIEKGIT 643
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE-IRPDTVTWNTLIDCHCKAGYH 61
S G++ + YN +I+ + ++ M R++SE + + VT+ +LI +CK G
Sbjct: 254 SLGLELNVVTYNSLINGYAMIGDVE-GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ AE +F+ +++K Y ++++ + + M G+ N +L
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
++ Y KSG+ +A + + KP YN L++ Y + G D+A+ +M + +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+++ N L+ + + ++ + M + + D ++ +TL++AL ++ F++
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 242 VYEEMVSSGCTPDRKARAMLRSALRYMRQT 271
++E +++ G D ++ S L M +
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKV 522
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 110/253 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV + Y +I + K ++ A FE + +++ D + L+D +C+ G
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + M + G N +IN + + + +RM L P+ T+ T
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LVD Y ++G ++AL+ + + PT YN L+ Y++ G ++ ++ M G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++ ++L+ A + EA + + + L D +T ++ L +++K ++
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 241 AVYEEMVSSGCTP 253
+ + + C P
Sbjct: 527 EILDNVNIFRCKP 539
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE-IRPDTVTWNTLIDCHCKAGYHDRAEE 66
P+ YNV I K L+ A F +LS + PD T+ LI AG ++A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
L EM KG P ++TYN +I + D+ LL ++ +G+ PNA+T+ TL+D
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 127 KSGRFNDALECLEVLKSMGF 146
KSG +A+ E + G
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 39/289 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ P YN +I K+ L+ + + + P T+ LI C G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL----------------- 103
D+A EM +KG + V + + NS+ +K D+ LL
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 104 --------TRMQSQG-------------LLPNAVTFTTLVDVYGKSGRFNDALECL-EVL 141
T +++Q L+PN + + + K+G+ DA + ++L
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
S F P Y LI+ A G ++A +M +G+ P+++ N+LI +
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
A +L + + + P+ +TY TL+ L++ + + E+M+ G
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
P+ + +N I CKAG + A +LF ++ + P TY I+I+ ++
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
L M +G++PN VT+ L+ K G + A L L G P YN LI+
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 162 QRGLSDQAVNAFRKMTAEGL 181
+ G +A+ KM +GL
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+ S+ PD + Y ++I ++ A + M + I P+ VT+N LI CK G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL 112
DRA+ L ++ QKG +P +TYN +I+ + + L +M +GL+
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 113/288 (39%), Gaps = 40/288 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV D + +++ K + AM +E +L+ + DT+T N +I CK
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 61 HDRAEELF-----------------------------------QEMQQKGYSPCVLTYNI 85
+ A+E+ + M++KG P + YN
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALE-CLEVLKSM 144
+I+ ++V+DL+ ++++GL P T+ L+ + G + A C E+++
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK- 640
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA-EGLKPSLLALNSLINAFGED--RRD 201
G + + + N+ + D+A +K+ + L P +L + A +
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
A +V + L P+ + Y + L + K ++ +++SS
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLV 122
AE + +K P + YN+ I + K + L + + S +P+ T+T L+
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+G N A + + G P YNALI + G D+A K+ +G+
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
P+ + N+LI+ + EA + + M E L
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++S G++P V++++ K D F++M+ + + +N L+ K+G
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++AE+L EM++KG P + TYN +I+ + + + RM+ G+ PN VT+ +
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + + GR +A +K Y LI+ Y + D+A+ M + G
Sbjct: 279 FIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ NS++ ED R EA +L M ++PD +T TL+ A +++
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 241 AVYEEMVSSGCTPD 254
V ++M+ SG D
Sbjct: 398 KVKKKMIESGLKLD 411
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +GV P+ YN I F + + A F R + +++ + VT+ TLID +C+
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDGYCRMND 322
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L + M+ +G+SP V+TYN ++ + + + + LLT M + + P+ +T T
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 121 LVDVYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
L++ Y K D + ++V K M G K Y ALI+ + + + A M
Sbjct: 383 LINAYCK---IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+G P + L++ F + E +L+ ++ L DV Y L++ + ++++
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 238 KVPAVYEEMVSSGCTPD 254
++E M G D
Sbjct: 500 YAKVLFESMEKKGLVGD 516
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 37 LSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKW 96
+SE+ + ++ L+ + KAG + + +F++++ G P + +++NS+ Q
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 97 DQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL 156
D V + +M G++ N + LV KSG A + L ++ G P YN L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 157 INAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
I+ Y ++ + +A++ +M G+ P+++ NS I+ F + R EA + + +K+ D+
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DV 303
Query: 217 QPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ VTYTTL+ R++ + + E M S G +P
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y +ID + + N +D A+ E M S P VT+N+++ C+ G A L EM
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
K P +T N +IN+ E + +M GL + ++ L+ + K
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A E L + GF P Y+ L++ + + D+ + GL + LI
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ + A + + M++ L D V +TT+ A R K + A+++ M
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++PD N +I+ + K + A+ ++M+ ++ D ++ LI CK
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A+E M +KG+SP TY+ +++ Q K D+++ LL + +GL + +
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRG 487
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K + + A E ++ G ++ + AY + G +A F M
Sbjct: 488 LIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRR 547
Query: 181 LKPSLLALNSLINAFGED 198
L +L S+ ++ D
Sbjct: 548 LMVNLKLYKSISASYAGD 565
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 8/230 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE----EIRPDTVTWNTLIDCHC 56
M+S G P YN ++ C D + R+L+E +I PD +T NTLI+ +C
Sbjct: 333 MESRGFSPGVVTYNSILRKL----CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
K A ++ ++M + G + +Y +I+ + + + L M +G P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T++ LVD + + ++ + LE + G +Y LI + D A F M
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+GL + ++ A+ + EA A+ M L ++ Y ++
Sbjct: 509 EKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 31/288 (10%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P N+++ ++ A A +E M+ I P +T+NT++D KAG
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+R ++++ EM+++ +TYNI+IN K ++ M+ G +F
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTM---------------------------- 152
L++ Y K G F+DA + + + G PT +
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD 373
Query: 153 ---YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
YN L++ Y + G +A F + A + PS++ N+LI+ E A + +
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
M + PDV+TYTTL+K ++ VY+EM+ G PD A
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + + PD Y ++ F K L A ++ ML + I+PD + T + G
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 61 HDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D+A L +EM ++P + YN+ I+ + + + ++ GL+P+ VT+T
Sbjct: 495 SDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
T++ Y ++G+F A + + P+ Y LI +A+ G +QA +M
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G++P+++ N+L+ + EA+ L M+E + P+ +YT L+ +K+ +V
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 240 PAVYEEMVSSGCTPD 254
+Y+EM+ PD
Sbjct: 675 VKLYKEMLDKEIEPD 689
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 5/254 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G+ P YN+ I F +D A +LS PD V++NTL+ + K G
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGK 389
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LF +++ P ++TYN +I+ + + L M +Q + P+ +T+TT
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA-E 179
LV + K+G + A E + + G KP Y + G SD+A +M A +
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P L N I+ + +A + + L PD VTYTT+++ + +F
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 240 PAVYEEMVSSGCTP 253
+Y+EM+ P
Sbjct: 570 RNLYDEMLRKRLYP 583
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 30 MATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINS 89
+ +FE+M+ + P N ++ + ++A +++ M + G P V+T+N M++S
Sbjct: 188 LLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS 247
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
++V + M+ + + + VT+ L++ + K+G+ +A ++ GF T
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
P +N LI Y ++GL D A +M G+ P+ N I A + R +A +L
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
M PDVV+Y TLM I++ KF + +++++ + P
Sbjct: 368 SMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 36/297 (12%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S+ PD YN ++ + K A F+ + + +I P VT+NTLID C++G +
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL- 121
A+ L +EM + P V+TY ++ +++ M +G+ P+ +TT
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 122 -----------------------------------VDVYGKSGRFNDALECLEVLKSMGF 146
+D K G A+E + +G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
P Y +I Y + G A N + +M + L PS++ LI + R +AF
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
MK+ ++P+V+T+ L+ + + + +M G P++ + ML S
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIR-PDTVTWNTLIDCHCKAG 59
M G++PD + Y + D A E M++ + PD +N ID CK G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+A E +++ + G P +TY +I ++ +L M + L P+ +T+
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ + K+GR A + +K G +P +NAL+ + G D+A KM E
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
G+ P+ + LI+ + + E + + M + +++PD T+ L K L
Sbjct: 650 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD YNV ID K L A+ ++ + PD VT+ T+I + + G A L
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+ EM +K P V+TY ++I + +Q T M+ +G+ PN +T L+ K
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+G ++A L ++ G P Y LI+ ++ V +++M + ++P
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 188 LNSLINAFGEDRRDPEA 204
+L +D E
Sbjct: 693 HRALFKHLEKDHESREV 709
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
D Y ++I + K LD A F++M ++RP +++L+D KAG D + +++
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
EMQ G+ P + +I+S K D L M+ G PN +T +++ + KS
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
G+ A+ + ++ GF PTP+ Y+ L+ +A G D A+ + MT GL+P L +
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 189 NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
SL+ R A +L MK DV LM
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
+ +G + D YN ++ F A +E M + D T+ +I K+G
Sbjct: 270 QESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRL 329
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D A +LFQ+M+++ P ++ +++SMG + D + MQ G P+A F +L
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D Y K+G+ + AL + +K GF+P +Y +I ++A+ G + A+ F+ M G
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
P+ + L+ + A + M L+P + +Y +L+ L
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 115/241 (47%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN +I K L+ A F++ + DT T+N L+ G +A E+++ M+
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ TY ++I S+ + D L +M+ + L P+ F++LVD GK+GR +
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+++ ++ G +P+ TM+ +LI++YA+ G D A+ + +M G +P+ +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + + A V + M++ P TY+ L++ + +Y M ++G
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 253 P 253
P
Sbjct: 486 P 486
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK ++P ++ ++D+ GK LD +M + M RP + +LID + KAG
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L+ EM++ G+ P Y ++I S K + + M+ G LP T++
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++++ SG+ + A++ + + G +P + Y +L+ A + L D A +M A G
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ A + L+ + +D A L++M + ++ + L ++ ++ +
Sbjct: 519 YSVDVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSAR 577
Query: 241 AVYEEMVSSGCTPD 254
+ E +V S D
Sbjct: 578 PLLETLVHSAGKVD 591
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 34/299 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ + V P+ +N+MI K +D + +ERM E D T+++LI C AG
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 61 HDRAEELFQEMQQK--------------GYSPC--------------------VLTYNIM 86
D+AE +F E+ ++ G+ C +++YNI+
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNIL 365
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
I + K D+ + + M ++G + T+ + +G N AL ++ ++S G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
Y ++I+ ++ ++A N ++M+ G++ + N+LI D R EA
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
L+ M +N +P VV+Y L+ L + KF + A +EM+ +G PD K ++L L
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 14/271 (5%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
++ GV P+ YNV+I K + A + M E +PD +++T+I+ KAG
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSM-------GAQEKWDQVSDLLTRMQSQGLLPN 114
D A ELF EM ++G +P V YNI+I+ A E WD++ ++ + PN
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL------LEDSSVYPN 254
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
T ++ K GR +D L+ E +K + Y++LI+ G D+A + F
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
++ ++ N+++ F + E+ + + M+ + ++V+Y L+K L+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENG 373
Query: 235 KFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
K + ++ M + G D+ + L
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK-GYSPCVLTYN 84
++H E + S+E + D ++I + K D+A ++F+ M++ G P + +YN
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
++N+ ++W +V L ++ G+ PN T+ L+ + K F A L+ +
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
GFKP Y+ +IN A+ G D A+ F +M+ G+ P + N LI+ F +++ A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 205 FAVL-QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ + ++++ + P+V T+ ++ L + + ++E M
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G D+ Y + I ++ A+ + + S D + ++IDC CK
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A L +EM + G N +I + + + S L M G P V++
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K+G+F +A ++ + G+KP Y+ L+ + D A+ + + G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L+ ++ N LI+ + +A V+ M+ + ++VTY TLM+ +V ++
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 241 AVYEEMVSSGCTPD 254
++ M G PD
Sbjct: 625 VIWGYMYKMGLQPD 638
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++S+G D + Y +ID K L+ A + M + ++ N LI +
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +EM + G P V++YNI+I + K+ + S + M G P+ T++
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + + ALE G + M+N LI+ G D A+ M
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+L+ N+L+ F + A + YM + LQPD+++Y T+MK L
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +GV+ + H N +I + + L A M RP V++N LI CKAG
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +EM + G+ P + TY+I++ + K D +L + GL + +
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ G+ +DA+ + ++ YN L+ + + G S++A + M G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
L+P +++ N+++ R A + + + P V T+ L++A++
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN M+ F + + ++ + R++ + + V++N LI + G D A +++ M
Sbjct: 328 YNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
KGY+ TY I I+ + ++ ++ ++S G + + +++D K R
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A ++ + G + + NALI + +A R+M G +P++++ N LI
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+ + EA A ++ M EN +PD+ TY+ L+ L R K ++ + + SG
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 253 PD 254
D
Sbjct: 567 TD 568
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN++I + +D A + M ++ D T+ I C GY ++A + QE++
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G V Y +I+ + +++ ++ S+L+ M G+ N+ L+ + R
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A L + G +PT YN LI + G +A ++M G KP L + L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
DR+ A + ++ L+ DV+ + L+ L V K V M CT
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 253 PD 254
+
Sbjct: 602 AN 603
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 2/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD Y+ +I+ K LD A+ F+ M + PD +N LID K
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 HDRAEELFQE-MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
H A EL+ ++ P V T+NIMI+ + + D + RM+ + T++
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L+ +G + A L YN ++ + + G +++ +R M +
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
++++ N LI E+ + EA + + M D TY + L +K
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSAL 265
V +E+ SSG D A A + L
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCL 439
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ GY+ + Y+ ++ + + VS ++ ++SQ + +++ YGK+
Sbjct: 35 RHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMP 94
Query: 132 NDALECLEVLKSM-GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
+ AL+ + ++ + G +P YN L+NA+ + + + F G+ P+L N
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
LI + + +A L +M + +PDV +Y+T++ L + K +++EM G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 251 CTPD 254
PD
Sbjct: 215 VAPD 218
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ P+ Y +I + K D A +M +PD VT+ LI +G+ D A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ ++ +G SP YN++++ + ++ L + M + +LP+A + TL+D
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ +SG F++A + + G K +NA+I + + G+ D+A+ +M E L P
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+++I+ + + + A + +YM++N +P+VVTYT+L+ F ++
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 245 EMVSSGCTPDRKARAMLRSALRYMRQTLK 273
EM P+ L +L TL+
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+N +PD YN++I+ K + A+ + + + P+ +++ LI +CK+ +D
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A +L +M ++G P ++TY I+I+ + D ++ ++ +G+ P+A + L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
K+GRF A + P +Y LI+ + + G D+A F +G+K
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
++ N++I F EA A + M E L PD TY+T++ ++ +
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Query: 243 YEEMVSSGCTPD 254
+ M + C P+
Sbjct: 578 FRYMEKNKCKPN 589
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 7/258 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD Y ++I +D A+ +++ + PD +N L+ CK G
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ LF EM + P Y +I+ +D+ + + +G+ + V
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + +SG ++AL C+ + P Y+ +I+ Y ++ A+ FR M
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 181 LKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR-VDKF 236
KP+++ SLIN F G+ + E F +Q DL P+VVTYTTL+++L +
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL---RDLVPNVVTYTTLIRSLAKESSTL 642
Query: 237 HKVPAVYEEMVSSGCTPD 254
K +E M+++ C P+
Sbjct: 643 EKAVYYWELMMTNKCVPN 660
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDL 102
P+ V +NT+I +CK G + A +F+E++ KG+ P + T+ MIN + + L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 103 LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
L+ ++ +GL + ++D + G D E + + + KP YN LIN +
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
G + AV + + +GL P+ L+ LI A+ + + A +L M E +PD+VT
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
Y L+ L+ + +++ G +PD ML S L
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG-----YSPCVLTYNIMINSMGAQEKWD 97
PD + N+L+ K+ A +++ EM +G YS C+L + M + K +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL-----VKGMCNEGKVE 222
Query: 98 QVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
L+ +G +PN V + T++ Y K G +A + LK GF PT + +I
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
N + + G + ++ GL+ S+ LN++I+A + + ++ ND +
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
PDV TY L+ L + K +E G P+ + A L A
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 52/242 (21%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+ D +N MI F + LD A+A RM E + PD T++T+ID + K A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++F+ M++ P V+TY +IN Q + + MQ + L+PN VT+TTL+
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 125 YGK-SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR-------------------- 163
K S A+ E++ + P +N L+ + ++
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLF 694
Query: 164 ----------GLSDQAVNAFR--------------------KMTAEGLKPSLLALNSLIN 193
G SD A A+ KM +G P ++ ++++
Sbjct: 695 SEFFHRMKSDGWSDHAA-AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILH 753
Query: 194 AF 195
F
Sbjct: 754 GF 755
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G + + +N M+DT K + A F++M + PD ++ L++ +
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
R +E+ +EM+ +G+ P V+ Y I+IN+ +K+++ M+ + P+ F +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ G + NDALE E KS GF YNAL+ AY + A +M +G
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P+ + +++ +R EA+ V Q M +P V TY +++ ++
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAI 424
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+++EM G P + L +AL
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLITAL 449
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+ A+ F +M + ++ +N ++D K+ A+++F +M++K + P + +Y I
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++ G + +V ++ M+ +G P+ V + +++ + K+ ++ +A+ ++
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
KP+P ++ +LIN + A+ F + + G N+L+ A+ +R +A+
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ M+ + P+ TY ++ LIR+ + + VY+ M C P
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEP 402
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
QKG+ YN +I S+G +++ + L+ M+++ LL TF + Y ++ +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVK 179
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A+ ++ GFK + +N +++ ++ A F KM + +P + + L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+G++ V + MK+ +PDVV Y ++ A + K+ + + EM C
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 253 P 253
P
Sbjct: 300 P 300
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +P H + +I+ G L+ A+ FER S + T+N L+ +C +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A + EM+ KG P TY+I+++ + ++ + ++ M + P T+
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEI 409
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V ++ R + A++ + +K G P M+++LI A D+A F +M G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 181 LKP 183
++P
Sbjct: 470 IRP 472
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN +I++ GK + + M ++++ T+ + + +A A F +M+
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G+ +N M++++ + +M+ + P+ ++T L++ +G+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
E +K GF+P Y +INA+ + ++A+ F +M KPS SLI
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
N G +++ +A + K + + TY L+ A + +EM G
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 253 PDRKARAMLRSALRYMRQT 271
P+ + ++ L M+++
Sbjct: 370 PNARTYDIILHHLIRMQRS 388
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G PD+ ++++I + A + F+ L + PD + + L+ C+AG
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGE 270
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE++F+EM+ G P V TY+I+I+++ + + D+ M G PNA+TF
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ V+ K+GR L+ +K +G +P YN LI A+ + + AV M +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
+ + N++ + R A + M E +P+ VTY LM+ +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQE 70
H YN MID GK D A + M S + T+ LI + +AG A F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
M+ G P + ++I+I+++ + + + ++ + P+ + +T LV + ++G
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
++A + + +K G +P Y+ +I+A + G +A + F M G P+ + N+
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
L+ + R + V MK+ +PD +TY L++A R + V M+
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 251 C 251
C
Sbjct: 391 C 391
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++P+ + Y+++ID + + A F ML P+ +T+N L+ H KAG
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ +++ +M++ G P +TYN +I + E + +L M + NA TF T
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ K N A + +P YN L+ + +D + ++M +
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKV 239
++P++ L+ F A+ + + M +E L P + Y ++ L R + K
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKH 520
Query: 240 PAVYEEMVSSG 250
+ E+M+ G
Sbjct: 521 EELVEKMIQKG 531
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ ++D+ GK +F+ A ++++KS + + + LI Y + GL+ +AV+ F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
G P +A + +I+ RR EA + +K+ +PDV+ YT L++ R +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ V++EM +G P+ +++ AL
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P+ + V++ F N + A+ + M + PD + L+D CK G A
Sbjct: 165 IEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++F++M++K + P + + ++ + K + ++L +M+ GL P+ V FT L+ Y
Sbjct: 223 KVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ-RGLSDQAVNAFRKMTAEGLKPS 184
+G+ DA + + ++ GF+P Y LI A + D+A+ F +M G +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ +LI+ F + + ++VL M++ + P VTY +M A + ++F + + E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 245 EMVSSGCTPD 254
+M GC PD
Sbjct: 402 KMKRRGCHPD 411
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD + + ++D K + A FE M E+ P+ + +L+ C+ G
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGK 251
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+E+ +M++ G P ++ + +++ K DL+ M+ +G PN +T
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 121 LVDVYGKS-GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ ++ R ++A+ ++ G + Y ALI+ + + G+ D+ + M +
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+ PS + ++ A + + E +++ MK PD++ Y +++ ++ + +
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 240 PAVYEEMVSSGCTP 253
++ EM ++G +P
Sbjct: 432 VRLWNEMEANGLSP 445
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNC-LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
M+ G +P+ + Y V+I + +D AM F M D VT+ LI CK G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D+ + +M++KG P +TY ++ + +E++++ +L+ +M+ +G P+ + +
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ + K G +A+ +++ G P + +IN + +G +A N F++M +
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 180 GL--KPSLLALNSLINAFGEDRRDPEAFAVLQYM--KENDLQPDVVTYTTLMKAL 230
G+ P L SL+N D + A V + K + + +V +T + AL
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHAL 531
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ ++ ++ + + L A +M + PD V + L+ + AG A +L
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEK-WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+M+++G+ P V Y ++I ++ EK D+ + M+ G + VT+T L+ +
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G + L+ ++ G P+ Y ++ A+ ++ ++ + KM G P LL
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N +I + EA + M+ N L P V T+ ++ + ++EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 247 VSSG 250
VS G
Sbjct: 474 VSRG 477
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVDVYGKSGR 130
+Q GY M+ + ++ V L+ M ++ L F L+ + +
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANM 182
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
A+E L+ + G +P ++ L++A + G +A F M E P+L S
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTS 241
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
L+ + + + EA VL MKE L+PD+V +T L+ K + +M G
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 251 CTPDRKARAMLRSAL 265
P+ +L AL
Sbjct: 302 FEPNVNCYTVLIQAL 316
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 128/258 (49%), Gaps = 6/258 (2%)
Query: 1 MKSNGVQP-DRHFYNVMIDT--FGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK 57
+KS + P + FYNV + + FG+ L MA M+ + + D +T++T+I C +
Sbjct: 176 VKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMAL--EMVKDGVELDNITYSTIITCAKR 233
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+++A E F+ M + G P +TY+ +++ K ++V L R + G P+A+
Sbjct: 234 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 293
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F+ L ++G++G ++ L+ +KSM KP +YN L+ A + G A + F +M
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
GL P+ L +L+ +G+ R +A + + MK D + Y TL+ +
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 238 KVPAVYEEMVSS-GCTPD 254
+ ++ +M S C PD
Sbjct: 414 EAERLFNDMKESVQCRPD 431
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +GV+ D Y+ +I + N + A+ FERM + PD VT++ ++D + K+G
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ L++ G+ P + ++++ G +D + +L M+S + PN V + T
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L++ G++G+ A + G P AL+ Y + + A+ + +M A+
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKV 239
+ N+L+N + + EA + MKE+ +PD +YT ++ K K
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 240 PAVYEEMVSSG 250
++EEM+ +G
Sbjct: 452 MELFEEMLKAG 462
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y+ ++D + K ++ ++ +ER ++ +PD + ++ L +AG
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D + QEM+ P V+ YN ++ +MG K L M GL PN T T
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 121 LVDVYGKSGRFNDALECLEVLK------------------------------------SM 144
LV +YGK+ DAL+ E +K S+
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
+P Y A++N Y G +++A+ F +M G++ +++ L+ G+ +R +
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 205 FAVLQYMKENDLQPD 219
V + ++PD
Sbjct: 487 VYVFDLSIKRGVKPD 501
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 63 RAEELFQEMQQKGYSPC-VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ F ++ K P + YN+ + S+ ++ + ++ M G+ + +T++T+
Sbjct: 168 KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 227
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ + +N A+E E + G P Y+A+++ Y++ G ++ ++ + + A G
Sbjct: 228 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 287
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
KP +A + L FGE VLQ MK D++P+VV Y TL++A+ R K +
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347
Query: 242 VYEEMVSSGCTPDRK---ARAMLRSALRYMRQTLK 273
++ EM+ +G TP+ K A + R+ R L+
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQ 382
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ ++ +GK A+ +E M +++ D + +NTL++ G
Sbjct: 352 MLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGL 411
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ AE LF +M++ P +Y M+N G+ K ++ +L M G+ N + T
Sbjct: 412 EEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCT 471
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
LV GK+ R +D + ++ G KP + L++ A
Sbjct: 472 CLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMA 513
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD YN++I + C D A+ F+ M+ ++++P VT+ TLI CK A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 67 LFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ +M + G P V Y +I ++ + L + +A ++TL+
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
K+GR N+ LE + G KP YN LIN + S+ A +M +GLKP +
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
++ N ++ F ++ EA + + M PD ++Y + L +F + + +E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 246 MVSSGCTPDR 255
M+ G P R
Sbjct: 389 MLFKGYKPRR 398
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 37/285 (12%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P + +I+ FG+ A+ F+ M + + N+L+ K G ++ +
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E + + G P TYNI+I+ +D L M + + P VTF TL+
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 126 GKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRG-------LSDQAVNA----- 172
K R +AL+ ++LK G +PT +Y +LI A Q G L D+A
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 173 -----------------------FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+M+ +G KP + N LIN F + A VL
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD 317
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M E L+PDV++Y ++ R+ K+ + ++E+M GC+PD
Sbjct: 318 EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPD 362
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K GV+P H Y +I + L A + +I+ D ++TLI KAG
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ + +EM +KG P +TYN++IN + + + +L M +GL P+ +++
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ V+ + ++ +A E + G P Y + + + ++A +M +G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 181 LKP 183
KP
Sbjct: 394 YKP 396
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++ D Y+ +I + K + E M + +PDTVT+N LI+ C + A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ EM +KG P V++YN+++ +KW++ + L M +G P+ +++ + D
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+ +F +A L+ + G+KP + + G
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+GV P+ YN+++ F + L A F +ML ++ PD ++ LI C+ G +
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A EL +M KG+ P L+Y ++NS+ + + + LL RM+ +G P+ V + T++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ + R DA + L+ + S G P Y LI +G+ D+ +M ++G P
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
N L+ F + EA V++ + +N T+ ++ + D+ K+
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 423
Query: 244 EEMVSSGCTPDRK 256
E+ V T D +
Sbjct: 424 EDAVKEEITGDTR 436
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 1/253 (0%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA-GY 60
+S+G + +I + + + ++TF +ML P N ++D GY
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A ELF+ + G P +YN+++ + + L +M + ++P+ ++
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G+ N A+E L+ + + GF P Y L+N+ ++ +A +M +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L+ N++I F + R +A VL M N P+ V+Y TL+ L F +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 241 AVYEEMVSSGCTP 253
EEM+S G +P
Sbjct: 351 KYLEEMISKGFSP 363
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M V PD Y ++I F + ++ AM + ML++ PD +++ TL++ C+
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L M+ KG +P ++ YN MI +++ +L M S G PN+V++ T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ G F++ + LE + S GF P ++ N L+ + G ++A + + G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 64 AEELFQ-EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+E+F QQ + ++ I+I +G ++ + D+L + +S G FT L+
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY-AQRGLSDQAVNAFRKMTAEGL 181
VY ++ L + F P P N +++ + RG +A F+ G+
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+ + N L+ AF + A+ + M E D+ PDV +Y L++ R + +
Sbjct: 187 MPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 242 VYEEMVSSGCTPDRKARAMLRSAL 265
+ ++M++ G PDR + L ++L
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSL 270
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 96/227 (42%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
L A F+ + P+T ++N L+ C A +LF +M ++ P V +Y I
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I + + + +LL M ++G +P+ +++TTL++ + + +A + L +K G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P YN +I + + + A M + G P+ ++ +LI + E
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
L+ M P L+K K + V E ++ +G T
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%)
Query: 42 RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
R D + +N +I + KA H++A LF+ M+ +G P TYN + + + D+
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
+L M G P T+ ++ Y + G +DA++ E ++ G KP +Y +LIN +A
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 162 QRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVV 221
+ G+ ++A+ FR M G++ + + L SLI A+ + EA V MK+++ PDV
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 222 TYTTLM 227
+++
Sbjct: 692 ASNSML 697
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 2/258 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N ++ D H V++ + + A A FER + + T T +ID + + G
Sbjct: 436 MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAVIDVYAEKGL 494
Query: 61 HDRAEELF-QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
AE +F + G VL YN+MI + G + ++ L M++QG P+ T+
Sbjct: 495 WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+L + ++A L + G KP Y A+I +Y + GL AV+ + M
Sbjct: 555 SLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT 614
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G+KP+ + SLIN F E EA + M+E+ +Q + + T+L+KA +V +
Sbjct: 615 GVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 240 PAVYEEMVSSGCTPDRKA 257
VY++M S PD A
Sbjct: 675 RRVYDKMKDSEGGPDVAA 692
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 38/291 (13%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N +ID +GK L+ A F ML + DTVT+NT+I G+ AE L ++M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV-------- 124
+KG SP TYNI+++ + + +++ GL P+ VT ++ +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 125 ---------------------------YGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
Y G A E + + + T A+I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVI 486
Query: 158 NAYAQRGLSDQAVNAF-RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
+ YA++GL +A F K G + +L N +I A+G+ + +A ++ + MK
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 217 QPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA-RAMLRSALR 266
PD TY +L + L VD + + EM+ SGC P K AM+ S +R
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G + D YNVMI +GK + A++ F+ M ++ PD T+N+L D
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A+ + EM G P TY MI S DL M+ G+ PN V + +L++
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ +SG +A++ +++ G + + +LI AY++ G ++A + KM P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ A NS+++ + EA ++ ++E DV+++ T+M + + V
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 244 EEMVSSGCTPD 254
EEM SG D
Sbjct: 748 EEMRESGLLSD 758
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G PD YN + + +D A ML +P T+ +I + + G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +L++ M++ G P + Y +IN ++ M+ G+ N + T+
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ Y K G +A + +K P N++++ A G+ +A + F + +G
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+++ +++ + EA V + M+E+ L D ++ +M + +
Sbjct: 721 -TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC 779
Query: 241 AVYEEMV 247
++ EM+
Sbjct: 780 ELFHEML 786
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
T T+NTLID + KAG + A LF EM + G +T+N MI++ G + LL
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR- 163
+M+ +G+ P+ T+ L+ ++ +G ALE ++ +G P + A+++ QR
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 164 ----------------------------------GLSDQAVNAFRKMTAEGLKPSLLALN 189
GL QA F + + + S L
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLA 483
Query: 190 SLINAFGEDRRDPEAFAVLQYMKEN--DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
++I+ + E EA V Y K N + DV+ Y ++KA + K ++++ M
Sbjct: 484 AVIDVYAEKGLWVEAETVF-YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 248 SSGCTPD 254
+ G PD
Sbjct: 543 NQGTWPD 549
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
T+N +I+ G + + ++L + M G+ + VTF T++ G G ++A L+ +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
+ G P YN L++ +A G + A+ +RK+ GL P + ++++ + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
E AV+ M N IR+D+ H VP + + V+ G KA
Sbjct: 427 AEVEAVIAEMDRNS---------------IRIDE-HSVPVIMQMYVNEGLVVQAKA 466
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 41/301 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +GVQ + +I + K CL+ A +++M E PD N+++ G
