Miyakogusa Predicted Gene
- Lj1g3v2280630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2280630.1 Non Chatacterized Hit- tr|D7U522|D7U522_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.47,0.00000000000006,seg,NULL,CUFF.28784.1
(452 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G42430.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 617 e-177
AT1G42430.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 592 e-169
AT3G55760.3 | Symbols: | unknown protein; EXPRESSED IN: 16 plan... 201 1e-51
AT3G55760.2 | Symbols: | unknown protein; LOCATED IN: chloropla... 201 1e-51
AT3G55760.1 | Symbols: | unknown protein; LOCATED IN: chloropla... 201 1e-51
>AT1G42430.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins
in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14;
Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes -
56 (source: NCBI BLink). | chr1:15891512-15894322
FORWARD LENGTH=426
Length = 426
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/436 (73%), Positives = 350/436 (80%), Gaps = 32/436 (7%)
Query: 1 MAASSRGFSTAQFDFKLRARRLNVVAASLLLPSNHVLVESSCSXXXXXXTCFFDVDRA-- 58
MAASS + + D KLR R V A SNH L T +F D+A
Sbjct: 4 MAASS---AISLLDIKLR--RFGVGA------SNHEL----------RLTKWFKGDQAGA 42
Query: 59 --RLRCCCSDSVTPIRRASGAGNGGDRSEEWRLDPKKNPHIHRMRVQXXXXXXXXXXXXX 116
R C +D + PIRR+ ++SEE R D K + H ++
Sbjct: 43 PTRRFTCFADMLAPIRRS-------EKSEERRFDQKMSAHGAGIKTSSSAVPFASPKSRF 95
Query: 117 XLKQEKFYPRCTPRNSGPQSRDTPPKRDTGIANEKDWGISLLNENVNESGTNEDGSTWYR 176
KQEKFYPRCTPR +GPQSRDTPPKRDTGIANEKDWGI LLNENVNE+GTNEDGS+W+R
Sbjct: 96 LSKQEKFYPRCTPRLTGPQSRDTPPKRDTGIANEKDWGIDLLNENVNEAGTNEDGSSWFR 155
Query: 177 ENGEELGENGYRCRWTRMGGQSHDGSSEWKETWWEKSDWTGYKELGVEKSGRNSEGDSWW 236
E+G +LG+NGYRCRW+RMGG+SHDGSSEW ETWWEKSDWTGYKELGVEKSG+NSEGDSWW
Sbjct: 156 ESGHDLGDNGYRCRWSRMGGRSHDGSSEWTETWWEKSDWTGYKELGVEKSGKNSEGDSWW 215
Query: 237 ETWQENLQQDEWSNIARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN 296
ETWQE L QDEWSN+ARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN
Sbjct: 216 ETWQEVLHQDEWSNLARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN 275
Query: 297 EQSWWEKWGEHYDGRESVLKWTDKWAETELGTKWGDKWEERFFKGIGSRHGETWHVSPSS 356
EQSWWEKWGEHYDGR SVLKWTDKWAETELGTKWGDKWEE+FF GIGSR GETWHVSP+S
Sbjct: 276 EQSWWEKWGEHYDGRGSVLKWTDKWAETELGTKWGDKWEEKFFSGIGSRQGETWHVSPNS 335
Query: 357 ERWSRTWGEEHFGNGKVHKYGNSTTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSI 416
+RWSRTWGEEHFGNGKVHKYG STTGESWDIVVDEETYYEAEPHYGWADVVGDS+QLLSI
Sbjct: 336 DRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSTQLLSI 395
Query: 417 EPRERPPGVFPNLDFG 432
+PRERPPGV+PNL+FG
Sbjct: 396 QPRERPPGVYPNLEFG 411
>AT1G42430.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G55760.3). |
chr1:15891512-15894322 FORWARD LENGTH=409
Length = 409
Score = 592 bits (1525), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/436 (71%), Positives = 342/436 (78%), Gaps = 49/436 (11%)
