Miyakogusa Predicted Gene

Lj1g3v2267290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2267290.1 Non Chatacterized Hit- tr|I1KSN1|I1KSN1_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,80.56,0.00000000008,seg,NULL,gene.g32852.t1.1
         (94 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu...    48   1e-06
AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu...    48   1e-06
AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leu...    48   2e-06
AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper ...    47   2e-06

>AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
           Homeobox-leucine zipper family protein / lipid-binding
           START domain-containing protein | chr1:19409913-19413961
           REVERSE LENGTH=837
          Length = 837

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/35 (54%), Positives = 28/35 (80%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSYR 35
           +A++PS +S+Q+G +   G+PEA TL RWIC+SYR
Sbjct: 670 LALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 704


>AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
           Homeobox-leucine zipper family protein / lipid-binding
           START domain-containing protein | chr1:19409913-19413961
           REVERSE LENGTH=836
          Length = 836

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/35 (54%), Positives = 28/35 (80%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSYR 35
           +A++PS +S+Q+G +   G+PEA TL RWIC+SYR
Sbjct: 669 LALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 703


>AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 |
           Homeobox-leucine zipper family protein / lipid-binding
           START domain-containing protein | chr1:19410118-19413961
           REVERSE LENGTH=794
          Length = 794

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 28/35 (80%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSYR 35
           +A++PS +S+Q+G +   G+PEA TL RWIC+SYR
Sbjct: 669 LALSPSHISSQVGLRTPLGTPEAQTLARWICQSYR 703


>AT5G60690.1 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper
           family protein / lipid-binding START domain-containing
           protein | chr5:24397734-24401933 FORWARD LENGTH=842
          Length = 842

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 26/34 (76%)

Query: 1   MAIAPSRVSTQMGPKPLPGSPEAVTLVRWICRSY 34
           MAI+PS +S  +G K  PGSPEAVTL +WI +SY
Sbjct: 670 MAISPSGISPSLGSKLSPGSPEAVTLAQWISQSY 703