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGI 705
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
AE +F +++KG V+++ M+ D+ ++ M+ GLL + +F
Sbjct: 706 VSEAESIFNALREKGTCD-VISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 121 LVDVYGKSGRFNDALECLE--------------------VLKSMGF-------------- 146
++ Y G+ ++ E +LK G
Sbjct: 765 VMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE 824
Query: 147 -KP--TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
KP TP + L +A GL A+ + +++T+ + A N++I +
Sbjct: 825 AKPLATPAITATLFSAM---GLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
A M+E L+PD+VT L+ + V V+ + P + +R
Sbjct: 882 ALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRD 941
Query: 264 A 264
A
Sbjct: 942 A 942
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+P+ Y +I+ F + ++ A+ F M ++ + + +LI + K G
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ++ +M+ P V N M++ + + ++ +G + ++F T
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFAT 729
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ +Y G ++A+E E ++ G T +N ++ YA G + F +M E
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 67/276 (24%)
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
R FQ Q Y P V+ YNI++ ++G KWD++ M G+LP T+ LV
Sbjct: 130 RVFRFFQSHQS--YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLV 187
Query: 123 DVYGKSGRFNDALECLEVL-KSMGFKPTPTMYNAL------------------------- 156
DVYGK+G +AL ++ + + M F TM +
Sbjct: 188 DVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVD 247
Query: 157 -----INAYAQRGLSDQAVNAFRKMTAEGLK-----------------------PSLLA- 187
I+ + + G + VN + ++ E K P L +
Sbjct: 248 LDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTST 307
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N+LI+ +G+ R +A + M ++ + D VT+ T++ + ++ ++M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 248 SSGCTPDRKARAMLRS----------ALRYMRQTLK 273
G +PD K +L S AL Y R+ K
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 30/272 (11%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ YN+++ G+ D + M + P T+ L+D + KAG A
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF-TTLVDVYG 126
+ M Q+ + P +T ++ ++D+ +G V +D +
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-----KGWCAGKVDLDLDSIDDFP 257
Query: 127 KSGRFNDALECLEVL--------------KSMGF---------KPTPT-MYNALINAYAQ 162
K+G + + L KS+ F KP T +N LI+ Y +
Sbjct: 258 KNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGK 317
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
G + A N F +M G+ + N++I+ G EA ++L+ M+E + PD T
Sbjct: 318 AGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKT 377
Query: 223 YTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
Y L+ Y ++ G PD
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPD 409
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKF-NCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
MK +G++PD YN ++ K N A+ + I+ D+V + T++ G
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ AE Q+M+ +G+SP + Y+ ++NS + + + +L+T M+S GL+PN V T
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
TL+ VY K G F+ + E L L+S G+ Y L++ ++ G ++A + F M +
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G++ A + +I+A +R EA + + + + D+V T++ A R + V
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 240 PAVYEEMVSSGCTPD 254
+ ++M +PD
Sbjct: 432 MRMMKKMDEQAVSPD 446
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y+ I G N + A+ ++ + E + + N+++ C K G D +LF +M+
Sbjct: 135 YSSCIKFVGAKN-VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMK 193
Query: 73 QKGYSPCVLTYNIMI-NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ G P V+TYN ++ + + + + +L+ + G+ ++V + T++ + +GR
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRS 253
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+A ++ +K G P Y++L+N+Y+ +G +A +M + GL P+ + + +L
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+ + + + +L ++ + + Y LM L + K + +++++M G
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 252 TPDRKARAMLRSAL 265
D A +++ SAL
Sbjct: 374 RSDGYANSIMISAL 387
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTF---GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK 57
MK G P+ + Y+ +++++ G + D M M S + P+ V TL+ + K
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT---EMKSIGLVPNKVMMTTLLKVYIK 319
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
G DR+ EL E++ GY+ + Y ++++ + K ++ + M+ +G+ +
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ ++ +S RF +A E ++ K M N ++ AY + G + + +KM
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 178 AEGLKPSLLALNSLINAFGEDR 199
+ + P + LI F +++
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEK 461
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS G+ P++ ++ + K D + + S + + + L+D KAG
Sbjct: 298 MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGK 357
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +F +M+ KG +IMI+++ +++ + +L ++ + V T
Sbjct: 358 LEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNT 417
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y ++G + ++ + P ++ LI + + L A M ++G
Sbjct: 418 MLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAV---LQYMK 212
+ +SLI G+ R EAF+V L+Y K
Sbjct: 478 HRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSK 512
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V+PD + +NV+ + + AM E M+ +P+ T+ ID C+AG D A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 66 ELFQEMQQKGYS---PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+LF M KG + P T+ +MI ++ +K ++ +L+ RM S G LP+ T+ ++
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ + + ++A + L+ + + G+ P YN + + +D+A+ + +M
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 183 PSLLALNSLINAFGEDRRDPE-AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
PS+ N LI+ F E DP+ AF M + D DV TY ++ L + +
Sbjct: 444 PSVQTYNMLISMFFE-MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 242 VYEEMVSSG 250
+ EE+V+ G
Sbjct: 503 LLEEVVNKG 511
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
QP+ + +N+++D K + A RM ++PD T+N L C+ +A +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL---PNAVTFTTLVD 123
L +EM + G+ P TY I++ D+ +DL M ++G P A TF ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K+ + + E + + S G P + Y +I D+A +M+ +G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
++ N + E+R+ EA + M E+ P V TY L+ +D +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 244 EEMVSSGCTPD 254
EM C D
Sbjct: 470 TEMDKRDCVQD 480
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 42 RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
+P+ +N L+D CK G E L + M+ + P T+N++ +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFK---PTPTMYNALIN 158
LL M G P T+ +D + ++G ++A + + + + G PT + +I
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
A A+ +++ +M + G P + +I + EA+ L M P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRS 263
D+VTY ++ L K + +Y MV S C P + ML S
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G PD Y +I+ +D A + M ++ PD VT+N + C+
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +L+ M + +P V TYN++I+ + D + T M + + + T+
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCA 486
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+++ R +A LE + + G K ++++ + ++ G
Sbjct: 487 MINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 36/297 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI-------- 52
+KS GV D + + V+I + K + A+ +F RM + RPD T+N ++
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 53 -------------DCHC---------------KAGYHDRAEELFQEMQQKGYSPCVLTYN 84
C+C K G A+++F +M +G SP +TY
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I+I+ + + D L MQ+ G P++V L+D + K GR +A E L + +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
GF Y++LI+ + QA + M + +KP ++ LI + + +A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+L M + PD Y ++KAL + ++ EM + PD +L
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 35/253 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+R Y ++I + D A F M + PD+V N L+D CK G
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A EL + ++ G+ + Y+ +I+ + ++ Q +L M + + P+ + +T
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K+G+ DAL+ L + S G P YNA+I A RGL ++ R + E
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG----RSLQLE- 398
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
M E + PD T+T L+ ++ R +
Sbjct: 399 ------------------------------MSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 241 AVYEEMVSSGCTP 253
++ E+ SGC+P
Sbjct: 429 EIFTEIEKSGCSP 441
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 18/287 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++PD Y ++I K ++ A+ M S+ I PDT +N +I C G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ L EM + P T+ I+I SM + ++ T ++ G P+ TF
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 LVDVYGKSGRFNDA---LECLEVLKSMG-FKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
L+D KSG +A L +EV + F N + + G +A
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHF 508
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV--- 233
G P +++ N LIN F A +L ++ L PD VTY TL+ L RV
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 234 ----------DKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQ 270
D F PAVY +++ C RK ++Y+++
Sbjct: 569 EEAFKLFYAKDDFRHSPAVYRSLMTWSCR-KRKVLVAFNLWMKYLKK 614
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F ++D+ + + + LE LKS G + LI+AYA+ G++++AV +F +M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 178 AEGLKPSLLALNSLINA-FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+P + N ++ E+ AFAV M + + P++ T+ LM L + +
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 237 HKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++++M G +P+R +L S L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGL 243
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 1/180 (0%)
Query: 83 YNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK 142
+ ++I+ + D L ++S G+ ++ F L+ Y K G A+E +K
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 143 SMGFKPTPTMYNALINAYAQRGLSDQ-AVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
+P YN ++ + + A + +M P+L L++ + R
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+A + M + P+ VTYT L+ L + ++ EM +SG PD A L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 120/244 (49%), Gaps = 7/244 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++P Y +ID + K HA+ +M ++PD VT ++ + KA
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 61 HDRAEELFQEM---QQKGYSPCVL---TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
+AEE F++ + K S L TYN MI++ G + + S+ RM +G++P
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
VTF T++ +YG +G+ + ++ +K + P YN LI+ + + ++A F+
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFK 391
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+M +GLKP ++ +L+ AF EA ++ M +++++ D T + L + + +
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAE 451
Query: 235 KFHK 238
K
Sbjct: 452 MLEK 455
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 39/280 (13%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI-------------------- 52
YNVMI +G + A FE M+S + PD T+NTL+
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 53 ------DC--HC-------KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWD 97
DC +C K G + AEE+++EM + P V+ Y ++IN+
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 98 QVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMY--N 154
Q + M+ G+ N+V + +L+ +Y K G ++A ++L+S P +Y N
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+IN Y++R + +A F M G + + ++ + ++ R EA + + M+E
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ D ++Y +++ +F + ++EMVSSG PD
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++PD Y V+I+ F + AM+ E M I ++V +N+LI + K GY D AE
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 66 ELFQEMQQ---KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+++++ Q K P V T N MIN + + + M+ +G N TF ++
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMML 724
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+Y K+GRF +A + + ++ M P YN+++ +A G +AV F++M + G++
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 183 P---SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRV 233
P + +L +++ G ++ A ++ +++ +++ + + + + +L+ +
Sbjct: 785 PDDSTFKSLGTILMKLGMSKK---AVRKIEEIRKKEIKRGLELWISTLSSLVGI 835
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 43/237 (18%)
Query: 60 YHDRAEELFQEMQQKG-YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
+ +RA E+F+ + KG Y V+ YNIM+ +G KW V L M +G+ P T+
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKP------------------------------ 148
TL+DVY K G AL L + +G +P
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 149 -----------TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGE 197
+ YN +I+ Y + G +A F++M EG+ P+ + N++I+ +G
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 198 DRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + E ++++ MK + PD TY L+ + + + A ++EM G PD
Sbjct: 346 NGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN MIDT+GK + A TF+RML E I P TVT+NT+I + G L + M+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL----------- 121
+P TYNI+I+ ++ M+ GL P+ V++ TL
Sbjct: 361 LHC-APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 122 ---------------VDVYGKSGRFNDALECLEVLKSMG----FKPTPTM----YNALIN 158
+D Y +S +E + KS F M Y+A I+
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
AY +RG +A F E K +++ N +I A+G + +A + + M + P
Sbjct: 480 AYGERGYLSEAERVFI-CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
D TY TL++ L D HK E+M +G D
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERM-LSEEIRPDTVTWNTLIDCHCKAG 59
M + V+ D + + + + + L+ + + F+R ++ + + + N ID + + G
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN--IDAYGERG 485
Query: 60 YHDRAEELF---QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
Y AE +F QE+ ++ V+ YN+MI + G + ++ +L M S G+ P+
Sbjct: 486 YLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ TLV + + + LE ++ G+ Y A+I+++ + G + A +++M
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
++P ++ LINAF + +A + ++ MKE + + V Y +L+K +V
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 237 HKVPAVYEEMVSS 249
+ A+Y +++ S
Sbjct: 662 DEAEAIYRKLLQS 674
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 103/276 (37%), Gaps = 33/276 (11%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD YN++I K N ++ A A F+ M + ++PD V++ TL+ + AE L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 68 FQEMQQKG-----YSPCVLTYNIMINSMGAQE-KWDQVSDLLTRMQSQGLLPN------- 114
EM Y+ LT + M + W + + M S+G N
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGER 484
Query: 115 --------------------AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
+ + ++ YG S A E E + S G P YN
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
L+ A + + KM G + ++I++F + + A V + M E
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 604
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
+++PDVV Y L+ A + + E M +G
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 10/268 (3%)
Query: 2 KSNG-VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+SNG V+ ++N +I ++G ++ F+ M I P +T+N+L+ K G
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A +LF EM++ G +P T+N +IN D+ + M+ P+ VT+
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 120 TLVDVYGKSGRFNDALECLEVL--KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
T++D ++G+ A L + K+ P Y L+ Y + D+AV F M
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML 308
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND----LQPDVVTYTTLMKALIRV 233
+ GLKP+ + N+LI E R E +L + ND PD T+ L+KA
Sbjct: 309 SRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 234 DKFHKVPAVYEEMVSSGCTPDRKARAML 261
V++EM++ PD + ++L
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVL 394
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
++ GV PD + +N +I+ F K + +D A F+ M PD VT+NT+ID C+AG
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 62 DRAEELFQEMQQKG--YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A + M +K P V++Y ++ +++ D+ + M S+GL PNAVT+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMG-------FKPTPTMYNALINAYAQRGLSDQAVNA 172
TL+ ++ R+++ + L +G F P +N LI A+ G D A+
Sbjct: 321 TLIKGLSEAHRYDEIKDIL-----IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 173 FRKMTAEGLKPSLLALNSLI------NAFGEDRRDP---EAFAVLQYMKENDLQPDVVTY 223
F++M L P + + LI N F DR + E F + +++ +P Y
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEF--DRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSG 250
+ + L K + V+ +++ G
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRG 460
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGK---FNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK 57
+ + G + +M++ G+ N + + + ER + ++ +N+LI +
Sbjct: 91 VSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGN 150
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAV 116
AG + +LFQ M+Q G SP VLT+N +++ + + + DL M ++ G+ P++
Sbjct: 151 AGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSY 210
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
TF TL++ + K+ ++A + ++ P YN +I+ + G A N M
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 177 --TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
A + P++++ +L+ + + EA V M L+P+ VTY TL+K L
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 235 KFHKVPAV 242
++ ++ +
Sbjct: 331 RYDEIKDI 338
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD +N++I LD AM F+ ML+ ++ PD+ +++ LI C DRAE L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 68 FQEMQQKGY-------SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
F E+ +K P YN M + A K Q + ++ +G+ + ++ T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKT 469
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G+F A E L ++ F P Y LI+ + G + A + ++M
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
P +S++ + + E+F ++ M E ++ ++ T +++ L
Sbjct: 530 YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 580
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ--SQGLLP-NAVTFTTLVD 123
F + KG+S ++ +M+ +G + + L ++ S G + F +L+
Sbjct: 87 FFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIR 146
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM-TAEGLK 182
YG +G F ++++ + +K MG P+ +N+L++ +RG + A + F +M G+
Sbjct: 147 SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
P N+LIN F ++ EAF + + M+ PDVVTY T++ L R K
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 117/239 (48%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P Y +++ +G+ + A TF ML PD V T++ + + G H
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
++ +Q++ YN M++S+ + +V DL M +G+ PN T+T +V Y
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G +AL+ +KS+GF P Y+++I+ + G ++A+ + M ++G+ PS
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
++++ + + P+A ++ M+ N + D V +++ ++ FH +++EE
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P + MID + + L+ A F + P VT + L++ G H AE +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
+ +K + YN +I +M K S++ RM + G+ + T+ T++ VYG+
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ + A+E + G +Y +I Y + G +A++ F +M +G+KP +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
N ++ R E +LQ M+ N D+ TY TL++ +F
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++GV YN MI +G+ LD A+ F + D + +I + K G
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A LF EMQ+KG P +YN+M+ +V +LL M+ G + T+ T
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLT 919
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ VY +S +F +A + + ++K G + + +++L++A + G+ ++A + KM+ G
Sbjct: 920 LIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAG 979
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ P +++ YM D + ++ Y ++++ + D+F V
Sbjct: 980 ISPDSACKRTILKG---------------YMTCGDAEKGILFYEKMIRSSVEDDRF--VS 1022
Query: 241 AVYEEM 246
+V E++
Sbjct: 1023 SVVEDL 1028
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 6/254 (2%)
Query: 4 NGVQPDRHFYNVMIDTF---GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
G P +++++ GK +H T L + I DTV +NTLI +AG
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRT---CLEKNIELDTVGYNTLIKAMLEAGK 789
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+++ M G + TYN MI+ G + D+ ++ + + GL + +T
Sbjct: 790 LQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTN 849
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ YGK G+ ++AL ++ G KP YN ++ A L + + M G
Sbjct: 850 MIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNG 909
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L +LI + E + EA + +KE + +++L+ AL++ +
Sbjct: 910 RCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Query: 241 AVYEEMVSSGCTPD 254
Y +M +G +PD
Sbjct: 970 RTYCKMSEAGISPD 983
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%)
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
Q Y P V+ Y I++ G K + M G P+AV T++ Y + GR +
Sbjct: 181 QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHS 240
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
L + ++ + ++YN ++++ ++ + ++ + +M EG+ P+ ++
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
+++ + EA MK P+ VTY++++ ++ + K +YE+M S G
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 253 P 253
P
Sbjct: 361 P 361
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 36/263 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M GV P+ Y +++ ++ K + A+ F M S P+ VT++++I KAG
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A L+++M+ +G P T M++ E + + L M+ + + V
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 121 LVDVYGKSGRFND-----------------------------------ALECLEVLKSMG 145
++ +YGK G F+D AL+ +E++K+
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD 463
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+ Y ++ YA+ D A AFR ++ GL P + N ++N + +A
Sbjct: 464 IPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAK 522
Query: 206 AVLQYMKENDLQPDVVTYTTLMK 228
++ + + + D+ Y T M+
Sbjct: 523 GFIKQIMVDQVHFDIELYKTAMR 545
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 6/253 (2%)
Query: 6 VQPDRHFYNVMIDTF---GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
++ D YN +I GK C A +ERM + + T+NT+I + + D
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQC---ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLD 826
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+A E+F ++ G Y MI G K + L + MQ +G+ P ++ +V
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ S ++ E L+ ++ G + Y LI YA+ +A + +G+
Sbjct: 887 KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
S +SL++A + EA M E + PD T++K + K
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 243 YEEMVSSGCTPDR 255
YE+M+ S DR
Sbjct: 1007 YEKMIRSSVEDDR 1019
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE-IRPDTVTWNTLIDCHCKAGYHDR 63
G +PD M+ T+ ++ AM TF + + E I T +N ++ K +H +
Sbjct: 218 GCEPDAVACGTMLCTYARWG-RHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGK 276
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+L+ EM ++G P TY ++++S Q ++ M+S G +P VT+++++
Sbjct: 277 VIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVIS 336
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ K+G + A+ E ++S G P+ +++ Y + +A++ F M +
Sbjct: 337 LSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPA 396
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ +I +G+ +A ++ + + +L D TY + + + K V
Sbjct: 397 DEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVI 456
Query: 244 EEM 246
E M
Sbjct: 457 EMM 459
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++D+ G+ A F++ L E P+ +T+ L++ C+ A ++ +M
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
+G P ++ +N+M+ + K L M+S+G PN ++T ++ + K
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A+E + + G +P +Y LI + + D ++M +G P N+LI
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ A + M +N+++P + T+ +MK+ + AV+EEM+ G P
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 254 DRKARAML----------RSALRYMRQTL 272
D + +L R A RY+ + L
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEML 535
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ Y V+++ + + L A + M+ + ++PD V N +++ ++ A +L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F M+ KG P V +Y IMI Q + + M GL P+A +T L+ +G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ + E L+ ++ G P YNALI A + + + A + KM ++PS+
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N ++ ++ R AV + M + + PD +YT L++ LI K + EEM+
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 248 SSG 250
G
Sbjct: 536 DKG 538
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+++G++ TYN M++ + +++ + +L M ++GLL TFT + + +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A+ E++K FK N L+++ + L +A F K+ E P+++ L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVL 304
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+N + R EA + M + L+PD+V + +++ L+R K ++ M S G
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 252 TPDRKARAML 261
P+ ++ ++
Sbjct: 365 CPNVRSYTIM 374
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
M + G P YN +I + N ++ +A+ ++ E + PD T+ +++ CK
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIED-LASLVNIIQELDFVPDVDTYLIVVNELCKKN 561
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D A + M++ G P V Y+ +I S+G Q + + + +M G+ P+ + +
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYM 621
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++ Y ++GR ++A E +E + +P+ Y LI+ + + G+ ++ KM +
Sbjct: 622 IMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED 681
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
GL P+++ +LI F + +F + M END++ D + Y TL+ L R
Sbjct: 682 GLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN 88
A++ E+M++ P ++N++I C + + L +Q+ + P V TY I++N
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ + D ++ M+ GL P +++++ GK GR +A E + G +P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
Y +IN YA+ G D+A ++ L+PS LI+ F + + L
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
M E+ L P+VV YT L+ ++ F ++ M + D A L S L
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATF-------------------------ER 35
M NG+ PD Y V++ K + L +AM E
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVES 463
Query: 36 MLSEEIRPDT----VTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMG 91
+L E R D V + C + A ++M G +P +YN +I +
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 92 AQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPT 151
+ + ++ L+ +Q +P+ T+ +V+ K + A ++ ++ +G +PT
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 152 MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
+Y+++I + ++G +A F KM G++P +A +IN + + R EA +++ +
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 212 KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ L+P TYT L+ +++ K ++M+ G +P+
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 5/271 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P Y V+I F K ++ ++ML + + P+ V + LI K G +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
LF M + + Y +++ + + ++ + LL + LV +
Sbjct: 708 TLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIP 767
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMY--NALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
G + +EV+ + P +Y N +I Y G D+A N M EG+ P
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+L+ L+ + E D E + + + + +PD V Y+TL+K L + A+
Sbjct: 828 NLVTYTILMKSHIE-AGDIE--SAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 244 EEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
EM SG P++ + L L Y R T+++
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCLCYSRLTMEA 915
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 120/318 (37%), Gaps = 65/318 (20%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +G D+ Y ++ + K N + AM + RM+ D +NTLI K G
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM 322
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMI-----------------NSMGAQE--------- 94
D+ +F +M +KG V TY+IMI N+ G+++
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 95 ----------KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
D+ DLL RM G++P+ +T+ L+ + K A+ L+ +
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN 442
Query: 145 GFKPTPTMYNALIN------------------------AYAQRGLSDQ-----AVNAFRK 175
G P + + L N A L Q A++ K
Sbjct: 443 GCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEK 502
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M G P + NS+I ++ + +++ ++E D PDV TY ++ L + +
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Query: 236 FHKVPAVYEEMVSSGCTP 253
A+ + M G P
Sbjct: 563 RDAAFAIIDAMEELGLRP 580
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 110/287 (38%), Gaps = 40/287 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G+ P+ Y +I F K + F M +I+ D + + TL+ +A
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Query: 61 HDRA---------EELFQEM----------------------------QQKGYSPCVLTY 83
+ E+L Q + +K P + +
Sbjct: 738 RKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLH 797
Query: 84 NIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS 143
N +I A + D+ + L MQ +G++PN VT+T L+ + ++G A++ E
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---G 854
Query: 144 MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
+P MY+ L+ A+ +M G+ P+ + L+ R E
Sbjct: 855 TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME 914
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
A V++ M D+ P + +T L+ L K + A++ MV SG
Sbjct: 915 AVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 34/289 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATF-ERMLSEEIRPDTVTWNTLIDCHCKAG 59
M GVQ + Y++MI ++ K +D+A+ F SE+I + + LI K G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIM-------------------------------IN 88
D+A +L M G P +TY ++ I+
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+G E +V LL + + AV + + AL +E + ++G P
Sbjct: 453 DLGNIEV--KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
P YN++I Q + + + + P + ++N + AFA++
Sbjct: 511 LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
M+E L+P V Y++++ +L + + + + +M+ SG PD A
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA 619
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 48 WNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ 107
+ +L C CK G AE LF M+ GY + Y ++ L RM
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 108 SQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD 167
+ + F TL+ + K G + + G + Y+ +I +Y + G D
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 168 QAVNAFRKMT-AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
A+ F T +E + ++ +LI F + +A +L M +N + PD +TY L
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 227 MKALIRVDKFHKVPAVYEEMVSSGC 251
+K L + + + + ++ +GC
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGC 444
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 102/249 (40%), Gaps = 2/249 (0%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATF-ERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
NG++ D Y +I + A + +R++ I PD+ ++++ C K D
Sbjct: 89 NGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFD 148
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A + GY+P + +++++ + Q+++ + +++ +G L
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLF 208
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPT-MYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
G N+A+ L+ L M P P +Y +L + +RG + +A F M +G
Sbjct: 209 KGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY 268
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ L+ + +D A + M E + D + TL+ +++ K
Sbjct: 269 YVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRV 328
Query: 242 VYEEMVSSG 250
++ +M+ G
Sbjct: 329 MFSQMIKKG 337
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 40/296 (13%)
Query: 1 MKSNGVQPDRHFYNVMI----DTFGKFNCLDHAMATFERMLS-EEIRPDTVTWNTLIDCH 55
MK++G +PD YN +I T K L+ ++M E +P+ VT+N L+
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 56 CKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
++G D+ LF+++ SP V T+N ++++ G ++ +LTRM+S P+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+TF L+D YGK F + + L KPT +N++I Y + + D+A F+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND-------------------- 215
M PS + +I +G A + + + E+D
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 216 ---------------LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ PD TY L KA + D +V + ++M G P+++
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y+ +I GK AM F M + RPD +N LI H D+A+ L
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT--RDKAKAL 188
Query: 68 FQEMQQKGY----------SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ +GY P V+TYNI++ + K DQV+ L + + P+ T
Sbjct: 189 ---EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F ++D YGK+G + L ++S KP +N LI++Y ++ ++ F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
KP+L NS+I +G+ R +A V + M + + P +TY ++
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 238 KVPAVYEEMVSS 249
+ ++EE+ S
Sbjct: 366 RAREIFEEVGES 377
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+SN +PD +NV+ID++GK + TF+ ++ + +P T+N++I + KA
Sbjct: 269 MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARM 328
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+AE +F++M Y P +TY MI G + ++ + + A T
Sbjct: 329 IDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNA 388
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++VY ++G + +A + + P + Y L AY + + +Q +KM +G
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 181 LKPSLLALNSLINAFG 196
+ P+ + FG
Sbjct: 449 IVPNKRFFLEALEVFG 464
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 66 ELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E+F+ MQ Q+ Y P Y+ +I+ MG + + L + M++ G P+A + L+
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 125 YGKSGRFNDALE----CLEVLKSMG-FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+ + ALE L+ +K + +P YN L+ A+AQ G DQ F+ +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P + N +++A+G++ E AVL M+ N+ +PD++T+ L+ + + +F K+
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 240 PAVYEEMVSSGCTP 253
++ ++ S P
Sbjct: 298 EQTFKSLMRSKEKP 311
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 40/296 (13%)
Query: 1 MKSNGVQPDRHFYNVMI----DTFGKFNCLDHAMATFERMLS-EEIRPDTVTWNTLIDCH 55
MK++G +PD YN +I T K L+ ++M E +P+ VT+N L+
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 56 CKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
++G D+ LF+++ SP V T+N ++++ G ++ +LTRM+S P+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+TF L+D YGK F + + L KPT +N++I Y + + D+A F+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND-------------------- 215
M PS + +I +G A + + + E+D
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 216 ---------------LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRK 256
+ PD TY L KA + D +V + ++M G P+++
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD Y+ +I GK AM F M + RPD +N LI H D+A+ L
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT--RDKAKAL 188
Query: 68 FQEMQQKGY----------SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ +GY P V+TYNI++ + K DQV+ L + + P+ T
Sbjct: 189 ---EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F ++D YGK+G + L ++S KP +N LI++Y ++ ++ F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
KP+L NS+I +G+ R +A V + M + + P +TY ++
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 238 KVPAVYEEMVSS 249
+ ++EE+ S
Sbjct: 366 RAREIFEEVGES 377
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+SN +PD +NV+ID++GK + TF+ ++ + +P T+N++I + KA
Sbjct: 269 MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARM 328
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+AE +F++M Y P +TY MI G + ++ + + A T
Sbjct: 329 IDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNA 388
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++VY ++G + +A + + P + Y L AY + + +Q +KM +G
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 181 LKPSLLALNSLINAFG 196
+ P+ + FG
Sbjct: 449 IVPNKRFFLEALEVFG 464
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 66 ELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E+F+ MQ Q+ Y P Y+ +I+ MG + + L + M++ G P+A + L+
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 125 YGKSGRFNDALE----CLEVLKSMG-FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+ + ALE L+ +K + +P YN L+ A+AQ G DQ F+ +
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
+ P + N +++A+G++ E AVL M+ N+ +PD++T+ L+ + + +F K+
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 240 PAVYEEMVSSGCTP 253
++ ++ S P
Sbjct: 298 EQTFKSLMRSKEKP 311
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M SN V P +N++++ + + L A +E M + ++P VT+ TLI+ +C+
Sbjct: 242 MDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR 300
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E+ +EM+ + +N +I+ +G + + ++ R P VT+ +
Sbjct: 301 VQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNS 360
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV + K+G A + L+++ + G PT T YN +++ +++ +N + K+ G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P L + ++ ED + A V + MK + PD++T T L+ L R++ +
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALR 266
++ V G P M+ + LR
Sbjct: 481 EEFDNAVRRGIIPQYITFKMIDNGLR 506
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 3/250 (1%)
Query: 15 VMIDTFGKFNCLDHAMATFERM---LSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
V++D K + A ER+ + P +N L++ ++ +AE+L++EM
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ P V+TY +I + ++L M+ + N + F ++D G++GR
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
++AL +E PT YN+L+ + + G A + M G+ P+ N
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
F + + E + + E PD +TY ++K L K V +EM + G
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 252 TPDRKARAML 261
PD ML
Sbjct: 457 DPDLLTTTML 466
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + GV P YN F K N + M + +++ PD +T++ ++ C+ G
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A ++ +EM+ +G P +LT ++I+ + E ++ + +G++P +TF
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF-KPTPTMYNALINA 159
+ + G + A ++ S+ K P Y ++A
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDA 540
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S + P + ++ + + D A+ F M D ++NT++D CK+
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++A ELF+ ++ + +S +TYN+++N ++ + ++L M +G+ PN T+ T
Sbjct: 177 VEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + ++G+ A E +K + Y +++ + G +A N F +M EG
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ PS+ N++I + A + + M +P+V TY L++ L +F +
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRY 267
+ + M + GC P+ + M+ +RY
Sbjct: 356 ELMQRMENEGCEPNFQTYNMM---IRY 379
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M +G D +N ++D K ++ A F R L DTVT+N +++ C
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKR 210
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A E+ +EM ++G +P + TYN M+ + + M+ + + VT+TT
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+V +G +G A + + G P+ YNA+I ++ + AV F +M G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 LKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+P++ N LI GE R E ++Q M+ +P+ TY +++ +
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEE---LMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
K ++E+M S C P+ +L S +
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ P+ YN M+ F + + HA F M + D VT+ T++ AG
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA +F EM ++G P V TYN MI + ++ + + M +G PN T+
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ +G F+ E ++ +++ G +P YN +I Y++ ++A+ F KM +
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 LKPSLLALNSLINAFGEDRRDPE 203
P+L N LI+ +R +
Sbjct: 401 CLPNLDTYNILISGMFVRKRSED 423
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D +++ ID + H L M+ P T+ I+ + K D+ L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