Query: 1 MAASSRGFSTAQFDFKLRARRLNVVAASLLLPSNHVLVESSCSXXXXXXTCFFDVDRA-- 58
MAASS + + D KLR R V A SNH L T +F D+A
Sbjct: 4 MAASS---AISLLDIKLR--RFGVGA------SNHEL----------RLTKWFKGDQAGA 42
Query: 59 --RLRCCCSDSVTPIRRASGAGNGGDRSEEWRLDPKKNPHIHRMRVQXXXXXXXXXXXXX 116
R C +D + PIRR+ ++SEE R D K + H ++
Sbjct: 43 PTRRFTCFADMLAPIRRS-------EKSEERRFDQKMSAHGAGIKTSSSA---------- 85
Query: 117 XLKQEKFYPRCTPRNSGPQSRDTPPKRDTGIANEKDWGISLLNENVNESGTNEDGSTWYR 176
P +P+ +GPQSRDTPPKRDTGIANEKDWGI LLNENVNE+GTNEDGS+W+R
Sbjct: 86 -------VPFASPKLTGPQSRDTPPKRDTGIANEKDWGIDLLNENVNEAGTNEDGSSWFR 138
Query: 177 ENGEELGENGYRCRWTRMGGQSHDGSSEWKETWWEKSDWTGYKELGVEKSGRNSEGDSWW 236
E+G +LG+NGYRCRW+RMGG+SHDGSSEW ETWWEKSDWTGYKELGVEKSG+NSEGDSWW
Sbjct: 139 ESGHDLGDNGYRCRWSRMGGRSHDGSSEWTETWWEKSDWTGYKELGVEKSGKNSEGDSWW 198
Query: 237 ETWQENLQQDEWSNIARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN 296
ETWQE L QDEWSN+ARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN
Sbjct: 199 ETWQEVLHQDEWSNLARIERSAQKQAKSGTENAGWYEKWWEKYDAKGWTEKGAHKYGRLN 258
Query: 297 EQSWWEKWGEHYDGRESVLKWTDKWAETELGTKWGDKWEERFFKGIGSRHGETWHVSPSS 356
EQSWWEKWGEHYDGR SVLKWTDKWAETELGTKWGDKWEE+FF GIGSR GETWHVSP+S
Sbjct: 259 EQSWWEKWGEHYDGRGSVLKWTDKWAETELGTKWGDKWEEKFFSGIGSRQGETWHVSPNS 318
Query: 357 ERWSRTWGEEHFGNGKVHKYGNSTTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSI 416
+RWSRTWGEEHFGNGKVHKYG STTGESWDIVVDEETYYEAEPHYGWADVVGDS+QLLSI
Sbjct: 319 DRWSRTWGEEHFGNGKVHKYGKSTTGESWDIVVDEETYYEAEPHYGWADVVGDSTQLLSI 378
Query: 417 EPRERPPGVFPNLDFG 432
+PRERPPGV+PNL+FG
Sbjct: 379 QPRERPPGVYPNLEFG 394
>AT3G55760.3 | Symbols: | unknown protein; EXPRESSED IN: 16 plant
structures; EXPRESSED DURING: 10 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G42430.2). | chr3:20700648-20702886 FORWARD
LENGTH=578
Length = 578
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 175/279 (62%), Gaps = 19/279 (6%)
Query: 155 ISLLNENVNES---GTNEDGSTWYRENGEELGENGYRCRWTRMGGQSHDGSSEWKETWWE 211
++ + ++++ES G +EDG W+++ G E +G CRWT + G + DG EW++ +WE
Sbjct: 297 VARVLDSLDESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWE 356
Query: 212 KSDWTGYKELGVEKSGRNSEGDSWWETWQENLQQDEWSNIARIERSAQKQAKSGTENAGW 271
SD G+KELG EKSGR++ G+ W E W+E++ Q+ + + +E++A K KSG + W
Sbjct: 357 ASDDFGFKELGSEKSGRDATGNVWREFWRESMSQE--NGVVHMEKTADKWGKSGQGDE-W 413
Query: 272 YEKWWEKYDAKGWTEKGAHKYGRLNEQS---------WWEKWGEHYDGRESVLKWTDKWA 322
EKWWE YDA G +EK AHK+ ++ + W E+WGE YDG+ K+TDKWA
Sbjct: 414 QEKWWEHYDATGKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWA 473
Query: 323 ETELG---TKWGDKWEERFFKGI-GSRHGETWHVSPSSERWSRTWGEEHFGNGKVHKYGN 378
E +G KWGDKW+E F G + GETW +RW+R+WGE H G+G VHKYG
Sbjct: 474 ERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGK 533
Query: 379 STTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSIE 417
S++GE WD V +ET+YE PH+G+ +S QL +++