M G + +F T++DV KS R A E L+ F YN ++N +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
+ +A+ ++M G+ P+L N+++ F + A+ MK+ D + DVVTY
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
TT++ + + V++EM+ G P
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLP 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + D Y ++ FG + A F+ M+ E + P T+N +I CK
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +F+EM ++GY P V TYN++I + ++ + +L+ RM+++G PN T+
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
++ Y + AL E + S P YN LI+ R S+ V A
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVA 427
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +G+ PD + Y+ +I+ K + A+ F +ML + R + V ++++ C+C+ G
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +LF+E ++ S + YN+ +++G K ++ +L M +G+ P+ + +TT
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ G+ +DA + + + G P +YN L A GL+ +A + M G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 181 LKPSLLALNSLINAF---GEDRRDPEAFAVLQYM-KEND 215
+KP+ + N +I GE + + L++ +END
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 14/250 (5%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV+P++ Y +I + + N + A FE +++++I PD T+ +I+ +C+ +A
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
LF++M+++ P V+TY++++NS D D+ M++ ++P+ V +T +++
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINR 707
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y + +K P Y L+ +R LS R+M A +KP
Sbjct: 708 YCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS-------REMKAFDVKPD 760
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ LI+ + EA + M E+ + PD YT L+ ++ + +++
Sbjct: 761 VFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Query: 245 EMVSSGCTPD 254
M+ SG PD
Sbjct: 821 RMIESGVKPD 830
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 14/259 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD YNV+ A T + M + ++P VT N +I+ AG
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+AE ++ ++ K M+ A D + R++ LP +V FT
Sbjct: 517 LDKAEAFYESLEHKSRE----NDASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTL 570
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + + A + L+ + +G +P +MY LI A+ + +A F + +
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD------ 234
+ P L +IN + +A+A+ + MK D++PDVVTY+ L+ + +D
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME 690
Query: 235 KFHKVPAV--YEEMVSSGC 251
F +P V Y M++ C
Sbjct: 691 AFDVIPDVVYYTIMINRYC 709
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M++ V PD +Y +MI+ + N L A F+ M EI PD VT+ L+
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK------- 741
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ L +EM+ P V Y ++I+ + + +M G+ P+A +T
Sbjct: 742 NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G +A + + G KP Y ALI + G +AV ++M +G
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 181 LKPSLLALNSL 191
+KP+ +L+++
Sbjct: 862 IKPTKASLSAV 872
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 80/185 (43%)
Query: 46 VTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTR 105
+ + ++ C + AE + +M++ G P V Y+ +I + D+ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 106 MQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
M + N V ++++ Y + G F++A + + + YN +A + G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTT 225
++A+ FR+MT +G+ P ++ +LI + +AF ++ M PD+V Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 226 LMKAL 230
L L
Sbjct: 472 LAGGL 476
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 103/254 (40%), Gaps = 4/254 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ D H Y +++ + + + R+L E R V + I+ C D A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 65 EELFQEMQQKGY----SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
L Q ++ S + Y ++ + + + + ++ M+ G+ P+ ++
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ + K+ A++ + + + ++++ Y Q G +A + F++
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ + N +A G+ + EA + + M + PDV+ YTTL+ K
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 241 AVYEEMVSSGCTPD 254
+ EM +G TPD
Sbjct: 452 DLMIEMDGTGKTPD 465
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ Y V+++ + + L A + M+ ++PD V N +++ ++ A +L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F M+ KG P V +Y IMI Q + + M GL P+A +T L+ +G
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ + E L+ ++ G P YNALI A + + + + KM ++PS+
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N ++ ++ R AV M + + PD +YT L++ LI K + EEM+
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Query: 248 SSG 250
G
Sbjct: 536 DKG 538
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++D+ G+ A F++ L E P+ +T+ L++ C+ A ++ +M
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G P ++ +N+M+ + K L M+S+G PN ++T ++ + K
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A+E + + G +P +Y LI + + D ++M +G P N+LI
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ + M +N+++P + T+ +MK+ + AV++EM+ G P
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 254 DRKARAML----------RSALRYMRQTL 272
D + +L R A RY+ + L
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEML 535
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+++G++ TYN M++ + +++ + +L M ++GLL TFT + + +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A+ E++K FK N L+++ + L +A F K+ E P+++ L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVL 304
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+N + R EA + M ++ L+PD+V + +++ L+R K ++ M S G
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 252 TPDRKARAML 261
P+ ++ ++
Sbjct: 365 CPNVRSYTIM 374
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ Y V+++ + + L A + M+ ++PD V N +++ ++ A +L
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F M+ KG P V +Y IMI Q + + M GL P+A +T L+ +G
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
+ + E L+ ++ G P YNALI A + + + + KM ++PS+
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
N ++ ++ R AV M + + PD +YT L++ LI K + EEM+
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Query: 248 SSG 250
G
Sbjct: 535 DKG 537
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++D+ G+ A F++ L E P+ +T+ L++ C+ A ++ +M
Sbjct: 267 NCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G P ++ +N+M+ + K L M+S+G PN ++T ++ + K
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A+E + + G +P +Y LI + + D ++M +G P N+LI
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ + M +N+++P + T+ +MK+ + AV++EM+ G P
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 254 DRKARAML----------RSALRYMRQTL 272
D + +L R A RY+ + L
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEML 534
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+++G++ TYN M++ + +++ + +L M ++GLL TFT + + +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A+ E++K FK N L+++ + L +A F K+ E P+++ L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVL 303
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+N + R EA + M ++ L+PD+V + +++ L+R K ++ M S G
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 252 TPDRKARAML 261
P+ ++ ++
Sbjct: 364 CPNVRSYTIM 373
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 36 MLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK 95
M++ + PD VT + + C+ G D A++L +E+ +K P TYN ++ + +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 96 WDQVSDLLTRMQSQ-GLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
V + + M+ + P+ V+FT L+D S +A+ + L + GFKP +YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
++ + +AV ++KM EG++P + N+LI + R EA L+ M +
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 215 DLQPDVVTYTTLMKALIR 232
+PD TYT+LM + R
Sbjct: 330 GYEPDTATYTSLMNGMCR 347
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 5/251 (1%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEE--IRPDTVTWNTLIDCHCKA--GYHDRA 64
D F+N ++ ++G ++ + F+ +L + RP T+ L+ C+A
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ M G P +T +I + S+ + D+ DL+ + + P+ T+ L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 125 YGKSGRFNDALECLEVLKS-MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
K + E ++ ++ KP + LI+ +A+ K+ G KP
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
N+++ F + EA V + MKE ++PD +TY TL+ L + + +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 244 EEMVSSGCTPD 254
+ MV +G PD
Sbjct: 324 KTMVDAGYEPD 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 8 PDRHFYNVMIDTFGKFNCLD-HAMATFERMLSEE--IRPDTVTWNTLIDCHCKAGYHDRA 64
PD + YN ++ K C D H + F + ++ ++PD V++ LID C + A
Sbjct: 192 PDTYTYNFLLKHLCK--CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
L ++ G+ P YN ++ K + + +M+ +G+ P+ +T+ TL+
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
K+GR +A L+ + G++P Y +L+N ++G
Sbjct: 310 LSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G +PD YN ++ F + A+ +++M E + PD +T+NTLI KAG + A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSM 90
+ M GY P TY ++N M
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V+PD + ++ID L AM ++ + +PD +NT++ C A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++++M+++G P +TYN +I + + ++ L M G P+ T+T+L++
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 126 GKSG 129
+ G
Sbjct: 346 CRKG 349
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 4/248 (1%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+Q NV++D G+ L+ A + F+ +RP++V++N LI + A
Sbjct: 151 IQSLNTLINVLVDN-GE---LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAAC 206
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
++F EM + P V+TYN +I + + + LL M + + PNAVTF L+
Sbjct: 207 KVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGL 266
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
G +N+A + + ++ G KP Y L++ +RG D+A +M +KP +
Sbjct: 267 CCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDV 326
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ N L+N + R PEA+ VL M+ +P+ TY ++ R++ F V
Sbjct: 327 VIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNA 386
Query: 246 MVSSGCTP 253
M++S P
Sbjct: 387 MLASRHCP 394
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P+ +N++I F + A F+ ML E++P VT+N+LI C+ +A+
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
L ++M +K P +T+ +++ + + ++++ L+ M+ +G P V + L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
GK GR ++A L +K KP +YN L+N +A +M +G KP+
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+I+ F VL M + P T+ ++ LI+ V E
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEV 421
Query: 246 M 246
M
Sbjct: 422 M 422
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
+I +GK +D A+ F ++ S + + NTLI+ G ++A+ F +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
P +++NI+I + W+ + M + P+ VT+ +L+ ++ A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
LE + +P + L+ +G ++A M G KP L+ L++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
G+ R EA +L MK+ ++PDVV Y L+ L + + V EM GC P+
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 256 KARAML 261
M+
Sbjct: 362 ATYRMM 367
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ A LF + Q+ G+ +Y+ +I + +D V +L ++ + + F L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ YGK+G + A++ + S T N LIN G ++A + F L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 182 KPSLLALNSLINAFGEDRRDPEAFA-VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+P+ ++ N LI F D+ D EA V M E ++QP VVTY +L+ L R D K
Sbjct: 183 RPNSVSFNILIKGF-LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ E+M+ P+ +L L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGL 266
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC--------- 56
VQP YN +I + + + A + E M+ + IRP+ VT+ L+ C
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 57 --------------------------KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSM 90
K G D A+ L EM+++ P V+ YNI++N +
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 91 GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
+ + + +LT MQ +G PNA T+ ++D + + F+ L L + + PTP
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ ++ + G D A M + L
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G +P Y +++ GK +D A M I+PD V +N L++ C
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + EMQ KG P TY +MI+ E +D ++L M + P TF
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 121 LVDVYGKSGRFNDALECLEVL--KSMGF 146
+V K G + A LEV+ K++ F
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 105/239 (43%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
+ A++ F + R D ++++LI K+ D +++ + ++ + + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
I G D+ D+ ++ S + + TL++V +G A + K M
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
+P +N LI + + + A F +M ++PS++ NSLI + +A +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+L+ M + ++P+ VT+ LMK L ++++ + +M GC P +L S L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 123/261 (47%), Gaps = 4/261 (1%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P+ YN +++ + K +D A+ ++RM E +PD T+N LI+ +C++ D A +
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
LF+EM++KG P V+++N +I + K ++ + M G + T LVD
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+ GR +DA + L + P+ Y +L+ + +A+ ++ +G P +
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
A +L+ + R +A ++ M + PD VT+ L++ L D H A +
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSD--HSTDANRLRL 427
Query: 247 VSS--GCTPDRKARAMLRSAL 265
++S G PD +L S
Sbjct: 428 LASSKGYEPDETTYHVLVSGF 448
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 6/241 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G +P+ +N +I F ++ + M+ R T L+D C+ G
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L ++ K P Y ++ + + K + +++ + +G P + TT
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK---MT 177
LV+ KSGR A +E + + G P +N L+ SD + +A R +
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS---SDHSTDANRLRLLAS 430
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
++G +P + L++ F ++ R E ++ M + D+ PD+ TY LM L KF
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Query: 238 K 238
+
Sbjct: 491 R 491
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 48 WNTLIDCHCKAGYHDRAEELFQEMQQ-KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM 106
+ + ID +C+A D A F M++ P V YN ++N D+ RM
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 107 QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS 166
+ P+ TF L++ Y +S +F+ AL+ +K G +P +N LI + G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 167 DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
++ V +M G + S L++ + R +A ++ + + P Y +L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 227 MKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
++ L +K + + EE+ G TP A L LR +T K+
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIR-PDTVTWNTLIDCHCKAGYHDR 63
G+QP+ +N+++ K ++ A E M I P+++T++TL+DC
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 64 AEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A ELF++M K G SP +T+N+MIN + ++ +L M+ G PN ++ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ + K G+ +A + + +K G K Y L+N + + G +D+A+ +M A +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
L N ++ + R EA +L + + +Y ++ AL + K
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 243 YEEMVSSGCTP 253
M G P
Sbjct: 431 LSVMSERGIWP 441
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYS-PCVLTYNIMINSMGAQEKWDQV 99
++P+T +N L+ HCK G + A + +EM++ G S P +TY+ +++ + A + +
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 100 SDLLTRMQS-QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
+L M S +G+ P+ VTF +++ + ++G A + L+ +K G P Y+AL+N
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
+ + G +A F ++ GLK + +L+N F + EA +L MK + +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
D +TY +++ L + + + ++ S G ++ + ++ +AL
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 117/232 (50%), Gaps = 2/232 (0%)
Query: 1 MKSNGVQ-PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE-IRPDTVTWNTLIDCHCKA 58
MK +G+ P+ Y+ ++D + A+ FE M+S+E I PD VT+N +I+ C+A
Sbjct: 222 MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRA 281
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G +RA+++ M++ G +P V Y+ ++N K + ++ GL + V +
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
TTL++ + ++G ++A++ L +K+ + YN ++ + G S++A+ + +
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
EG+ + + ++NA + +A L M E + P T+ L+ L
Sbjct: 402 EGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK NG P+ + Y+ +++ F K + A TF+ + ++ DTV + TL++C C+ G
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +L EM+ LTYN+++ + ++ + ++ +L + S+G+ N ++
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++ +G A++ L V+ G P +N L+ + G ++ V G
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVL 208
L P + +++ + ++R+ F +L
Sbjct: 474 LIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 16/260 (6%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G + Y+V++D + A +M E R + L+ ++ HD+
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 65 EELFQEMQQ--------KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
E+F +Q S C+ N++I+S G ++ LL + GL PN
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCL---NLLIDS-GEVNLSRKL--LLYAKHNLGLQPNTC 197
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFK-PTPTMYNALINAYAQRGLSDQAVNAFRK 175
F LV + K+G N A +E +K G P Y+ L++ S +AV F
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 176 MTA-EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
M + EG+ P + N +IN F A +L +MK+N P+V Y+ LM +V
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 235 KFHKVPAVYEEMVSSGCTPD 254
K + ++E+ +G D
Sbjct: 318 KIQEAKQTFDEVKKTGLKLD 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
QQKG++ TY+++++++ +K+ V +L +M+ + F L+ + +S
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 132 NDALECLEVLKSMG-FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-----GLKPSL 185
+ +E +++ + KP+ + +N G VN RK+ GL+P+
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSG----EVNLSRKLLLYAKHNLGLQPNT 196
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQ-PDVVTYTTLMKALIRVDKFHKVPAVYE 244
N L+ ++ AF V++ MK + + P+ +TY+TLM L + + ++E
Sbjct: 197 CIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFE 256
Query: 245 EMVS-SGCTPD 254
+M+S G +PD
Sbjct: 257 DMISKEGISPD 267
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M ++G+ D + Y +++ N + + M + + P+ V +NTL+ CK G
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
RA L EM++ P +T+NI+I++ ++K Q LL + S G +P+ VT T
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+++V GR ++ALE LE ++S G K N L+ Y G A F +M +G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
P++ N LI + + A MK + ++ + T+ TL++ L
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 117/292 (40%), Gaps = 39/292 (13%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S G PD +++ + A+ ER+ S+ + D V NTL+ +C G
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+ F EM++KGY P V TYN++I D D M++ + N TF TL+
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 123 DVYGKSGRFNDALECLEVLKS----MGFKPTPTMYNALINAY------------------ 160
GR +D L+ LE+++ G + P YN +I +
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 161 ---------------AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
++G D A+ +M EG PS++ + LI+ + + + E+
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
++ M P T+ ++ + DK E+M GC PD ++
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTES 565
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 6/260 (2%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S G+ PD + +I FG+ + ++ + + I+P +N+++D K D
Sbjct: 105 SIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDI-D 163
Query: 63 RAEELF-QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A E F ++M G V TY I++ + + LL M++ G+ PNAV + TL
Sbjct: 164 IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ K+G+ A + +K +P +N LI+AY Q++ K + G
Sbjct: 224 LHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P ++ + ++ + R EA VL+ ++ + DVV TL+K + K
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 242 VYEEMVSSGCTPDRKARAML 261
+ EM G P+ + +L
Sbjct: 340 FFIEMERKGYLPNVETYNLL 359
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK++GV P+ YN ++ C + + ++SE P+ VT+N LI +C
Sbjct: 208 MKTSGVAPNAVVYNTLLHAL----CKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQK 263
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ L ++ G+ P V+T ++ + + + + ++L R++S+G + V T
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV Y G+ A ++ G+ P YN LI Y G+ D A++ F M +
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
++ + N+LI R + +L+ M+++D
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G P+ YN++I + LD A+ TF M ++ IR + T+NTLI G
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 61 HDRAEELFQEMQQKG--YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
D ++ + MQ + + YN +I + +W+ + L +M+ L P AV
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDR 461
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+ + + G +D + + G P+ + + LI+ Y+Q G ++++ M
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G P N++I F + + ++ M E PD +Y L++ L K
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 239 VPAVYEEMVSSGCTPD 254
++ MV PD
Sbjct: 582 AWLLFSRMVEKSIVPD 597
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
TY + + + ++D V LL M S GL P+ F T++ +G++ + +++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF-RKMTAEGLKPSLLALNSLINAFGEDR 199
+ G KP+ ++N++++ + + D A F RKM A G+ + L+
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
R + F +LQ MK + + P+ V Y TL+ AL + K + ++ EM
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G + H + ++D + ++ +D A F+ + E R D V+WN LI H + ++A
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL---ESRND-VSWNALIAGHARRSGTEKA 246
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
ELFQ M + G+ P +Y + + + +Q + M G A TL+D+
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y KSG +DA + + L K +N+L+ AYAQ G +AV F +M G++P+
Sbjct: 307 YAKSGSIHDARKIFDRLA----KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ S++ A E + + MK++ + P+ Y T++ L R ++ E
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 245 EM 246
EM
Sbjct: 423 EM 424
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++D + K + A F+R+ + D V+WN+L+ + + G+ A F+EM++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G P +++ ++ + D+ M+ G++P A + T+VD+ G++G N
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 134 ALECLEVLKSMGFKPTPTMYNALINA---YAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
AL +E M +PT ++ AL+NA + L A ++ + P ++
Sbjct: 417 ALRFIE---EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI---- 469
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPD 219
L N + R +A V + MKE+ ++ +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKE 498
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 108/277 (38%), Gaps = 35/277 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ + + DR FYN ++ F L +L R D V NTL++ + K G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 61 HDRAEELFQEMQQK-------------------------------GYSPCVLTYNIMINS 89
+ A ++F++M Q+ GYSP T + +I +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
A+ + L G N + L+D+Y + G +DA + L+S
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----N 226
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+NALI +A+R +++A+ F+ M +G +PS + SL A + V
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
YM ++ + TL+ + H +++ +
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
+N ++ + LD AM TF+ + + I PD VT+NT+I C+ G D +F+E+
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 72 QQKGYSPCVLTYNIMINSMGAQE---KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
++ G+ P ++++N ++ +E + D++ DL M+S+ L PN ++ + V ++
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRGLTRN 276
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
+F DAL ++V+K+ G P YNALI AY ++ + + +M +GL P +
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 189 NSLI 192
LI
Sbjct: 337 CMLI 340
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 20 FGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK-GYSP 78
+G +HA F+ M ++N L+ + + D A + F+E+ +K G +P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 79 CVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL 138
++TYN MI ++ + D + + ++ G P+ ++F TL++ + + F +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 139 EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGED 198
+++KS P YN+ + + A+N M EG+ P + N+LI A+ D
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 199 RRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
E MKE L PD VTY L+ L + + V EE +
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAV 116
+G + A +LF EM + V ++N ++++ +K D+ + + G+ P+ V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ T++ + G +D L E L+ GF+P +N L+ + +R L + + M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD-K 235
++ L P++ + NS + +++ +A ++ MK + PDV TY L+ A RVD
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY-RVDNN 313
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAML 261
+V Y EM G TPD ML
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCML 339
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ PD YN MI + +D ++ FE + PD +++NTL++ +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ ++ M+ K SP + +YN + + +K+ +L+ M+++G+ P+ T+ L+
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y + ++C +K G P Y LI ++G D+AV +++ E +K
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV----EVSEEAIKHK 363
Query: 185 LLA 187
LL+
Sbjct: 364 LLS 366
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 117 TFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+F L+ Y S + ++A++ E+ + +G P YN +I A ++G D ++ F +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+ G +P L++ N+L+ F E + MK +L P++ +Y + ++ L R K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
F + + M + G +PD L +A R
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ NG +PD +N +++ F + ++ M S+ + P+ ++N+ + +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L M+ +G SP V TYN +I + ++V M+ +GL P+ VT+
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
L+ + K G + A+E E P MY ++ G D+A
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 83 YNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK 142
Y+ I + +K+ + ++L + + + ++ +YG SG A + + +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 143 SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-GLKPSLLALNSLINAFGEDRRD 201
+ + T +NAL++AY D+A+ F+++ + G+ P L+ N++I A
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ ++ + +++N +PD++++ TL++ R + F + +++ M S +P+
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 38/293 (12%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
GV D Y+V++ G+ M + M+ E + PD +D + Y RA
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 65 EELFQEMQQKG------------------------------------YSPCVLTYNIMIN 88
ELF+E + G + C +YNIMI+
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSC--SYNIMIS 263
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ +++ +L M G P+ ++++ L++ G++GR ND++E + +K G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 149 TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL 208
+YNA+I + D+++ +R+M E +P+L + L++ + R+ +A +
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ M + P T+ +K L H +Y++ +GC A +L
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K + D YN+MI + K ++ + M+ PD ++++ LI+ + G
Sbjct: 247 KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRI 306
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ + E+F ++ KG P YN MI + + +D+ RM + PN T++ L
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
V K + +DALE E + S G PT + + + G A+ ++K G
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ S A L+ + V M+E+ DV Y ++ L +
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 242 VYEEMVSSGCTPDRKARAMLRSALRYMRQT 271
V EE + G P+R + L S L +T
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
+++ G + V +Y++++ ++G ++ + + D+L M +G+ P+ T +D + +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP-SLLALN 189
A+E E +S G K + +NAL+ +R A + F +G P + N
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYN 259
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
+I+ + + E VL+ M E+ PD ++Y+ L++ L R + + +++ +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 250 GCTPD 254
G PD
Sbjct: 320 GNVPD 324
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 14/229 (6%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ G+ + A+ATF RM +PD +NT+I+ C+ G +A L +MQ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 76 --YSPCVLTYNIMINSM-----------GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
Y P TY I+I+S + + + + + M +G +P+ VT+ L+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D K+ R ALE E +K+ G P YN+ I Y+ + A+ R M G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 183 -PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
P LI+A E RR EA ++ M E L P TY + AL
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIR--PDTVTWNTLIDCHCKA 58
MK +PD + YN +I+ + A ++M R PDT T+ LI +C+
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 59 GYHD-----------RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ 107
G A +F+EM +G+ P V+TYN +I+ + + +L M+
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 108 SQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFK-PTPTMYNALINAYAQRGLS 166
++G +PN VT+ + + Y + A+E + +K +G P + Y LI+A + +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 167 DQAVNAFRKMTAEGLKP 183
+A + +M GL P
Sbjct: 371 AEARDLVVEMVEAGLVP 387
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 8 PDRHFYNVMIDTFGKFN----C-------LDHAMATFERMLSEEIRPDTVTWNTLIDCHC 56
PD + Y ++I ++ ++ C + A F ML PD VT+N LID C
Sbjct: 235 PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGL-LPNA 115
K RA ELF++M+ KG P +TYN I + + +++ M+ G +P +
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS 354
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
T+T L+ ++ R +A + + + G P Y + +A + GL+ K
Sbjct: 355 STYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHK 414
Query: 176 MTAEGLK 182
EG++
Sbjct: 415 RMREGIQ 421
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 14/223 (6%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
T + L+ C + G+ A F M++ P V YN +IN++ + + LL
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 105 RMQSQGLL--PNAVTFTTLVDVYGKSG-----------RFNDALECLEVLKSMGFKPTPT 151
+MQ G P+ T+T L+ Y + G R +A + GF P
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 152 MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
YN LI+ + +A+ F M +G P+ + NS I + A +++ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 212 KE-NDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
K+ P TYT L+ AL+ + + + EMV +G P
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 96 WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNA 155
WD + + R + ++ A + T L+ G+ G +AL +K KP YN
Sbjct: 147 WDFLRQVSRRENGKNVVTTA-SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNT 205
Query: 156 LINAYAQRGLSDQAVNAFRKMTAEGLK--PSLLALNSLINAFGE-----------DRRDP 202
+INA + G +A +M G + P LI+++ RR
Sbjct: 206 IINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMW 265
Query: 203 EAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
EA + + M PDVVTY L+ + ++ + ++E+M + GC P++
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 38 SEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWD 97
++E D V ++ L+ + K G + +F+E+ G+S V+T N ++N + + +
Sbjct: 159 TDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 98 QVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
+ + M G+ PN TF L +V+ F + + LE ++ GF+P YN L+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
++Y +RG +A ++ M + P L+ SLI +D R EA M + ++
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
PD ++Y TL+ A + + + EM+ + PDR
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+++++ + K ++ F +L VT N L++ K + +++ M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G P T+NI+ N + +V D L +M+ +G P+ VT+ TLV Y + GR
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A +++ P Y +LI + G +A F +M G+KP ++ N+LI
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
A+ ++ ++ +L M N + PD T +++ +R
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 1/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G +PD YN ++ ++ + L A ++ M + PD VT+ +LI CK G
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + F M +G P ++YN +I + + Q LL M ++P+ T
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF-RKMTAE 179
+V+ + + GR A+ + L+ + + + LI + Q G A + R + E
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEE 441
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
G + N+LI + EA + +K + D TY L+ L R+ + +
Sbjct: 442 GHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREA 501
Query: 240 PAVYEEMVSSGCTPD 254
++ EM S PD
Sbjct: 502 ESLMAEMFDSEVKPD 516
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
I P+T T+N L + C ++ ++M+++G+ P ++TYN +++S + + +
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
L M + ++P+ VT+T+L+ K GR +A + + G KP YN LI AY
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+ G+ Q+ +M + P ++ F + R
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 108/289 (37%), Gaps = 41/289 (14%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V PD Y +I K + A TF RM+ I+PD +++NTLI +CK G +++
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 66 ELFQEMQQKGYSPCVLTYNIMIN-----------------------------------SM 90
+L EM P T +++ S+
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL 421
Query: 91 GAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
+ K LL R+ + +G T+ L++ + +AL LK+
Sbjct: 422 CQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGE--DRRDPEAFAV 207
Y ALI + G + +A + +M +KP +L+ + + D E
Sbjct: 482 AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLS 541
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVD-KFHKVPAVYEEMVSSGCTPDR 255
L M+ P+ +Y +L+KA+ + K + E M G P+R
Sbjct: 542 LFAMEFRIFDPE--SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNR 588
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 1/265 (0%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K G+ P Y++++ + + A F+ ML D + +N L+D CK+G
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D ++FQEM G P ++ I I++ +L RM+ L+PN TF +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ K+ + +DA L+ + G P YN+++ + ++A +M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD-KFHKVP 240
P N ++ R A + + M E P V TYT ++ L+R K +
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
+E M+ G P MLR+ L
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRL 464
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + G++PD + + + I + + A +RM ++ P+ T+N +I CK
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L EM QKG +P TYN ++ + ++ + LL+RM LP+ T+
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA-QRGLSDQAVNAFRKMTAE 179
++ + + GRF+ A E E + F PT Y +I+ ++G ++A F M E
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDE 448
Query: 180 GLKP 183
G+ P
Sbjct: 449 GIPP 452
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 101/249 (40%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+ ++ + + N A F RM+ I+P + L+ C + + A+E F + +
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G P TY+I++ + M + + + + + L+D KSG +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+ + + ++G KP + I+AY G A +M L P++ N +I
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCT 252
++ + +A+ +L M + PD TY ++M + ++ + M + C
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 253 PDRKARAML 261
PDR M+
Sbjct: 381 PDRHTYNMV 389
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK + P+ + +N +I T K +D A + M+ + PDT T+N+++ HC
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+RA +L M + P TYN+++ + ++D+ +++ M + P T+T
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 121 LVD-VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD 167
++ + K G+ +A E++ G P T L N G D
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 117 TFTTLVDVYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
++ LV++ G S +F + L E + F+ + ++ + AY++ L +A AF +
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
M G+KP + L+ L+++ + + A K + P TY+ L++ R+
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 236 FHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
V++EM+ C D A L AL
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDAL 253
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 79/312 (25%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++ + K LD A F RM D + WN+++ +C+ G H+ A EL +EM++
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS------------------------- 108
+G SP ++T+NI+I K D DL+ +M++
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 109 ----------QGLLPNAVTF-----------------------------------TTLVD 123
G++PNAVT +LVD
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K G+ DA + + +K+ K T +N++I Y Q G +A F +M L+P
Sbjct: 396 MYSKCGKLEDARKVFDSVKN---KDVYT-WNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+++ N++I+ + ++ + EA + Q M K+ +Q + T+ ++ I+ K + +
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 243 YEEMVSSGCTPD 254
+ +M S P+
Sbjct: 512 FRKMQFSRFMPN 523
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D + N+L+D + K G + A ++F ++ K V T+N MI + +L
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYCGKAYELF 441
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG-FKPTPTMYNALINAYAQ 162
TRMQ L PN +T+ T++ Y K+G +A++ + ++ G + +N +I Y Q
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLI----NAFGED----------RRDPEAFAVL 208
G D+A+ FRKM P+ + + SL+ N G RR+ +A +
Sbjct: 502 NGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV 561
Query: 209 Q------YMKENDLQ-----------PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+ Y K D++ D++T+ +L+ + + A++ +M + G
Sbjct: 562 KNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 252 TPDR 255
TP+R
Sbjct: 622 TPNR 625
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 47/270 (17%)
Query: 24 NCLDHAMATFERMLSEEI----RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPC 79
+C+D R+L PD L+ + K G A ++F M+++
Sbjct: 90 SCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERN---- 145
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF--------------------- 118
+ T++ MI + + +W +V+ L M G+LP+ F
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 119 --------------TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+++ VY K G + A + ++ + +N+++ AY Q G
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNG 261
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
++AV ++M EG+ P L+ N LI + + + A ++Q M+ + DV T+T
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ LI ++ ++ +M +G P+
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
M+ ++P+ +N MI + K AM F+RM + +++ +T TWN +I + + G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMI----NSMGAQEKWDQVSDLLTR-MQSQGLLPN 114
D A ELF++MQ + P +T ++ N +GA+ + +L R + + + N
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
A+T D Y KSG D + M K T +N+LI Y G A+ F
Sbjct: 564 ALT-----DTYAKSG---DIEYSRTIFLGMETKDIIT-WNSLIGGYVLHGSYGPALALFN 614
Query: 175 KMTAEGLKPSLLALNSLINAFG 196
+M +G+ P+ L+S+I A G
Sbjct: 615 QMKTQGITPNRGTLSSIILAHG 636
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N + DT+ K ++++ F M +++I +TWN+LI + G + A LF +M+
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDI----ITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVDVYGKSGRFN 132
+G +P T + +I + G D+ + + + ++P + +V +YG++ R
Sbjct: 619 QGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLE 678
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A L+ ++ M + ++ + + G D A++A + + L+P A S++
Sbjct: 679 EA---LQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS--LEPENTATESIV 733
Query: 193 N 193
+
Sbjct: 734 S 734
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 3/257 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G + + +N++I +F K + L A++ F RML + P+ V++N +ID CK G
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 61 HDRAEELFQEMQQKG---YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
A +L +M SP +TYN +IN + D + M G+ N T
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ LVD YG++G ++AL + + S G +YN+++ G + A++ R M
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
++ ++ ++ + EA + + E L D+V + TLM +R K
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 238 KVPAVYEEMVSSGCTPD 254
+ M+ G + D
Sbjct: 449 CADQILGSMLVQGLSLD 465
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 33/286 (11%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+ + YN ++ ++ AM+ M S+ ++ D T ++ C+ GY
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E +++ +K ++ +N +++ +K +L M QGL +A++F T
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA---VNA----- 172
L+D Y K G+ ALE + + M +YN+++N ++RG++ A VNA
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD 531
Query: 173 ---FRKMTAEGLKP----------------------SLLALNSLINAFGEDRRDPEAFAV 207
+ + E LK SL+ N +IN + +A V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
L++M E + PD +TY TL+ + + KV +++ ++ G TP
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERM---LSEEIRPDTVTWNTLIDCHCKAGYH 61
GV P+ +N+MID K + A+ +M + P+ VT+N++I+ CKAG
Sbjct: 248 GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D AE + +M + G TY ++++ G D+ L M S+GL+ N V + ++
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
V G A+ L + S + ++ + G +AV R+++ + L
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
++ N+L++ F D++ A +L M L D +++ TL+ ++ K +
Sbjct: 428 VEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALE 487
Query: 242 VYEEMV 247
+Y+ M+
Sbjct: 488 IYDGMI 493
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 49 NTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS 108
N + C DR ++++EM GY V T+N++I S + K + + RM
Sbjct: 187 NNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLK 246
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG---FKPTPTMYNALINAYAQRGL 165
G+ PN V+F ++D K+G AL+ L + M P YN++IN + + G
Sbjct: 247 CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR 306
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTT 225
D A M G+ + +L++A+G EA + M L + V Y +
Sbjct: 307 LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 226 LMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++ L +V +M S DR +A++ L
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 7/236 (2%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
++ G H N + N +D ++ M S + T+N +I CK
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKL 234
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWD-----QVSDLLTRMQSQGLLPNAV 116
A +F M + G P V+++N+MI+ GA + D Q+ + M + PNAV
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMID--GACKTGDMRFALQLLGKMGMMSGNFVSPNAV 292
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ ++++ + K+GR + A + G Y AL++AY + G SD+A+ +M
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
T++GL + + NS++ + A +VL+ M ++Q D T +++ L R
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
YN +++ K A A M EI+ D VT+NTL++ K G + A+++ +M
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAM---EIK-DIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 72 QQKG--YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
Q++ S ++T+NIMIN + +++ ++L M +G++P+++T+ TL+ + K
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+E + L G P +Y +++ R
Sbjct: 619 SQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 39/281 (13%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N V P+ YN +I+ F K LD A M+ + + T+ L+D + +AG
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L EM KG + YN ++ + + + +L M S+ + + T
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 121 LVDVYGKSGRFNDALE-------------------------------CL-EVLKSM---G 145
+V ++G +A+E C ++L SM G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+ LI+ Y + G ++A+ + M +L+ NS++N + A
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
AV+ M+ D+VTY TL+ ++ + + +M
Sbjct: 522 AVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
F +I +GK ++A FE M + + + +++N L+ + + D EELF E+
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL 170
Query: 72 QQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
K P +++YN +I ++ ++ + LL ++++GL P+ VTF TL+ G+
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
F E + YNA + A S + VN F ++ A GLKP + + N+
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
+I + + EA A + + ++ +PD T+ L+ A+ + F +++E S
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFS 348
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ- 109
+I + KAG + A+++F+EM + VL++N ++++ +K+D V +L + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 110 GLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
+ P+ V++ TL+ + +A+ L+ +++ G KP +N L+ + +G +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 170 VNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+ KM + + + N+ + + + E + +K + L+PDV ++ +++
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 230 LIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
I K + A Y+E+V G PD+ A+L A+
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAM 330
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 102/212 (48%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
++PD YN +I + + L A+A + + ++ ++PD VT+NTL+ G +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
EE++ +M +K + + TYN + + + K ++ +L +++ GL P+ +F ++
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
G+ ++A + + G++P + L+ A + G + A+ F++ ++
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
L L++ + + EA +++ K ND
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVKIAKTNDF 386
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
+ Y+ + + A ++ V ++L + + ++ +YGK+G F +A + E
Sbjct: 74 IAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFE 133
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-GLKPSLLALNSLINAFGED 198
+ + K + +NAL++AY D F ++ + +KP +++ N+LI A E
Sbjct: 134 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 199 RRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
PEA A+L ++ L+PD+VT+ TL+ + +F ++ +MV D
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 249
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K++G++PD +N MI +D A A ++ ++ RPD T+ L+ CKAG
Sbjct: 276 LKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGD 335
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL 112
+ A ELF+E K Y T +++ + K ++ +++ ++ L
Sbjct: 336 FESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
+S ++ DR + MI G+ + L+HA M + + D + LI+ + KAG
Sbjct: 142 RSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIV 201
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ ++FQ+M+ G + +YN + + + ++ +M S+G+ P T+ +
Sbjct: 202 QESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ + S R AL E +K+ G P +N +IN + + D+A F +M +
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
PS+++ ++I + R + + + M+ + ++P+ TY+TL+ L K +
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 242 VYEEMVSSGCTP 253
+ + M++ P
Sbjct: 382 ILKNMMAKHIAP 393
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GV+P RH YN+M+ F L+ A+ FE M + I PD T+NT+I+ C+
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D AE+LF EM+ P V++Y MI A ++ D + M+S G+ PNA T++T
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 121 LVDVYGKSGRFNDALECLEVLKSM 144
L+ +G+ +E +LK+M
Sbjct: 366 LLPGLCDAGKM---VEAKNILKNM 386
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 82 TYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
T+ MI +G K + +L M +G+ + F L++ YGK+G ++++ + +
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS-----------LLAL-- 188
K +G + T YN+L +RG A F KM +EG++P+ L+L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 189 ----------------------NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
N++IN F ++ EA + MK N + P VV+YTT+
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTM 331
Query: 227 MKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+K + VD+ ++EEM SSG P+
Sbjct: 332 IKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFE-------------------------- 34
M GV D + V+I+++GK + ++ F+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 35 ---------RMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
+M+SE + P T+N ++ + + A F++M+ +G SP T+N
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
MIN +K D+ L M+ + P+ V++TT++ Y R +D L E ++S G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+P T Y+ L+ G +A N + M A+ + P
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 45/298 (15%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK+ G+ PD +N MI+ F +F +D A F M +I P V++ T+I +
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLP--NAVTF 118
D +F+EM+ G P TY+ ++ + K + ++L M ++ + P N++
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 119 TTLVDV---------------------------YG-------KSGRFNDALECLEVLKSM 144
LV YG K+ +N A++ L+ L
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 145 --------GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFG 196
+ P+ YN +I G + +A FR++ G++ ALN+LI
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ-DALNNLIRGHA 519
Query: 197 EDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ ++ +L+ M + + Y L+K+ + + + MV G PD
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPD 577
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 7/268 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K +G + + ++++ F + + D A+ + M S P+T N ++D + K
Sbjct: 99 LKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNV 158
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMIN---SMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ A E+F+ ++ + + +++I ++ S G + V +L RM +G PN
Sbjct: 159 VNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRER 214
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F ++ + ++G ++A + + ++ G + +++ L++ + + G +AV+ F KM
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
G P+L+ SLI F + EAF VL ++ L PD+V ++ R+ +F
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 238 KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ V+ + PD+ A + S+L
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSL 362
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 3/232 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P+R + ++ + C+ A M+ I W+ L+ ++G
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE 262
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A +LF +M Q G SP ++TY +I D+ +L+++QS+GL P+ V
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y + GRF +A + L+ P + +++++ G D R G
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP---RITHGIG 379
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
L+ N L N F + + A VL M D D TYT + AL R
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P+ Y +I F +D A ++ SE + PD V N +I + + G + A
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++F ++++ P T+ +++S+ K+D V + G + VT L +
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLSNC 393
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ K G + AL+ L ++ F Y ++A + G A+ ++ + E
Sbjct: 394 FSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLD 453
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+++I++ E + A + + DVV+YT +K L+R + + ++
Sbjct: 454 AHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCC 513
Query: 245 EMVSSGCTPDRKARAMLRSALRYMRQTLK 273
+M G P+R+ + S L ++T K
Sbjct: 514 DMKEGGIYPNRRTYRTIISGLCKEKETEK 542
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 2/241 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLS-EEIRPDTVTWNTLIDCHCKAG 59
M G++P Y ++ + + N +D A + ++M S + +PD T++TL+ A
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTF 118
D + L++EM ++ +P +T NI+++ G ++DQ+ +L+ M S P+ T
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
++ V+G G+ + E ++ G +P +N LI +Y ++ + D+ + M
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+ N++I AF + M+ ++ D T+ L+ FHK
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
Query: 239 V 239
V
Sbjct: 390 V 390
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 6/254 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
QP Y ++ GK + A F+ ML E + P + L+ + ++ D A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 67 LFQEMQQKGYSPC---VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+ +M K + C V TY+ ++ + ++D V L M + + PN VT ++
Sbjct: 181 ILDKM--KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLS 238
Query: 124 VYGKSGRFNDALECL-EVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
YG+ GRF+ + L ++L S KP N +++ + G D + + K G++
Sbjct: 239 GYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIE 298
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P N LI ++G+ R + +V++YM++ + TY +++A V +
Sbjct: 299 PETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELT 358
Query: 243 YEEMVSSGCTPDRK 256
+++M S G D K
Sbjct: 359 FDQMRSEGMKADTK 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
++ + A+++W Q ++ ++ Q P T+ L+ + GKSG+ N A + + + G
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA-EGLKPSLLALNSLINAFGEDRRDPEA 204
+PT +Y AL+ AY + L D A + KM + +P + ++L+ A + +
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM-VSSGCTPD 254
++ + M E + P+ VT ++ RV +F ++ V +M VS+ C PD
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPD 265
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
+TVT TL D K + E +Q Y P TY ++ +G + ++ L
Sbjct: 89 NTVT-ETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM-GFKPTPTMYNALINAYAQ 162
M +GL P +T L+ Y +S +DA L+ +KS +P Y+ L+ A
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVV 221
D + +++M + P+ + N +++ +G R + VL M +PDV
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 222 TYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
T ++ + K + + YE+ + G P+ + +L
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNIL 307
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G D + +ID + K L A+ ++ML + ++ + V + ++ C+CK
Sbjct: 309 MEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDM 368
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A E F+E + + YN+ +++ + ++ +LL M+ +G++P+ + +TT
Sbjct: 369 CLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTT 428
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D Y G+ DAL+ ++ + G P YN L++ A+ G ++ + + +M AEG
Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Query: 181 LKPSLLALNSLINAFGEDRRDPEA 204
KP+ + + +I R+ EA
Sbjct: 489 PKPNAVTNSVIIEGLCFARKVKEA 512
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ PD Y +ID + + A+ + M+ + PD +T+N L+ + G+
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E+++ M+ +G P +T +++I + K + D + ++ Q N +F
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QKCPENKASF-- 530
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
V Y ++G A + L+ + ++Y L + G ++A + +KM+A
Sbjct: 531 -VKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P +I AF + EA + M E L PD+ TYT ++ R+++ K
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 241 AVYEEMVSSGCTPD 254
+++E+M G PD
Sbjct: 647 SLFEDMKQRGIKPD 660
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + V+P R MI F K N + A F+ M+ + PD T+ +I +C+
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMIN-------------SMGAQEKWDQVSDLLTRMQ 107
+AE LF++M+Q+G P V+TY ++++ S+ + + S++L
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS 701
Query: 108 SQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD 167
+ G+ + V +T L+D K A E + + G +P Y LI++Y ++G D
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Query: 168 QAVNAFRKMTAEGLKPS 184
AV +++ + PS
Sbjct: 762 MAVTLVTELSKKYNIPS 778
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 10 RHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQ 69
+ F+++ I+ + L+ A ++M + + P +I CK A+ LF
Sbjct: 561 KLFFSLCIEGY-----LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 70 EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY---- 125
M ++G P + TY IMI++ + + L M+ +G+ P+ VT+T L+D Y
Sbjct: 616 TMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 126 ----------GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
G+ G+ A E L + G Y LI+ + +QA F +
Sbjct: 676 PEHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDR 734
Query: 176 MTAEGLKPSLLALNSLINAF 195
M GL+P ++A +LI+++
Sbjct: 735 MIDSGLEPDMVAYTTLISSY 754
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
AE + EM++ G+ V +I+ + L +M +GL N V + ++
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K +ALE + + M YN +A ++ G ++A ++M G+ P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
++ +LI+ + + +A ++ M N + PD++TY L+ L R +V +Y
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIY 481
Query: 244 EEMVSSGCTPDRKARAMLRSALRYMRQT 271
E M + G P+ +++ L + R+
Sbjct: 482 ERMKAEGPKPNAVTNSVIIEGLCFARKV 509
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 125/341 (36%), Gaps = 78/341 (22%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG+ PD YNV++ + + + +ERM +E +P+ VT + +I+ C A
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 61 HDRAEELFQEMQQ----------KGYSPCVLT------------------YNIMINSMGA 92
AE+ F ++Q KGY L+ Y + S+
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 93 QEKWDQVSDLLTRMQS-----------------------------------QGLLPNAVT 117
+ ++ D+L +M + +GL+P+ T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY--------------AQR 163
+T ++ Y + A E +K G KP Y L++ Y +
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G +A R+ +A G+ ++ LI+ + +A + M ++ L+PD+V Y
Sbjct: 689 G-KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
TTL+ + R + E+ P A ++SA
Sbjct: 748 TTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSA 788
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 11/269 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFG-KFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAG 59
+K G+ + + Y +++ K N + AM E + T I+ C G
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIEN-------ESVFGYKTFINGLCVTG 259
Query: 60 YHDRAEELFQEMQQKGY---SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
++A L E+ + Y +++ + K ++ M+ G +
Sbjct: 260 ETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++D Y K+ +AL L+ + G K + + ++ Y + + +A+ F++
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
+ + N +A + R EAF +LQ MK+ + PDV+ YTTL+ K
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 237 HKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ +EM+ +G +PD +L S L
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGL 468
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G PDR Y MI F + L A + M+ + +RP+ +N +I H K G
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
E + EM + GY +L+ N MI + K D+ ++ M G+ PNA+T+
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
L+ + K + L+ + LK++G KP+ Y AL+
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%)
Query: 37 LSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKW 96
L + + P + LI C+ G + E+ M + P + Y +I + +K
Sbjct: 240 LKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQ 299
Query: 97 DQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL 156
+ + ++ +G P+ V +TT++ + + G A + + G +P YN +
Sbjct: 300 LEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVM 359
Query: 157 INAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
I+ + +RG + +M G ++L+ N++I F + EAF + + M E +
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Query: 217 QPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
P+ +TY L+K + +K K +Y+E+ + G P A A L L+
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLK 469
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 6/229 (2%)
Query: 5 GVQPDRHFYNVMIDTF---GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
G+ P ++ Y +I F G + C+ + T M++ P + +I C
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMSEVLHT---MIAWNHFPSMYIYQKIIKGLCMNKKQ 299
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A +F+ ++ KGY+P + Y MI + L M +G+ PN + +
Sbjct: 300 LEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVM 359
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ + K G + + G+ T N +I + G SD+A F+ M+ G+
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
P+ + N+LI F ++ + + + + +K L+P + Y L++ L
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 2/217 (0%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+P+ + C + G + A E++ ++ G S V+T N ++ K D+
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+L M ++ L+ G ++ E L+ G P +Y LI+ +
Sbjct: 201 ELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
+ G M A PS+ +I +++ EA+ + + +K+ PD
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
V YTT+++ ++ EM+ G P+ A
Sbjct: 319 VVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA 355
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQE 70
HF N ++ + K D A A FE+M ++ D V+WN L+ + +G+ A+ +F+E
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
M++K +L++ IMI+ + ++ L + M+ +G P F+ + G
Sbjct: 377 MKEKN----ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL--LAL 188
+ + + L +GF + + NALI YA+ G+ ++A FR M P L ++
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM------PCLDSVSW 486
Query: 189 NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
N+LI A G+ EA V + M + ++PD +T T++ A
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N +I + K ++ A F M D+V+WN LI + G+ A ++++EM +
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPC----LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS-QGLLPNAVTFTTLVDVYGKSGRFN 132
KG P +T ++ + DQ M++ + P A + L+D+ +SG+F+
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
DA V++S+ FKPT ++ AL++ G + + A K+ GL P
Sbjct: 572 DA---ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIP 617
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI-RPDTVTWNTLIDCHCKAGYHDR 63
G QP H N +ID + K + L++A R L +EI PD + T++ +C +G
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYA-----RQLFDEISEPDKIARTTMVSGYCASGDITL 98
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSM--GAQEKWDQVS--DLLTRMQSQGLLPNAVTFT 119
A +F++ +P + +M N+M G D S +L +M+ +G P+ TF
Sbjct: 99 ARGVFEK------APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 120 TLVDVYGKSGRFNDALECLE----VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
+++ G + +D +C++ LKS G ++ NAL++ Y++ S +++ RK
Sbjct: 153 SVLA--GLALVADDEKQCVQFHAAALKS-GAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+ E L+ + +++ + ++ +L+ M +N +V Y ++ +
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN---MKLVAYNAMISGYVNRGF 266
Query: 236 FHKVPAVYEEMVSSGCTPD 254
+ + + MVSSG D
Sbjct: 267 YQEALEMVRRMVSSGIELD 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++ + K + + ++ E + D +W T++ + K GY D EEL + M
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
+ ++ YN MI+ + + + +++ RM S G+ + T+ +++ +G
Sbjct: 248 ---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 134 ALECLE-VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+ VL+ F + N+L++ Y + G D+A F KM A+ L++ N+L+
Sbjct: 305 GKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALL 358
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+ + EA + + MKE ++ ++ + L
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 106/265 (40%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K+ G Q YN ++ A A RM+ + ++PD T+ L++ C AG
Sbjct: 174 KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM 233
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A+E EM ++G++P +++I + + +++++M G +P+ TF L
Sbjct: 234 KEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
++ KSG +E +G Y LI A ++ G D+A +G
Sbjct: 294 IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
KP +I + +AF+ MK P+ YT L+ R KF
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 242 VYEEMVSSGCTPDRKARAMLRSALR 266
EM G P + M+ L+
Sbjct: 414 YLVEMTEMGLVPISRCFDMVTDGLK 438
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++PD+ Y ++++ + + A + M P + LI+ AGY
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A+E+ +M + G+ P + T+NI+I ++ + + ++ GL + T+ T
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K G+ ++A L G KP P++Y +I + G+ D A + F M +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
P+ LI G + +A L M E L P
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 1/191 (0%)
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
Y+P + Y + S+ + +K++ + +L +M+ L + T +++ YGK+G + A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 136 ECLE-VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
E V K++G + T +YN+L++A + A R+M +GLKP L+N
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 195 FGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + EA L M P L++ L+ + +M G PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 255 RKARAMLRSAL 265
+ +L A+
Sbjct: 287 IQTFNILIEAI 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD +N++I+ K ++ + + + D T+ TLI K G
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A L + G+ P Y +I M +D + M+ + PN +T
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
L+ + G+ G+F DA L + MG P ++ + + G D A+
Sbjct: 398 LITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+ S G+ P+ Y ++ + ++ A E ML PD T+ L+D +CK G
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + +M++ P +TY +MI ++ ++K + ++ M + +P++
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++D + + ++A + P + + LI+ + G +A F + +G
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKG 395
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
PSLL N+LI E EA + M E +P+ TY L++ L + +
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALR 266
V EEM+ GC P++ +L L+
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQ 481
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 4 NGVQPDRHFYNVMID---TFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
N P + N+ ID +G + +M F R+ ++ + NTL++ +
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQR 170
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D +F+ ++ G +P + T N+++ ++ + + +L + S GL+PN VT+T
Sbjct: 171 FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYT 230
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
T++ Y G A LE + G+ P T Y L++ Y + G +A M
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN 290
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
++P+ + +I A ++++ EA + M E PD ++ AL K +
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
Query: 240 PAVYEEMVSSGCTPDRKARAMLRSALRYM 268
++ +M+ + C PD A+L + + ++
Sbjct: 351 CGLWRKMLKNNCMPD---NALLSTLIHWL 376
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
I P+ T N L+ CK + A ++ E+ G P ++TY ++ A+ +
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+L M +G P+A T+T L+D Y K GRF++A ++ ++ +P Y +I A
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
+ S +A N F +M P +I+A ED + EA + + M +N+ PD
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 221 VTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+TL+ L + + + +++E G P
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIP 398
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 1/235 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G PD Y V++D + K A + M EI P+ VT+ +I CK
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F EM ++ + P +I+++ K D+ L +M +P+ +T
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K GR +A + + + G P+ YN LI ++G +A + M
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
KP+ N LI ++ E VL+ M E P+ T+ L + L ++ K
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M PD +ID + + +D A + +ML PD +TLI CK G
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +LF E + KG P +LTYN +I M + + + L M + PNA T+
Sbjct: 382 VTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
L++ K+G + + LE + +G P T + L + G + A+
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N PD + +I K + A F+ I P +T+NTLI C+ G
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGE 415
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A L+ +M ++ P TYN++I + + +L M G PN TF
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 121 LVDVYGKSGRFNDALE 136
L + K G+ DA++
Sbjct: 476 LFEGLQKLGKEEDAMK 491
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ NG D + ++I +GK + + FE+M D +N +I C AG
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A E ++EM +KG + + TY ++++ + EK D V + M + F
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + SG+ +ALE + LK+ + L+ + A+ M
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L S + +I+ + +A + +K++ P V TYT +M+ L ++ +F K
Sbjct: 395 LDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGC 453
Query: 241 AVYEEMVSSGCTPDRKA 257
++ EM+ +G PD A
Sbjct: 454 NLFNEMIENGIEPDSVA 470
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 3/255 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTF--GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA 58
MK G+ P + +I K ++ A TF M+ PD + C C+
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEV 798
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
G A+ + + G+ P + Y+I I ++ K ++ L + + L + T+
Sbjct: 799 GNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTY 857
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
++V + G AL+ + +K +G KP +Y +LI + + ++ + +KM
Sbjct: 858 GSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEG 917
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
E +PS++ ++I + + EA+ + M+E PD TY+ + L + K
Sbjct: 918 ESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSED 977
Query: 239 VPAVYEEMVSSGCTP 253
+ EM+ G P
Sbjct: 978 ALKLLSEMLDKGIAP 992
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 7/260 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC-KAG 59
M+ G + + +MI +G+ + A+ TF+ M + P + T+ LI C K G
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 60 YH-DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL--PNAV 116
+ + A F+EM + G+ P ++ + +G + D + + S G + P V
Sbjct: 764 RNVEEATRTFREMIRSGFVP---DRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTV 820
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
++ + + G+ +AL L + Y ++++ QRG +A++ M
Sbjct: 821 AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
G KP + SLI F ++++ + Q M+ +P VVTYT ++ + + K
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 237 HKVPAVYEEMVSSGCTPDRK 256
+ + M G +PD K
Sbjct: 941 EEAWNAFRNMEERGTSPDFK 960
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +G + D YN+MI + D A+ ++ M+ + I T+ L+DC K+
Sbjct: 250 MRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEK 309
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D + + +M + + ++ S K + +L+ ++++ + +A F
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 121 LV---------------------------DVYGK--SG--RFND---ALECLEVLKSMGF 146
LV +VYG SG R ND ALE EV+K G
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
P + Y ++ + ++ N F +M G++P +A+ +++ R EA+
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWK 489
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
V M+E ++P +Y+ +K L R ++ ++ ++ +M +S
Sbjct: 490 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHAS 532
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
Q+ G+S V YN M++ G D V +L++ M+ G + T+T L+ VYGK+ +
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
L E ++ GF+ T YN +I + G D A+ +++M +G+ L L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 192 INAFGEDRR 200
++ + +
Sbjct: 301 LDCIAKSEK 309
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G +P H Y +I F K L+ + T ++M E P VT+ +I + G
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A F+ M+++G SP TY+ IN + K + LL+ M +G+ P+ + F T
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 121 LVDVYGKSGRFNDA 134
+ + G+ + A
Sbjct: 1000 VFYGLNREGKHDLA 1013
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
++ GY YN+ I G + + Q+ L M+ QG L T+ ++ YG++G
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS--DQAVNAFRKMTAEGLKPSLLALN 189
N A+ + +K MG P+ + + LI ++ ++A FR+M G P +
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+ E +A + L + + P V Y+ ++AL R+ K +
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEE 837
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 35/288 (12%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+ + PD +++I+ K N +D A+ ++ + P + +N +I+ CK G +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+ +L EM+ G P T N + + + + DLL +M+ G P T LV
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 123 DVYGKSGRFNDALECLEVLKSMGFK----------------------------------- 147
++GR DA + L+ + GF
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 148 PTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV 207
P Y+ LI A + + +A F +M ++GLKP++ NS+I+ + ++ +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
+ M E++ PDV+TYT+L+ L + + + EM C P+R
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%)
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
DR ELF+++ G+ P V+ Y+++I ++ + + L M S+GL P T+ ++
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+D + K G + L C+ + P Y +LI+ G +A+ + +M +
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+ + +LI + EA + M+E +++PD Y +L+ + + + +
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 242 VYEEMVSSGCTP 253
++ EMV G P
Sbjct: 776 IFREMVHKGRFP 787
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%)
Query: 17 IDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGY 76
ID K +D + F + + PD + ++ LI CKA A+ LF EM KG
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 77 SPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALE 136
P V TYN MI+ + + D+ + RM P+ +T+T+L+ SGR ++A+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 137 CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+K P + ALI + G S +A+ FR+M + ++P
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK GV+P + N + + A+ ++M P L+ C+ G
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR 559
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + ++ +G+ ++ I+ + E D+ +L + + G P+ + +
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K+ R +A + S G KPT YN++I+ + + G D+ ++ +M +
Sbjct: 620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE 679
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P ++ SLI+ R EA MK D P+ +T+ L++ L + +
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 241 AVYEEMVSSGCTPD 254
+ EM PD
Sbjct: 740 VYFREMEEKEMEPD 753
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 7/204 (3%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+NG PD Y+V+I K A F M+S+ ++P T+N++ID CK G D
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
R M + +P V+TY +I+ + A + + M+ + PN +TF L+
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
K G +AL ++ +P +Y +L++++ + FR+M +G
Sbjct: 727 QGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Query: 183 PS------LLALNSLINAFGEDRR 200
P +LA+N + + F ED R
Sbjct: 787 PVSVDRNYMLAVN-VTSKFVEDLR 809
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 109/244 (44%), Gaps = 5/244 (2%)
Query: 8 PDRHFYNVMIDTFGKFNC--LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
P+ + YN +++ K N ++ A + M D T ++ +C G +RA
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+F E+ +G+ ++ I++ S + D+ +L+ ++ + + N T+ L+ +
Sbjct: 235 SVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGF 293
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
K R + A + E ++ MG +Y+ LI + + A++ + ++ G+ P
Sbjct: 294 VKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR 353
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
L L+ +F E+ V+ + + D + ++ Y +L + IR D H+ + +
Sbjct: 354 GILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411
Query: 246 MVSS 249
++ +
Sbjct: 412 LMGN 415
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 16/290 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDH-------------AMATFERMLSEEIRPDTVT 47
+K +G+ PDR ++ +F + + L M ++ + IR D V
Sbjct: 344 IKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVH 403
Query: 48 WNTLIDCHCKAGYH-DRAEELFQEMQ--QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
+ Y D E+ + ++ K P + +I+IN + K D LL
Sbjct: 404 EAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH 463
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+ GL+P + + +++ K GR ++L+ L +K G +P+ N + A+R
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC 523
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
A++ +KM G +P + L+ E+ R +A L + +V T
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
+ LI+ + + ++ ++ ++G PD A +L AL +T+++
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ D Y+V+I K L+ A++ + + I PD L+ +
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 61 HDRAEE-LFQEMQQK-----------GYSPCVLT---YNIMINSMGAQEKWDQVSDL--L 103
R E + ++ +K G+ L Y+ + N MG E D VS++ L
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYES-DGVSEIVKL 427
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+ ++ +LP++ + + +++ K+ + + A+ L + G P P MYN +I +
Sbjct: 428 LKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKE 487
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G S++++ +M G++PS LN + E A +L+ M+ +P +
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 224 TTLMKAL 230
T L+K L
Sbjct: 548 TFLVKKL 554
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/265 (16%), Positives = 109/265 (41%), Gaps = 20/265 (7%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
D H +++ +F K+ +D A E + +IR + T+ LI K D+A +LF
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
++M++ G + + Y+++I + + + L ++ G+ P+ L+ + +
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA---------- 178
+ E ++ + K +Y +L + + L +A + + +
Sbjct: 367 SELSRITEV--IIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEI 424
Query: 179 --------EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ + P +L+ +IN + + A +L + +N L P + Y +++ +
Sbjct: 425 VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 231 IRVDKFHKVPAVYEEMVSSGCTPDR 255
+ + + + EM +G P +
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQ 509
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIR---PDTVTWNTLIDCHCKAGYHDRA 64
PD Y ++ + K + E M ++ R PD VT+ T++ AG DRA
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVD 123
++ EM + G +TYN+++ Q + D+ DLL M + G+ P+ V++ ++D
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG-LK 182
AL +++ G PT Y L+ A+A G A F +M + +K
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
L+A N L+ + +A V+ MKEN P+V TY +L + + K +
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 243 YEEM 246
++E+
Sbjct: 652 WKEI 655
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 119/301 (39%), Gaps = 42/301 (13%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD YNVMI + + + ER++ + I+ T ++L+ + G AE
Sbjct: 268 EPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327
Query: 67 LFQEMQQKGYSPCVL--------------------TYNIMINSMGAQEKWDQVSDLLTRM 106
+ Q M++K C + + D+VS+
Sbjct: 328 IVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVD 387
Query: 107 QSQGLLPNAV------------------TFTTLVDVYGKSGRFNDALECLEVLKSMGFK- 147
+ LLPN+V +TTL+ Y K+GR D LE ++ +
Sbjct: 388 VFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRN 447
Query: 148 --PTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P Y +++A+ GL D+A +M G+ + + N L+ + + + A
Sbjct: 448 SHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAE 507
Query: 206 AVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA 264
+L+ M E+ ++PDVV+Y ++ I +D A + EM + G P + + L A
Sbjct: 508 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Query: 265 L 265
Sbjct: 568 F 568
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 31/211 (14%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAG 59
M++ G+ P + Y ++ F A F+ M+++ ++ D + WN L++ +C+ G
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK-------WDQVSDLLTRMQSQG-- 110
+ A+ + M++ G+ P V TY + N + K W ++ + + +
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPS 668
Query: 111 ----------LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNAL---- 156
L P+ TL D+ ++ F ALE + ++ G P T Y +
Sbjct: 669 DSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEM 728
Query: 157 -----INAYAQRGLSDQAVNAFRKMTAEGLK 182
+ +A + D+ V RK AE K
Sbjct: 729 HSRMFTSKHASQARIDRRVE--RKRAAEAFK 757
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 113 PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