Sbjct: 534 SSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVK 572
>AT3G55760.2 | Symbols: | unknown protein; LOCATED IN: chloroplast;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast
hits to 125 proteins in 40 species: Archae - 0; Bacteria
- 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0;
Other Eukaryotes - 64 (source: NCBI BLink). |
chr3:20700648-20702886 FORWARD LENGTH=578
Length = 578
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 175/279 (62%), Gaps = 19/279 (6%)
Query: 155 ISLLNENVNES---GTNEDGSTWYRENGEELGENGYRCRWTRMGGQSHDGSSEWKETWWE 211
++ + ++++ES G +EDG W+++ G E +G CRWT + G + DG EW++ +WE
Sbjct: 297 VARVLDSLDESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWE 356
Query: 212 KSDWTGYKELGVEKSGRNSEGDSWWETWQENLQQDEWSNIARIERSAQKQAKSGTENAGW 271
SD G+KELG EKSGR++ G+ W E W+E++ Q+ + + +E++A K KSG + W
Sbjct: 357 ASDDFGFKELGSEKSGRDATGNVWREFWRESMSQE--NGVVHMEKTADKWGKSGQGDE-W 413
Query: 272 YEKWWEKYDAKGWTEKGAHKYGRLNEQS---------WWEKWGEHYDGRESVLKWTDKWA 322
EKWWE YDA G +EK AHK+ ++ + W E+WGE YDG+ K+TDKWA
Sbjct: 414 QEKWWEHYDATGKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWA 473
Query: 323 ETELG---TKWGDKWEERFFKGI-GSRHGETWHVSPSSERWSRTWGEEHFGNGKVHKYGN 378
E +G KWGDKW+E F G + GETW +RW+R+WGE H G+G VHKYG
Sbjct: 474 ERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGK 533
Query: 379 STTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSIE 417
S++GE WD V +ET+YE PH+G+ +S QL +++
Sbjct: 534 SSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVK 572
>AT3G55760.1 | Symbols: | unknown protein; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins
in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19;
Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes -
64 (source: NCBI BLink). | chr3:20700648-20702886
FORWARD LENGTH=578
Length = 578
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 175/279 (62%), Gaps = 19/279 (6%)
Query: 155 ISLLNENVNES---GTNEDGSTWYRENGEELGENGYRCRWTRMGGQSHDGSSEWKETWWE 211
++ + ++++ES G +EDG W+++ G E +G CRWT + G + DG EW++ +WE
Sbjct: 297 VARVLDSLDESSTHGVSEDGLKWWKQTGVEKRPDGVVCRWTMIRGVTADGVVEWQDKYWE 356
Query: 212 KSDWTGYKELGVEKSGRNSEGDSWWETWQENLQQDEWSNIARIERSAQKQAKSGTENAGW 271
SD G+KELG EKSGR++ G+ W E W+E++ Q+ + + +E++A K KSG + W
Sbjct: 357 ASDDFGFKELGSEKSGRDATGNVWREFWRESMSQE--NGVVHMEKTADKWGKSGQGDE-W 413
Query: 272 YEKWWEKYDAKGWTEKGAHKYGRLNEQS---------WWEKWGEHYDGRESVLKWTDKWA 322
EKWWE YDA G +EK AHK+ ++ + W E+WGE YDG+ K+TDKWA
Sbjct: 414 QEKWWEHYDATGKSEKWAHKWCSIDRNTPLDAGHAHVWHERWGEKYDGQGGSTKYTDKWA 473
Query: 323 ETELG---TKWGDKWEERFFKGI-GSRHGETWHVSPSSERWSRTWGEEHFGNGKVHKYGN 378
E +G KWGDKW+E F G + GETW +RW+R+WGE H G+G VHKYG
Sbjct: 474 ERWVGDGWDKWGDKWDENFNPSAQGVKQGETWWEGKHGDRWNRSWGEGHNGSGWVHKYGK 533
Query: 379 STTGESWDIVVDEETYYEAEPHYGWADVVGDSSQLLSIE 417
S++GE WD V +ET+YE PH+G+ +S QL +++
Sbjct: 534 SSSGEHWDTHVPQETWYEKFPHFGFFHCFDNSVQLRAVK 572