P+ VT+TT+V + +G + A + L + MG YN L+ Y ++ D+A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 173 FRKMTAE-GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
R+MT + G++P +++ N +I+ A A M+ + P ++YTTLMKA
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 232 RVDKFHKVPAVYEEMVS 248
+ V++EM++
Sbjct: 570 MSGQPKLANRVFDEMMN 586
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 41/255 (16%)
Query: 42 RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
RPDT +N +++ G D+ +LF+EM + P VLTYN+MI + + +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS------------------ 143
+L R+ +G+ T +LV Y G A ++ ++
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 144 -----MGFKPTPTMYNALINAYAQRG-LSDQA-VNAFRKMTAEGLKPS--------LLAL 188
+ + Y+ R +S++ V+ F+K+ + PS + A
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAP 412
Query: 189 NS-----LINAFGEDRRDPEAFAVLQYMKEND---LQPDVVTYTTLMKALIRVDKFHKVP 240
+S L+ + ++ R + +L+ M+ D PD VTYTT++ A + +
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 241 AVYEEMVSSGCTPDR 255
V EM G +R
Sbjct: 473 QVLAEMARMGVPANR 487
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTF---GKFNCLDHAM-ATFERMLSEEIRPDTVTWNTLIDCHC 56
M G PDR Y +++ F GK H + + F R+ + D V + L+D C
Sbjct: 178 MNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALC 237
Query: 57 KAGYHDRAEELFQEMQQKGY-SPCVLTYNIMINSM-GAQEKWDQVSDLLTRMQSQGLLPN 114
AG D A E+ ++ +KG +P ++I + E ++V LLT +G +P
Sbjct: 238 DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
+++ + + G+ + E L ++S GF+PTP +Y A + A + G +AV+
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 175 KMTAEG-LKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIR 232
K +G P++ N LI +D + EA L+ M K+ + TY TL+ L R
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+F + V EEM+ P + M+ L
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 33/268 (12%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSE---------------------EIRPDTVTWNTLIDC 54
+ + +FNC++ ++ +F+ +L E E+ N L+
Sbjct: 103 LFKSLHEFNCVNWSL-SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKV 161
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL----TRMQSQG 110
C+ D A ++FQEM +G P +Y I++ + K ++ + LL R+ +G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
+ V + L+D +G +DA+E L + G K Y+ + + + S + +
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES--SSEGI 279
Query: 171 NAFRKMTAE----GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+++ E G P L + +++ E+ + E VL M+ +P Y
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 227 MKALIRVDKFHK-VPAVYEEMVSSGCTP 253
+KAL R K + V + +EM+ C P
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLP 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N + T++D+ GKS R + +E +K + +++ ++I +++ G + A++ F
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL-QYMKENDLQPDVVTYTTLMKALIR 232
+ + L+ ++L+ ++ A + +Y ++ + LMK L +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAML 261
V++ V++EM GC PDR + +L
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRIL 193
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTF---GKFNCLDHAM-ATFERMLSEEIRPDTVTWNTLIDCHC 56
M G PDR Y +++ F GK H + + F R+ + D V + L+D C
Sbjct: 178 MNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALC 237
Query: 57 KAGYHDRAEELFQEMQQKGY-SPCVLTYNIMINSM-GAQEKWDQVSDLLTRMQSQGLLPN 114
AG D A E+ ++ +KG +P ++I + E ++V LLT +G +P
Sbjct: 238 DAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
+++ + + G+ + E L ++S GF+PTP +Y A + A + G +AV+
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 175 KMTAEG-LKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIR 232
K +G P++ N LI +D + EA L+ M K+ + TY TL+ L R
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+F + V EEM+ P + M+ L
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 33/268 (12%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSE---------------------EIRPDTVTWNTLIDC 54
+ + +FNC++ ++ +F+ +L E E+ N L+
Sbjct: 103 LFKSLHEFNCVNWSL-SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKV 161
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL----TRMQSQG 110
C+ D A ++FQEM +G P +Y I++ + K ++ + LL R+ +G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 111 LLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAV 170
+ V + L+D +G +DA+E L + G K Y+ + + + S + +
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES--SSEGI 279
Query: 171 NAFRKMTAE----GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+++ E G P L + +++ E+ + E VL M+ +P Y
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 227 MKALIRVDKFHK-VPAVYEEMVSSGCTP 253
+KAL R K + V + +EM+ C P
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLP 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N + T++D+ GKS R + +E +K + +++ ++I +++ G + A++ F
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL-QYMKENDLQPDVVTYTTLMKALIR 232
+ + L+ ++L+ ++ A + +Y ++ + LMK L +
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 233 VDKFHKVPAVYEEMVSSGCTPDRKARAML 261
V++ V++EM GC PDR + +L
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRIL 193
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ- 109
+I+ + + G + A+++F EM ++ L++N ++N+ +K+D V + + +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 110 GLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
+ P+ ++ TL+ G F +A+ ++ +++ G KP +N L++ +G ++
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 170 VNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+ +M + +K + + N+ + + + E ++ +K N+L+PDV T+T ++K
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 230 LIRVDKFHKVPAVYEEMVSSGCTP 253
+ K + Y+E+ +GC P
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRP 315
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 102/210 (48%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++PD YN +I A+A + + ++ ++PD +T+N L+ G + E
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+++ M +K + +YN + + + K +++ L +++ L P+ TFT ++ +
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
G+ ++A+ + ++ G +P ++N+L+ A + G + A +++ A+ L
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKEND 215
L +++A + + EA +++ K ND
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVELAKTND 382
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
I PD ++NTLI C G A L E++ KG P +T+NI+++ + K+++
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+ RM + + + ++ + + + + + LK KP + A+I +
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
G D+A+ ++++ G +P NSL+ A + A+ + + + L D
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 221 VTYTTLMKALIRVDKFHKVPAVYE 244
++ AL++ K + + E
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVE 376
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT---FTTL 121
E+ + Q + + + Y + + A +K++ V ++L + Q PN +
Sbjct: 56 EKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEIL---EEQNKYPNMSKEGFVARI 112
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE-G 180
+++YG+ G F +A + + + K T +NAL+NA D F+++ +
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++P + + N+LI EA A++ ++ L+PD +T+ L+ KF +
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 241 AVYEEMVSSGCTPD 254
++ MV D
Sbjct: 233 QIWARMVEKNVKRD 246
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 64/143 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M V+ D YN + N + ++ F+++ E++PD T+ +I G
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++E+++ G P +N ++ ++ + +L + ++ LL +
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 357
Query: 121 LVDVYGKSGRFNDALECLEVLKS 143
+VD K + ++A E +E+ K+
Sbjct: 358 VVDALVKGSKQDEAEEIVELAKT 380
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 17/269 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS GV P+ H ++ +I ++ A FE ML+ P++ +N L+ +A
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMI------------NSMGAQEKWDQVSDLLTRMQS 108
+DRA LFQ + + + +I+ N G+ + S + +
Sbjct: 460 YDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKR 519
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQ 168
P T+ L+ G + E ++ +KS+G P ++ LI+ G +
Sbjct: 520 FCFKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 169 AVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMK 228
AV R M + G +P ++A + I E++ AF++ + M+ ++P+ VTY TL+K
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Query: 229 ALIRVDKFHKVP---AVYEEMVSSGCTPD 254
A + +V A+Y++M ++G P+
Sbjct: 638 ARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMA--TFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
P+ + MID G C D+ + +E +L E I+P+ N+L++ + HD
Sbjct: 265 PNMYICRTMIDVCGL--CGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNS----HDLGY 318
Query: 66 EL--FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT---RMQSQGLLP-NAVTFT 119
L ++ MQ + + +YNI++ + + D D+ RM+S GLL +A T+
Sbjct: 319 TLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYC 378
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
T++ V+ + + AL+ + +KS+G P +++LI+A A GL +QA + F +M A
Sbjct: 379 TIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS 438
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
G +P+ N L++A E + AF + Q K
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWK 471
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 115/271 (42%), Gaps = 21/271 (7%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K N ++P+ + N +++ + L + + ++ M ++ D ++N L+ C AG
Sbjct: 294 LKEN-IKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGR 350
Query: 61 HDRAEELFQEMQQKGYSPCV----LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
D A+++++E ++ S + TY +I + W + M+S G+ PN
Sbjct: 351 VDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTH 410
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+++L+ +G A E + + G +P +N L++A + D+A F+
Sbjct: 411 TWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSW 470
Query: 177 TAEGLKPSLLALNSLI------------NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
+ SL A + + N G +Q K +P TY
Sbjct: 471 KGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYN 530
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPDR 255
L+KA +++ + +EM S G +P++
Sbjct: 531 ILLKAC--GTDYYRGKELMDEMKSLGLSPNQ 559
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
+ ++ + + CL+ + M S I + V+WN ++ ++GYH A +FQ++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
G+ P +T + ++ S+G E + + + QGLL + + ++D+YGKSG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
+ + M + NA I ++ GL D+A+ F + ++ ++++ S+I
Sbjct: 306 IISLFNQFEMM----EAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
++ +D EA + + M+ ++P+ VT +++ A
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 19/241 (7%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N I + +D A+ FE + + + V+W ++I + G A ELF+EMQ
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 74 KGYSPCVLTYNIMINSMG---AQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
G P +T M+ + G A R+ LL N + L+D+Y K GR
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH---LLDNVHVGSALIDMYAKCGR 438
Query: 131 FNDALECLEVLKSMGFKPTPT----MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
N L + F PT +N+L+N ++ G + + ++ F + LKP +
Sbjct: 439 IN--------LSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ SL++A G+ E + + M E ++P + Y+ ++ L R K + + +E
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 246 M 246
M
Sbjct: 551 M 551
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N +++ F M+ FE ++ ++PD +++ +L+ + G D + F+ M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 73 QK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
++ G P + Y+ M+N +G K + DL+ M + P++ + L++ S R
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLN----SCRL 569
Query: 132 NDALECLEVL--KSMGFKP-TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS---- 184
+ ++ E+ K +P P Y L N YA +G+ + + KM + GLK +
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 185 -LLALNSLINAFGEDRRDPEAFAVLQYMKE 213
+ N + D+ P+ + + M E
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ GV+P+ M+ G L H +T + + + + LID + K G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ++ +F M K ++ +N ++N K +V + + L P+ ++FT+
Sbjct: 439 INLSQIVFNMMPTKN----LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 121 LVDVYGKSGRFNDALECLEVL-KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ G+ G ++ + +++ + G KP Y+ ++N + G +A + ++M E
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE 554
Query: 180 GLKPSLLALNSLINA 194
P +L+N+
Sbjct: 555 ---PDSCVWGALLNS 566
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
S + P+ Y ++ + +D R+ E D V ++ I + K G
Sbjct: 200 SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALV 259
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A +EM +KG + V++Y+I+I+ + + ++ LL +M +G+ PN +T+T ++
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
K G+ +A + S+G + +Y LI+ ++G ++A + M G++
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
PS+L N++IN R EA V + DV+TY+TL+ + I+V V +
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
D + + +I+ CK G+ +A L + +G + +TYN +IN + Q + L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
+++ GL+P+ VT+ L+D K G F DA + L+ + S G P +YN++++ Y +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G ++ A+ + + P ++S+I + + EA +V K+ ++ D +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSS 249
L+K + + + EM+ S
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y ++I+ K L A+ S + +T+T+N+LI+ C+ G A LF ++
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
G P +TY I+I+++ + + LL M S+GL+PN + + ++VD Y K G+
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 133 DALECLEVLKSMGFKPTPTMY--NALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
DA+ V + M + TP + +++I Y ++G ++A++ F + + +
Sbjct: 778 DAMRV--VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 191 LINAFGEDRRDPEAFAVLQYM 211
LI F R EA +L+ M
Sbjct: 836 LIKGFCTKGRMEEARGLLREM 856
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRP--DTVTWNTLIDCHCKA 58
++++G P + +I F + +D+A+ E M ++ + D + +I CK
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 59 GYHDRAEELFQEMQQKG-YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
G + A F+ G P ++TY +++++ K D+V DL+ R++ +G + V
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
++ + Y K G DAL + G Y+ LI+ ++ G ++A+ KM
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
EG++P+L+ ++I + + EAF + + ++ D Y TL+ + R +
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 238 KVPAVYEEMVSSGCTP 253
+ ++ +M G P
Sbjct: 365 RAFSMLGDMEQRGIQP 380
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 5/261 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++ G + D FY+ I + K L A+ M+ + + D V+++ LID K G
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A L +M ++G P ++TY +I + K ++ L R+ S G+ + + T
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D + G N A L ++ G +P+ YN +IN G +A ++G
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKG 407
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ ++ ++L++++ + + + + E + D+V L+KA + + + +
Sbjct: 408 VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEAD 467
Query: 241 AVYEEMVSSGCTPDRKARAML 261
A+Y M TPD A +
Sbjct: 468 ALYRAMPEMDLTPDTATYATM 488
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
KS GV + YN +I+ + CL A+ F+ + + + P VT+ LID CK G
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLF 741
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
AE+L M KG P ++ YN +++ + + +++R + P+A T +++
Sbjct: 742 LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
+ Y K G +AL K + LI + +G ++A R+M
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG--YSPCVLTYNIMINSMGAQEKWDQVS 100
P ++T+ +LI + G D A E+ + M K Y + +I+ K +
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 101 DLLTRMQSQGLL-PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
G+L PN VT+TTLV + G+ ++ + + L+ GF+ Y+ I+
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 160 YAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
Y + G A+ R+M +G+ +++ + LI+ ++ EA +L M + ++P+
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 220 VVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++TYT +++ L ++ K + ++ ++S G D
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 346
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 80 VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE 139
V+ Y I+IN + + + +L + +S+G+ N +T+ +L++ + G +AL +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 140 VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDR 199
L+++G P+ Y LI+ + GL A M ++GL P+++ NS+++ + +
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 200 RDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE-------------- 245
+ +A V+ + PD T ++++K + + +V+ E
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 246 -MVSSGCTPDR--KARAMLRSAL 265
++ CT R +AR +LR L
Sbjct: 835 FLIKGFCTKGRMEEARGLLREML 857
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+QP YN +I+ C+ ++ + + S+ + D +T++TL+D + K
Sbjct: 373 MEQRGIQPSILTYNTVINGL----CMAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQN 427
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D E+ + + ++ NI++ + + + L M L P+ T+ T
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ Y K+G+ +ALE L+ YN +I+A ++G+ D A ++ +G
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
L + +L+++ + D ++ +++ L DV
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ--LNSDV 584
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Query: 56 CKAGYHDRAEELFQEMQQKGYS---PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL 112
CK G + A E++ M++KG + P + ++ N V+ T + S
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM--- 653
Query: 113 PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNA 172
+ + +T +++ K G AL KS G YN+LIN Q+G +A+
Sbjct: 654 -DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 173 FRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
F + GL PS + LI+ ++ +A +L M L P+++ Y +++ +
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 233 VDKFHKVPAVYEEMVSSGCTPD 254
+ + V + TPD
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPD 794
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G+ P+ YN ++D + K + AM R + + PD T +++I +CK G
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGD 810
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM 106
+ A +F E + K S + +I + + ++ LL M
Sbjct: 811 MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
+N+++ + K +++M +E + D +++ +D CK+G +A +L++EM
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ + V+ YN +I ++GA + + + M+ +G PN T T++ + + GR
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
DA L+ + G +P Y L + + + ++ F +M G++P + L
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCLFSRLEK---PSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+ F V + MKE+ PD Y ++ ALI+ EEM+ G
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Query: 252 TPDRKARAMLRS 263
+P R+ + +S
Sbjct: 428 SPRRRPELVEKS 439
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
P+ + ++ + + + A+ ++++ +R +T +N L+D C+ + AEEL
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEEL 173
Query: 68 F--QEMQQKGYSPC-VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ + G+S +N+++ W + + +M ++G+ + +++ +D+
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
KSG+ A++ + +KS K YN +I A + + FR+M G +P+
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ N++I ED R +A+ +L M + QPD +TY L R++K ++ +++
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS---RLEKPSEILSLFG 350
Query: 245 EMVSSGCTPDRKARAML 261
M+ SG P ML
Sbjct: 351 RMIRSGVRPKMDTYVML 367
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS ++ D YN +I G ++ + F M P+ T NT+I C+ G
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A + EM ++G P +TY + + + EK ++ L RM G+ P T+
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVM 366
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G L + +K G P YNA+I+A Q+G+ D A +M G
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 181 LKP 183
L P
Sbjct: 427 LSP 429
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
+++ F K A+ +E + EE VT+ I+ +C+ +++AE LF EM +KG
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ CV+ Y+ +++ G + L+ +M+ +G PN + +L+D++G++ A
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF 195
+ + +K P Y ++I+AY + ++ V +++ K ++ F
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVF 538
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ R E +LQ MK + D Y++ + AL
Sbjct: 539 SKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 88/186 (47%)
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
+TY I IN+ EK+++ L M +G V ++ ++D+YGK+ R +DA+ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+K G KP +YN+LI+ + + +A +++M + P ++ S+I+A+ +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 201 DPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAM 260
+ Q + N + D ++ + + ++ + ++M G D + +
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 261 LRSALR 266
+ALR
Sbjct: 569 ALNALR 574
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/302 (17%), Positives = 115/302 (38%), Gaps = 39/302 (12%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI----RPDTVTWNTLIDCHCK 57
+S GV+P Y +++ K + F+ S+ + + + + K
Sbjct: 201 QSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAK 260
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+G A E+ +EM+ KG Y+++I + + L + LL +
Sbjct: 261 SGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEM 320
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM------------------------- 152
+V +Y + G LE + ++ K T +
Sbjct: 321 CLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAM 380
Query: 153 ----------YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDP 202
Y INAY + ++A F +M +G ++A +++++ +G+ RR
Sbjct: 381 KEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLS 440
Query: 203 EAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLR 262
+A ++ MK+ +P++ Y +L+ R + +++EM + PD+ + +
Sbjct: 441 DAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500
Query: 263 SA 264
SA
Sbjct: 501 SA 502
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G +P+ YN +ID G+ L A ++ M ++ PD V++ ++I + ++
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+R EL+QE + IM+ + D++ LL M+ +G +A +++
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 121 LVDVYGKSG 129
++ +G
Sbjct: 569 ALNALRDAG 577
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 47/274 (17%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
++ + KFN ++++ F+ M D +WNT+I C ++G ++A ELF M+ G
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
+ P ++ + I++ ++ ++ + +G + + LVD+YGK
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC------- 256
Query: 136 ECLEVLKSMGFKPTP----TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
+CLEV + + F+ P +N++I Y +G S V +M EG +PS L S+
Sbjct: 257 DCLEVAREV-FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSI 315
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVV------------------------------ 221
+ A R + Y+ + + D+
Sbjct: 316 LMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVA 375
Query: 222 -TYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
++ ++ + I V + K VY++MVS G PD
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 112/249 (44%), Gaps = 36/249 (14%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V D + +ID + F C + +A E + S+ + +WN +I + G +A
Sbjct: 340 VNADIYVNCSLIDLY--FKCGEANLA--ETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395
Query: 66 ELFQEMQQKGYSPCVLTYNIMI---NSMGAQEKWDQV--SDLLTRMQSQGLLPNA----- 115
E++ +M G P V+T+ ++ + + A EK Q+ S +R+++ LL +A
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 116 ---------------------VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
V++T ++ YG G+ +AL + ++ G KP
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL 515
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAE-GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
A+++A GL D+ + F +M ++ G++P + + +I+ G R EA+ ++Q E
Sbjct: 516 AVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
Query: 214 NDLQPDVVT 222
++++
Sbjct: 576 TSDNAELLS 584
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMA--TFERMLSEEIRPDTVTWNTLIDCHCK-AGYH 61
G++ D +I+ + F C DH A FE +IR D WN+L+ + K + +H
Sbjct: 34 GLRRDVVLCKSLINVY--FTCKDHCSARHVFENF---DIRSDVYIWNSLMSGYSKNSMFH 88
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D E + + P T+ +I + GA + + T + G + + V ++L
Sbjct: 89 DTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSL 148
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
V +Y K F ++ L+V M + + +N +I+ + Q G +++A+ F +M + G
Sbjct: 149 VGMYAKFNLFENS---LQVFDEMPERDVAS-WNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 182 KPSLLALNSLINA 194
+P+ ++L I+A
Sbjct: 205 EPNSVSLTVAISA 217
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
+ D +LID + K G + AE +F + Q+ ++N+MI+S + W +
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD----VAESWNVMISSYISVGNWFKAV 395
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
++ +M S G+ P+ VTFT+++ + + + + + +AL++ Y
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
++ G +A F + K +++ +I+A+G + EA M++ L+PD
Sbjct: 456 SKCGNEKEAFRIFNSIP----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
Query: 221 VTYTTLMKA 229
VT ++ A
Sbjct: 512 VTLLAVLSA 520
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 43/262 (16%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+S+G +P+ V I + L+ + + + D + L+D + K
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT- 119
+ A E+FQ+M +K ++ +N MI A+ ++L RM +G P+ T T
Sbjct: 259 LEVAREVFQKMPRKS----LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTS 314
Query: 120 ----------------------------------TLVDVYGKSGRFNDALECLEVLKSMG 145
+L+D+Y K G N A E + S
Sbjct: 315 ILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA----ETVFSKT 370
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
K +N +I++Y G +AV + +M + G+KP ++ S++ A + +
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 206 AVLQYMKENDLQPDVVTYTTLM 227
+ + E+ L+ D + + L+
Sbjct: 431 QIHLSISESRLETDELLLSALL 452
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S GV+PD + ++ + L+ + + D + + L+D + K G
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F + +K V+++ +MI++ G+ + + MQ GL P+ VT
Sbjct: 461 EKEAFRIFNSIPKKD----VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 121 LVDVYGKSGRFNDALECLEVLKS-MGFKPTPTMYNALINAYAQRG 164
++ G +G ++ L+ ++S G +P Y+ +I+ + G
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAG 561
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 31/297 (10%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK +G Y++++ F + + A+ ++ M++ +I +I K
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++FQ M +KG P ++ N +INS+G K V + + ++S G P+ T+
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKP-TPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ K+ R+ D L+ ++++S +YN + + + G ++AV +M
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI-------- 231
GL S + N +I+A + R+ A V ++M + D +P+ TY +L+++ I
Sbjct: 420 GLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEV 479
Query: 232 -----RVD-----------------KFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
+V+ +F +Y +M G PD K RAM+ L+
Sbjct: 480 EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLK 536
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+QP+ H N + + + A FE M +E T++ ++ +
Sbjct: 133 MRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLMLKAVAEVKG 191
Query: 61 HDRAEELFQEMQQK-GYSPC--VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
+ A +F+E++++ C V+ YN I+ G + + M+ G + +T
Sbjct: 192 CESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEIT 251
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
++ LV ++ + GR AL+ + + + A+I+A + D A+ F+ M
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSML 311
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
+G+KP+L+A N+LIN+ G+ + F V +K +PD T+ L+ AL + +++
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYE 371
Query: 238 KVPAVYE 244
V +++
Sbjct: 372 DVLQLFD 378
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 10/238 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G++P+ N +I++ GK + + + S +PD TWN L+ KA
Sbjct: 310 MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 61 HDRAEELFQEMQQKGYSPCVLT---YNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
++ +LF ++ + C L YN + S W++ LL M+ GL + +
Sbjct: 370 YEDVLQLFDMIRSENL--CCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ ++ KS + AL E + KP Y +L+ + L D+ + +K
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKK-- 485
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
++P + N+ I+ R A + M+E L+PD T +++ L + K
Sbjct: 486 ---VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 111/244 (45%), Gaps = 12/244 (4%)
Query: 29 AMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK----GYSPCVLTYN 84
A+ F+ M ++P+ N+ + C + G +A +F+ M++K G+ TY+
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGH-----TYS 180
Query: 85 IMINSMGAQEKWDQVSDL---LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL 141
+M+ ++ + + + L R + + V + T + + G+ + V+
Sbjct: 181 LMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVM 240
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRD 201
K G T Y+ L++ + + G S+ A++ + +M + A+ ++I+A ++ +
Sbjct: 241 KGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKW 300
Query: 202 PEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
A + Q M + ++P++V TL+ +L + K V VY + S G PD L
Sbjct: 301 DLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNAL 360
Query: 262 RSAL 265
+AL
Sbjct: 361 LTAL 364
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
Query: 3 SNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHD 62
+NG+ + + ++D +GK + A F M + ++V+W+ L+ +C+ G H+
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM----SKKNSVSWSALLGGYCQNGEHE 348
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
+A E+F+EM++K C T + A ++ R +G N + + L+
Sbjct: 349 KAIEIFREMEEKDLY-CFGTVLKACAGLAAVRLGKEIHGQYVR---RGCFGNVIVESALI 404
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D+YGKSG + A V M + T +NA+++A AQ G ++AV+ F M +G+K
Sbjct: 405 DLYGKSGCIDSASR---VYSKMSIRNMIT-WNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P ++ +++ A G E M K ++P Y+ ++ L R F +
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Query: 242 VYE 244
+ E
Sbjct: 521 LLE 523
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 40/252 (15%)
Query: 35 RMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ-KGYSPCVLTYNIMINSMGAQ 93
R+ E PD + W ++ K ++ A LF M + KG P T+ ++ + G
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 94 EKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMY 153
+ Q ++ ++ + G+ N V ++L+D+YGK G +A +V M K +
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA---RQVFNGMS-KKNSVSW 334
Query: 154 NALINAYAQRGLSDQAVNAFRKMTAE-------------------------------GLK 182
+AL+ Y Q G ++A+ FR+M + G
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+++ ++LI+ +G+ A V M ++ +T+ ++ AL + + + +
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEAVSF 450
Query: 243 YEEMVSSGCTPD 254
+ +MV G PD
Sbjct: 451 FNDMVKKGIKPD 462
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD + + ++D K + A FE M + + +L+ C+ G
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGK 267
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ + +M + G+ P ++ Y +++ K DLL M+ +G PNA +T
Sbjct: 268 MMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTV 327
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K R +A++ ++ + Y AL++ + + G D+ M +G
Sbjct: 328 LIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG 387
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
L PS L ++ A + E +++ M++ + PD+ Y +++ ++ + +
Sbjct: 388 LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 241 AVYEEMVSSGCTP 253
++ EM +G +P
Sbjct: 448 RLWNEMEENGLSP 460
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 5/250 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++P+ + V++ F + + A+ + M PD + L+D CK G A
Sbjct: 181 IEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 66 ELFQEMQQKGYSPCVLTY-NIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+LF++M+ + P L Y ++ K + +L +M G P+ V +T L+
Sbjct: 239 KLFEDMRMR--FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y +G+ DA + L ++ GF+P Y LI A + ++A+ F +M +
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ +L++ F + + + + VL M + L P +TY +M A + + F + + E
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 245 EMVSSGCTPD 254
+M PD
Sbjct: 417 KMRQIEYHPD 426
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 3/234 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G +P+ + Y V+I K + ++ AM F M E D VT+ L+ CK G
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+ + +M +KG P LTY ++ + +E +++ +L+ +M+ P+ +
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + K G +A+ ++ G P + +IN A +G +A + F++M G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 181 L--KPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALI 231
L L L+N +D++ A V + + + +V+++T + AL
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALF 546
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G +PD Y ++ + + A M P+ + LI CK
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ++F EM++ V+TY +++ K D+ +L M +GL+P+ +T+
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ + K F + LE +E ++ + + P +YN +I + G +AV + +M G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 181 LKPSLLALNSLINAFG 196
L P + +IN
Sbjct: 458 LSPGVDTFVIMINGLA 473
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 2/195 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG-LLPNAVTFTTLVDVYGKSGR 130
+Q Y + Y M+ + ++ V L+ M+ + L F LV + +
Sbjct: 139 KQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADM 198
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
A+E L+ + GF+P ++ L++A + G A F M +L S
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTS 257
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
L+ + + EA VL M E +PD+V YT L+ K + +M G
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 251 CTPDRKARAMLRSAL 265
P+ +L AL
Sbjct: 318 FEPNANCYTVLIQAL 332
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
FY+ +I ++G+ + +HAM TFE+M V++N L++ + D+ +LF E+
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 72 QQK--GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
Q+ P ++Y I+I S ++ +++ +MQ +G+ + FTT++ K G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
A + G + YN I + AQ+ ++ +M++ GLKP ++ N
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
L+ A+ E EA V + ++ N+ P+ T+ TL+ L + + A++++ V
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYM 342
Query: 250 GCTPD 254
PD
Sbjct: 343 HKIPD 347
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
N + PD+ Y ++I ++ + A+ +M + + T+ + T++ K G +
Sbjct: 168 NKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 227
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQ-EKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+ L+ EM +KG YN+ I M AQ E ++V +L+ M S GL P+ +++ L+
Sbjct: 228 ADNLWNEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
Y + G ++A + E L+ P + LI L +Q F+K
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKI 345
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
P L L+ E+++ +A +++ +K+
Sbjct: 346 PDFNTLKHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 62 DRAEELFQEMQQKGYSPCVLTY--NIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
D+A +++ + SP Y + + + ++ + L+ ++ + ++
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYS 106
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
TL+ YG++ FN A+ E + G + +NAL+NA D+ F ++
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR 166
Query: 180 GLK--PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
K P ++ LI ++ + +A +++ M+ ++ + +TT++ +L + +
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 238 KVPAVYEEMVSSGCTPDRKA 257
++ EMV GC D A
Sbjct: 227 VADNLWNEMVKKGCELDNAA 246
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G P +N +++ D F + D N LI C++G
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A +L E Q+ P V+T++ +I + K+++ LL RM+ + + P+ +TF
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ K GR + ++ LE +K G +P P Y ++ + + +A +M + G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALI 231
++PS L+ ++ E + E VL+ M + P + + +++ ++
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV 388
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 6/256 (2%)
Query: 2 KSNGVQPDRHFYNVMIDTFGK---FNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCK- 57
K QP Y +MI+ FG+ ++ ++ M T + L + R + L+ +
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIK--LEKRCRFSEEFFYNLMRIYGNL 144
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
AG +RA E+ M G P ++N ++N + + + +D++ + G+ +A
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
L+ +SG AL+ L+ +P ++ LI + +G ++A +M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
E ++P + N LI+ + R E +L+ MK +P+ TY ++ L+ +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 238 KVPAVYEEMVSSGCTP 253
+ + +M+S G P
Sbjct: 325 EAKEMMSQMISWGMRP 340
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 106/246 (43%), Gaps = 2/246 (0%)
Query: 9 DRHFYNVMIDTFGKF-NCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
+ FYN+M +G ++ A+ M P + ++N +++ A D ++
Sbjct: 131 EEFFYNLM-RIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKI 189
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F + G NI+I + + LL Q PN +TF+ L+ +
Sbjct: 190 FVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN 249
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
G+F +A + LE ++ +P +N LI+ ++G ++ ++ +M +G +P+
Sbjct: 250 KGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGT 309
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 247
++ + +R+ EA ++ M ++P ++Y ++ L ++ V +MV
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Query: 248 SSGCTP 253
+ G P
Sbjct: 370 NHGFVP 375
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLP-NAVTFTTLVDVYGK-SG 129
++K Y P Y +MIN G + +D++ +++ ++ + + F L+ +YG +G
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
R N A+E L + G P+ +N ++N L D+ F G++ LN
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS 249
LI E A +L + +P+V+T++ L++ KF + + E M
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 250 GCTPDRKARAMLRSALR 266
PD +L S LR
Sbjct: 267 RIEPDTITFNILISGLR 283
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++ L A A RM E I+PD +TWN+L + G ++A ++ +M+
Sbjct: 294 WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+KG +P V+++ + + + + +MQ +G+ PNA T +TL+ + G
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG------ 407
Query: 133 DALECLEVLKS----MGFKPTPTMY------NALINAYAQRGLSDQAVNAFRKMTAEGLK 182
CL +L S GF + AL++ Y + G A+ F G+K
Sbjct: 408 ----CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW-----GIK 458
Query: 183 -PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
SL + N ++ + R E A M E ++PD +T+T+++
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 9 DRHF--YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
DR+ +N ++ ++ K +D A+ + M ++PD VTWN+L+ + G A
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 67 LFQEMQQKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+ + MQ G P + + ++ ++ G + + + R Q L + TTL+D
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ---LWYDVYVETTLID 268
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K+G A +++ + +N+L++ + L A +M EG+KP
Sbjct: 269 MYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ NSL + + + +A V+ MKE + P+VV++T + + F V+
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 244 EEMVSSGCTPDRKARAMLRSAL 265
+M G P+ + L L
Sbjct: 385 IKMQEEGVGPNAATMSTLLKIL 406
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 31/243 (12%)
Query: 35 RMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGY----SPCVLTYNIMINS- 89
++ E + D + WN ++ + ++G ++A ELF+EMQ G S V + N
Sbjct: 44 KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103
Query: 90 --------------MGAQEKWDQVSDLLTRMQSQGLLP------------NAVTFTTLVD 123
+G + + L+ G L N ++ +++
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K G +DA+ L+ ++ G KP +N+L++ YA +GLS A+ ++M GLKP
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
S +++SL+ A E A+ Y+ N L DV TTL+ I+ V+
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 244 EEM 246
+ M
Sbjct: 284 DMM 286
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++P + ++ + L A +L ++ D TLID + K GY
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F M K ++ +N +++ + L+ RM+ +G+ P+A+T+ +
Sbjct: 276 LPYARMVFDMMDAKN----IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L Y G+ AL+ + +K G P + A+ + ++ G A+ F KM EG
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 181 LKPSLLALNSLINAFG 196
+ P+ +++L+ G
Sbjct: 392 VGPNAATMSTLLKILG 407
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
D + ++D +GK L A+ F + ++ + +WN ++ + G + F
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEGIAAF 485
Query: 69 QEMQQKGYSPCVLTYNIMI----NSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
M + G P +T+ ++ NS QE W + +R G++P + +VD+
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR---YGIIPTIEHCSCMVDL 542
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
G+SG ++A + +++M KP T++ A +++
Sbjct: 543 LGRSGYLDEA---WDFIQTMSLKPDATIWGAFLSS 574
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 12/204 (5%)
Query: 64 AEELFQEMQQKGYSPCVLTYN--IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
A +LF EM ++ L +N +M+N W++ +L MQ G T L
Sbjct: 42 ANKLFDEMPKRD----DLAWNEIVMVNLRSGN--WEKAVELFREMQFSGAKAYDSTMVKL 95
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ V F + + + +G + +M N+LI Y++ G + + F M L
Sbjct: 96 LQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL 155
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ NS+++++ + +A +L M+ L+PD+VT+ +L+ A
Sbjct: 156 S----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 242 VYEEMVSSGCTPDRKARAMLRSAL 265
V + M +G P + + L A+
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAV 235
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G +P YN ++D K D A+A +E + + ++ T+ L+ CKAG
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ E+ Q M++ P V Y MI ++ ++ D + M+ + P+ + + T
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
LV K GR E +K +Y LI + G A N + + G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ N++I + +A+ + Q E +L+PD T + +M A + +++
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFS 458
Query: 241 AVYEEMVSSG 250
V E + G
Sbjct: 459 NVLERIGELG 468
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 2 KSNGVQPDRHFYNVM---IDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA 58
K G + D YN ++ G F D E M S+ P + LI H
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLP---ELMDSQGRPPSEKQFEILIRMHADN 206
Query: 59 GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
R ++++M++ G+ P V YN +++++ +D + + GL+ + TF
Sbjct: 207 RRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTF 266
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
LV K+GR + LE L+ ++ KP Y A+I G D ++ + +M
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+ +KP ++A +L+ +D R + + MK + D Y L++ + K
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 239 VPAVYEEMVSSGCTPD 254
++E++V SG D
Sbjct: 387 ACNLWEDLVDSGYIAD 402
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 72 QQKGYSPCVLTYNIM---INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
+QKGY YN +N G DQ+ +L M SQG P+ F L+ ++ +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPEL---MDSQGRPPSEKQFEILIRMHADN 206
Query: 129 GRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
R E +K GFKP +YN +++A + G D A+ + +GL
Sbjct: 207 RRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTF 266
Query: 189 NSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
L+ + R E +LQ M+EN +PDV YT ++K L+ V++EM
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 249 SGCTPDRKARAMLRSAL 265
PD A L L
Sbjct: 327 DEIKPDVMAYGTLVVGL 343
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 93/220 (42%)
Query: 42 RPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSD 101
+ D +N C + G+ A++L + M +G P + I+I + +V
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 102 LLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYA 161
+ +M+ G P + ++D K+G F+ AL E K G T + L+
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 162 QRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVV 221
+ G ++ + ++M KP + A ++I + + V M+ ++++PDV+
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 222 TYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
Y TL+ L + + + ++ EM DR+ +L
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVL 374
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/254 (17%), Positives = 102/254 (40%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G P + ++I +E+M +P +N ++D K GY
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A ++++ ++ G T+ I++ + + +++ ++L RM+ P+ +T
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ G + +L + ++ KP Y L+ + G ++ F +M +
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQ 363
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ LI F D + A + + + ++ D+ Y ++K L V++ K
Sbjct: 364 ILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAY 423
Query: 241 AVYEEMVSSGCTPD 254
+++ + PD
Sbjct: 424 KLFQVAIEEELEPD 437
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 113/300 (37%), Gaps = 36/300 (12%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ N +PD Y MI T LD ++ ++ M +EI+PD + + TL+ CK G
Sbjct: 289 MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 61 HDRAEELFQEM-----------------------------------QQKGYSPCVLTYNI 85
+R ELF EM GY + YN
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
+I + + + D+ L + L P+ T + ++ Y R +D LE + +G
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+ + + A + A++ F + +G S+ N L+ A + ++
Sbjct: 469 YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSL 527
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
++ M++ +PD +Y+ + + + +E+++ C P A L L
Sbjct: 528 SLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGL 587
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE-IRPDTVTWNTLIDCHCKAG 59
MK ++PDR YN ++ K + + A + M E+ I P+ VT+N+LI CKA
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 60 YHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
+ A+++F EM +KG P + TY+ + + E +V +LL +M+ G P T+
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYI 444
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
L+ + F++ L + +K P + Y +I+ G ++A +++M +
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 180 GLKPS 184
G++P+
Sbjct: 505 GMRPN 509
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + GV+ D Y+ MI + K L+ + F+RM E I PD +N ++ KA +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 61 HDRAEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A L + M ++KG P V+TYN +I + K ++ + M +GL P T+
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+ + ++G + E L ++ MG +PT Y LI + D + + +M +
Sbjct: 413 AFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 469
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
+ P L + +I+ + + EA+ + MK+ ++P+
Sbjct: 470 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 141 LKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRR 200
+ ++G K Y+++I+ Y++ G ++ + F +M E ++P N++++A +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 201 DPEAFAVLQYMKEND-LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD-RKAR 258
EA +++ M+E ++P+VVTY +L+K L + K + V++EM+ G P R
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 259 AMLR 262
A +R
Sbjct: 413 AFMR 416
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 41/278 (14%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V+ D +N ++ + + A+ F M E + P+ +TWN +I + G D A+
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF------- 118
++F +MQ G P ++++ M+N M ++ L +MQ GL PNA +
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 119 -----------------------------TTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
T+LVD+Y K G N A +V S +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA---EKVFGSKLYSEL 613
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL- 208
P + NA+I+AYA G +A+ +R + GLKP + + ++++A +A +
Sbjct: 614 P-LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 209 QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ + ++P + Y ++ L + K + EEM
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 124/265 (46%), Gaps = 8/265 (3%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG++ D +++ + K +++A F+RM + D VTWN +I + + G +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVED 358
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A + Q M+ + +T ++++ E ++ + V +T++D
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K G DA + + + ++N L+ AYA+ GLS +A+ F M EG+ P
Sbjct: 419 MYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+++ N +I + + + EA + M+ + + P+++++TT+M +++ +
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFL 534
Query: 244 EEMVSSGCTPDRKARAMLRSALRYM 268
+M SG P+ + + SA ++
Sbjct: 535 RKMQESGLRPNAFSITVALSACAHL 559
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 20 FGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPC 79
+ K + L+ A F ++ +R + +W +I C+ G + A F EM + P
Sbjct: 117 YAKCDALEIAEVLFSKL---RVR-NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 80 VLTYNIMINSMGAQEKWDQVS-DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECL 138
+ + GA KW + + + GL ++L D+YGK G +DA
Sbjct: 173 NFVVPNVCKACGAL-KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA---- 227
Query: 139 EVLKSMGFKPTP----TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
S F P +NAL+ Y Q G +++A+ F M +G++P+ + +++ ++A
Sbjct: 228 ----SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
Query: 195 FG-----EDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
E+ + A A++ N ++ D + T+L+ +V V++ M
Sbjct: 284 SANMGGVEEGKQSHAIAIV-----NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM-Q 72
N MI + + L A+A + + ++PD +T ++ AG ++A E+F ++
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++ PC+ Y +M++ + + + ++ L+ M + P+A +LV K +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLVASCNKQRK-- 731
Query: 133 DALECLEVLKSMGFKPTPTM---YNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
E ++ L + P Y + NAYA G D+ V M A+GLK
Sbjct: 732 --TELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++PD YN MI F + + + M + I+P++ ++ +I D
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
++ M+ +G + V TYNI I S+ ++K + LL M S G+ PN VT++ L+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+ F +A + +++ + G KP Y LI + G + A++ ++ + PS
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKE 213
+ SL+N +D + EA ++ +KE
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 4/251 (1%)
Query: 7 QPD---RHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+PD F I + + N LDH++ F + EI + N L+ A +
Sbjct: 110 RPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKE 169
Query: 64 AEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+ ++ EM + G P + TYN MI ++ M+ +G+ PN+ +F ++
Sbjct: 170 AKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMI 229
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
+ + ++ + L ++K G + YN I + +R S +A M + G+K
Sbjct: 230 SGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMK 289
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ + + LI+ F + EA + + M +PD Y TL+ L + F ++
Sbjct: 290 PNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Query: 243 YEEMVSSGCTP 253
+E + P
Sbjct: 350 CKESMEKNWVP 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++P+ + +MI F + D M + T+N I CK
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ L M G P +TY+ +I+ ++ +++ L M ++G P++ + T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
L+ K G F AL + + P+ ++ +L+N A+ ++A
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 381
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK GV YN+ I + K A A + MLS ++P+TVT++ LI C
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A++LF+ M +G P Y +I + ++ L + +P+ +
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 121 LVDVYGKSGRFNDALECLEVLK 142
LV+ K + +A E + +K
Sbjct: 368 LVNGLAKDSKVEEAKELIGQVK 389
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 6/239 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y++++ K L A F+ ML ++ + + C+ G AE L EM+
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 73 QKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
+ G SP T+N +I G +EK + ++ M ++GL+P+ F +V K
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV---MVTRGLMPSCSAFNEMVKSVSKIE 423
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
N A E L GF P Y+ LI + + DQA+ F +M + P
Sbjct: 424 NVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFR 483
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
SLI + L+ MK+ ++P+ Y L+KA ++ VY EM+S
Sbjct: 484 SLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +GV P +N +I F +F + + E M++ + P +N ++ K
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+RA E+ + KG+ P TY+ +I DQ L M+ + + P F +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRS 484
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ G+ + L+++K +P +Y+ALI A+ + G A + +M +
Sbjct: 485 LIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/248 (17%), Positives = 96/248 (38%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N +I K D +E + + I P+ +T +I CK G +L +
Sbjct: 203 NTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
K P V+ ++ + + + ++ LL R+ + ++ + + ++ +V K G
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS 322
Query: 134 ALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLIN 193
A + + + GF +Y + ++G +A +M G+ P N LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 194 AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
F + + + M L P + ++K++ +++ ++ + + + G P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 254 DRKARAML 261
D + L
Sbjct: 443 DEHTYSHL 450
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 35/228 (15%)
Query: 26 LDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNI 85
++ +M+ +R+L + + DT+ ++ ++ K G A ++F EM Q+G+S
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA------- 337
Query: 86 MINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMG 145
N+ +T V V + G +A L ++ G
Sbjct: 338 ----------------------------NSFVYTVFVRVCCEKGDVKEAERLLSEMEESG 369
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
P +N LI +A+ G ++ + M GL PS A N ++ + + A
Sbjct: 370 VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRAN 429
Query: 206 AVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+L + PD TY+ L++ I + + ++ EM +P
Sbjct: 430 EILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSP 477
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/215 (16%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 40 EIRPDT-VTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQ 98
EI T + ++ L+ C+ K Y + ++F+ + G++ V+T N +I+ + D
Sbjct: 158 EISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDL 217
Query: 99 VSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
V + + + PN +T ++ V K GR + ++ L+ + P+ + +L+
Sbjct: 218 VWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVF 277
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
+ +++++ +++ + + + + ++ A ++ A V M +
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ YT ++ + + EM SG +P
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 38 SEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWD 97
+E + P+ V W LI+ + H + + +K ++ + Y+ +I+ + +
Sbjct: 342 AELLEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIE 401
Query: 98 QVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI 157
V +L +M G+ P+ +T T LV +Y KSG F A E E LKS G +P +Y A+I
Sbjct: 402 DVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMI 461
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAF---GEDRRDPEAFAVLQYMKEN 214
Y G ++M A+ LK S +L+ A+ G+ + +QY +
Sbjct: 462 LGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDG 521
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALR 266
L + Y+ ++A + + K + ++EM G PD K A L A +
Sbjct: 522 PLSFE--AYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYK 571
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 9/233 (3%)
Query: 3 SNGVQPDRHF------YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHC 56
+ GV ++ F Y+ +I K N ++ ++M I PD +T L+ +
Sbjct: 371 AEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYS 430
Query: 57 KAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
K+G +RA E F+ ++ G P Y MI K L+ MQ++ L +
Sbjct: 431 KSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEE 490
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP-TMYNALINAYAQRGLSDQAVNAFRK 175
+ L+ Y + G N A ++ P Y+ + AY + G D+A + F +
Sbjct: 491 VYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDE 550
Query: 176 MTAEGLKPSLLALNSLINAF-GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLM 227
M G KP + +L+ A+ GE+ D +A +L ++++ ++ V+TYT L+
Sbjct: 551 MRKLGHKPDDKCIANLVRAYKGENSLD-KALRLLLQLEKDGIEIGVITYTVLV 602
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M NG+ PD ++ + K + A FE + S +RPD + +I + AG
Sbjct: 410 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 469
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ--SQGLLPNAVTF 118
E L +EMQ K Y ++ + + + + + MQ S G L + +
Sbjct: 470 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPL-SFEAY 528
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+ V+ YGK+G+ + A + ++ +G KP L+ AY D+A+ ++
Sbjct: 529 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 588
Query: 179 EGLKPSLLALNSLIN 193
+G++ ++ L++
Sbjct: 589 DGIEIGVITYTVLVD 603
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y++ ++ +GK +D A + F+ M +PD L+ + D+A L +++
Sbjct: 528 YSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLE 587
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G V+TY ++++ M ++ LL ++ G P +L +Y
Sbjct: 588 KDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEK 647
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
L+ L VL++ + P ++ +I+A + G A ++ M A PS
Sbjct: 648 KTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARRMYKYMEARKFLPS 699
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 11 HFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQE 70
HF N+++ K + +M + ++P WN ++ KA A ++F+
Sbjct: 425 HF-NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKA 483
Query: 71 MQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGR 130
M G P V++Y +++++ + +D+ + M G+ PN +TT+ V +
Sbjct: 484 MVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQK 543
Query: 131 FNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
FN L+ + S G +P+ +NA+I+ A+ GLS A F +M +E ++P+ +
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
LI A D + A+ + + L+ Y ++K+
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 24 NCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTY 83
N + M S +RP LI + ++ +EL++ ++++ +
Sbjct: 325 NWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVC 384
Query: 84 NIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT-------FTTLVDVYGKSGRFNDALE 136
N +I MG +KW ++ + +G PN ++ F L+ K G + +
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 137 CLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFG 196
L ++ G KP +NA++ A ++ + A+ F+ M G KP++++ +L++A
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 197 EDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
+ + EAF V +M + ++P++ YTT+ L KF+ + + +EM S G P
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G++P R +N ++ K + A+ F+ M+ +P +++ L+ K
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+D A ++ M + G P + Y M + + Q+K++ + LL M S+G+ P+ VTF
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ ++G A E +KS +P Y LI A A A K EG
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEG 628
Query: 181 LKPS 184
LK S
Sbjct: 629 LKLS 632
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 17/277 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRP-----DTVTWNTLIDCH 55
M S GV+P R + +I + C + L + IR N LI
Sbjct: 337 MDSAGVRPSREEHERLI-----WACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLM 391
Query: 56 CKAGYHDRAEELFQEMQQKGYSPCVLTY-------NIMINSMGAQEKWDQVSDLLTRMQS 108
KA A E+++++ +G P L+Y NI++++ + W LL +M+
Sbjct: 392 GKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED 451
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQ 168
+GL P + ++ K+ A++ + + G KPT Y AL++A + L D+
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDE 511
Query: 169 AVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMK 228
A + M G++P+L A ++ + ++ +L+ M ++P VVT+ ++
Sbjct: 512 AFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVIS 571
Query: 229 ALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSAL 265
R + M S P+ ML AL
Sbjct: 572 GCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 72 QQKGYSPCVLTYNIMI-NSM-GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
++K S V+ N+ I NS+ GA + + +L M+ +G++PN VT+ TL+ +Y + G
Sbjct: 174 RKKSESGGVIGPNLFIYNSLLGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEG 233
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAY 160
F AL L++ K GF+P P Y+ + Y
Sbjct: 234 EFLKALGILDLTKEKGFEPNPITYSTALLVY 264
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLK-----SMG-FKPTPTMYN 154
D+ ++ +G LP V F ++ +GK R A+ ++ LK S G P +YN
Sbjct: 133 DVDAVLKDKGELPLQV-FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYN 191
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
+L+ A RG +A + M EG+ P+++ N+L+ + E+ +A +L KE
Sbjct: 192 SLLGA--MRGFG-EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEK 248
Query: 215 DLQPDVVTYTTLMKALIRVD 234
+P+ +TY+T + R++
Sbjct: 249 GFEPNPITYSTALLVYRRME 268
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 8/234 (3%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+++M+ + + + A A F R+ + D V WNTLI + + GY D A + F MQ
Sbjct: 211 WSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+GY P +T + ++++ + D ++ + + +G+ N L+D+Y K G
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
+A V +S+ + N++I+ A G +A+ F M + LKP + +++
Sbjct: 327 NA---TSVFESISVRSVACC-NSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 382
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
A E + MK D++P+V + L+ L R K + + +EM
Sbjct: 383 TACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 42/272 (15%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERM--------------------------LS 38
GV D + +I +GK C+ A F+ M L
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 39 EEIRP--DTVTWNTLIDCHCKAGYHDRAEELFQEM--QQKGYSPCVLTYNIMINSMGAQE 94
EEI +TVTW +I + K ++A ELF+ M + K + + +N+ ++
Sbjct: 136 EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMED 195
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
D+ + NA ++ ++ Y + G ++A + F ++N
Sbjct: 196 ARKFFEDIPEK--------NAFVWSLMMSGYFRIGDVHEARAIFYRV----FARDLVIWN 243
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
LI YAQ G SD A++AF M EG +P + ++S+++A + R V +
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
++ + L+ + +V+E +
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESI 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ ++ N +ID + K L++A + FE S +R N++I C G A
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFE---SISVR-SVACCNSMISCLAIHGKGKEA 359
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
E+F M+ P +T+ ++ + + + + M++Q + PN F L+ +
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 419
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
G+SG+ +A ++K M KP T+ AL+ A
Sbjct: 420 LGRSGKLKEA---YRLVKEMHVKPNDTVLGALLGA 451
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 48/284 (16%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG +P NV+I+ + KFN L+ A F++M + ++W T+I + K H +
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQK 145
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A EL M + P V TY+ ++ S V L + +GL + + L+D
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALID 202
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
V+ K G DAL + + + ++N++I +AQ SD A+ F++M G
Sbjct: 203 VFAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 184 ---------------SLLAL------------------NSLINAFGEDRRDPEAFAVLQY 210
+LL L N+L++ + + +A V
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 211 MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
MKE DV+T++T++ L + + ++E M SSG P+
Sbjct: 319 MKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 20/269 (7%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ D + +ID F K + A++ F+ M++ D + WN++I + D A
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVA 244
Query: 65 EELFQEMQQKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
ELF+ M++ G+ T ++ + + E Q + + +L NA L
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA-----L 299
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
VD+Y K G DAL +K TM I+ AQ G S +A+ F +M + G
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTM----ISGLAQNGYSQEALKLFERMKSSGT 355
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKE-NDLQPDVVTYTTLMKALIRVDKFHKVP 240
KP+ + + ++ A + + + MK+ + P Y ++ L + K
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 241 AVYEEMVSSGCTPDRKARAMLRSALRYMR 269
+ EM C PD L A R R
Sbjct: 416 KLLNEM---ECEPDAVTWRTLLGACRVQR 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K G+ P R Y MID GK LD A+ M E PD VTW TL+ C+ +
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGA-CRVQRN 442
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGL 111
E + TY ++ N +KWD V ++ TRM+ +G+
Sbjct: 443 MVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 10/242 (4%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
+M+D + N A+ TF+ M + P + L+ C+ G+ ++AEE F +K
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKK 252
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSD---LLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
+ V +N+++N G W V++ + M + + PN +++ ++ + K G
Sbjct: 253 LFPVDVEGFNVILN--GWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
D+L + +K G P +YN+L+ + D+A+ +K+ EGLKP + NS+
Sbjct: 311 FDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
I E + A VL M +L P V T+ ++A+ F K V +M S
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDL 426
Query: 252 TP 253
P
Sbjct: 427 GP 428
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ P YN ++ + +C D AM +++ E ++PD+VT+N++I C+AG
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A + M + SP V T++ + ++ +++ ++L +M+ L P TF
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPTEETFLL 435
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ K + +AL+ + P +Y A I G ++A + +M ++G
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Query: 181 L 181
Sbjct: 496 F 496
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 41/246 (16%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
+ P++ Y+ MI F K L ++ ++ M + P +N+L+ + D A
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+L +++ ++G P +TYN MI + K D ++L M S+ L P TF ++
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
F LE L +K PT + L
Sbjct: 410 N----FEKTLEVLGQMKISDLGPTEETF-------------------------------L 434
Query: 186 LALNSLINAFGEDRRDPE-AFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
L L L + PE A + M ++ + Y ++ L+ K +Y
Sbjct: 435 LILGKLFKG-----KQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYS 489
Query: 245 EMVSSG 250
EM S G
Sbjct: 490 EMKSKG 495
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 46/283 (16%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N++I+ + K L+ A FER+ S D V+W ++ID + +AG RA LFQ++
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 74 K-------------------------------GYSPCVLTYNIMINSMGAQEKWDQVSDL 102
K G P TY+++++S GA DQ +
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Query: 103 --LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
+ + P+ + +LV +Y K G DA E + M K T + +N++I
Sbjct: 489 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE---IFAKMVQKDTVS-WNSMIMGL 544
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPD 219
+ GL+D+A+N F++M G KP+ + +++A + + MKE +QP
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 220 VVTYTTLMKALIRVDKFHKVPAVYEEMVSS-GCTPDRKARAML 261
+ Y +++ L R K + EE +S+ TPD L
Sbjct: 605 IDHYISMIDLLGRAGKLKEA----EEFISALPFTPDHTVYGAL 643
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD N ++ + K ++ A F +M ++ DTV+WN++I G D+A L
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVDVYG 126
F+EM G P +T+ ++++ + +L M ++ + P + +++D+ G
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
++G+ +A E + L F P T+Y AL+
Sbjct: 617 RAGKLKEAEEFISALP---FTPDHTVYGALLG 645
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
V W +L+ + K GY D A LF+ M ++ ++T N M+ + ++ L
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERN----IVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
M N V++T ++ GR DA+E + + + +N L+ + G
Sbjct: 133 EMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNG 183
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
++A F M + +++ N++I + E+ EA + M E +VVT+T
Sbjct: 184 DMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWT 235
Query: 225 TLMKALIRVDKFHKVPAVYEEM 246
+++ R + ++ EM
Sbjct: 236 SMVYGYCRYGDVREAYRLFCEM 257
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 60/307 (19%)
Query: 11 HFY--NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
H Y + +ID + K CL +A F+RM + + V+W ++ + + G + A ++F
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV----VSWTAMVVGYGQTGRAEEAVKIF 359
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
+MQ+ G P T I++ ++ S + + GL+ +LV +YGK
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 129 G----------------------------RFNDALECLEVLKSM---GFKPTPTMYNALI 157
G +F A+E +++ M G KP +I
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 158 NAYAQRGLSDQAVNAFRKMTAE-GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDL 216
+A ++ GL ++ F+ MT+E G+ PS+ + +I+ F R EA ++++
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA---MRFINGMPF 536
Query: 217 QPDVVTYTTLMKA----------------LIRVDKFHKVPAVYEEMVSSGCTPDR-KARA 259
PD + +TTL+ A LI +D H PA Y + S + + + A
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHH--PAGYTLLSSIYASKGKWDSVA 594
Query: 260 MLRSALR 266
LR +R
Sbjct: 595 QLRRGMR 601
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 9/254 (3%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++ D++ + ++ G ++ ++ + + LID +CK
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ +F M+QK V+++ M+ G + ++ + MQ G+ P+ T
Sbjct: 321 LHYAKTVFDRMKQKN----VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + + + G T+ N+L+ Y + G D + F +M
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR- 435
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
++ ++++A+ + R E + M ++ L+PD VT T ++ A R K
Sbjct: 436 ---DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 241 AVYEEMVSS-GCTP 253
++ M S G P
Sbjct: 493 RYFKLMTSEYGIVP 506
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+ D +N MI + + D A+ + M I+PD +TWN LI ++ E
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT------ 120
+ + M GY P V+++ +I+ + + ++ D +M + GL PN+ T T
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 121 -----------------------------LVDVYGKSGRFNDALECLEVLKSMGFKPTPT 151
L+D+YGK G ++A+ +L K T
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM----ILFRKTPKKTTV 355
Query: 152 MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
+N++I YA GL+D+AV F +M A G K L +++ A
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 35 RMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYS------PCVL--TYNIM 86
++ E + D +I + GY+ + + F+EM + G P +L + N++
Sbjct: 72 KVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLL 131
Query: 87 INSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGF 146
G + L+ + + +A ++L+D+Y K G +A + V +G
Sbjct: 132 DREFG-----KMIHCLVLKFSYE---SDAFIVSSLIDMYSKFGEVGNARK---VFSDLG- 179
Query: 147 KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFA 206
+ ++NA+I+ YA +D+A+N + M G+KP ++ N+LI+ F R + +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 207 VLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSA-- 264
+L+ M + +PDVV++T+++ L+ + K +++M++ G P+ L A
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 265 -LRYMRQ 270
L YM+
Sbjct: 300 TLAYMKH 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ + ++D +GK + AM F + + TVT+N++I C+ G D+A
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRK----TPKKTTVTFNSMIFCYANHGLADKA 373
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVD 123
ELF +M+ G LT+ ++ + D +L MQ++ ++P + +VD
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+ G++G+ +E E++K+M +P ++ AL+ A G
Sbjct: 434 LLGRAGKL---VEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 20/230 (8%)
Query: 51 LIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
L+ + + G A ++F EM ++ S CV +MI + + + D M G
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCV----VMIGACARNGYYQESLDFFREMYKDG 112
Query: 111 LLPNAVTFTTLVDVYGKSGR------FNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
L +A +L+ K+ R F + CL VLK ++ + ++LI+ Y++ G
Sbjct: 113 LKLDAFIVPSLL----KASRNLLDREFGKMIHCL-VLK-FSYESDAFIVSSLIDMYSKFG 166
Query: 165 LSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYT 224
V RK+ ++ + L+ N++I+ + + + EA +++ MK ++PDV+T+
Sbjct: 167 ----EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWN 222
Query: 225 TLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLKS 274
L+ + KV + E M G PD + + S L + Q K+
Sbjct: 223 ALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTV-TWNTLIDCHCKAG 59
MK+N V+ D + + + + ++ A F M+ I TV + ++ C G
Sbjct: 165 MKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNG 224
Query: 60 YHDRAEELFQEMQ-QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF 118
RA EL +EM KG ++T+ MI + ++++ +L M+ + ++ + ++
Sbjct: 225 EITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSY 284
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+D + G+ +A + ++ + +YN ++N Y++ GL ++ + + +M++
Sbjct: 285 KVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSS 344
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G+ P+ L+N + + EA + L ++ N+ + D Y+TL + RV K
Sbjct: 345 RGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDK 404
Query: 239 VPAVYEEMVSSGCTP 253
V EM+ G P
Sbjct: 405 SLEVVAEMIRDGFIP 419
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 5 GVQPDRHFYNVMIDTFGK---FNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
GV+ + + MI K F LD + E+ E + D ++ LID G
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEK---ESVMLDLDSYKVLIDGFTSYGKV 297
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
+ AE L M K YN+++N ++V +L + M S+G+ PN T+ L
Sbjct: 298 EEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVL 357
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
++ K+G+ +A+ L L+ F+ MY+ L + G+ D+++ +M +G
Sbjct: 358 MNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
P L ++ E R EA ++ + + ++P
Sbjct: 418 IPGATICERLADSLFEVNR-KEAQMLITIVVKCGIKP 453
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ V D Y V+ID F + ++ A M +++R ++ +N +++ + + G
Sbjct: 272 MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGL 331
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
++ EL+ EM +G +P TY +++N + K + L ++ + ++T
Sbjct: 332 VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYST 391
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
L + + G + +LE + + GF P T+ L ++
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADS 430
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 20/268 (7%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ D H +I +GK + A R+ IR D VTWN +ID + K G +
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSA----RRIFDCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEK---WDQVSDLLTRMQSQGLLPNAVTFTTL 121
L ++M+ + P T+ +++S E V+DLL + + + +A+ T L
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL---EEERIALDAILGTAL 369
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
VD+Y K G A+E +K K + A+I+ Y GL+ +AV F KM E
Sbjct: 370 VDMYAKVGLLEKAVEIFNRMKDKDVKS----WTAMISGYGAHGLAREAVTLFNKMEEENC 425
Query: 182 K--PSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHK 238
K P+ + ++NA E + M E P V Y ++ L R + +
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEE 485
Query: 239 VPAVYEEMVSSGCTPDRKARAMLRSALR 266
YE + + T D A L +A R
Sbjct: 486 ---AYELIRNLPITSDSTAWRALLAACR 510
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
K G++PD YN MI + + + M + I+P ++ +ID K
Sbjct: 174 KMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKF 233
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
D ++ + M + G V TYNIMI + ++K + L+ + S + PN+VT++ L
Sbjct: 234 DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
+ + ++A+ EV+ G+KP Y LI+ + G + A+ R+ +
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
PS + L+N + EA ++ +KE
Sbjct: 354 VPSFSVMKWLVNGLASRSKVDEAKELIAVVKE 385
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 4/251 (1%)
Query: 7 QPD---RHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
QPD F I +G+ N LD ++ TF + EI + N L+ A +
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE 164
Query: 64 AEELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A ++ EM + G P + TYN MI + ++ M+ + + P A +F ++
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMI 224
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D + K +F++ + + ++ G YN +I +R S +A + + ++
Sbjct: 225 DGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
P+ + + LI+ F + EA + + M N +PD Y TL+ L + F +
Sbjct: 285 PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALIL 344
Query: 243 YEEMVSSGCTP 253
E + P
Sbjct: 345 CRESMEKNWVP 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ ++P + +MID F K D M + T+N +I C CK
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A+ L + P +TY+++I+ ++E D+ +L M G P++ + T
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 121 LVDVYGKSGRFNDAL-ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA 169
L+ K G F AL C E ++ + P+ ++ L+N A R D+A
Sbjct: 328 LIHCLCKGGDFETALILCRESMEK-NWVPSFSVMKWLVNGLASRSKVDEA 376
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 112/249 (44%), Gaps = 2/249 (0%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKS G++P R YN +I K A E E P T+ L++ CK
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A + + M +K + YNI + + + ++ ++L M P+ T T
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGF-KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++ K GR +DA++ L+ + + F P N ++ +G +++A++ ++ E
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 180 G-LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+KP ++A N++I + + EA +V +++ + D TY ++ L +K
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 239 VPAVYEEMV 247
+++++
Sbjct: 573 AKKFWDDVI 581
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEI-RPDTVTWNTLIDCHCKAG 59
M +PD + N +I+ K +D AM + M++ + PD VT NT++ C
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM---CGLL 494
Query: 60 YHDRAEE----LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNA 115
RAEE L + M + P V+ YN +I + K D+ + +++ + ++
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 116 VTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
T+ ++D + + + A + + + + +Y A + Q G A +
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK 235
+ G P+++ N++I EA+ +L+ M++N PD VT+ L DK
Sbjct: 615 LADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL-------DK 667
Query: 236 FH 237
H
Sbjct: 668 LH 669
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 91/252 (36%), Gaps = 40/252 (15%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDL 102
PD VT+ TLI +C+ + A ++F EM+ G P LT +++I + L
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 103 LTRM-----QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLE------------------ 139
+ + A F LVD + G FND E E
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 140 -----------------VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
++KS G KP T YNA+I+ + G +A + +
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
PS L+ + ++ +A VL+ M + Y ++ L +D ++ V
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 243 YEEMVSSGCTPD 254
M+ C PD
Sbjct: 435 LVSMLQGDCRPD 446
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 36 MLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGY-SPCVLTYNIMINSMGAQE 94
ML + RPD T NT+I+ CK G D A ++ +M + +P +T N ++ + AQ
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 95 KWDQVSDLLTR-MQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMY 153
+ ++ D+L R M + P V + ++ K + ++A+ L+ T Y
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 154 NALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
+I+ D A + + + + + + +A L + +
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 214 NDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ P+VV Y T++ R + + EEM +G PD
Sbjct: 618 SGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 9/228 (3%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
D A+ + + RPD++ +++I C AG D A F G+ P T N++
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 87 INSMGAQEKWDQVSDLLTRMQS--QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
I + ++ R+ + +P+ + L++ R DA + + +++
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
G P + LI Y + + A F +M G++P+ L L+ LI F + RD E
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK-MRDVET 250
Query: 205 FAVL-----QYMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
L +YMK E D + L+ ++ R F+ + + E M
Sbjct: 251 GRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
+I +GK LD A F +M I+ D V W +I + + G A +LF EM++ G
Sbjct: 274 LISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
SP T + ++++ G+ + + T L N T LVD+YGK GR +A
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA- 388
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINA 194
L V ++M K T +NA+I AYA +G + +A+ F +M+ + PS + +++A
Sbjct: 389 --LRVFEAMPVKNEAT-WNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSA 441
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 20/248 (8%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ D H + +I + K + +A F+ E DTV+WN++I + +AGY A
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFD----EITERDTVSWNSMISGYSEAGYAKDA 217
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT-RMQSQGLLPNAVTFTT--- 120
+LF++M+++G+ P T +++ +GA + DL T R+ + + + +T
Sbjct: 218 MDLFRKMEEEGFEPDERT---LVSMLGA---CSHLGDLRTGRLLEEMAITKKIGLSTFLG 271
Query: 121 --LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
L+ +YGK G + A + K + A+I Y+Q G S +A F +M
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
G+ P L+++++A G + + E LQ ++ T L+ + + +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 239 VPAVYEEM 246
V+E M
Sbjct: 388 ALRVFEAM 395
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++PD YN +++ F + +RP+ T+ ++ ++G DR
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
+ F++M+ G +P +TY +++ ++ + K ++ + + M+ +G++ + L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 126 GKSGRFNDA-LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
+GR+ DA LE + + +P + LI A G D + F+ M + P+
Sbjct: 457 CNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMK-DKCDPN 515
Query: 185 LLALNSLINAFGEDRRDPEA---FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ N ++ +G + EA F + KE L P+ TY+ +++A R ++
Sbjct: 516 IGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEH 575
Query: 242 VYEEMVSSGCTPDR-KARAMLRSALRYMRQTL 272
VY+ MV SG D+ K +ML A R + +L
Sbjct: 576 VYQTMVLSGYQMDQTKHASMLIEASRAGKWSL 607
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 53/291 (18%)
Query: 10 RHFYNVMIDTFGKFNCLDHAMATFERMLSE-EIRPDTVTWNTLIDCHCKAGY-------- 60
R Y ++ G A+ F +ML + ++ PD ++ + +AG
Sbjct: 255 RFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVI 314
Query: 61 ---HDRAEELFQEMQQKGYSPCV----LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLP 113
+ +L + ++QK + P + + YN ++N+ +W VS + ++ GL P
Sbjct: 315 ERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRP 374
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
N T+ ++V +SG+F+ + +KS G P Y L+ A + G ++AV A
Sbjct: 375 NGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAV 434
Query: 174 RKMTAEGL------------------------------------KPSLLALNSLINAFGE 197
R M +G+ +P + LI A
Sbjct: 435 RDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLN 494
Query: 198 DRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
+ A+ QYMK+ P++ T ++K R D F + ++EE+VS
Sbjct: 495 GGHVDDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEAKELFEEIVS 544
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 86 MINSMGAQEKWDQVSDLLTRMQS---QGLLPNAVTFTTLVDVYGKSGRFNDALECL-EVL 141
+++ +G ++ W Q S ++ + S + L + +T L+ V G + R +AL+ ++L
Sbjct: 223 IVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQML 282
Query: 142 KSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG---------------LKPSLL 186
P Y+ + Q GL + + +M + L+P L+
Sbjct: 283 GDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLV 342
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+++NA + V +++N L+P+ TY M+ ++ KF +V + +M
Sbjct: 343 VYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKM 402
Query: 247 VSSGCTPDRKARAMLRSAL 265
SSG P +L AL
Sbjct: 403 KSSGEAPKAITYKVLVRAL 421
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ D ++ ++D +GK C+D A F+++ + D V+W ++ID + K+
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKSSRWREG 303
Query: 65 EELFQEMQQKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTL 121
LF E+ P T+ ++N+ + +E QV +TR+ G P + ++L
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV---GFDPYSFASSSL 360
Query: 122 VDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
VD+Y K G A ++ KP + +LI AQ G D+A+ F + G
Sbjct: 361 VDMYTKCGNIESAKHVVDGCP----KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 182 KPSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
KP + ++++A G + E F + +++ L YT L+ L R +F +
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSI--TEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 239 VPAVYEEM 246
+ +V EM
Sbjct: 475 LKSVISEM 482
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
++++G P +N ++ + K L A F+ M + D +WN +++ + + G
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGL 166
Query: 61 HDRAEELFQEMQQK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS-QGLLPNAVTF 118
+ A +LF EM +K YS + M+ +++ ++ L + MQ PN T
Sbjct: 167 LEEARKLFDEMTEKDSYS-----WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV 221
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+ V E + G ++++L++ Y + G D+A N F K+
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-- 279
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
++ +++ S+I+ + + R E F++ + + +P+ T+ ++ A
Sbjct: 280 --VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA 328
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 99 VSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
+ ++ +M+++G AV + D K GR ++ALE +K P + A++
Sbjct: 184 LQEIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGED-RRDPEAFAVLQYMKENDLQ 217
AYA G + + + F +M A G+ P+ + LI D + +A L M N +
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS 300
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRYMR 269
P+ TYT + +A +R K + +EM G PD KA +R AL Y R
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKA---VREALEYKR 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
M D K A+ F ++ + PD V +++ + AG ++F M G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 76 YSPCVLTYNIMINSMGAQEKWDQ-VSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
SP TY+++I + A K + L M G+ PNA T+T + + + + G+ A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 135 LECLEVLKSMGFKP 148
E L+ +K GF P
Sbjct: 323 RELLQEMKGKGFVP 336
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
Y + + FG LD + + +I+P+ T+N+++ + G + E +++EM+
Sbjct: 217 YKMYREVFG----LDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREME 272
Query: 73 QK-GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
++ G SP V +YN+++ + A+ + + M+ +G++ + V + T++ G F
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIG--GLCSNF 330
Query: 132 NDALECLEVLKSMGFKP---TPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLAL 188
+ ++ E+ + MG K T Y L+N Y + G D + +R+M +G + L +
Sbjct: 331 -EVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI 389
Query: 189 NSLINAFGEDR---RDPEAFAVLQ-YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+L+ +DR R EA +++ ++E P Y L+K L K + +
Sbjct: 390 EALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQA 449
Query: 245 EMVSSGCTPDRK 256
EMV G P ++
Sbjct: 450 EMVGKGFKPSQE 461
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G P+ + YNV+++ + + A +E M + D V +NT+I C +A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ELF++M KG LTY ++N D + M+ +G + +T LV+
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 125 YGKSGRFNDALECLEVLK----SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+E +++K F P+ Y L+ + G D+A+N +M +G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 181 LKPSLLALNSLINAFG 196
KPS + I+ +G
Sbjct: 456 FKPSQETYRAFIDGYG 471
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSM----GAQEKW---------DQVSDLLTRMQS 108
D A + ++++ +G + + T N +I + GA + D VS +
Sbjct: 179 DGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMI 238
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECL--EVLKSMGFKPTPTMYNALINAYAQRGLS 166
+ PNA TF +++ + + G + +E + E+ + +G P YN L+ AY RGL
Sbjct: 239 GKIKPNATTFNSMMVSFYREGE-TEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLM 297
Query: 167 DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+A + +M G+ ++A N++I + +A + + M ++ +TY L
Sbjct: 298 SEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 227 MKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ + VY EM G D
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKGFEAD 385
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N MI F K +D A F+ M + + V+WN++I + G A ++F+EMQ
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEM----PQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 73 QKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSG 129
+K P T ++N+ +GA E+ + + + R + + N++ T L+D+Y K G
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFE---LNSIVVTALIDMYCKCG 307
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
+ L E K + +N++I A G ++A++ F ++ GL+P ++
Sbjct: 308 CIEEGLNVFECAP----KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 190 SLINAF---GEDRRDPEAFAVL--QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
++ A GE R E F ++ +YM ++P + YT ++ L + A+ +
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYM----IEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 245 EM 246
M
Sbjct: 420 NM 421
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 98/273 (35%), Gaps = 74/273 (27%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ D N M+ + CL A F M I D V WN++I K G D+A
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
+ LF EM Q+ N V++ +++
Sbjct: 212 QNLFDEMPQR---------------------------------------NGVSWNSMISG 232
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQA--------------- 169
+ ++GRF DAL+ ++ KP +L+NA A G S+Q
Sbjct: 233 FVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELN 292
Query: 170 ---VNAFRKM------TAEGL-------KPSLLALNSLINAFGEDRRDPEAFAVLQYMKE 213
V A M EGL K L NS+I + + A + ++
Sbjct: 293 SIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELER 352
Query: 214 NDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ L+PD V++ ++ A + H+ + M
Sbjct: 353 SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K +G +PD Y ++I K +D AM + M PDT+ +N L+D KA
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +LF++M Q+G TYNI+I+ + + + L ++ +G +A+TF+
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+ + G+ A++ +E +++ GF ++L+ + ++G D + +
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGN 494
Query: 181 LKPSLLALNSLINA 194
L P++L N+ + A
Sbjct: 495 LVPNVLRWNAGVEA 508
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERM------LSEEIRPDTVTWNTLIDCHCKAGYHD 62
D YN+ I FG + LD A++ F+ M PD T+N+LI C G
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 63 RAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A ++ E++ G+ P TY I+I + D + MQ G +P+ + + L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALI-----NAYAQRGLS----------- 166
D K+ + +A + E + G + + YN LI N A+ G +
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 167 -------------------DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV 207
+ AV +M G L+ ++SL+ F + R +
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 208 LQYMKENDLQPDVVTYTTLMKALIR 232
+++++E +L P+V+ + ++A ++
Sbjct: 487 MKHIREGNLVPNVLRWNAGVEASLK 511
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 32 TFERMLS-EEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG------YSPCVLTYN 84
FE++ + + DT ++N I G D A LF+EM+++ + P + TYN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 85 IMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM 144
+I+ + K + ++ G P+ T+ L+ KS R +DA+ ++
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Query: 145 GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
GF P +YN L++ + +A F KM EG++ S N LI+ + R
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 205 FAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
F + +K+ D +T++ + L R K + EEM + G + D
Sbjct: 414 FTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN M+ +F K A ++M D T+N +I K G D A + +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++G ++ YN +IN++G + D+ + L M+S G+ P+ V++ T+++V K+G+
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 133 DALECLEVLKSMGFKP 148
+A + L+ + G P
Sbjct: 753 EAYKYLKAMLDAGCLP 768
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 45 TVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT 104
+ T+N+++ K GY A + +M + + + TYN++I +G + D S +L
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 105 RMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG 164
R+ QG + V + TL++ GK+ R ++A + + +KS G P YN +I ++ G
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 165 LSDQAVNAFRKMTAEGLKPS 184
+A + M G P+
Sbjct: 750 KLKEAYKYLKAMLDAGCLPN 769
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N D YNV+I GK D A A +R+ + D V +NTLI+ KA
Sbjct: 656 MFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATR 715
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D A +LF M+ G +P V++YN MI K + L M G LPN VT T
Sbjct: 716 LDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DT 774
Query: 121 LVDVYGKS---GRFNDA 134
++D GK RF A
Sbjct: 775 ILDYLGKEMEKARFKKA 791
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ NG PD YN ++D K + A FE+M+ E +R T+N LID + G
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ LF ++++KG +T++I+ + + K + L+ M+++G + VT ++
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
L+ + K GR++ + ++ ++ P +NA + A +R
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKM 176
T+ +++ + K G F A L+ + YN +I + G +D A ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 177 TAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKF 236
T +G ++ N+LINA G+ R EA + +MK N + PDVV+Y T+++ + K
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 237 HKVPAVYEEMVSSGCTPDRKARAML 261
+ + M+ +GC P+ +L
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 40 EIRPDTV---TWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCV-LTYNIMINSMGAQEK 95
E +PD+ NT + + G A +LF+ G + TYN M++S +
Sbjct: 586 EAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGY 645
Query: 96 WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNA 155
+ +L +M + T+ ++ GK GR + A L+ L G MYN
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNT 705
Query: 156 LINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
LINA + D+A F M + G+ P +++ N++I + + EA+ L+ M +
Sbjct: 706 LINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Query: 216 LQPDVVTYTTL 226
P+ VT T L
Sbjct: 766 CLPNHVTDTIL 776
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKP-TPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T + +Y G + A + E+ MG T YN++++++ ++G A +M
Sbjct: 599 TFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFE 658
Query: 179 EGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHK 238
+ N +I G+ R A AVL + + D+V Y TL+ AL + + +
Sbjct: 659 NFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDE 718
Query: 239 VPAVYEEMVSSGCTPD 254
+++ M S+G PD
Sbjct: 719 ATQLFDHMKSNGINPD 734
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 15/244 (6%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD +N +I + K +D A+ F +M + + ++W T+I + +A + A +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQ 233
Query: 67 LFQEMQQKGYSPCVLTYNIMINS---MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
LF EMQ P ++ +++ +GA E+ + L + + + ++V L+D
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR---IRMDSVLGCVLID 290
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K G +ALE + +K K + + ALI+ YA G +A++ F +M G+KP
Sbjct: 291 MYAKCGEMEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+++ +++ A E + M+ + +L+P + Y ++ L R +
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 243 YEEM 246
+EM
Sbjct: 407 IQEM 410
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 8/195 (4%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+++ V+PD + + L+ + IR D+V LID + K G
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A E+F+ +++K V + +I+ + MQ G+ PN +TFT
Sbjct: 298 MEEALEVFKNIKKKS----VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 121 LVDVYGKSGRFNDA-LECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
++ +G + L + + KPT Y +++ + GL D+A ++M
Sbjct: 354 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP-- 411
Query: 180 GLKPSLLALNSLINA 194
LKP+ + +L+ A
Sbjct: 412 -LKPNAVIWGALLKA 425
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD +N+MI F + + ++ ++RML + T+ +L+ + +
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+ ++ + GY V N +INS + L R+ P+ V++ +++ Y
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYV 192
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K+G+ + A L + + M K + + +I+ Y Q ++ +A+ F +M ++P +
Sbjct: 193 KAGKMDIA---LTLFRKMAEKNAIS-WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+L + ++A + + + Y+ + ++ D V L+ + + + V++ +
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Query: 78 PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALEC 137
P +N+MI ++ ++ L RM NA TF +L+ F + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 138 LEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGE 197
+ +G++ N+LIN+YA G A F ++ +P ++ NS+I + +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVK 193
Query: 198 DRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
+ A + + M E + +++TT++ ++ D + ++ EM +S PD +
Sbjct: 194 AGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 258 RAMLRSA 264
A SA
Sbjct: 250 LANALSA 256
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 30 MATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINS 89
++ E + E + V+WNT+ID + ++G D+A ELF EM ++ ++++N M+ +
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN----IVSWNSMVKA 180
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
+ + + D+ +L RM + + V++T +VD K+G+ ++A + +
Sbjct: 181 LVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI--- 233
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+NA+I YAQ D+A F+ M + + N++I F +R +A +
Sbjct: 234 -ISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG 250
M E +V+++TT++ + + + V+ +M+ G
Sbjct: 289 RMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 8 PDRHF--YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
P+R + +I + K + A F+R+ S R + VTW ++ + ++ AE
Sbjct: 73 PERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAE 129
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
LFQEM ++ V+++N MI+ + D+ +L M + N V++ ++V
Sbjct: 130 MLFQEMPERN----VVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKAL 181
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+ GR ++A+ E + + + A+++ A+ G D+A F M + ++
Sbjct: 182 VQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNI 233
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
++ N++I + ++ R EA + Q M E D ++ T++ IR + +K +++
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDR 289
Query: 246 M 246
M
Sbjct: 290 M 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 17/254 (6%)
Query: 8 PDRHF--YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
P+R+ +N MI + + N +D A F+ M D +WNT+I + ++A
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKAC 284
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL-PNAVTFTTLVDV 124
LF M +K V+++ MI ++ ++ ++ ++M G + PN T+ +++
Sbjct: 285 GLFDRMPEKN----VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL--K 182
+ + +++ + + +AL+N Y++ G + A RKM GL +
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG----ELIAARKMFDNGLVCQ 396
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
L++ NS+I + EA + M+++ +P VTY L+ A K
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 243 YEEMVSSGCTPDRK 256
++++V P R+
Sbjct: 457 FKDLVRDESLPLRE 470
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 6 VQPDRHF--YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
V P+R F +N MI F + ++ A F+RM + + ++W T+I + + ++
Sbjct: 258 VMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEE 313
Query: 64 AEELFQEMQQKG-YSPCVLTYNIMIN------------------SMGAQEKWDQVSDLLT 104
A +F +M + G P V TY +++ S +K + V+ L
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 105 RMQSQ-------------GLL--PNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
M S+ GL+ + +++ +++ VY G +A+E ++ GFKP+
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y L+ A + GL ++ + F+ + + P
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG+ D + D +GK L+ A++ F ++ R ++V WNTLI CH G+ ++
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI----PRVNSVPWNTLIACHGFHGHGEK 535
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLV 122
A LF+EM +G P +T+ ++++ D+ MQ+ G+ P+ + +V
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSD 167
D+YG++G+ A L+ +KSM +P +++ AL++A G D
Sbjct: 596 DMYGRAGQLETA---LKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N ++ + K +D A A F + + D ++WNT+I + + G+ A E++ M++
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPN----TDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 74 KG-YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+G + T+ ++ + Q L R+ GL + T+L D+YGK GR
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
DAL + + P +N LI + G ++AV F++M EG+KP + +L+
Sbjct: 504 DALSLFYQIPRVNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 193 NAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGC 251
+A E + M+ + + P + Y ++ R + + M
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---SL 616
Query: 252 TPDRKARAMLRSALR 266
PD L SA R
Sbjct: 617 QPDASIWGALLSACR 631
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 51/302 (16%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G++ + N +ID + +F L F+RM D ++WN++I + R
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQPLR 331
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQ----------------EKW----DQVSDLL 103
A LFQEM+ P LT I + S+ +Q + W + + +
Sbjct: 332 AISLFQEMRLSRIQPDCLTL-ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 104 TRMQSQ-GL----------LPN--AVTFTTLVDVYGKSGRFNDALECLEVLKSMG-FKPT 149
M ++ GL LPN +++ T++ Y ++G ++A+E +++ G
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
+ +++ A +Q G Q + ++ GL + + SL + +G+ R +A ++
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 210 YMKENDLQPDVVTYTTLMKALIRVDKFH----KVPAVYEEMVSSGCTPDRKARAMLRSAL 265
+ + P LI FH K +++EM+ G PD L SA
Sbjct: 511 QIPRVNSVP--------WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 266 RY 267
+
Sbjct: 563 SH 564
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
D H + +I + K ++ A E++ E + V+W LI + + G +RA +LF
Sbjct: 244 DIHIWTTLISGYAKLGDMEAA----EKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKS 128
++M G P T++ + + + ++ M + PNA+ ++L+D+Y KS
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 129 GRFNDALECLE-VLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
G +LE E V + K +N +I+A AQ GL +A+ M ++P+
Sbjct: 360 G----SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
L ++NA E + M ++ + PD Y L+ L R F ++ EEM
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N M+ + K L A F+ M D V+WNT++ + + G A ++E +
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G ++ ++ + + ++ G L N V +++D Y K G+
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 133 DALECLE--VLKSMGFKPT-------------------------PTMYNALINAYAQRGL 165
A C + +K + T P + ALI Y ++G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTT 225
++A++ FRKM A G+KP +S + A + YM +++P+ + ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 226 LM 227
L+
Sbjct: 352 LI 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M + GV+P++ ++ + L H M+ +RP+ + ++LID + K+G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ +E +F+ K CV +N MI+++ + +L M + PN T
Sbjct: 362 LEASERVFRICDDK--HDCVF-WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 121 LVDVYGKSGRFNDALECLEVLK-SMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++ SG + L E + G P Y LI+ + G + + +M E
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++ D N ++D + K L A ++F+ +L RP + +WNTLI +CKAG D A
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL----RPSSTSWNTLISGYCKAGLMDEAV 193
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV- 124
LF M Q P V+++N +I+ + + + L RMQ +GL+ + +
Sbjct: 194 TLFHRMPQ----PNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 125 -YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+G L C V+KS G + +P +ALI+ Y+ G A + F + +
Sbjct: 249 SFGGLLTMGKQLHCC-VVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQ-EKLAVNS 305
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
S+ NS+++ F + + A +L + ++DL D T + +K I V+
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 244 EEMVSSGCTPDRKARAML 261
+V SG D ++L
Sbjct: 366 SLVVVSGYELDYIVGSIL 383
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 14/226 (6%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ + N +I + F L A F+ M I VTW T++ + G ++A
Sbjct: 35 GISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI----VTWTTMVSGYTSDGKPNKA 90
Query: 65 EELFQEM-QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
EL++ M + + Y+ ++ + G + R+ + L + V ++VD
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVD 150
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K+GR +A + + +P+ T +N LI+ Y + GL D+AV F +M +P
Sbjct: 151 MYVKNGRLIEANSSFKEI----LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP----QP 202
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
++++ N LI+ F D+ P A L M+ L D +KA
Sbjct: 203 NVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
+ VT L+D + K G D LF M ++ V+++ +I G + ++
Sbjct: 477 EPVTATALVDMYVKCGEIDNGVVLFDGMLERD----VVSWTGIIVGFGQNGRVEEAFRYF 532
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS-MGFKPTPTMYNALINAYAQ 162
+M + G+ PN VTF L+ SG +A LE +KS G +P Y +++ Q
Sbjct: 533 HKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQ 592
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVT 222
GL +A KM L+P SL+ A G + + + + + D
Sbjct: 593 AGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG-FPDDPSV 648
Query: 223 YTTLMKALIRVDKFHKVPAVYE 244
YT+L A + + ++ V E
Sbjct: 649 YTSLSNAYATLGMWDQLSKVRE 670
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK- 74
+I FG+ ++ A F +M++ I P+ VT+ L+ +G + A + M+ +
Sbjct: 515 IIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEY 574
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG---KSGRF 131
G P + Y +++ +G + + ++L+ +M L P+ +T+L+ G +G
Sbjct: 575 GLEPYLEHYYCVVDLLGQAGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNAGLV 631
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQ 168
E ++LK GF P++Y +L NAYA G+ DQ
Sbjct: 632 TVIAE--KLLK--GFPDDPSVYTSLSNAYATLGMWDQ 664
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 78 PCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALEC 137
P +TYN MI+ Q++ D +L M S+G P+ VTF+TL++ Y K+ R ++ +E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 138 LEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGE 197
+ G Y LI+ + Q G D A + +M + G+ P + + ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 198 DRRDPEAFAVLQYMKEND 215
+ +AFA+L+ +++++
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 36 MLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEK 95
ML I P T+T+N++ID CK D A+ + M KG SP V+T++ +IN ++
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 96 WDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNA 155
D ++ M +G++ N VT+TTL+ + + G + A + L + S G P ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 156 LINAYAQR 163
++ +
Sbjct: 121 MLAGLCSK 128
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
YN MID F K + +D A + M S+ PD VT++TLI+ +CKA D E+F EM
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++G +TY +I+ D DLL M S G+ P+ +TF ++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 133 DALECLEVLK 142
A LE L+
Sbjct: 133 KAFAILEDLQ 142
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 106 MQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGL 165
M + P +T+ +++D + K R +DA L+ + S G P ++ LIN Y +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 166 SDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTT 225
D + F +M G+ + + +LI+ F + A +L M + PD +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 226 LMKALIRVDKFHKVPAVYEEMVSS 249
++ L + K A+ E++ S
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKS 144
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 148 PTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV 207
PT YN++I+ + ++ D A M ++G P ++ ++LIN + + +R +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
M + + VTYTTL+ +V + EM+S G PD
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 114
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M S G PD ++ +I+ + K +D+ M F M I +TVT+ TLI C+ G
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 95
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQ 107
D A++L EM G +P +T++ M+ + ++++ + +L +Q
Sbjct: 96 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKA-GY 60
+S+G + +I + + + ++TF +ML P N ++D GY
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+A ELF+ + G P +YN+++ + + L +M + ++P+ ++
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+ + + G+ N A+E L+ + + GF P T LI +G+ D+ +M ++G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
P N L+ F + EA V++ + +N T+ ++ + D+ K+
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIK 346
Query: 241 AVYEEMVSSGCTPDRK 256
E+ V T D +
Sbjct: 347 LFLEDAVKEEITGDTR 362
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 64 AEELFQ-EMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
A+E+F QQ + ++ I+I +G ++ + D+L + +S G FT L+
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA-YAQRGLSDQAVNAFRKMTAEGL 181
VY ++ L + F P P N +++ + RG +A F+ G+
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
P+ + N L+ AF + A+ + M E D+ PDV +Y L++ R + +
Sbjct: 187 MPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 242 VYEEMVSSGCTPDR 255
+ ++M++ G PDR
Sbjct: 247 LLDDMLNKGFVPDR 260
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 30 MATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINS 89
M F M + +TVT+ TLI +AG D A+E+F+EM G P ++TYNI+++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD- 59
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
GL N LV +G+ D + L G KP
Sbjct: 60 --------------------GLCKNGKLEKALV-----AGKVEDGWDLFCSLSLKGVKPN 94
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQ 209
Y +I+ + ++G ++A FRKM +G P N+LI A D + +++
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 210 YMKENDLQPDVVTYTTLMKAL--IRVDK 235
M+ D TY + L R+DK
Sbjct: 155 EMRSCRFAGDASTYGLVTDMLHDGRLDK 182
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ + Y +I + D A F+ M+S+ + PD +T+N L+D CK G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 61 HDRA---------EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGL 111
++A +LF + KG P V+TY MI+ + ++ L +M+ G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 112 LPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
LP++ T+ TL+ + + G + E ++ ++S F + Y + +
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 49 NTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLT--RM 106
N+++D +C+ GY A+ F EM+ K ++T+N +I+ + E+ D LL R
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKD----LITWNTLISEL---ERSDSSEALLMFQRF 304
Query: 107 QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS 166
+SQG +PN TFT+LV N + + GF + NALI+ YA+ G
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNI 364
Query: 167 DQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTL 226
+ F ++ + +L++ S++ +G EA + M + ++PD + + +
Sbjct: 365 PDSQRVFGEIVD---RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 227 MKALIRVDKFHKVPAVYEEMVSS-GCTPDR 255
+ A K + M S G PDR
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G Q + N ++D + + L A F M + D +TWNTLI + D +
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK----DLITWNTLIS---ELERSDSS 295
Query: 65 EEL--FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLV 122
E L FQ + +G+ P T+ ++ + + L R+ +G N L+
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
D+Y K G D+ V + + + +++ Y G +AV F KM + G++
Sbjct: 356 DMYAKCGNIPDS---QRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 183 PSLLALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKV 239
P + ++++A G + + F V++ E + PD Y ++ L R K +
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVME--SEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 240 PAVYEEM 246
+ E M
Sbjct: 471 YELVERM 477
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G + N +ID + K + + F ++ R + V+W +++ + GY A
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD---RRNLVSWTSMMIGYGSHGYGAEA 399
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLVD 123
ELF +M G P + + ++++ ++ M+S+ G+ P+ + +VD
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
+ G++G+ +A E +E M FKP + + A++ A
Sbjct: 460 LLGRAGKIGEAYELVE---RMPFKPDESTWGAILGA 492
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 25/262 (9%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G D N +ID +GK L+ A + FE M D TWN+++ H G HD
Sbjct: 292 GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER----DLFTWNSVLCVHDYCGDHDGT 347
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLL----PNAVTFTT 120
LF+ M G P ++T ++ + G Q ++ M GLL N +
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
L+D+Y K G DA V SM K + + +N +IN Y + + A++ F M G
Sbjct: 408 LMDMYVKCGDLRDA---RMVFDSMRVKDSAS-WNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKE-NDLQPDVVTYTTLMKALIRVDKFHKV 239
+KP + L+ A E L M+ ++ P Y ++ L R DK +
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 240 ------------PAVYEEMVSS 249
P V+ ++SS
Sbjct: 524 YELAISKPICDNPVVWRSILSS 545
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 20/257 (7%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLI------DCHCK 57
G + D YN +I F AM T+ M + I PD T+ +L+ +
Sbjct: 120 GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV 179
Query: 58 AGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
H A +L + S V +Y+ ++ AQ+ +D++ D ++V
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR----------DDSVL 229
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
+ LV+ Y + RF DAL ++ G + ++++A+ G D +
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
G ++ N+LI+ +G+ + EA ++ + M E DL T+ +++
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL----FTWNSVLCVHDYCGDHD 345
Query: 238 KVPAVYEEMVSSGCTPD 254
A++E M+ SG PD
Sbjct: 346 GTLALFERMLCSGIRPD 362
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 27/242 (11%)
Query: 8 PDRHFY--NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
PDR VMI+ + + + A+ F+ + +I+ DTV W +ID + ++A
Sbjct: 185 PDRDHVAATVMINCYSECGFIKEALELFQDV---KIK-DTVCWTAMIDGLVRNKEMNKAL 240
Query: 66 ELFQEMQQKGYSP------CVLTYNIMINSMGAQE--KWDQVSDLLTRMQSQGLLPNAVT 117
ELF+EMQ + S CVL+ + +GA E +W RM+ + NA
Sbjct: 241 ELFREMQMENVSANEFTAVCVLS---ACSDLGALELGRWVHSFVENQRMELSNFVGNA-- 295
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
L+++Y + G N+A V++ YN +I+ A G S +A+N FR M
Sbjct: 296 ---LINMYSRCGDINEARRVFRVMRD----KDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN-DLQPDVVTYTTLMKALIRVDKF 236
G +P+ + L +L+NA V MK +++P + Y ++ L RV +
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRL 408
Query: 237 HK 238
+
Sbjct: 409 EE 410
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 33 FERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMI--NSM 90
F+ M + DT +N +I CKAG D A +F + G P V TYN+MI +S+
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL 61
Query: 91 GAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTP 150
G EK L M +GL+P+ +T+ +++ K + A + +
Sbjct: 62 GRAEK------LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSC 106
Query: 151 TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQY 210
+ +N LIN Y + +N F +M G+ +++ +LI+ F + A + Q
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 211 MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY---EEMVSSGCT 252
M N + +T+ ++ L + K A+ MVS+ T
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNVT 211
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G+QPD YN+MI +F+ L A + M+ + PDT+T+N++I CK
Sbjct: 43 SGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN---- 94
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+ Q + S T+N +IN + +L M +G++ N +T+TTL+
Sbjct: 95 -----KLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIH 149
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+ + G FN AL+ + + S G + + ++ R RK A L+
Sbjct: 150 GFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSR-------KELRKAVAMLLQK 202
Query: 184 SLLALNSL 191
S + N++
Sbjct: 203 SSMVSNNV 210
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
+F+ M++ YNI+I+ + K+D+ ++ T + GL P+ T+ ++ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
GR A + + G P YN++I+ ++ QA RK++ S
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVS-----KSCS 107
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
N+LIN + + R + + M + +V+TYTTL+ +V F+ +++EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 247 VSSG 250
VS+G
Sbjct: 168 VSNG 171
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 14/257 (5%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
++PD YN +++ + + A +++ +P VT+ +++ ++
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 66 ELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVY 125
E F++MQ K P L Y +++N++ + K D+ + M+S+G++ +A + L
Sbjct: 649 EFFRKMQ-KSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
+GR N+ L L+ + + KP Y LI A G A F +M + P+L
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM-KKVCSPNL 766
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKEN--------DLQ----PDVVTYTTLMKALIRV 233
+ N ++ A+ + EA + Q M E+ D + PD T+ T++
Sbjct: 767 VTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQ 826
Query: 234 DKFHKVPAVYEEMVSSG 250
+K+ Y EM+ G
Sbjct: 827 EKWDDFGYAYREMLRHG 843
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 83 YNIM--INSMGAQEKWDQVSDLLTRMQSQGLLPN---AVTFTTLVDVYGKSGRFNDALEC 137
Y +M I+ +G W +V ++ +Q Q + + +TT ++V GKS R +AL
Sbjct: 470 YTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNV 529
Query: 138 LE-VLKSMGFKPTPTMYNALINAYAQRG-----------LSDQAVNAFRKMTAEG----L 181
+L + P Y ++ Q G + F+ T E L
Sbjct: 530 FHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRL 589
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+P ++ N+++NA + ++ AF VLQ +K+ +P VTY +M+ ++ +K++ V
Sbjct: 590 EPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHE 649
Query: 242 VYEEMVSSG 250
+ +M S
Sbjct: 650 FFRKMQKSS 658
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MKSNGV PD N++I + K +D A+ F+ M P+ T++ L+ C+ G
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ ++EMQ KG P Y ++I S+ + + D+ +++ M + L P+ +T+ T
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 121 LVDVYGKSGRFNDALECLEVLK 142
++ + GR ++ALE +E K
Sbjct: 334 VLTELCRGGRGSEALEMVEEWK 355
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 99 VSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALIN 158
V L +M+S G++P+ ++ Y K ++A+ + + G +P Y+ L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
++G Q + +++M +G+ P+ LI + +RR EA V+ M N L P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEE 245
D++TY T++ L R + + + EE
Sbjct: 327 DMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 24/241 (9%)
Query: 12 FYNVMIDTFGKFNC-----LDHAMATFERML-SEEIRPDTVTW-----------NTLIDC 54
YN +I +F C + A + +ML S++ +PD T+ N L C
Sbjct: 145 LYNCII----RFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVC 200
Query: 55 HCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPN 114
+ Y L ++M+ G P N++I + + D+ + M G PN
Sbjct: 201 YV---YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPN 257
Query: 115 AVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFR 174
A T++ LV + GR L + ++ G P + Y LI + + D+AV
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 175 KMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
M A L P +L N+++ R EA +++ K+ D Y TLM + ++
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLN 377
Query: 235 K 235
K
Sbjct: 378 K 378
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 14/219 (6%)
Query: 48 WNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMIN-SMGAQEKWDQVSDLLTRM 106
++T+I ++ E L +E+ V YN +I G + +++ D+ +M
Sbjct: 111 YHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKM 170
Query: 107 -QSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL----------KSMGFKPTPTMYNA 155
+S P+ T+T L+ K RFN C L KS G P + N
Sbjct: 171 LRSDDSKPDLETYTLLLSSLLK--RFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNM 228
Query: 156 LINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND 215
+I AYA+ D+A+ F++M G +P+ + L+ E R + + M+
Sbjct: 229 IIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKG 288
Query: 216 LQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
+ P+ Y L+ +L + + V +M+++ +PD
Sbjct: 289 MVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 12/250 (4%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD Y MI+ K L AM + M PD N +ID C A E
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG--LLPNAVTFTTLVDV 124
+F+E+ +KG P V+TYN ++ + + ++V +L+ M+ +G PN VTF+ L+
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
S R D LE + + T +YN + Y Q ++ + +M GL P
Sbjct: 399 ---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPD 455
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
I+ + EA + Q M + P+ T L + + P V +
Sbjct: 456 QRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTK-------PRVED 508
Query: 245 EMVSSGCTPD 254
+M+ S T +
Sbjct: 509 KMLRSNLTSE 518
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
YN ++D GK + F+ M + + T+ L++ + A D A +F+
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRF 131
++ G ++ ++ ++ + + K + ++ L + + + +++ + G
Sbjct: 205 KEFGIDDDLVAFHGLLMWL-CRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
++A + + + +P Y +INA ++G +A+ +R M P + N++
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 192 INAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSG- 250
I+A +R PEA V + + E P+VVTY +L+K L ++ + KV + EEM G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 251 -CTPD 254
C+P+
Sbjct: 384 SCSPN 388
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 41 IRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVS 100
I+P ++ +I C+ A+ L +M KG +P +N+++++ D+
Sbjct: 372 IKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 427
Query: 101 DLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAY 160
++L M+S+GL P+ T+T ++ Y K G ++A E L K K +P Y+ALI Y
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 161 AQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVL-QYMKENDLQPD 219
+ D+A+ +M G++P+ N LI +F D E VL + MK+ L +
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Query: 220 VVTYTTLMKALIRVDKFHKV 239
++ L++A+ ++ KV
Sbjct: 548 AIS-QGLIRAVKEMESEAKV 566
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 7/277 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEE--IRPDTVTWNTLIDCHCKA 58
M +GV + +I F K + A + +E ++E + P V TLI CK
Sbjct: 292 MLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKN 349
Query: 59 -GYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVT 117
G A+E+ ++ + + ++ +I+S+ LL M S+G P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 118 FTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMT 177
F +V K+G ++A E L++++S G KP Y +I+ YA+ G+ D+A +
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL-IRVDKF 236
+ K S + ++LI + + EA +L M +QP+ Y L+++ ++ +
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW 529
Query: 237 HKVPAVYEEMVSSGCTPDRKARAMLRSALRYMRQTLK 273
K ++EEM G + ++ ++R A++ M K
Sbjct: 530 EKAEVLFEEMKQKGLHLNAISQGLIR-AVKEMESEAK 565
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 51/263 (19%)
Query: 49 NTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS 108
N LI K G A ++F + ++ G++P TY + + ++ + D + +M
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 109 QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA--------- 159
G+L ++ + K G+ +A E+ K+ P LI A
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 160 YAQRGLSDQAVNAFRK---------------------------MTAEGLKPSLLALNSLI 192
+AQ L D + A R+ M ++G P N ++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 193 NAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA-------------LIRVDKFHK- 238
+A + EA VL+ M+ L+PDV TYT ++ L K HK
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 239 -VPAVYEEMVSSGCTPDRKARAM 260
P Y ++ C + A+
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEAL 497
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 90 MGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPT 149
M A WD V ++ + +S G+L N L+ ++GK G+ A + + GF P
Sbjct: 208 MDAYGLWDLVKEIGEK-ESCGVL-NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPN 265
Query: 150 PTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAV-- 207
Y + A +R D A + KM G+ + ++I F ++ + EA++V
Sbjct: 266 AKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYE 325
Query: 208 LQYMKENDLQPDVVTYTTLMKALIRVD 234
L KE L P V TL+ AL + D
Sbjct: 326 LAKTKEKSLPPRFV--ATLITALCKND 350
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPD--TVTWNTLIDCHCKAGYHDRAEELFQEM 71
++++ KF + + F +M E R +N L+ C A +F+++
Sbjct: 143 SILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL 202
Query: 72 QQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL--TRMQSQGLLPNAVTFTTLVDVYGKSG 129
+ ++P V T NI++ +G +E D + L M +G PN+VT+ +D + K
Sbjct: 203 HSR-FNPDVKTMNILL--LGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKR 259
Query: 130 RFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALN 189
F +AL E + + F T + LI+ +A F +++ GL P A N
Sbjct: 260 NFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYN 319
Query: 190 SLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDK--FHKVPAVYEEMV 247
+L+++ + A V++ M+E ++PD VT+ ++ +++ + F+ V Y++M
Sbjct: 320 ALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMK 379
Query: 248 SSGCTPDRKARAML 261
P ML
Sbjct: 380 ERSLVPKTPTIVML 393
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N+++ F + A + FE++ S PD T N L+ +AG E + EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
++G+ P +TY I I+ + + + L M TTL+ G +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLI 192
A + + + G P YNAL+++ + G A+ ++M +G++P + +S+
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 193 NAFGEDRRDPEAF-AVLQY---MKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
G + F V +Y MKE L P T LMK + + +++ M+
Sbjct: 358 --IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 249 SGCTPDRKARAMLRSAL 265
G P A +L +AL
Sbjct: 416 KGYCPHGHALELLTTAL 432
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 2/225 (0%)
Query: 8 PDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEEL 67
PD N+++ F + + + M+ +P++VT+ ID CK A L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
F++M + + V +I+ G + L + +GL P+ + L+ K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 128 SGRFNDALECLEVLKSMGFKP-TPTMYNALINAYAQRGLSDQAV-NAFRKMTAEGLKPSL 185
G + A++ ++ ++ G +P + T ++ I + V ++KM L P
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT 387
Query: 186 LALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKAL 230
+ L+ F + + +YM E P L AL
Sbjct: 388 PTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTAL 432
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
DT +N L+ C+ A ++ ++ + + P + T+NI+++ + E +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSE---EAEAFF 234
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
M+ +GL P+ VT+ +L+DVY K A + ++ ++ P Y +I
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G D+A ++M G P + A N+ I F RR +A ++ M + L P+ TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 224 TTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
+ L + + +Y M+ + C P+ ++
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQS 388
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G++PD YN +ID + K ++ A ++M EE PD +T+ T+I G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
D+A E+ +EM++ G P V YN I + + L+ M +GL PNA T+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNA--LINAYAQRGLSDQAVNAFRKMTA 178
V + + E ++ +G + P + LI + + D A+ + M
Sbjct: 357 FFRVLSLANDLGRSWEL--YVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 179 EGL 181
+G
Sbjct: 415 KGF 417
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
QPD +N+++ + + A A FE M + ++PD VT+N+LID +CK ++A +
Sbjct: 211 QPDLQTFNILL---SGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYK 267
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
L +M+++ +P V+TY +I +G + D+ ++L M+ G P+ + + +
Sbjct: 268 LIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYN 154
+ R DA + ++ + G P T YN
Sbjct: 328 IARRLGDADKLVDEMVKKGLSPNATTYN 355
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLL--TRMQSQGLL-PNAV-------------- 116
+G+ + + M+ +G K+DQ+ +LL T+ + + L+ P +
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVR 161
Query: 117 -------TFTTLVDVYGKSGRFNDALECLEVLKSMG------------FKPTPTMYNALI 157
F LV + + FN L L KSM F+P +N L+
Sbjct: 162 QTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILL 221
Query: 158 NAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQ 217
+ + S++A F +M +GLKP ++ NSLI+ + +DR +A+ ++ M+E +
Sbjct: 222 SGWKS---SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET 278
Query: 218 PDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKA 257
PDV+TYTT++ L + + K V +EM GC PD A
Sbjct: 279 PDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 124/280 (44%), Gaps = 27/280 (9%)
Query: 6 VQPDRH--FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+ P+R +N MI + + + A + F++M D ++WNT+++ + G +
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEA 139
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG-LLPNAVTFTTLV 122
E +F +M ++ V ++N +I + +V RM +G ++PN T T ++
Sbjct: 140 CERVFDDMPERN----VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 123 DVYGKSGRFNDALECLEVLKSMGF-KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGL 181
K G F+ + +++G+ K + NALI+ Y + G + A+ F+ +
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK---- 251
Query: 182 KPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPA 241
+ L++ N++IN EA + MK + + PD VT+ ++ A + A
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLA 311
Query: 242 VYEEMVSS----------GCTPDRKARA-MLRSALRYMRQ 270
+ M + GC D +RA L A+ ++ +
Sbjct: 312 YFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+ D + N +ID +GK ++ AM F+ + R D ++WNT+I+ G+ A
Sbjct: 221 KVDVNVKNALIDMYGKCGAIEIAMEVFKGIK----RRDLISWNTMINGLAAHGHGTEALN 276
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ----GLLPNAVTFTTLV 122
LF EM+ G SP +T+ + + A + V D L S ++P +V
Sbjct: 277 LFHEMKNSGISPDKVTF---VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA---YAQRGLSDQAVNAFRKMTAE 179
D+ ++G A +E + M K ++ L+ A Y + + + A+ K+ E
Sbjct: 334 DLLSRAGFLTQA---VEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL--E 388
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
P+ + L N +G+ R +A + M++ + +
Sbjct: 389 PRNPANFVM--LSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 108/272 (39%), Gaps = 48/272 (17%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M N +Q D N +I + K LD+A A F+ M SE+ D+VT+ +I + G
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM-SEK---DSVTYGAIISGYMAHGL 315
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF-- 118
A LF EM+ G S T+N MI+ + ++V + M G PN VT
Sbjct: 316 VKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 119 ---------------------------------TTLVDVYGKSGRFNDALECLEVLKSMG 145
T+++D Y K G A + K
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK--- 428
Query: 146 FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAF 205
+ + A+I AYA G SD A + F +M G KP + L ++++AF A
Sbjct: 429 -DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQ 487
Query: 206 AVLQYM-KENDLQPDVVTYTTLMKALIRVDKF 236
+ M + D++P V Y ++ L R K
Sbjct: 488 HIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 19/229 (8%)
Query: 43 PDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDL 102
D N +I + K + A ++F EM ++ V+++N MI+ ++ +
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERD----VVSWNSMISGYSQSGSFEDCKKM 220
Query: 103 LTRMQS-QGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSM---GFKPTPTMYNALIN 158
M + PN VT ++ V+ G+ +D + LEV K M + ++ NA+I
Sbjct: 221 YKAMLACSDFKPNGVT---VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 159 AYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQP 218
YA+ G D A F +M+ + + ++I+ + EA A+ M+ L
Sbjct: 278 FYAKCGSLDYARALFDEMS----EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS- 332
Query: 219 DVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPDRKARAMLRSALRY 267
T+ ++ L++ + +V + EM+ G P+ + L +L Y
Sbjct: 333 ---TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G + N +ID + K L+ F++M I TWN+++ K G+ D
Sbjct: 49 SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVVTGLTKLGFLDE 104
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
A+ LF+ M ++ C T+N M++ ++ ++ M +G + N +F +++
Sbjct: 105 ADSLFRSMPER--DQC--TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
N ++ ++ F + +AL++ Y++ G + A F +M
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG----DR 216
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
++++ NSLI F ++ EA V Q M E+ ++PD VT +++ A
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G + D N +ID + K C++ F +M+ D V+WN +I + GY +
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNE 476
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQ-GLLPNAVTFTTLV 122
A ELF+EM + G P +T ++++ G ++ + M G+ P +T +V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 123 DVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINA 159
D+ G++G +A +E M +P ++ +L+ A
Sbjct: 537 DLLGRAGFLEEAKSMIE---EMPMQPDSVIWGSLLAA 570
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
D + + ++D + K ++ A F+ M + V+WN+LI C + G A ++F
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV----VSWNSLITCFEQNGPAVEALDVF 241
Query: 69 QEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFT-TLVDVYGK 127
Q M + P +T +I++ + ++ R+ L N + + VD+Y K
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLA 187
R +A + SM + ++I+ YA + A F KM + ++++
Sbjct: 302 CSRIKEARF---IFDSMPIRNV-IAETSMISGYAMAASTKAARLMFTKMA----ERNVVS 353
Query: 188 LNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFH 237
N+LI + ++ + EA ++ +K + P ++ ++KA + + H
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
+K G+ D N +I + K CL + F+RM + D+V++N++ID + K G
Sbjct: 147 LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM----PKRDSVSYNSMIDGYVKCGL 202
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMG-AQEKWDQVSDLLTRMQSQGLLPNAVTFT 119
A ELF M + + ++++N MI+ + D S L M + L +++
Sbjct: 203 IVSARELFDLMPMEMKN--LISWNSMISGYAQTSDGVDIASKLFADMPEKDL----ISWN 256
Query: 120 TLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAE 179
+++D Y K GR DA +V+ + + +I+ YA+ G A F +M
Sbjct: 257 SMIDGYVKHGRIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 180 GLKPSLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHK 238
++A NS++ + +++ EA + M KE+ L PD T ++ A+ ++ + K
Sbjct: 313 ----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N MID + K ++ A F+ M R D VTW T+ID + K G+ A+ LF +M
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVM----PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG-LLPNAVTFTTLVDVYGKSGRF 131
+ V+ YN M+ + + ++ + M+ + LLP+ T ++ + GR
Sbjct: 311 HRD----VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 132 NDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK-PSLLALNS 190
+ A++ + F + ALI+ Y++ G A+ F EG++ S+ N+
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF-----EGIENKSIDHWNA 421
Query: 191 LINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKA 229
+I AF +L ++ L+PD +T+ ++ A
Sbjct: 422 MIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNA 460
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 15 VMIDTFGKFNCLDHAMATF----------ERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
++ FG+ N + +++ F ++ E D ++WN++I+ + G ++
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF-TTLVD 123
+F +M G + T + + + A + + + + + F TL+D
Sbjct: 281 LSVFVQMLVSGIEIDLATI-VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+Y K G + A V + M + + Y ++I YA+ GL+ +AV F +M EG+ P
Sbjct: 340 MYSKCGDLDSAKA---VFREMSDRSVVS-YTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVY 243
+ + +++N R E V +++KENDL D+ LM + + V+
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 244 EEM 246
EM
Sbjct: 456 SEM 458
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 101/283 (35%), Gaps = 45/283 (15%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ G+ PD + +++ ++ LD E + ++ D N L+D + K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 61 HDRAEELFQEM--------------------------------QQKGYSPCVLTYNIMIN 88
AE +F EM ++K +SP T ++
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 89 SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKP 148
+ + +D+ ++ + G + +LVD+Y K G +L M F
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL--------LLAHMLFDD 559
Query: 149 TPTM----YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEA 204
+ + +I Y G +A+ F +M G++ ++ SL+ A E
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 205 FAVLQYMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEM 246
+ M+ E ++P V Y ++ L R K E M
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 111/244 (45%), Gaps = 19/244 (7%)
Query: 11 HFY--NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELF 68
H Y ++D + +F C+D+A F M +R + V+W+ +I C+ K G A F
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGM---PVR-NVVSWSAMIACYAKNGKAFEALRTF 271
Query: 69 QEM--QQKGYSPCVLTYNIMIN---SMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+EM + K SP +T ++ S+ A E+ + + R +LP + LV
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP---VISALVT 328
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
+YG+ G+ + + +N+LI++Y G +A+ F +M A G P
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDV----VSWNSLISSYGVHGYGKKAIQIFEEMLANGASP 384
Query: 184 SLLALNSLINAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
+ + S++ A + E + + M +++ ++P + Y ++ L R ++ + +
Sbjct: 385 TPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM 444
Query: 243 YEEM 246
++M
Sbjct: 445 VQDM 448
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
+ ++ +G+ L+ F+RM D V+WN+LI + GY +A ++F+EM
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDR----DVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRM-QSQGLLPNAVTFTTLVDVYGKSGRFN 132
G SP +T+ ++ + + ++ L M + G+ P + +VD+ G++ R +
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 133 DALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
+A ++++ M +P P ++ +L+ + G + A A R++ A
Sbjct: 440 EA---AKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA 482
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 67/298 (22%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
NG D +I + +D+A F++ I WN L AG+ +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTI----YVWNALFRALTLAGHGEE 161
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQE-------KWDQVSDLLTRMQSQGLLPNAV 116
L+ +M + G TY ++ + A E K ++ LTR +G +
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR---RGYSSHVY 218
Query: 117 TFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTM----YNALINAYAQRGLSDQAVNA 172
TTLVD+Y + G + A S F P ++A+I YA+ G + +A+
Sbjct: 219 IMTTLVDMYARFGCVDYA--------SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 173 FRKMTAE-------------------------------------GLKPSLLALNSLINAF 195
FR+M E GL L +++L+ +
Sbjct: 271 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 196 GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTP 253
G + V M + DVV++ +L+ + K ++EEM+++G +P
Sbjct: 331 GRCGKLEVGQRVFDRMHDR----DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASP 384
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%)
Query: 21 GKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCV 80
GK N A+ T M I P + + TLID + +G D+A+E+F+EM KG P V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 81 LTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEV 140
TYN MI + ++ + LL M+S+G PN V ++TLV K+G+ ++A + ++
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 141 LKSMG 145
+ G
Sbjct: 820 MVKKG 824
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 126 GKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSL 185
GK + AL L +K +G P+ Y LI+ Y G D+A FR+MT +G P++
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 186 LALNSLINAF---GEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAV 242
NS+I GE R EA +L+ M+ P+ V Y+TL+ L + K + V
Sbjct: 760 FTYNSMIRGLCMAGEFR---EACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKV 816
Query: 243 YEEMVSSG 250
+EMV G
Sbjct: 817 IKEMVKKG 824
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%)
Query: 68 FQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGK 127
M++ G P VL Y +I+ + D+ ++ M +G LPN T+ +++
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 128 SGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
+G F +A L+ ++S G P +Y+ L+ + G +A ++M +G
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
MK G+ P Y +ID + LD A F M + P+ T+N++I C AG
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQG 110
A L +EM+ +G +P + Y+ ++ + K + ++ M +G
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 103 LTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQ 162
L M+ G+ P+ + +TTL+D Y SG + A E + G P YN++I
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 163 RGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYM 211
G +A ++M + G P+ + ++L+ + + EA V++ M
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 14/261 (5%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G+ D + +ID + CL + F+ M + D V WN++ + + ++ A
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEA 539
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
LF E+Q P T+ M+ + G + ++ +GL N L+D+
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPS 184
Y K G DA + + S +N++I++YA G +A+ KM +EG++P+
Sbjct: 600 YAKCGSPEDAHKAFDSAAS----RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 185 LLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYE 244
+ +++A + + M ++P+ Y ++ L R + +K + E
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 245 EMVSSGCTPDRKARAMLRSAL 265
+M P + A + RS L
Sbjct: 716 KM------PTKPAAIVWRSLL 730
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 5 GVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRA 64
G++ D NV+ID++ K + A F M ++ I ++W TL+ + + H A
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI----ISWTTLLSGYKQNALHKEA 334
Query: 65 EELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDV 124
ELF M + G P + + ++ S + + + L ++ +L+D+
Sbjct: 335 MELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 125 YGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLS---DQAVNAFRKMTAEGL 181
Y K DA + ++ + ++NA+I Y++ G +A+N FR M +
Sbjct: 395 YAKCDCLTDARKVFDIFAA----ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 182 KPSLLALNSLINA 194
+PSLL SL+ A
Sbjct: 451 RPSLLTFVSLLRA 463
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 7/188 (3%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+PD + M+ G + ++L + + N L+D + K G + A +
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
F + V+ +N +I+S + + +L +M S+G+ PN +TF ++
Sbjct: 612 AFDSAASRD----VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
+G D L+ E++ G +P Y +++ + G ++A KM KP+ +
Sbjct: 668 HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAI 724
Query: 187 ALNSLINA 194
SL++
Sbjct: 725 VWRSLLSG 732
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 14/190 (7%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N +I ++ A+ E+M+SE I P+ +T+ ++ AG + + F+ M
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFN 132
+ G P Y M++ +G + ++ +L+ +M ++ P A+ + +L+ K+G
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK---PAAIVWRSLLSGCAKAGN-- 738
Query: 133 DALECLEVLKSMGFKPTPT---MYNALINAYAQRGLSDQAVNAFRKMTAEGL--KP--SL 185
+E E M P + L N YA +G+ +A +M EG+ +P S
Sbjct: 739 --VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Query: 186 LALNSLINAF 195
+ +N ++ F
Sbjct: 797 IGINKEVHIF 806
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 8/191 (4%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G D + ++ID + K +D+A F+ + + TVTW T+I K G
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK----STVTWTTMISGCVKMGRSYV 232
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVD 123
+ +LF ++ + P + ++++ + + + GL +A L+D
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 124 VYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKP 183
Y K GR + ++ M K + + L++ Y Q L +A+ F M+ GLKP
Sbjct: 293 SYVKCGR---VIAAHKLFNGMPNKNIIS-WTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 184 SLLALNSLINA 194
+ A +S++ +
Sbjct: 349 DMYACSSILTS 359
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 14 NVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQ 73
N MID + K +D A F+ M D ++W LI + + G + A ELF+ +
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPER----DVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 74 KGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFND 133
K ++ + M+ K + + RM+ G+ + VT + + G
Sbjct: 244 KD----MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 134 ALECLEVLKSMGFKPTP--TMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSL 191
A +++ + G+ P+ + +ALI+ Y++ G ++AVN F M ++ +S+
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN----NKNVFTYSSM 355
Query: 192 INAFGEDRRDPEAFAVLQYM-KENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSS- 249
I R EA + YM + +++P+ VT+ + A + V++ M +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 250 GCTPDR 255
G P R
Sbjct: 416 GVQPTR 421
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 40/280 (14%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLID------------- 53
+PD +N MI + K +C + + ML E + PD+ T+ L++
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155
Query: 54 -CHCKAGYHDRAEELF-QEMQQKGYSPC-----------------VLTYNIMINSMGAQE 94
HC L+ Q K YS C V ++N+MI+ +
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 95 KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYN 154
++++ +LL M+ + P +VT ++ K + E + +P+ + N
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 155 ALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEN 214
AL+NAYA G D AV FR M A +++ S++ + E A M
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 215 DLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVSSGCTPD 254
D +++T ++ +R F++ ++ EM S+G PD
Sbjct: 332 DR----ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 31/279 (11%)
Query: 7 QPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEE 66
+P N +++ + +D A+ F M + D ++W +++ + + G A
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLART 323
Query: 67 LFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
F +M + +++ IMI+ +++ ++ MQS G++P+ T +++
Sbjct: 324 YFDQMPVRDR----ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 127 KSGRFNDALECLEVLKSM----GFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLK 182
G +LE E +K+ K + NALI+ Y + G S++A F M +
Sbjct: 380 HLG----SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD----Q 431
Query: 183 PSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR---VDKFHKV 239
+++ + + EA V M++ +QPD +TY ++ A VD+ K
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 240 PA-------VYEEMVSSGCTPDRKARA-MLRSALRYMRQ 270
A + +V GC D RA +++ A +R+
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 45/247 (18%)
Query: 9 DRHFYNVMIDTFGKFNCLDHAMATFERMLS------------------------------ 38
DR + +MID + + C + ++ F M S
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 39 -----EEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQ 93
+I+ D V N LID + K G ++A+++F +M Q+ T+ M+ +
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK----FTWTAMVVGLANN 447
Query: 94 EKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKS-MGFKPTPTM 152
+ + + +MQ + P+ +T+ ++ SG + A + ++S +P+
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 153 YNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMK 212
Y +++ + GL +A RKM + P+ + +L+ A + E A L K
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVWGALLGA--SRLHNDEPMAELAAKK 562
Query: 213 ENDLQPD 219
+L+PD
Sbjct: 563 ILELEPD 569
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 12 FYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEM 71
+NVMID + + A F++M + V+WNT+I + G+ A E+F+EM
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 72 QQKGYSPCVLTYNIM---INSMGAQE--KWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYG 126
++ P +T + I+ +G+ E +W L + G+ + V + L+D+Y
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEW-----LHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 127 KSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
K G A+ E L + ++A+IN +A G + A++ F KM G++PS +
Sbjct: 321 KCGIIEKAIHVFERLP----RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKEND-LQPDVVTYTTLMKALIR 232
A +L+ A E M D L+P + Y ++ L R
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
+ V WN +ID + + G A LF +M+Q+ V+++N MI+ + ++
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTMISGYSLNGFFKDAVEVF 262
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVL----KSMGFKPTPTMYNALINA 159
M+ + PN VT +++ + G +LE E L + G + + +ALI+
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLG----SLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 160 YAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
Y++ G+ ++A++ F ++ E +++ +++IN F + +A M++ ++P
Sbjct: 319 YSKCGIIEKAIHVFERLPRE----NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 220 VVTYTTLMKALIRVDKFHKVPAVYEEMVSS----------GCTPDRKARAML 261
V Y L+ A + + +MVS GC D R+ L
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 426
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 2 KSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYH 61
+ +G++ D + +ID + K ++ A+ FER+ E + +TW+ +I+ G
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV----ITWSAMINGFAIHGQA 356
Query: 62 DRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQS-QGLLPNAVTFTT 120
A + F +M+Q G P + Y ++ + ++ ++M S GL P +
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRG---LSDQAVNAFRKMT 177
+VD+ G+SG ++A E + +M KP ++ AL+ A +G + + N M
Sbjct: 417 MVDLLGRSGLLDEA---EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
Query: 178 AEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPD 219
A +L N + E + MKE D++ D
Sbjct: 474 PHDSG----AYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 15 VMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQK 74
+++ + N D A+ + + DTV +N +I G + A+ L +EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 75 GYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDA 134
G P V+TY MIN K D L M + N+VT++ +++ KSG A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 135 LECL-EVLKSMG---FKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNS 190
LE L E+ K G P Y +I A+ ++ ++A+ +M G P+ +
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 191 LINAFGEDRRDPEAFAVL--QYMKENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEEMVS 248
LI E+ D +A + L + +K + +++ +LIR+ ++ + ++ M+
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLS-ECFSSATVSLIRMKRWEEAEKIFRLMLV 373
Query: 249 SGCTPD 254
G PD
Sbjct: 374 RGVRPD 379
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 6 VQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAE 65
V D YN++I F L+ A + M + PD +T+ ++I+ +C AG D A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 66 ELFQEMQQKGYSPCVL---TYNIMINSMGAQEKWDQVSDLLTRMQSQ---GLL-PNAVTF 118
L +EM + CVL TY+ ++ + ++ +LL M+ + GL+ PNAVT+
Sbjct: 221 RLAKEMSKH---DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 119 TTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTA 178
T ++ + + R +AL L+ + + G P LI + +D+ V A K+
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE---NDEDVKALSKLID 334
Query: 179 EGLKPSLLALNSLIN----AFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVD 234
+ +K ++L+ + + +R EA + + M ++PD + + + + L ++
Sbjct: 335 KLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLE 394
Query: 235 KFHKVPAVYEEM 246
++ +Y+E+
Sbjct: 395 RYLDCFLLYQEI 406
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 107/225 (47%), Gaps = 5/225 (2%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M G+ PD Y MI+ + +D A + M + ++VT++ +++ CK+G
Sbjct: 191 MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 61 HDRAEELFQEMQQKG----YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAV 116
+RA EL EM+++ SP +TY ++I + + + ++ +L RM ++G +PN V
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 117 TFTTLVDVYGKSGRFNDAL-ECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRK 175
T L+ ++ AL + ++ L +G +++ + + ++A FR
Sbjct: 311 TACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Query: 176 MTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDV 220
M G++P LA + + R + F + Q +++ D++ +
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTI 415
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 114 NAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAF 173
+ V + ++ ++ G N A ++ + +G P Y ++IN Y G D A
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 174 RKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKEND----LQPDVVTYTTLMKA 229
++M+ + + + ++ + A +L M++ D + P+ VTYT +++A
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 230 LIRVDKFHKVPAVYEEMVSSGCTPDRKARAML 261
+ + V + M + GC P+R +L
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVL 315
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 44 DTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLL 103
++VTWNT+ID + ++G D A ++F +M ++ ++++ MIN + ++
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERD----LISWTAMINGFVKKGYQEEALLWF 194
Query: 104 TRMQSQGLLPNAVTFTTLVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQR 163
MQ G+ P+ V ++ G + L + S FK + N+LI+ Y +
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 164 GLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTY 223
G + A F M K ++++ NS+I F + E+ + M+E +PD VT+
Sbjct: 255 GCVEFARQVFYNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 224 TTLMKALIRV 233
T + A V
Sbjct: 311 TGALTACSHV 320
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N MID + + +D+A F++M D ++W +I+ K GY + A F+EMQ
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 73 QKGYSPCVLTYNIMINSMGAQEKWDQVSDLL---TRMQSQGLLPNAVTFTTLVDVYGKSG 129
G P Y +I ++ A +S L + SQ N +L+D+Y + G
Sbjct: 199 ISGVKP---DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 255
Query: 130 RFNDALECLEVLKSMGF---KPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
C+E + + + K T +N++I +A G + +++ FRKM +G KP +
Sbjct: 256 -------CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMK-ENDLQPDVVTYTTLMKALIRVDKFHKVPAVYEE 245
+ A E Q MK + + P + Y L+ R + + +
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 246 M 246
M
Sbjct: 369 M 369
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 1 MKSNGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGY 60
M+ +GV+PD ++ L + +LS++ + + N+LID +C+ G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 61 HDRAEELFQEMQQKGYSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
+ A ++F M+++ V+++N +I A + +MQ +G P+AVTFT
Sbjct: 257 VEFARQVFYNMEKR----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTM--YNALINAYAQRGLSDQAVNAFRKMTA 178
+ G + L +++K ++ +P + Y L++ Y++ G + A+ + M
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKC-DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP- 370
Query: 179 EGLKPSLLALNSLINA 194
+KP+ + + SL+ A
Sbjct: 371 --MKPNEVVIGSLLAA 384
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 27 DHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKGYSPCVLTYNIM 86
+HA +R ++ TV+W + I+ + G A + F +M G P +T+ +
Sbjct: 19 NHANPKIQRH-NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIAL 77
Query: 87 INSMGA-QEKWDQVSDLLTRMQSQ-GLLPNAVTF-TTLVDVYGKSGRFNDALECLEVLKS 143
++ G + + DLL + GL N V T ++ +Y K GRF A + ++
Sbjct: 78 LSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED 137
Query: 144 MGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLLALNSLINAFGEDRRDPE 203
+N +I+ Y + G D A F KM + L++ ++IN F + E
Sbjct: 138 ----KNSVTWNTMIDGYMRSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEE 189
Query: 204 AFAVLQYMKENDLQPDVVTYTTLMKA 229
A + M+ + ++PD V + A
Sbjct: 190 ALLWFREMQISGVKPDYVAIIAALNA 215
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 13 YNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQ 72
+N ++D + K + A F+ M SE D VTW+++ID + K G +++A E+F +M
Sbjct: 177 WNSILDAYAKSGDVVSARLVFDEM-SER---DVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 73 QKGYSPC----VLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTF-TTLVDVYGK 127
+ G S +++ +GA + V + + LP V T+L+D+Y K
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH----LPLTVILQTSLIDMYAK 288
Query: 128 SGRFNDALECLEVLKSMGFKPTPT-MYNALINAYAQRGLSDQAVNAFRKMTAEGLKPSLL 186
G DA V K T M+NA+I A G +++ F KM + P +
Sbjct: 289 CGSIGDA---WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 345
Query: 187 ALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIR 232
L+ A EA+ + +KE+ +P Y ++ L R
Sbjct: 346 TFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSR 391
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 15/265 (5%)
Query: 4 NGVQPDRHFYNVMIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDR 63
+G++ D N +I +G F D A A ++ E + VTWN+++D + K+G
Sbjct: 137 SGLEWDLFICNTLIHMYGSFR--DQASA--RKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 64 AEELFQEMQQKGYSPCVLTYNIMINSM---GAQEKWDQVSDLLTRMQSQGLLPNAVTFTT 120
A +F EM ++ V+T++ MI+ G K ++ D + RM S N VT +
Sbjct: 193 ARLVFDEMSERD----VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK--ANEVTMVS 246
Query: 121 LVDVYGKSGRFNDALECLEVLKSMGFKPTPTMYNALINAYAQRGLSDQAVNAFRKMTAEG 180
++ G N + + T + +LI+ YA+ G A + F + + +
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK- 305
Query: 181 LKPSLLALNSLINAFGEDRRDPEAFAVLQYMKENDLQPDVVTYTTLMKALIRVDKFHKVP 240
+ L N++I E+ + M+E+ + PD +T+ L+ A +
Sbjct: 306 -ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364
Query: 241 AVYEEMVSSGCTPDRKARAMLRSAL 265
++ + SG P + A + L
Sbjct: 365 HFFKSLKESGAEPKSEHYACMVDVL 389
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 16 MIDTFGKFNCLDHAMATFERMLSEEIRPDTVTWNTLIDCHCKAGYHDRAEELFQEMQQKG 75
+ID + K + A + F R +E D + WN +I G+ + +LF +M++
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKE--TDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 76 YSPCVLTYNIMINSMGAQEKWDQVSDLLTRMQSQGLLPNAVTFTTLVDVYGKSGRFNDAL 135
P +T+ ++ + + ++ G P + + +VDV ++G DA
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 136 ECLEVLKSMGFKPTPTMYNALINAYAQRG 164
+ + M KPT +M AL+N G
Sbjct: 400 D---FISEMPIKPTGSMLGALLNGCINHG 425